| Clone Name | bast43a07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470053.1| Oryza sativa (japonica cultivar-group), mRNA Length = 493 Score = 131 bits (66), Expect = 2e-27 Identities = 120/138 (86%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggtccgcgcatcggtgaagcggttgtgcagcttctgcaa 126 ||||| ||||| |||||||||||| ||||| |||||||||||| ||||| | |||||| Sbjct: 35 gaggaagaagaagaagatgaaggttcgcgcgtcggtgaagcggctgtgcgcgtactgcaa 94 Query: 127 ggtggtgaagcgccggggcatcgtcttcatccactgcacctccaaccagaagcacaagca 186 ||||||||||||| |||||||||| |||||||| |||| ||||| ||||||||||| Sbjct: 95 ggtggtgaagcgcaggggcatcgtgttcatccagtgcaaggccaacgccaagcacaagca 154 Query: 187 gcgccagggcttctccac 204 |||||||||||||||||| Sbjct: 155 gcgccagggcttctccac 172
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 131 bits (66), Expect = 2e-27 Identities = 120/138 (86%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaaggtccgcgcatcggtgaagcggttgtgcagcttctgcaa 126 ||||| ||||| |||||||||||| ||||| |||||||||||| ||||| | |||||| Sbjct: 33698418 gaggaagaagaagaagatgaaggttcgcgcgtcggtgaagcggctgtgcgcgtactgcaa 33698359 Query: 127 ggtggtgaagcgccggggcatcgtcttcatccactgcacctccaaccagaagcacaagca 186 ||||||||||||| |||||||||| |||||||| |||| ||||| ||||||||||| Sbjct: 33698358 ggtggtgaagcgcaggggcatcgtgttcatccagtgcaaggccaacgccaagcacaagca 33698299 Query: 187 gcgccagggcttctccac 204 |||||||||||||||||| Sbjct: 33698298 gcgccagggcttctccac 33698281
>gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genomic sequence, complete sequence Length = 126862 Score = 131 bits (66), Expect = 2e-27 Identities = 120/138 (86%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaaggtccgcgcatcggtgaagcggttgtgcagcttctgcaa 126 ||||| ||||| |||||||||||| ||||| |||||||||||| ||||| | |||||| Sbjct: 69787 gaggaagaagaagaagatgaaggttcgcgcgtcggtgaagcggctgtgcgcgtactgcaa 69728 Query: 127 ggtggtgaagcgccggggcatcgtcttcatccactgcacctccaaccagaagcacaagca 186 ||||||||||||| |||||||||| |||||||| |||| ||||| ||||||||||| Sbjct: 69727 ggtggtgaagcgcaggggcatcgtgttcatccagtgcaaggccaacgccaagcacaagca 69668 Query: 187 gcgccagggcttctccac 204 |||||||||||||||||| Sbjct: 69667 gcgccagggcttctccac 69650
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 131 bits (66), Expect = 2e-27 Identities = 120/138 (86%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaaggtccgcgcatcggtgaagcggttgtgcagcttctgcaa 126 ||||| ||||| |||||||||||| ||||| |||||||||||| ||||| | |||||| Sbjct: 33788890 gaggaagaagaagaagatgaaggttcgcgcgtcggtgaagcggctgtgcgcgtactgcaa 33788831 Query: 127 ggtggtgaagcgccggggcatcgtcttcatccactgcacctccaaccagaagcacaagca 186 ||||||||||||| |||||||||| |||||||| |||| ||||| ||||||||||| Sbjct: 33788830 ggtggtgaagcgcaggggcatcgtgttcatccagtgcaaggccaacgccaagcacaagca 33788771 Query: 187 gcgccagggcttctccac 204 |||||||||||||||||| Sbjct: 33788770 gcgccagggcttctccac 33788753
>dbj|AK063320.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H01, full insert sequence Length = 546 Score = 131 bits (66), Expect = 2e-27 Identities = 120/138 (86%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggtccgcgcatcggtgaagcggttgtgcagcttctgcaa 126 ||||| ||||| |||||||||||| ||||| |||||||||||| ||||| | |||||| Sbjct: 85 gaggaagaagaagaagatgaaggttcgcgcgtcggtgaagcggctgtgcgcgtactgcaa 144 Query: 127 ggtggtgaagcgccggggcatcgtcttcatccactgcacctccaaccagaagcacaagca 186 ||||||||||||| |||||||||| |||||||| |||| ||||| ||||||||||| Sbjct: 145 ggtggtgaagcgcaggggcatcgtgttcatccagtgcaaggccaacgccaagcacaagca 204 Query: 187 gcgccagggcttctccac 204 |||||||||||||||||| Sbjct: 205 gcgccagggcttctccac 222
>gb|AY109291.1| Zea mays PCO081799 mRNA sequence Length = 571 Score = 131 bits (66), Expect = 2e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 74 aagaggaagatgaaggtccgcgcatcggtgaagcggttgtgcagcttctgcaaggtggtg 133 |||| ||||||||||||||| || |||||||||| ||||| | ||||||||||||||| Sbjct: 68 aagaagaagatgaaggtccgtgcggcggtgaagcgcctgtgccggttctgcaaggtggtg 127 Query: 134 aagcgccggggcatcgtcttcatccactgcacctccaaccagaagcacaagcagcgccag 193 ||||||||||| ||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 128 aagcgccggggaatcgtcttcgtccaatgcacggccaatgccaagcacaagcagcgccag 187 Query: 194 ggcttctccaccat 207 |||||||||||||| Sbjct: 188 ggcttctccaccat 201 Score = 56.0 bits (28), Expect = 9e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 270 cttccaaggcggccaggcaggacatgtcaacgaaattcaactggccgctgggtctagctg 329 |||| |||| ||| ||||| || ||||| | ||| ||||| |||| ||||||| |||||| Sbjct: 288 cttcgaaggtggcgaggcaagagatgtctatgaagttcaattggcggctgggtttagctg 347 Query: 330 ccgtgttcaagaatgg 345 || ||||||||||||| Sbjct: 348 ccctgttcaagaatgg 363
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 168 ccaaccagaagcacaagcagcgccagggct 197 |||||| ||||||||||||||||||||||| Sbjct: 233901 ccaacccgaagcacaagcagcgccagggct 233930
>ref|NM_100428.2| Arabidopsis thaliana unknown protein AT1G05490 mRNA, complete cds Length = 2369 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 66 cgaggaggaagaggaagatgaag 88 ||||||||||||||||||||||| Sbjct: 1076 cgaggaggaagaggaagatgaag 1054
>ref|XM_585363.2| PREDICTED: Bos taurus similar to Apg3p, transcript variant 1 (LOC508571), mRNA Length = 1535 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaagg 89 ||||||||||||||||||||||| Sbjct: 842 gaggaggaagaggaagatgaagg 864
>ref|XM_871919.1| PREDICTED: Bos taurus similar to Apg3p, transcript variant 3 (LOC508571), mRNA Length = 1308 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaagg 89 ||||||||||||||||||||||| Sbjct: 842 gaggaggaagaggaagatgaagg 864
>ref|XM_871822.1| PREDICTED: Bos taurus similar to Apg3p, transcript variant 2 (LOC508571), mRNA Length = 1435 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaagg 89 ||||||||||||||||||||||| Sbjct: 842 gaggaggaagaggaagatgaagg 864
>gb|BC030873.1| Mus musculus phosphodiesterase 4C, cAMP specific, mRNA (cDNA clone MGC:31320 IMAGE:4223352), complete cds Length = 3204 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaagg 89 ||||||||||||||||||||||| Sbjct: 2053 gaggaggaagaggaagatgaagg 2075
>gb|BC031152.1| Mus musculus phosphodiesterase 4C, cAMP specific, mRNA (cDNA clone IMAGE:4976346), with apparent retained intron Length = 2684 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaagg 89 ||||||||||||||||||||||| Sbjct: 1723 gaggaggaagaggaagatgaagg 1745
>emb|BX908813.1| Tetraodon nigroviridis Length = 75904 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 68 aggaggaagaggaagatgaaggt 90 ||||||||||||||||||||||| Sbjct: 17651 aggaggaagaggaagatgaaggt 17673
>gb|AC159620.2| Mus musculus BAC clone RP24-354K18 from chromosome 12, complete sequence Length = 155161 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaagg 89 ||||||||||||||||||||||| Sbjct: 91675 gaggaggaagaggaagatgaagg 91697
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I, complete sequence Length = 84203 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 66 cgaggaggaagaggaagatgaag 88 ||||||||||||||||||||||| Sbjct: 54366 cgaggaggaagaggaagatgaag 54388
>gb|AY609699.1| Sus scrofa clone Clu_26459.scr.msk.p1.Contig1, mRNA sequence Length = 1458 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaagg 89 ||||||||||||||||||||||| Sbjct: 779 gaggaggaagaggaagatgaagg 801
