ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast43a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor 33 0.20
2CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment) 33 0.27
3MAGE1_MACFA (Q9BE18) Melanoma-associated antigen E1 (MAGE-E1 ant... 32 0.45
4COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Conta... 32 0.45
5CATB_STRRE (O87864) Peroxidase/catalase (EC 1.11.1.6) (Catalase-... 32 0.45
6CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor 32 0.45
7RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subun... 32 0.59
8FRAT1_HUMAN (Q92837) Proto-oncogene FRAT1 (Frequently rearranged... 32 0.59
9CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor 32 0.59
10RPB1_YEAST (P04050) DNA-directed RNA polymerase II largest subun... 32 0.59
11RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subun... 32 0.78
12CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor 31 1.0
13DTX1_XENLA (Q8AW93) Protein deltex-1 (xDtx1) 31 1.3
14BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 prec... 31 1.3
15BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 prec... 31 1.3
16RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subun... 30 1.7
17RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subun... 30 1.7
18COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morpholog... 30 2.3
19NCOA3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48) ... 30 2.3
20SFTPA_MACMU (Q9TUC5) Pulmonary surfactant-associated protein A (... 30 2.9
21GUNB_FUSOX (P46236) Putative endoglucanase type B precursor (EC ... 30 2.9
22CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor 30 2.9
23RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subun... 30 2.9
24CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor 30 2.9
25CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor 30 2.9
26CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor 29 3.8
27UL61_HCMVA (P16818) Hypothetical protein UL61 29 3.8
28LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-bind... 29 3.8
29COAT_BWYVG (P09509) Coat protein 29 3.8
30CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor 29 3.8
31CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor 29 3.8
32CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor 29 3.8
33MAGE1_HUMAN (Q9HCI5) Melanoma-associated antigen E1 (MAGE-E1 ant... 29 5.0
34IF2_SYNEL (Q8DK04) Translation initiation factor IF-2 29 5.0
35COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor 29 5.0
36CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor 29 5.0
37TIF1B_MOUSE (Q62318) Transcription intermediary factor 1-beta (T... 29 5.0
38RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subun... 29 5.0
39CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor... 29 5.0
40RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subun... 29 5.0
41RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subun... 29 5.0
42CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor 29 5.0
43CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor 29 5.0
44CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor 29 5.0
45RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subun... 29 5.0
46EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI... 28 6.6
47TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Ta... 28 6.6
48SFTA1_HUMAN (Q8IWL2) Pulmonary surfactant-associated protein A1 ... 28 6.6
49MAGD1_HUMAN (Q9Y5V3) Melanoma-associated antigen D1 (MAGE-D1 ant... 28 6.6
50RPB1_DICDI (P35084) DNA-directed RNA polymerase II largest subun... 28 6.6
51COAT_PLRV (P10470) Coat protein 28 6.6
52CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments) 28 6.6
53CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor 28 6.6
54CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor 28 6.6
55CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor 28 6.6
56AP2_ARATH (P47927) Floral homeotic protein APETALA2 28 6.6
57MEI9_DROME (Q24087) Protein mei-9 (Protein meiotic 9) 28 6.6
58MAGD1_PIG (Q6ITT4) Melanoma-associated antigen D1 (MAGE-D1 antigen) 28 6.6
59TIF1B_HUMAN (Q13263) Transcription intermediary factor 1-beta (T... 28 6.6
60PCX3_MOUSE (Q8VI59) Pecanex-like protein 3 28 8.6
61EDA_BOVIN (Q9BEG5) Ectodysplasin-A (Ectodysplasin-1) (Ectodermal... 28 8.6
62ZN694_HUMAN (Q63HK3) Zinc finger protein 694 28 8.6
63RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subun... 28 8.6
64OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid) 28 8.6
65COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-... 28 8.6
66CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor 28 8.6
67GLT12_HUMAN (Q8IXK2) Polypeptide N-acetylgalactosaminyltransfera... 28 8.6
68COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor 28 8.6 
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor|
          Length = 1364

