>ref|XM_482554.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1194

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 306 gccaaggagtcatggcatcacaagctacggcggcttgaaggca 348
           |||||||| ||||||| ||||||||||| | ||| ||||||||
Sbjct: 57  gccaaggaatcatggcttcacaagctacagtggcctgaaggca 99

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 306      gccaaggagtcatggcatcacaagctacggcggcttgaaggca 348
                |||||||| ||||||| ||||||||||| | ||| ||||||||
Sbjct: 21048833 gccaaggaatcatggcttcacaagctacagtggcctgaaggca 21048791

>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0431A03
          Length = 149500

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 306    gccaaggagtcatggcatcacaagctacggcggcttgaaggca 348
              |||||||| ||||||| ||||||||||| | ||| ||||||||
Sbjct: 115008 gccaaggaatcatggcttcacaagctacagtggcctgaaggca 114966

>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0413H11
          Length = 147655

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 306   gccaaggagtcatggcatcacaagctacggcggcttgaaggca 348
             |||||||| ||||||| ||||||||||| | ||| ||||||||
Sbjct: 20043 gccaaggaatcatggcttcacaagctacagtggcctgaaggca 20001

>emb|AJ937769.1| Uncultured epsilon proteobacterium fosmid clone b1dcf1.3.c08
          Length = 38167

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 15    caagaaacggagcaaaggttga 36
             ||||||||||||||||||||||
Sbjct: 11043 caagaaacggagcaaaggttga 11064

>gb|AC102418.9| Mus musculus chromosome 3, clone RP24-499L10, complete sequence
          Length = 208274

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 267    catgacttcagccagtgctcaggc 290
              ||||||||||||||||||| ||||
Sbjct: 208173 catgacttcagccagtgctgaggc 208196

>ref|XM_744196.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g01530)
           partial mRNA
          Length = 1140

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 131 cccctacttcatcctaggcctctt 154
           |||||||||||||| |||||||||
Sbjct: 897 cccctacttcatcccaggcctctt 920

>ref|XM_814670.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506825.230) partial mRNA
          Length = 3453

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 gaaggcatcgtcgtcgtcat 361
           ||||||||||||||||||||
Sbjct: 939 gaaggcatcgtcgtcgtcat 920

>gb|AC163445.3| Mus musculus chromosome 3, clone RP24-304A4, complete sequence
          Length = 175181

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 267   catgacttcagccagtgctcaggc 290
             ||||||||||||||||||| ||||
Sbjct: 50472 catgacttcagccagtgctgaggc 50495

>emb|BX001008.3| Mouse DNA sequence from clone RP24-143D17 on chromosome 11 Contains
             part of the 3'UTR of the U2af1-rs1 gene for U2 small
             nuclear ribonucleoprotein auxiliary factor (U2AF) 1
             (related sequence 1), the 5' end of the Murr1 gene for
             U2af1-rs1 region 1, the Cct4 gene for chaperonin subunit 4
             (delta), the 5' end of gene FLJ13305 and three CpG
             islands, complete sequence
          Length = 46341

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 267   catgacttcagccagtgctcaggc 290
             ||||||||||||||||||| ||||
Sbjct: 10803 catgacttcagccagtgctgaggc 10826

>emb|AL731818.6| Mouse DNA sequence from clone RP23-401L13 on chromosome 11 Contains two
              novel genes, the AI503894 gene for expressed sequence
              AI503894, a laminin receptor 1 (ribosomal protein
              SA)(Lamr1) pseudogene and a CpG island, complete sequence
          Length = 201664

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 267    catgacttcagccagtgctcaggc 290
              ||||||||||||||||||| ||||
Sbjct: 181638 catgacttcagccagtgctgaggc 181661

>emb|BX255966.4| Mouse DNA sequence from clone RP23-296F5 on chromosome 4, complete
            sequence
          Length = 19577

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 267  catgacttcagccagtgctcaggc 290
            ||||||||||||||||||| ||||
Sbjct: 3462 catgacttcagccagtgctgaggc 3439

>gb|AC134914.5| Mus musculus BAC clone RP23-227C5 from 9, complete sequence
          Length = 206831

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 267   catgacttcagccagtgctcaggc 290
             ||||||||||||||||||| ||||
Sbjct: 43925 catgacttcagccagtgctgaggc 43902

>gb|AC141637.3| Mus musculus BAC clone RP23-424D5 from 9, complete sequence
          Length = 183859

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 267   catgacttcagccagtgctcaggc 290
             ||||||||||||||||||| ||||
Sbjct: 33914 catgacttcagccagtgctgaggc 33937

>emb|AL591606.4| Mouse DNA sequence from clone RP23-272O14 on chromosome 2, complete
              sequence
          Length = 179373

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 267    catgacttcagccagtgctcaggc 290
              ||||||||||||||||||| ||||
Sbjct: 134656 catgacttcagccagtgctgaggc 134633


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,187,100
Number of Sequences: 3902068
Number of extensions: 2187100
Number of successful extensions: 41549
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41497
Number of HSP's gapped (non-prelim): 52
length of query: 364
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 342
effective length of database: 17,147,199,772
effective search space: 5864342322024
effective search space used: 5864342322024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)