>ref|NM_201607.1| Mus musculus phosphodiesterase 4C, cAMP specific (Pde4c), mRNA Length = 3204 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaagg 89 ||||||||||||||||||||||| Sbjct: 2053 gaggaggaagaggaagatgaagg 2075
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete sequence Length = 103223 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 66 cgaggaggaagaggaagatgaag 88 ||||||||||||||||||||||| Sbjct: 3817 cgaggaggaagaggaagatgaag 3839
>ref|XM_638786.1| Dictyostelium discoideum phenylalanine-tRNA ligase (DDB0231330), partial mRNA Length = 1365 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 1013 gaggaggaagaggaagatgaag 992
>ref|XM_520459.1| PREDICTED: Pan troglodytes similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b; SNF2-alpha; SNF2-like 2; SNF2/SWI2-like protein 2; sucrose nonfermenting 2-like protein 2; global transcription activator homologous sequence ... (LOC464965), mRNA Length = 4418 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 4200 gaggaggaagaggaagatgaag 4221
>ref|XM_519860.1| PREDICTED: Pan troglodytes similar to DKFZP434I116 protein isoform 1 (LOC464288), mRNA Length = 5418 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 862 gaggaggaagaggaagatgaag 883
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 254479 gaggaggaagaggaagatgaag 254458
>gb|AC121149.12| Mus musculus chromosome 3, clone RP24-383A4, complete sequence Length = 172369 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 63038 gaggaggaagaggaagatgaag 63017
>gb|AC133874.10| Mus musculus chromosome 19, clone RP23-81N16, complete sequence Length = 215113 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 133396 gaggaggaagaggaagatgaag 133375
>ref|XM_613634.2| PREDICTED: Bos taurus similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b (LOC540904), mRNA Length = 5243 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 4138 gaggaggaagaggaagatgaag 4159
>ref|XM_421438.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 3632451O06 (LOC423545), mRNA Length = 2642 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 1929 gaggaggaagaggaagatgaag 1950
>ref|NM_015496.3| Homo sapiens KIAA1429 (KIAA1429), transcript variant 1, mRNA Length = 5786 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 839 gaggaggaagaggaagatgaag 860
>ref|XM_454622.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E14982g predicted mRNA Length = 1197 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 332 gaggaggaagaggaagatgaag 311
>ref|NM_183009.1| Homo sapiens KIAA1429 (KIAA1429), transcript variant 2, mRNA Length = 3642 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 839 gaggaggaagaggaagatgaag 860
>gb|AC154647.2| Mus musculus BAC clone RP23-283P8 from chromosome 17, complete sequence Length = 208252 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 167617 gaggaggaagaggaagatgaag 167596
>ref|XR_004634.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC674287), mRNA Length = 620 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 579 gaggaggaagaggaagatgaag 600
>ref|XR_004062.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC672904), mRNA Length = 620 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 579 gaggaggaagaggaagatgaag 600
>ref|XR_002228.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC668659), mRNA Length = 620 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 579 gaggaggaagaggaagatgaag 600
>gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosome 17, complete sequence Length = 147557 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 135317 gaggaggaagaggaagatgaag 135338
>ref|XM_569397.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNC00880) partial mRNA Length = 2531 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 1508 gaggaggaagaggaagatgaag 1529
>gb|AC122238.4| Mus musculus BAC clone RP23-143D4 from chromosome 10, complete sequence Length = 188476 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 82434 gaggaggaagaggaagatgaag 82455
>gb|AC122385.2| Mus musculus BAC clone RP24-72B22 from chromosome 1, complete sequence Length = 178821 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 10674 gaggaggaagaggaagatgaag 10695
>gb|AC144819.8| Mus musculus BAC clone RP23-162A11 from chromosome 14, complete sequence Length = 198432 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 95705 gaggaggaagaggaagatgaag 95726
>gb|AC095491.7| Rattus norvegicus 4 BAC CH230-7L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 293757 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 162524 gaggaggaagaggaagatgaag 162545
>gb|AY122621.1| Aedes aegypti Na+/H+ exchanger mRNA, complete cds Length = 3686 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 3604 gaggaggaagaggaagatgaag 3625
>ref|XM_791296.1| PREDICTED: Strongylocentrotus purpuratus similar to PR domain containing 10 isoform 4 (LOC591744), mRNA Length = 4209 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 1816 gaggaggaagaggaagatgaag 1837
>emb|AL138755.13| Human DNA sequence from clone RP11-48M17 on chromosome 9p24.1-24.3 Contains the 3' end of the SMARCA2 gene for SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily a member 2 (SNF2LA), complete sequence Length = 160038 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 39860 gaggaggaagaggaagatgaag 39881
>emb|CR857300.1| Pongo pygmaeus mRNA; cDNA DKFZp469F2022 (from clone DKFZp469F2022) Length = 1739 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 677 gaggaggaagaggaagatgaag 698
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 1334966 gaggaggaagaggaagatgaag 1334945
>gb|BC068252.1| Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, mRNA (cDNA clone IMAGE:4822434), containing frame-shift errors Length = 5616 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 4550 gaggaggaagaggaagatgaag 4571
>gb|AC144560.3| Homo sapiens X BAC RP13-507I23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 68529 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 aggaggaagaggaagatgaagg 89 |||||||||||||||||||||| Sbjct: 6038 aggaggaagaggaagatgaagg 6017
>gb|BC066596.1| Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, mRNA (cDNA clone IMAGE:5753597), complete cds Length = 1650 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 530 gaggaggaagaggaagatgaag 551
>emb|AL832487.1|HSM803795 Homo sapiens mRNA; cDNA DKFZp686C1522 (from clone DKFZp686C1522) Length = 5544 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 839 gaggaggaagaggaagatgaag 860
>ref|NM_139045.2| Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2), transcript variant 2, mRNA Length = 5703 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 4600 gaggaggaagaggaagatgaag 4621
>ref|NM_003070.3| Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2), transcript variant 1, mRNA Length = 5758 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 4654 gaggaggaagaggaagatgaag 4675