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 24/57 (42%), Positives = 27/57 (47%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 11
           GP   +GPPG    P   R   G    P A  FPG AGR     T P  P+G+SG P
Sbjct: 761 GPSGPNGPPG----PAGSRGDGGP---PGATGFPGAAGR-----TGPPGPSGISGPP 805
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>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)|
          Length = 1027

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 17
           GPP   GP GA R P   R   G   L  A+  PG AG+  E+     T P  PAG  G
Sbjct: 451 GPPGAAGPTGA-RGPPGPRGQQGFQGLAGAQGTPGEAGKTGERGAVGATGPSGPAGPGG 508
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>MAGE1_MACFA (Q9BE18) Melanoma-associated antigen E1 (MAGE-E1 antigen)|
          Length = 957

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
 Frame = +1

Query: 67  GLPTLETVQPEVG-SSGRKSTARRAVSG-APPAAHENPEDRVPFTPGRTHNRIRSPR*TA 240
           GL T     P+ G S+    TA   +S   PP   E P   +P TPG   +    P   +
Sbjct: 207 GLSTSVPDTPDEGLSTSVPPTATEGLSTPVPPTPDEGPSTSMPATPGEGRSTTMLPA-AS 265

Query: 241 SGQWNNV----GKGSRQNGSVTSGKGLALRT-GLGGPGP 342
            GQ  ++    GKGS  +G  T+ +GL+       G GP
Sbjct: 266 DGQSISLVPTPGKGSSTSGPPTATEGLSTSVQPTAGEGP 304
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>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin|
            (Endostatin-XV)]
          Length = 1367

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 100  PPAEP-FPGLAGR*AEKITLPEAPAGVSGLP 11
            PP  P +PGL G+  E +  P+ P G+ GLP
Sbjct: 1033 PPGLPGYPGLVGQKGEAVVGPQGPPGIPGLP 1063
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>CATB_STRRE (O87864) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)|
          Length = 740

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
 Frame = +1

Query: 70  LPTLETVQPEVG-SSGRKSTARR------AVSGAPPAAHENP-EDRVPFTPGRT-----H 210
           L TLE VQ E   SSG K  +          +G   AA E   E +VPFTPGR      H
Sbjct: 518 LRTLENVQQEFNASSGAKKVSLADLIVLGGAAGVEKAAKEAGFEIQVPFTPGRVDATEEH 577

Query: 211 NRIRS---PR*TASGQWNNVGKGSR 276
             + S      TA G  N +GKG+R
Sbjct: 578 TDVESFEALEPTADGFRNYLGKGNR 602
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>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 23/57 (40%), Positives = 27/57 (47%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 11
           GP   +GPPG    P   R   G    P A  FPG AGR     T P  P+G++G P
Sbjct: 763 GPSGPNGPPG----PAGSRGDGGP---PGATGFPGAAGR-----TGPPGPSGITGPP 807
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>RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1840

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS AY  P + G SP  P
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY-SPTSPGYSPTSP 1711



 Score = 30.8 bits (68), Expect = 1.3
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = -2

Query: 417  SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARG 238
            SPG   ++           PT+ G+   +P  SP S ++S S     PTS AY  P +  
Sbjct: 1542 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY-SPTSPS 1600

Query: 237  CSPWRP 220
             SP  P
Sbjct: 1601 YSPTSP 1606



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = -2

Query: 417  SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARG 238
            SPG    +        S  PT+  +   +P  SP S S+S +  S  PTS +Y  P +  
Sbjct: 1584 SPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPA 1642

Query: 237  CSPWRP 220
             SP  P
Sbjct: 1643 YSPTSP 1648



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = -2

Query: 417  SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARG 238
            SPG    +           PT+  +   +P  SP S S+S +  S  PTS +Y  P +  
Sbjct: 1570 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPS 1628