>emb|CR595322.1| full-length cDNA clone CS0DJ015YK07 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1735 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 724 gaggaggaagaggaagatgaag 745
>emb|CR591550.1| full-length cDNA clone CS0DL006YH05 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1764 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 697 gaggaggaagaggaagatgaag 718
>gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, complete sequence Length = 188095 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 104570 gaggaggaagaggaagatgaag 104591
>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome Length = 305107 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 183520 gaggaggaagaggaagatgaag 183499
>gb|AC134466.4| Mus musculus BAC clone RP23-463E4 from chromosome 1, complete sequence Length = 183104 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 41247 gaggaggaagaggaagatgaag 41226
>emb|CR354217.1| Gallus gallus finished cDNA, clone ChEST263o10 Length = 1248 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 139 gaggaggaagaggaagatgaag 160
>gb|AF369029.2| White spot syndrome virus, complete genome Length = 292967 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 232316 gaggaggaagaggaagatgaag 232295
>gb|AC140263.3| Mus musculus BAC clone RP24-299F13 from chromosome 17, complete sequence Length = 158695 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 44670 gaggaggaagaggaagatgaag 44691
>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence Length = 333321 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 315604 gaggaggaagaggaagatgaag 315583
>ref|NM_204446.1| Gallus gallus phosphatase and actin regulator 1 (PHACTR1), mRNA Length = 2404 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 1704 gaggaggaagaggaagatgaag 1725
>ref|XM_216105.3| PREDICTED: Rattus norvegicus interferon regulatory factor 5 (predicted) (Irf5_predicted), mRNA Length = 2062 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 474 gaggaggaagaggaagatgaag 495
>gb|AF116724.1| Homo sapiens MSTP054 mRNA, complete cds Length = 3624 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 821 gaggaggaagaggaagatgaag 842
>gb|AC023632.19| Homo sapiens chromosome 8, clone RP11-267M23, complete sequence Length = 183859 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 114986 gaggaggaagaggaagatgaag 114965
>gb|AF187723.1|AF187723 Aedes aegypti Na+/H+ antiporter (NHE3) mRNA, complete cds Length = 3981 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 3654 gaggaggaagaggaagatgaag 3675
>dbj|AB100407.1| Gallus gallus DDSG1 mRNA for hypothetical protein, complete cds Length = 2404 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 1704 gaggaggaagaggaagatgaag 1725
>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome Length = 307287 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 217128 gaggaggaagaggaagatgaag 217107
>gb|BC112288.1| Homo sapiens KIAA1429, transcript variant 2, mRNA (cDNA clone MGC:138493 IMAGE:8327756), complete cds Length = 3572 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 909 gaggaggaagaggaagatgaag 930
>emb|CT737399.2| Pan troglodytes chromosome X clone CH251-213G08 map Xq28, complete sequence Length = 144757 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 aggaggaagaggaagatgaagg 89 |||||||||||||||||||||| Sbjct: 25747 aggaggaagaggaagatgaagg 25726
>dbj|D26155.1|HUMHSNF2A Homo sapiens mRNA for transcriptional activator hSNF2a, complete cds Length = 5257 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 4798 gaggaggaagaggaagatgaag 4819
>emb|AL929144.10| Mouse DNA sequence from clone RP23-441D24 on chromosome 2, complete sequence Length = 82369 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 10937 gaggaggaagaggaagatgaag 10916
>emb|AL844893.9| Mouse DNA sequence from clone RP23-355H24 on chromosome 2, complete sequence Length = 175570 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 52866 gaggaggaagaggaagatgaag 52887
>emb|X72889.1|HSHBRM H.sapiens hbrm mRNA Length = 5959 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 4765 gaggaggaagaggaagatgaag 4786
>dbj|AP004218.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1198A1 Length = 195623 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 72462 gaggaggaagaggaagatgaag 72441
>dbj|AB037850.1| Homo sapiens mRNA for KIAA1429 protein, partial cds Length = 5507 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaag 88 |||||||||||||||||||||| Sbjct: 821 gaggaggaagaggaagatgaag 842
>ref|NM_121058.2| Arabidopsis thaliana unknown protein AT5G10200 mRNA, complete cds Length = 2517 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggtc 91 |||||||| |||||||||||||||| Sbjct: 2041 gaggaggaggaggaagatgaaggtc 2065
>ref|NM_106743.2| Arabidopsis thaliana acyltransferase AT1G80950 mRNA, complete cds Length = 1484 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 494 gaggaagaggaagatgaaggt 514
>ref|XM_635958.1| Dictyostelium discoideum ABC transporter C family protein (DDB0215360), partial mRNA Length = 4080 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 1258 gaggaggaagaggaagatgaa 1278
>ref|NM_174841.2| Bos taurus inositol 1,4,5-triphosphate receptor, type 1 (ITPR1), mRNA Length = 9812 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 ttgtgcagcttctgcaaggtg 130 ||||||||||||||||||||| Sbjct: 4753 ttgtgcagcttctgcaaggtg 4773
>gb|BC106521.1| Xenopus laevis cDNA clone MGC:131272 IMAGE:7394699, complete cds Length = 980 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cgaggaggaagaggaagatga 86 ||||||||||||||||||||| Sbjct: 207 cgaggaggaagaggaagatga 227
>ref|XM_415717.1| PREDICTED: Gallus gallus similar to KIAA0612 protein (LOC417469), mRNA Length = 7024 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 3847 gaggaggaagaggaagatgaa 3867
>ref|XM_957680.1| Neurospora crassa OR74A hypothetical protein (NCU05668.1) partial mRNA Length = 1365 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gtgcgaggaggaagaggaaga 83 ||||||||||||||||||||| Sbjct: 741 gtgcgaggaggaagaggaaga 761
>ref|XM_325522.1| Neurospora crassa OR74A hypothetical protein (NCU05668.1) partial mRNA Length = 1365 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gtgcgaggaggaagaggaaga 83 ||||||||||||||||||||| Sbjct: 741 gtgcgaggaggaagaggaaga 761
>ref|XM_707296.1| Candida albicans SC5314 hypothetical protein (CaO19.13566), mRNA Length = 504 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 292 gaggaggaagaggaagatgaa 312
>ref|XM_707260.1| Candida albicans SC5314 hypothetical protein (CaO19.6147), mRNA Length = 504 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 292 gaggaggaagaggaagatgaa 312
>ref|NM_001040334.1| Danio rerio zgc:136264 (zgc:136264), mRNA Length = 1544 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggtc 91 |||||||||||||| |||||||||| Sbjct: 924 gaggaggaagaggaggatgaaggtc 948
>gb|AC123922.3| Mus musculus BAC clone RP24-198D1 from chromosome 1, complete sequence Length = 163727 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 aggaggaagaggaagatgaag 88 ||||||||||||||||||||| Sbjct: 104080 aggaggaagaggaagatgaag 104060
>gb|AC122198.2| Mus musculus BAC clone RP23-56F12 from 1, complete sequence Length = 180386 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 aggaggaagaggaagatgaag 88 ||||||||||||||||||||| Sbjct: 5458 aggaggaagaggaagatgaag 5438
>gb|AC121929.2| Mus musculus BAC clone RP24-204J10 from 5, complete sequence Length = 143840 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 100151 gaggaagaggaagatgaaggt 100171
>ref|XM_719475.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04298) partial mRNA Length = 5547 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cgaggaggaagaggaagatga 86 ||||||||||||||||||||| Sbjct: 4773 cgaggaggaagaggaagatga 4793
>gb|AC155344.1| Brassica rapa subsp. pekinensis clone KBrH080A08, complete sequence Length = 110038 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaaggtc 91 |||||||||||||||||||| |||| Sbjct: 12757 gaggaggaagaggaagatgatggtc 12733
>gb|BC115060.1| Danio rerio hypothetical protein LOC566273, mRNA (cDNA clone MGC:136264 IMAGE:7450477), complete cds Length = 1544 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggtc 91 |||||||||||||| |||||||||| Sbjct: 924 gaggaggaagaggaggatgaaggtc 948
>emb|AL360334.1|ATF18D22 Arabidopsis thaliana DNA chromosome 5, BAC clone F18D22 (ESSA project) Length = 57180 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggtc 91 |||||||| |||||||||||||||| Sbjct: 8934 gaggaggaggaggaagatgaaggtc 8958
>ref|NM_001025541.1| Danio rerio hypothetical protein LOC566273 (LOC566273), mRNA Length = 2016 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggtc 91 |||||||||||||| |||||||||| Sbjct: 830 gaggaggaagaggaggatgaaggtc 854
>emb|CR857181.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0522 (from clone DKFZp469C0522) Length = 3491 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cgaggaggaagaggaagatga 86 ||||||||||||||||||||| Sbjct: 2449 cgaggaggaagaggaagatga 2469
>gb|AY128312.1| Arabidopsis thaliana unknown protein (At1g80950) mRNA, complete cds Length = 1394 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 404 gaggaagaggaagatgaaggt 424
>emb|X82070.1|ACIGMHCTM A.calva mRNA for IgM heavy chain transmembrane region Length = 228 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 104 gaggaagaggaagatgaaggt 84
>gb|AC090479.6| Mus Musculus Chromosome 18 RP23-363E23, complete sequence Length = 199409 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 134945 gaggaggaagaggaagatgaa 134965
>ref|NM_080365.2| Drosophila melanogaster Ca2+-channel protein 1 subunit D CG4894-RB, transcript variant B (Ca-alpha1D), mRNA Length = 7950 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gtgcgaggaggaagaggaaga 83 ||||||||||||||||||||| Sbjct: 3909 gtgcgaggaggaagaggaaga 3929
>gb|AF474333.1| Dictyostelium discoideum ABC transporter ABCC.1 (abcC1) gene, complete cds Length = 6180 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 2528 gaggaggaagaggaagatgaa 2548
>gb|AC175193.2| Sporobolomyces roseus clone JGIBAIF-13I18, complete sequence Length = 33112 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 11753 gaggaggaagaggaagatgaa 11773
>gb|AC137524.4| Mus musculus BAC clone RP23-55M20 from chromosome 7, complete sequence Length = 253824 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 aggaggaagaggaagatgaag 88 ||||||||||||||||||||| Sbjct: 92157 aggaggaagaggaagatgaag 92137
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 167 tccaaccagaagcacaagcagcgccaggg 195 |||||| | |||||||||||||||||||| Sbjct: 329073 tccaacaacaagcacaagcagcgccaggg 329101
>gb|AF321235.1|AF321235 Mus musculus chromosome 7-E3 B4 olfactory receptor gene, partial cds; and B5 olfactory receptor and B6 olfactory receptor genes, complete cds Length = 34498 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 aggaggaagaggaagatgaag 88 ||||||||||||||||||||| Sbjct: 11149 aggaggaagaggaagatgaag 11169
>emb|BX929995.2| Gallus gallus finished cDNA, clone ChEST771o14 Length = 1541 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 caagtggagtttccagttgag 413 ||||||||||||||||||||| Sbjct: 1282 caagtggagtttccagttgag 1262
>emb|CR352978.1| Gallus gallus finished cDNA, clone ChEST544f4 Length = 942 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 421 gaggaggaagaggaagatgaa 441
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 27867362 gaggaggaagaggaagatgaa 27867382
>emb|BX815097.1|CNS0AAV9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS32ZB01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1404 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 447 gaggaagaggaagatgaaggt 467
>gb|BC072868.1| Xenopus laevis Polycomb homolog Pc1, mRNA (cDNA clone MGC:80277 IMAGE:5073389), complete cds Length = 3649 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cgaggaggaagaggaagatga 86 ||||||||||||||||||||| Sbjct: 366 cgaggaggaagaggaagatga 346
>gb|BT003346.1| Arabidopsis thaliana unknown protein (At1g80950) mRNA, complete cds Length = 1260 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 316 gaggaagaggaagatgaaggt 336
>ref|XM_340913.2| PREDICTED: Rattus norvegicus upstream binding transcription factor, RNA polymerase I (Ubtf), mRNA Length = 3228 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cgaggaggaagaggaagatga 86 ||||||||||||||||||||| Sbjct: 2377 cgaggaggaagaggaagatga 2397
>gb|AY084489.1| Arabidopsis thaliana clone 109415 mRNA, complete sequence Length = 1483 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 495 gaggaagaggaagatgaaggt 515
>ref|XM_345440.2| PREDICTED: Rattus norvegicus similar to chromosome 20 open reading frame 6 (predicted) (LOC366203), mRNA Length = 2530 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 829 gaggaggaagaggaagatgaa 849
>gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 from chromosome unknown, complete sequence Length = 161382 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 98878 gaggaggaagaggaagatgaa 98858
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 30720 gaggaggaagaggaagatgaa 30740
>emb|AJ245364.1|ABA245364 Acipenser baeri partial mRNA for Immunoglobulin heavy chain, transmembrane region (IGH-TM gene) Length = 347 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 106 gaggaagaggaagatgaaggt 86
>emb|AJ245363.1|ABA245363 Acipenser baeri partial mRNA for Immunoglobulin heavy chain, transmembrane form (IGH-CH1TM gene) Length = 199 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 177 gaggaagaggaagatgaaggt 157
>emb|AJ245362.1|ABA245362 Acipenser baeri partial mRNA for Immunoglobulin heavy chain transmembrane form, (IGH-CH4TM gene) Length = 175 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 153 gaggaagaggaagatgaaggt 133
>dbj|AB038233.1| Rattus rattus mRNA for ABTAP, complete cds Length = 3381 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 952 gaggaggaagaggaagatgaa 972
>ref|NM_210845.1| Eremothecium gossypii AFL057Wp (AFL057W), mRNA Length = 243 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 167 tccaaccagaagcacaagcagcgccaggg 195 |||||| | |||||||||||||||||||| Sbjct: 211 tccaacaacaagcacaagcagcgccaggg 239