Query: 237  CSPWRP 220
             SP  P
Sbjct: 1629 YSPTSP 1634



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPAYSPTSP 1704



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1652 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1697



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  +  PTS AY  P +   SP  P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAY-SPTSPAYSPTSP 1662



 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1645 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1690
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>FRAT1_HUMAN (Q92837) Proto-oncogene FRAT1 (Frequently rearranged in advanced|
           T-cell lymphomas) (Frat-1)
          Length = 279

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 26/64 (40%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
 Frame = -2

Query: 276 PTSLAYIVPLARGCSP----WRPDAVMSTTGRERYSVLRIFMGRRGRTGHRAT--CGALP 115
           P  LA  VP  +  SP      P A+  T G     VLR  +G RGR   RA   C A  
Sbjct: 74  PGPLAAAVPADKARSPAVPLLLPPALAETVGPAPPGVLRCALGDRGRVRGRAAPYCVAEL 133

Query: 114 ATGP 103
           ATGP
Sbjct: 134 ATGP 137
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>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor|
          Length = 1759

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
 Frame = -1

Query: 181 GPPDFHGP---PGAHRTPRDVRCS--SGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSG 17
           GP   HG    PGA   PR       SG   LP    +PG+ G   E +   E PAG+ G
Sbjct: 564 GPNGDHGDCGMPGAPGKPRSAGSDGLSGSPGLPGIPGYPGMKGEAGEIVGPMENPAGIPG 623

Query: 16  L 14
           L
Sbjct: 624 L 624
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>RPB1_YEAST (P04050) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1) (B220)
          Length = 1733

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+ GFG  +P  SP S ++S +  +  PTS +Y  P +   SP  P
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSY-SPTSPSYSPTSP 1575



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS AY  P +   SP  P
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY-SPTSPSYSPTSP 1673



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -2

Query: 417  SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARG 238
            SPG    +        +  PT+  +   +P  SP S S+S +  S  PTS +Y  P +  
Sbjct: 1539 SPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPS 1597

Query: 237  CSPWRP 220
             SP  P
Sbjct: 1598 YSPTSP 1603



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/66 (30%), Positives = 30/66 (45%)
 Frame = -2

Query: 417  SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARG 238
            SPG   ++        +  PT+  +   +P  SP S S+S +  S  PTS +Y  P +  
Sbjct: 1532 SPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPS 1590

Query: 237  CSPWRP 220
             SP  P
Sbjct: 1591 YSPTSP 1596



 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPDAVMSTTG 196
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P    ++ G
Sbjct: 1656 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPNYSPTSPSYSPTSPG 1709



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 217
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 1649 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPN 1695



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPAYSPTSP 1666



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1659



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1607 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1652



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1600 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1645



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1638



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1586 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1631



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1579 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1624



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1617
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>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1887

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 22/60 (36%), Positives = 26/60 (43%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPDAVMSTTGRERYS 181
            PT   + A +P  SP    +S S     PTS  Y  P AR  SP  P  + S T    YS
Sbjct: 1813 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTY-TPTARNYSPTSP--MYSPTAPSHYS 1869
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>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -1

Query: 169 FHGPPGAHRTPRDVRCSSGHWTLPPAEP-FPGLAGR*AEKITLPEAPAGVSGLPNV 5
           F GPPGA   P+ V   SG    PP  P FPG  G        P  PAG+ G+P +
Sbjct: 390 FEGPPGAPG-PQGVVGPSG----PPGPPGFPGDPG--------PPGPAGLPGIPGI 432
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>DTX1_XENLA (Q8AW93) Protein deltex-1 (xDtx1)|
          Length = 623

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/69 (26%), Positives = 26/69 (37%)
 Frame = +1

Query: 142 SGAPPAAHENPEDRVPFTPGRTHNRIRSPR*TASGQWNNVGKGSRQNGSVTSGKGLALRT 321
           SG PPA    P   +  +  R  N         +  W   G+G R  G + +G G +   
Sbjct: 227 SGPPPALPPPPPPPIHPSGLRQSNTYSG----GAAGWGRTGEGMRSTGGIRNGSGFSRSQ 282