>gb|AC011713.2|F23A5 Arabidopsis thaliana chromosome 1 BAC F23A5 sequence, complete sequence Length = 109694 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 98603 gaggaagaggaagatgaaggt 98583
>gb|AF157625.1|AF157625 Bos taurus inositol 1,4,5-trisphosphate receptor type I mRNA, complete cds Length = 9812 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 ttgtgcagcttctgcaaggtg 130 ||||||||||||||||||||| Sbjct: 4753 ttgtgcagcttctgcaaggtg 4773
>emb|BX470246.11| Zebrafish DNA sequence from clone DKEYP-8F4 in linkage group 20, complete sequence Length = 148286 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggtc 91 |||||||||||||| |||||||||| Sbjct: 88404 gaggaggaagaggaggatgaaggtc 88428
>gb|AF101438.1|AF101438 Xenopus laevis Polycomb homolog Pc1 (Pc1) mRNA, complete cds Length = 4380 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cgaggaggaagaggaagatga 86 ||||||||||||||||||||| Sbjct: 417 cgaggaggaagaggaagatga 397
>gb|AC133519.3| Mus musculus BAC clone RP23-178N8 from chromosome 5, complete sequence Length = 219269 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaaggt 90 ||||||||||||||||||||| Sbjct: 52377 gaggaagaggaagatgaaggt 52397
>gb|AC115894.6| Mus musculus chromosome 18, clone RP24-443A14, complete sequence Length = 185242 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 170927 gaggaggaagaggaagatgaa 170907
>gb|BC105755.1| Rattus norvegicus similar to chromosome 20 open reading frame 6, mRNA (cDNA clone IMAGE:5599382), partial cds Length = 1818 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 888 gaggaggaagaggaagatgaa 908
>emb|AL356332.1|ATT31P16 Arabidopsis thaliana DNA chromosome 5, BAC clone T31P16 (ESSA project) Length = 80088 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggtc 91 |||||||| |||||||||||||||| Sbjct: 68836 gaggaggaggaggaagatgaaggtc 68860
>gb|AC115633.4| Mus musculus BAC clone RP24-361I15 from 16, complete sequence Length = 135437 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 aggaggaagaggaagatgaag 88 ||||||||||||||||||||| Sbjct: 107651 aggaggaagaggaagatgaag 107671
>gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complete sequence Length = 175691 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaa 87 ||||||||||||||||||||| Sbjct: 57840 gaggaggaagaggaagatgaa 57820
>ref|NM_115484.2| Arabidopsis thaliana unknown protein AT3G56260 mRNA, complete cds Length = 1010 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 gcgaggaggaagaggaagatgaag 88 ||||||||||| |||||||||||| Sbjct: 534 gcgaggaggaaaaggaagatgaag 511
>gb|AC158553.13| Mus musculus chromosome 8, clone RP23-349E13, complete sequence Length = 213309 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 207313 gaggaggaagaggaagatga 207294
>gb|AC161120.5| Mus musculus BAC clone RP23-84A2 from chromosome 10, complete sequence Length = 214638 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 97226 gaggaggaagaggaagatga 97245
>gb|AC151846.3| Mus musculus BAC clone RP23-13B8 from chromosome 10, complete sequence Length = 252639 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 68181 gaggaggaagaggaagatga 68162
>gb|AC167815.3| Mus musculus BAC clone RP23-463H10 from chromosome 5, complete sequence Length = 198336 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 167445 gaggaggaagaggaagatga 167426
>gb|AC159285.3| Mus musculus BAC clone RP23-306M13 from chromosome 8, complete sequence Length = 231778 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 28663 gaggaggaagaggaagatga 28644
>gb|AC165151.2| Mus musculus BAC clone RP24-77O15 from chromosome 16, complete sequence Length = 177446 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 gctcgtgcgaggaggaagaggaag 82 |||||||| ||||||||||||||| Sbjct: 137973 gctcgtgccaggaggaagaggaag 137950
>gb|AY513131.1| Danio rerio antagonist of mesoderm induction by nodal mRNA, complete cds Length = 3045 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggt 90 ||||| |||||||||||||||||| Sbjct: 2394 gaggaagaagaggaagatgaaggt 2417
>gb|AC104743.28| Mus musculus chromosome 6, clone RP23-27D8, complete sequence Length = 218391 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 1467 gaggaggaagaggaagatga 1486
>gb|AY166728.1| Aedes albopictus microsatellite AaUM2.4 sequence Length = 288 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 266 gaggaggaagaggaagatga 247
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gcgcatcggtgaagcggttg 112 |||||||||||||||||||| Sbjct: 1643813 gcgcatcggtgaagcggttg 1643832
>gb|AC156020.2| Mus musculus BAC clone RP23-343A9 from chromosome 16, complete sequence Length = 215559 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 gctcgtgcgaggaggaagaggaag 82 |||||||| ||||||||||||||| Sbjct: 170362 gctcgtgccaggaggaagaggaag 170385
>gb|AC154227.2| Mus musculus BAC clone RP24-142A23 from chromosome 14, complete sequence Length = 156644 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 69126 gaggaggaagaggaagatga 69145
>gb|AC102354.14| Mus musculus chromosome 17, clone RP23-80J17, complete sequence Length = 117703 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 14951 gaggaggaagaggaagatga 14932
>gb|AC092187.2| Drosophila melanogaster clone BACR23N06, complete sequence Length = 164920 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cgaggaggaagaggaagatg 85 |||||||||||||||||||| Sbjct: 25061 cgaggaggaagaggaagatg 25080
>gb|AY818394.1| Ailuropoda melanoleuca immunoglobulin delta heavy chain gene, partial cds Length = 10428 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaaggt 90 |||||||||||||| ||||||||| Sbjct: 116 gaggaggaagaggacgatgaaggt 93
>gb|AY818393.1| Ailuropoda melanoleuca immunoglobulin mu heavy chain gene, partial cds Length = 458 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaaggt 90 |||||||||||||| ||||||||| Sbjct: 116 gaggaggaagaggacgatgaaggt 93
>ref|XM_417966.1| PREDICTED: Gallus gallus similar to prostein protein (LOC419834), mRNA Length = 1926 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 659 gaggaggaagaggaagatga 640
>gb|AC124327.9| Mus musculus chromosome 8, clone RP24-490I13, complete sequence Length = 141781 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 117051 gaggaggaagaggaagatga 117070
>gb|BC070624.1| Xenopus laevis hypothetical protein MGC81409, mRNA (cDNA clone MGC:81409 IMAGE:6635102), complete cds Length = 990 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 208 gaggaggaagaggaagatga 227
>gb|AY208969.2| Danio rerio Frodo2 (frd2) mRNA, complete cds Length = 2517 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggt 90 ||||| |||||||||||||||||| Sbjct: 2326 gaggaagaagaggaagatgaaggt 2349
>gb|BC016525.1| Mus musculus SET and MYND domain containing 5, mRNA (cDNA clone MGC:29044 IMAGE:3601356), complete cds Length = 1844 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 1193 gaggaggaagaggaagatga 1212
>gb|BC059203.1| Danio rerio zgc:66429, mRNA (cDNA clone MGC:66429 IMAGE:2599595), complete cds Length = 3766 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaagg 89 |||||||||||||||||||| Sbjct: 2955 gaggaagaggaagatgaagg 2974
>ref|XM_614421.2| PREDICTED: Bos taurus similar to Apoptotic chromatin condensation inducer in the nucleus (Acinus), transcript variant 1 (LOC534600), mRNA Length = 3905 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 852 gaggaggaagaggaagatga 871
>ref|XM_874346.1| PREDICTED: Bos taurus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30), transcript variant 2 (LOC614126), mRNA Length = 1145 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 636 gaggaggaagaggaagatga 655
>ref|XM_864795.1| PREDICTED: Bos taurus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30), transcript variant 1 (LOC614126), mRNA Length = 932 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 636 gaggaggaagaggaagatga 655
>ref|XM_956675.1| Neurospora crassa OR74A hypothetical protein (NCU08689.1) partial mRNA Length = 3573 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cgaggaggaagaggaagatg 85 |||||||||||||||||||| Sbjct: 378 cgaggaggaagaggaagatg 397
>ref|XM_329812.1| Neurospora crassa OR74A hypothetical protein (NCU08689.1) partial mRNA Length = 3573 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cgaggaggaagaggaagatg 85 |||||||||||||||||||| Sbjct: 378 cgaggaggaagaggaagatg 397
>ref|XM_614378.2| PREDICTED: Bos taurus similar to CG11763-PA, isoform A (LOC534570), mRNA Length = 1309 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 1202 gaggaggaagaggaagatga 1221
>ref|NM_011551.4| Mus musculus upstream binding transcription factor, RNA polymerase I (Ubtf), mRNA Length = 3031 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2124 gaggaggaagaggaagatga 2143
>ref|NM_172755.2| Mus musculus splicing factor, arginine/serine-rich 14 (Sfrs14), mRNA Length = 3891 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 3037 gaggaggaagaggaagatga 3056
>gb|AC146432.3| Pan troglodytes BAC clone RP43-19M2 from 7, complete sequence Length = 177888 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cacctccaaccagaagcaca 182 |||||||||||||||||||| Sbjct: 114743 cacctccaaccagaagcaca 114762
>gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosome 1, complete sequence Length = 209820 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 75914 gaggaggaagaggaagatga 75933
>gb|AC130713.4| Mus musculus BAC clone RP23-316K10 from chromosome 15, complete sequence Length = 192020 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 52941 gaggaggaagaggaagatga 52922
>ref|NM_172874.2| Mus musculus podocan (Podn), mRNA Length = 3177 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2201 gaggaggaagaggaagatga 2220
>ref|XM_654165.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1653.2), mRNA Length = 5058 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaagg 89 |||||||||||||||||||| Sbjct: 1846 gaggaagaggaagatgaagg 1865
>ref|XM_652800.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0288.2), mRNA Length = 1821 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ggaggaagaggaagatgaag 88 |||||||||||||||||||| Sbjct: 273 ggaggaagaggaagatgaag 292
>gb|AC102388.7| Mus musculus chromosome 3, clone RP24-298F19, complete sequence Length = 166620 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 15790 gaggaggaagaggaagatga 15771
>gb|BT012246.1| Arabidopsis thaliana At3g56260 gene, complete cds Length = 594 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 gcgaggaggaagaggaagatgaag 88 ||||||||||| |||||||||||| Sbjct: 346 gcgaggaggaaaaggaagatgaag 323
>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence Length = 184079 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 27101 gaggaggaagaggaagatga 27082
>gb|AC155728.13| Mus musculus 6 BAC RP24-162H1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176377 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 138805 gaggaggaagaggaagatga 138824
>ref|NM_001032446.1| Ciona intestinalis dynein intermediate chain 3 (CiIC3), mRNA Length = 2151 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 491 gaggaggaagaggaagatga 510
>gb|BT011600.1| Arabidopsis thaliana At3g56260 mRNA, complete cds Length = 881 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 gcgaggaggaagaggaagatgaag 88 ||||||||||| |||||||||||| Sbjct: 456 gcgaggaggaaaaggaagatgaag 433
>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence Length = 181742 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 25242 gaggaggaagaggaagatga 25261
>gb|BC023276.1| Mus musculus splicing factor, arginine/serine-rich 14, mRNA (cDNA clone IMAGE:3986304), partial cds Length = 1752 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 811 gaggaggaagaggaagatga 830
>gb|AC005078.1| Homo sapiens BAC clone CTA-252K19 from 7, complete sequence Length = 73231 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cacctccaaccagaagcaca 182 |||||||||||||||||||| Sbjct: 9177 cacctccaaccagaagcaca 9158
>gb|AC004159.1| Homo sapiens PAC clone RP5-1057M1 from 7, complete sequence Length = 106039 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggt 90 ||||||||||||||||| |||||| Sbjct: 33812 gaggaggaagaggaagaggaaggt 33835
>ref|XM_978687.1| PREDICTED: Mus musculus cDNA sequence BC030863 (BC030863), mRNA Length = 6894 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 418 gaggaggaagaggaagatga 437
>ref|XM_979045.1| PREDICTED: Mus musculus cDNA sequence BC030863 (BC030863), mRNA Length = 6890 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 418 gaggaggaagaggaagatga 437
>ref|XM_622935.3| PREDICTED: Mus musculus cDNA sequence BC030863, transcript variant 2 (BC030863), mRNA Length = 6894 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 418 gaggaggaagaggaagatga 437
>ref|XM_001002785.1| PREDICTED: Mus musculus cDNA sequence BC030863 (BC030863), mRNA Length = 6891 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 418 gaggaggaagaggaagatga 437
>ref|XR_003476.1| PREDICTED: Mus musculus similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a) (LOC546802), mRNA Length = 575 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 549 gaggaggaagaggaagatga 568
>ref|XR_004107.1| PREDICTED: Mus musculus similar to CBF1 interacting corepressor (LOC673032), mRNA Length = 1918 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 896 gaggaggaagaggaagatga 877
>gb|AC118000.14| Mus musculus chromosome 3, clone RP23-33M9, complete sequence Length = 167218 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaagg 89 |||||||||||||||||||| Sbjct: 152365 gaggaagaggaagatgaagg 152384
>ref|XM_446244.1| Candida glabrata CBS138, CAGL0F06369g partial mRNA Length = 2670 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2614 gaggaggaagaggaagatga 2633
>gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome 16, complete sequence Length = 216783 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gaggaagaggaagatgaagg 89 |||||||||||||||||||| Sbjct: 49005 gaggaagaggaagatgaagg 48986