Query: 322 GLGGPGPEP 348
            + G  P P
Sbjct: 283 SVPGAAPYP 291
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>BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 precursor|
          Length = 1522

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 24/75 (32%), Positives = 34/75 (45%)
 Frame = +1

Query: 106 SSGRKSTARRAVSGAPPAAHENPEDRVPFTPGRTHNRIRSPR*TASGQWNNVGKGSRQNG 285
           S+G +  +R+  +    AAH   E R P+   R      +P  TA+GQWN  G  S  + 
Sbjct: 417 SNGTQQRSRQCTA----AAHGGSECRGPWAESR---ECYNPECTANGQWNQWGHWSGCSK 469

Query: 286 SVTSGKGLALRTGLG 330
           S   G    +RT  G
Sbjct: 470 SCDGGWERRMRTCQG 484
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>BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 precursor|
          Length = 1522

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 24/75 (32%), Positives = 34/75 (45%)
 Frame = +1

Query: 106 SSGRKSTARRAVSGAPPAAHENPEDRVPFTPGRTHNRIRSPR*TASGQWNNVGKGSRQNG 285
           S+G +  +R+  +    AAH   E R P+   R      +P  TA+GQWN  G  S  + 
Sbjct: 417 SNGTQQRSRQCTA----AAHGGSECRGPWAESR---ECYNPECTANGQWNQWGHWSGCSK 469

Query: 286 SVTSGKGLALRTGLG 330
           S   G    +RT  G
Sbjct: 470 SCDGGWERRIRTCQG 484
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>RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1)
          Length = 1752

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  + A +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1601 PTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1646



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = -2

Query: 417  SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARG 238
            SP   A +        S  PT+  +   +P  SP S S+S +  S  PTS +Y  P +  
Sbjct: 1603 SPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPS 1661

Query: 237  CSPWRP 220
             SP  P
Sbjct: 1662 YSPTSP 1667



 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1587 PTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSY-SPTSPSYSPTSP 1632



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1706 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1751



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1699 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1744



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1692 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1737



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1685 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1730



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1678 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1723



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1671 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1716



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1664 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1709



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1702



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1695



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1643 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1688



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1681
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>RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1853

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = -2

Query: 417  SPGRHAATXXXXXXXXSNP---PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPL 247
            SP  H  +        ++P   PT+  +   +P  SP S S+S +  S  PTS +Y  P 
Sbjct: 1603 SPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPT 1661

Query: 246  ARGCSPWRP 220
            +   SP  P
Sbjct: 1662 SPSYSPTSP 1670



 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1632 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPSSP 1677
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>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)|
          Length = 299

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPF-PGLAGR*AEKITLPEAPAGVSGLP 11
           GPP   G PGA  TP +    +    L P EP  PG AG        P+ P G  G P
Sbjct: 187 GPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAG--------PQGPPGSPGQP 236
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>NCOA3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)|
            (Amplified in breast cancer-1 protein homolog) (AIB-1)
            (Fragment)
          Length = 1082

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
 Frame = -2

Query: 360  PTADGFGAGT--PEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPDAVMSTTGRER 187
            P+ DG  AG+  P+  PQ   ++ +YG   P   A+     RG SP  P A+MS+     
Sbjct: 948  PSMDGVLAGSAMPQAPPQQFPYATNYGMGQPPEPAF----GRGSSP--PSAMMSS----- 996

Query: 186  YSVLRIFMGRRGRTGHRATCGALPATGPYLRLNRFQGW 73
                R+   +     H       P T P  + +  +GW
Sbjct: 997  ----RMGPSQNAMVQH-------PQTAPMYQSSEMKGW 1023
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>SFTPA_MACMU (Q9TUC5) Pulmonary surfactant-associated protein A (SP-A) (PSP-A)|
           (PSAP) (Fragment)
          Length = 165