>ref|XM_538883.2| PREDICTED: Canis familiaris similar to Bromodomain and PHD finger-containing protein 3 (LOC481762), mRNA Length = 4171 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaagg 89 |||||||||||||||||||| Sbjct: 1618 gaggaagaggaagatgaagg 1637
>gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosome 8, complete sequence Length = 212579 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 174229 gaggaggaagaggaagatga 174248
>gb|AC133190.2| Mus musculus BAC clone RP23-375H9 from chromosome 10, complete sequence Length = 151273 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 98952 gaggaggaagaggaagatga 98971
>gb|AC122232.3| Mus musculus BAC clone RP23-136G1 from chromosome 7, complete sequence Length = 182272 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 166499 gaggaggaagaggaagatga 166518
>gb|BC052487.1| Mus musculus podocan, mRNA (cDNA clone IMAGE:6392159), containing frame-shift errors Length = 2987 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2026 gaggaggaagaggaagatga 2045
>gb|AC079443.48| Mus musculus strain C57BL/6J clone rp23-381f7 map 6, complete sequence Length = 207091 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 28430 gaggaggaagaggaagatga 28411
>gb|AC124379.3| Mus musculus BAC clone RP24-399H16 from chromosome 7, complete sequence Length = 182479 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 12038 gaggaggaagaggaagatga 12057
>gb|BC057305.1| Mus musculus splicing factor, arginine/serine-rich 14, mRNA (cDNA clone MGC:66544 IMAGE:6822887), complete cds Length = 4296 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2697 gaggaggaagaggaagatga 2716
>gb|BC042763.1| Mus musculus splicing factor, arginine/serine-rich 14, mRNA (cDNA clone IMAGE:4461150), partial cds Length = 2893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 1392 gaggaggaagaggaagatga 1411
>gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, complete sequence Length = 183554 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 170245 gaggaggaagaggaagatga 170264
>ref|XM_846977.1| PREDICTED: Canis familiaris similar to mesoderm induction early response 1, transcript variant 2 (LOC479536), mRNA Length = 2485 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggt 90 ||||||||||||||||| |||||| Sbjct: 486 gaggaggaagaggaagaagaaggt 509
>ref|XM_859837.1| PREDICTED: Canis familiaris similar to mesoderm induction early response 1, transcript variant 6 (LOC479536), mRNA Length = 2559 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggt 90 ||||||||||||||||| |||||| Sbjct: 560 gaggaggaagaggaagaagaaggt 583
>ref|XM_859816.1| PREDICTED: Canis familiaris similar to mesoderm induction early response 1, transcript variant 5 (LOC479536), mRNA Length = 1795 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggt 90 ||||||||||||||||| |||||| Sbjct: 470 gaggaggaagaggaagaagaaggt 493
>ref|XM_859756.1| PREDICTED: Canis familiaris similar to mesoderm induction early response 1, transcript variant 3 (LOC479536), mRNA Length = 2469 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatgaaggt 90 ||||||||||||||||| |||||| Sbjct: 470 gaggaggaagaggaagaagaaggt 493
>ref|XM_760663.1| Theileria parva strain Muguga chromosome 1 ubiquitin-protein ligase (TP01_0229) partial mRNA Length = 12495 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 6880 gaggaggaagaggaagatga 6899
>gb|AY313606.1| Mus musculus podocan protein (Podn) mRNA, complete cds Length = 3177 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2201 gaggaggaagaggaagatga 2220
>gb|BC043122.1| Mus musculus cDNA sequence BC030863, mRNA (cDNA clone IMAGE:6409152), partial cds Length = 6190 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 51 gaggaggaagaggaagatga 70
>gb|DQ147998.1| Macaca mulatta clone ds1_n06_t7_134 leucine-rich acidic nuclear phosphoprotein 32 family, member E (ANP32E) mRNA, partial cds Length = 476 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 249 gaggaggaagaggaagatga 268
>gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, complete sequence Length = 206979 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 48506 gaggaggaagaggaagatga 48525
>gb|AC006945.17| Mus musculus strain 129/Sv clone ct7-453l13 map 6, complete sequence Length = 120311 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 80670 gaggaggaagaggaagatga 80651
>gb|AC144799.3| Mus musculus chromosome 18 clone RP24-299J7, complete sequence Length = 192272 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 112999 gaggaggaagaggaagatga 112980
>emb|BX936363.13| Zebrafish DNA sequence from clone CH211-112P19 in linkage group 11, complete sequence Length = 184849 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaagg 89 |||||||||||||||||||| Sbjct: 43452 gaggaagaggaagatgaagg 43471
>ref|NM_009109.1| Mus musculus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA Length = 15358 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 5786 gaggaggaagaggaagatga 5805
>ref|NM_001004156.1| Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (Plekhg5), mRNA Length = 4128 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 1174 gaggaggaagaggaagatga 1193
>gb|AY605058.1| Mus musculus RhoA-specific guanine exchange factor SYX2 mRNA, complete cds Length = 4128 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 1174 gaggaggaagaggaagatga 1193
>gb|AY605057.1| Mus musculus RhoA-specific guanine exchange factor SYX1 mRNA, complete cds Length = 3867 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 1174 gaggaggaagaggaagatga 1193
>ref|XM_795323.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC586871 (LOC586871), mRNA Length = 3324 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 910 gaggaggaagaggaagatga 929
>gb|AC092003.3| Felis catus clone RP86-137F8, complete sequence Length = 157615 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ggaagaggaagatgaaggtc 91 |||||||||||||||||||| Sbjct: 102159 ggaagaggaagatgaaggtc 102140
>emb|AL356457.25| Human DNA sequence from clone RP11-145D11 on chromosome 1 Contains part of the DPYD gene for dihydropyrimidine dehydrogenase, a ribosomal protein L26 (RPL26) pseudogene and a pseudogene similar to part of SEC63-like (S. cerevisiae) (SEC63), complete sequence Length = 120510 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 11079 gaggaggaagaggaagatga 11098
>emb|AL121984.14|HSA277C14 Human DNA sequence from clone RP11-277C14 on chromosome 1 Contains part of the DNM3 gene for dynamin 3, complete sequence Length = 155941 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 56980 gaggaggaagaggaagatga 56961
>emb|X60831.1|MMUBF Mouse ubf gene for transcription factor UBF Length = 3031 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2124 gaggaggaagaggaagatga 2143
>emb|CR457367.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0521D for gene IPO4, importin 4; complete cds, incl. stopcodon Length = 2274 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 1474 gaggaggaagaggaagatga 1493
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 628110 gaggaggaagaggaagatga 628091
>gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosome 10, complete sequence Length = 205283 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 26456 gaggaggaagaggaagatga 26475
>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21 Length = 99492 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 gcgaggaggaagaggaagatgaag 88 ||||||||||| |||||||||||| Sbjct: 71387 gcgaggaggaaaaggaagatgaag 71410
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 21535 gaggaggaagaggaagatga 21554
>emb|CR628365.6| Zebrafish DNA sequence from clone CH211-137O16 in linkage group 11, complete sequence Length = 191036 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaagg 89 |||||||||||||||||||| Sbjct: 59910 gaggaagaggaagatgaagg 59929
>emb|CR847787.4| Zebrafish DNA sequence from clone DKEY-181C21 in linkage group 8, complete sequence Length = 32924 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 30439 gaggaggaagaggaagatga 30420
>emb|AL645598.14| Mouse DNA sequence from clone RP23-259J23 on chromosome 11 Contains a ribosomal protein S17 (Rps17) pseudogene, complete sequence Length = 141141 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 109221 gaggaggaagaggaagatga 109240
>emb|CR860636.1| Pongo pygmaeus mRNA; cDNA DKFZp459M1324 (from clone DKFZp459M1324) Length = 3301 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2330 gaggaggaagaggaagatga 2349
>ref|NM_213539.1| Danio rerio zgc:66429 (zgc:66429), mRNA Length = 3766 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gaggaagaggaagatgaagg 89 |||||||||||||||||||| Sbjct: 2955 gaggaagaggaagatgaagg 2974
>emb|CR354750.1| Mus musculus chromosome 6, clone tr151 strain 129/Sv, complete sequence Length = 167508 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 125858 gaggaggaagaggaagatga 125877
>dbj|AK128947.1| Mus musculus cDNA fis, clone TRACH3007595, highly similar to Nucleolar transcription factor 1 Length = 3042 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2173 gaggaggaagaggaagatga 2192
>emb|CR625105.1| full-length cDNA clone CS0DG001YB07 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1241 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 220 gaggaggaagaggaagatga 239
>ref|NM_024658.3| Homo sapiens importin 4 (IPO4), mRNA Length = 3606 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2577 gaggaggaagaggaagatga 2596
>dbj|AK095306.1| Homo sapiens cDNA FLJ37987 fis, clone CTONG2011429 Length = 3441 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2425 gaggaggaagaggaagatga 2444
>dbj|AK094897.1| Homo sapiens cDNA FLJ37578 fis, clone BRCOC2003732 Length = 3614 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2584 gaggaggaagaggaagatga 2603
>dbj|AK094107.1| Homo sapiens cDNA FLJ36788 fis, clone ADRGL2004451 Length = 3441 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2425 gaggaggaagaggaagatga 2444
>dbj|AK074743.1| Homo sapiens cDNA FLJ90262 fis, clone NT2RM4000965, weakly similar to PUTATIVE IMPORTIN BETA-4 SUBUNIT Length = 1864 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 836 gaggaggaagaggaagatga 855
>dbj|AK057277.1| Homo sapiens cDNA FLJ32715 fis, clone TESTI2000784, weakly similar to PUTATIVE IMPORTIN BETA-4 SUBUNIT Length = 3497 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2481 gaggaggaagaggaagatga 2500
>emb|CR598877.1| full-length cDNA clone CS0DB002YK14 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1271 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 315 gaggaggaagaggaagatga 334
>dbj|AK057044.1| Homo sapiens cDNA FLJ32482 fis, clone SKNMC2001324, weakly similar to PUTATIVE IMPORTIN BETA-4 SUBUNIT Length = 3580 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2558 gaggaggaagaggaagatga 2577
>dbj|AK056702.1| Homo sapiens cDNA FLJ32140 fis, clone PLACE5000058, weakly similar to PUTATIVE IMPORTIN BETA-4 SUBUNIT Length = 3440 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2424 gaggaggaagaggaagatga 2443
>dbj|AK027871.1| Homo sapiens cDNA FLJ14965 fis, clone SKNMC1000011, weakly similar to PUTATIVE IMPORTIN BETA-4 SUBUNIT Length = 1569 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 545 gaggaggaagaggaagatga 564
>emb|CR592033.1| full-length cDNA clone CS0DK004YP04 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 3437 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2444 gaggaggaagaggaagatga 2463
>gb|AC087114.7| Mus musculus Strain C57BL6/J Chromosome 10 RP23-309M23, complete sequence Length = 185825 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 88121 gaggaggaagaggaagatga 88140
>gb|AC117525.2| Homo sapiens chromosome 5 clone RP11-1152B5, complete sequence Length = 139141 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 82583 gaggaggaagaggaagatga 82602
>ref|NM_165147.1| Drosophila melanogaster Ca2+-channel protein 1 subunit D CG4894-RD, transcript variant D (Ca-alpha1D), mRNA Length = 7900 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtgcgaggaggaagaggaag 82 |||||||||||||||||||| Sbjct: 3909 gtgcgaggaggaagaggaag 3928
>ref|NM_165146.1| Drosophila melanogaster Ca2+-channel protein 1 subunit D CG4894-RC, transcript variant C (Ca-alpha1D), mRNA Length = 8049 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtgcgaggaggaagaggaag 82 |||||||||||||||||||| Sbjct: 3909 gtgcgaggaggaagaggaag 3928
>gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete sequence Length = 107436 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 gcgaggaggaagaggaagatgaag 88 ||||||||||||| |||||||||| Sbjct: 78877 gcgaggaggaagatgaagatgaag 78854
>ref|NM_134895.2| Drosophila melanogaster CG3605-RA (CG3605), mRNA Length = 2429 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cgaggaggaagaggaagatg 85 |||||||||||||||||||| Sbjct: 1809 cgaggaggaagaggaagatg 1828
>ref|NM_134429.2| Drosophila melanogaster Ca2+-channel protein 1 subunit D CG4894-RA, transcript variant A (Ca-alpha1D), mRNA Length = 7941 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtgcgaggaggaagaggaag 82 |||||||||||||||||||| Sbjct: 3909 gtgcgaggaggaagaggaag 3928
>gb|AC104332.2| Homo sapiens chromosome 1 clone RP11-330C7, complete sequence Length = 183838 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gaggaggaagaggaagatgaaggt 90 ||||||||||||||||| |||||| Sbjct: 41620 gaggaggaagaggaagaagaaggt 41597
>gb|AF411122.1| Homo sapiens importin 4 mRNA, complete cds Length = 3290 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gaggaggaagaggaagatga 86 |||||||||||||||||||| Sbjct: 2448 gaggaggaagaggaagatga 2467 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,090,489 Number of Sequences: 3902068 Number of extensions: 3090489 Number of successful extensions: 150675 Number of sequences better than 10.0: 349 Number of HSP's better than 10.0 without gapping: 349 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 149525 Number of HSP's gapped (non-prelim): 1144 length of query: 419 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 397 effective length of database: 17,147,199,772 effective search space: 6807438309484 effective search space used: 6807438309484 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)