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 19/51 (37%), Positives = 21/51 (41%)
 Frame = -1

Query: 163 GPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 11
           GPPG    P D+ C  G+  LP A   PG  G   E         G  GLP
Sbjct: 7   GPPGPMGPPGDMPCFPGNDGLPGAPGIPGECGEKGE-----PGERGPPGLP 52
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>GUNB_FUSOX (P46236) Putative endoglucanase type B precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase)
          Length = 462

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 73  PTLETVQPEVGSSGRKSTARRAVSGAPPAAHENP 174
           P+  T      + G  +TA  +V+ APPAA +NP
Sbjct: 74  PSSTTATKTTATGGSSTTAGGSVTSAPPAASDNP 107
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>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor|
          Length = 1707

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSG 113
           GPP F GPPG   TP    C +G
Sbjct: 637 GPPGFPGPPGPPGTPGQRDCDTG 659
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>RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1)
          Length = 1745

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = -2

Query: 417  SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARG 238
            SPG    +        S  PT+  +   +P  SP S S+S +  S  PTS +Y  P +  
Sbjct: 1542 SPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPS 1600

Query: 237  CSPWRP 220
             SP  P
Sbjct: 1601 YSPTSP 1606



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1718



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1711



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1704



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1697



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1690



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1683



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1676



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1669



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1662



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1655



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1603 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1648



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1596 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1641



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1634



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1582 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1627



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1575 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1620



 Score = 28.1 bits (61), Expect = 8.6
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
 Frame = -2

Query: 366  NPPTADGFG--------AGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            N PT+ GFG          +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1530 NGPTSPGFGDVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1585
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>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor|
          Length = 1685

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/57 (35%), Positives = 22/57 (38%)
 Frame = -1

Query: 181  GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 11
            G P FHG PG    P            PP  P P L G   +    P+ P G  GLP
Sbjct: 1223 GEPGFHGFPGVQGPPG-----------PPGSPGPALEG--PKGNPGPQGPPGRPGLP 1266
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>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor|
          Length = 1691

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP 86
           GPP   GPPG H +P D  C +G    PP  P
Sbjct: 435 GPP---GPPGPHISPSDEICETG----PPGPP 459



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
 Frame = -1

Query: 181  GPPDFHGPPGAHRT--------PRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAG 26
            G P   GPPG   +        P+ V+ S G   +P     PGL G+  EK     +  G
Sbjct: 1015 GKPGLTGPPGLKGSIGDMGFPGPQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGVSGIG 1074

Query: 25   VSGLP 11
            + GLP
Sbjct: 1075 LPGLP 1079
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>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor|
          Length = 1464

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
 Frame = -1

Query: 184  LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 17
            +GPP   GPPG           SG    P AE  PG  G    K     T P  P G  G
Sbjct: 1000 MGPPGLAGPPG----------ESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPG 1049

Query: 16   LP 11
             P
Sbjct: 1050 AP 1051
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>UL61_HCMVA (P16818) Hypothetical protein UL61|
          Length = 431

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
 Frame = +1

Query: 70  LPTLETVQPEVGSSGRKSTARRAVSGAPPAAHENPEDRVPF--TPGRTHNRIRSPR*TAS 243
           LP L T  P     G  +         PP+       R P   TP R     R P+ + +
Sbjct: 140 LPELLTGPPAPNLPGPIAVEPGRRPSPPPSTRPTYRRRRPTAATPSRKKKARRGPKASKA 199

Query: 244 GQWNNVGKGSRQNGSVTSGKGLALRTGLGGPGP 342
           G+   +G      GS  + +G +L TG+  P P
Sbjct: 200 GREGELG-----GGSPVAHRGTSLGTGVRDPAP 227
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>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2|
            precursor (LTBP-2)
          Length = 1842

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
 Frame = -1

Query: 214  GYEYDRA*TVLGPPDFH----GPPGA----HRTPRDVRCSSGHWTLPPAEPFPGLAGR*A 59
            GYEY       GP D H    GP G     +  P D           P   FP  AGR  
Sbjct: 1646 GYEYSP-----GPDDLHYSLYGPDGVPFYNYLGPEDAI---------PEPLFPSTAGRPG 1691

Query: 58   EKITLPEAPAGVSGL 14
            ++I LPE P   S L
Sbjct: 1692 DRIPLPEPPLQPSEL 1706
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>COAT_BWYVG (P09509) Coat protein|
          Length = 202

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
 Frame = +2

Query: 155 RRPMKIRRTEYRSRPVVLITASGLQGEQP--------LANGTM*AREVGKTDP*LREKDW 310
           RRP +  R   RS+PVV++  S     +P           GT+  R  G ++  +  KD 
Sbjct: 14  RRPRRQTRRAQRSQPVVVVQTSRATQRRPRRRRRGNNRTRGTVPTRGAGSSETFVFSKDN 73

Query: 311 L*GLGSGVPAPNPS 352
           L G  SG     PS
Sbjct: 74  LAGSSSGRITFGPS 87
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>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor|
          Length = 1712

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSS 116
           GPP F GPPG   TP  + C +
Sbjct: 642 GPPGFLGPPGPAGTPGQIDCDT 663
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>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor|
          Length = 1669

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = -1

Query: 184 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNV 5
           +GPP   GPPG    P     SSG   +   + FPG  G     +  P+   G  GLP +
Sbjct: 801 IGPPGAMGPPGGEGPPG----SSGPPGIKGEKGFPGFPGL---DMPGPKGDKGSQGLPGL 853
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>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor|
          Length = 1669

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = -1

Query: 184 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNV 5
           +GPP   GPPG    P      SG   +   + FPG  G     +  P+   G  GLP +
Sbjct: 801 IGPPGARGPPGGQGPPG----LSGPPGIKGEKGFPGFPGL---DMPGPKGDKGAQGLPGI 853
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>MAGE1_HUMAN (Q9HCI5) Melanoma-associated antigen E1 (MAGE-E1 antigen)|
           (Hepatocellular carcinoma-associated protein 1)
          Length = 957

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
 Frame = +1

Query: 67  GLPTLETVQPEVG-SSGRKSTARRAVSG-APPAAHENPEDRVPFTPGRTHNRIRSPR*TA 240
           GL T     P+ G S+    TA   +S   PP   E P   VP TPG   +    P   +
Sbjct: 219 GLSTSVQATPDEGPSTSVPPTATEGLSTPVPPTRDEGPSTSVPATPGEGPSTSVLPA-AS 277

Query: 241 SGQWNNV----GKGSRQNGSVTSGKGLA 312
            GQ  ++    GKGS  +   T+ +GL+
Sbjct: 278 DGQSISLVPTRGKGSSTSVPPTATEGLS 305
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>IF2_SYNEL (Q8DK04) Translation initiation factor IF-2|
          Length = 957

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -1

Query: 418 VPRPARGDPLSPREQLEQSANSRRVRGRDPRAQ 320
           VPRPAR  P++P  + E+S+  ++ R RD R +
Sbjct: 322 VPRPAR--PVTPAAKTEKSSEKKQSRHRDRRPE 352
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>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor|
          Length = 1806

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -1

Query: 187 VLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAG 68
           ++GPP   GP G    P D R   G   LP A+  PG  G
Sbjct: 452 IMGPPGLQGPTGPPGDPGD-RGPPGRPGLPGADGLPGPPG 490
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>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor|
          Length = 1763

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
 Frame = -1

Query: 205  YDRA*TVLGPPDFHGPPGAHRTPR-----DVRCSSGHWTLPPAEPFPGLAGR*AEK-ITL 44
            Y  A  + G P   G PGA   P        R + G    P     PGL G   E  +  
Sbjct: 1304 YAGAAGIKGEPGLPGIPGAKGEPGLSGIPGKRGNDGIPGKPGPAGLPGLPGMKGESGLPG 1363

Query: 43   PEAPAGVSGLPNV 5
            P+ PAG+ GLP +
Sbjct: 1364 PQGPAGLPGLPGL 1376



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
 Frame = -1

Query: 181  GPPDFHGPPGAHRTPRDVRCSSGHWTLP-----PAEP-------FPGLAGR*AEKITLPE 38
            G P   G PG    PR ++  +G    P     P  P        PGL G+  + IT P+
Sbjct: 1220 GLPGLEGQPG----PRGMKGEAGLPGAPGRDGLPGLPGMKGEAGLPGLPGQPGKSITGPK 1275

Query: 37   APAGVSGLP 11
              AG+ GLP
Sbjct: 1276 GNAGLPGLP 1284
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>TIF1B_MOUSE (Q62318) Transcription intermediary factor 1-beta (TIF1-beta)|
           (Tripartite motif protein 28) (KRAB-A-interacting
           protein) (KRIP-1)
          Length = 834

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = +1

Query: 94  PEVGSSGRKSTARRAVSGAPPAAHENPEDR---VPFT--PGRTHNRIRSP 228
           P  G +  K     A  GAPPAA E PE +   +P T  PG    R+ SP
Sbjct: 546 PLPGMAIVKEEETEAAIGAPPAAPEGPETKPVLMPLTEGPGAEGPRLASP 595
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>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (RPB1) (Fragment)
          Length = 467

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 217
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 205 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPNYSPTSPN 251



 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 217
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 198 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPN 244



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 191 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 236



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 184 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 229



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 177 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 222



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 170 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 215



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 163 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 208



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 156 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 201



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 149 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 194



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 142 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 187



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 135 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 180



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 128 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 173



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 121 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 166
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>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor|
           (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth
           factor-like domains 2) (Epidermal growth factor-like 1)
          Length = 3312

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -2

Query: 330 PEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPDAVMSTTGRERYSVLR-IFMGRR 154
           PE S   ++     GS+ P +L+  VP +   SP   D ++   G +  S  R    G R
Sbjct: 137 PEVSSCGRTGPLQRGSLSPGALSSGVPGSGNSSPLPSDFLIRHHGPKPVSSQRNAGTGSR 196

Query: 153 GRTGHRATCGALPATG 106
            R G    CG L ATG
Sbjct: 197 KRVGTARCCGELWATG 212
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>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RPB1)
          Length = 1970

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 217
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPNYSPTSPN 1754



 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 217
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPN 1747



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1739



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1732



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1725



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1718



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1711



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1704



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1697



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1690



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1683



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1676



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1669
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>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RPB1)
          Length = 1970

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 217
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPNYSPTSPN 1754



 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 217
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPN 1747



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1739



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1732



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1725



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1718



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1711



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1704



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1697



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1690



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1683



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1676



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1669
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>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
 Frame = -1

Query: 184  LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 17
            +GPP   GPPG           SG    P AE  PG  G    K     T P  P G  G
Sbjct: 989  MGPPGLAGPPG----------ESGREGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGAPG 1038

Query: 16   LP 11
             P
Sbjct: 1039 AP 1040



 Score = 28.1 bits (61), Expect = 8.6
 Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 10/70 (14%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFP----------GLAGR*AEKITLPEAP 32
           GP  F GPPG    P      SG    PP  P P          G  GR  E+   P  P
Sbjct: 186 GPQGFQGPPGEPGEPG----GSGPMG-PPGPPGPPGKNGDDGEAGKPGRPGER--GPPGP 238

Query: 31  AGVSGLPNVA 2
            G  GLP  A
Sbjct: 239 QGARGLPGTA 248
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>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
 Frame = -1

Query: 184  LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 17
            +GPP   GPPG           SG    P AE  PG  G    K     T P  P G  G
Sbjct: 989  MGPPGLAGPPG----------ESGREGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGAPG 1038

Query: 16   LP 11
             P
Sbjct: 1039 AP 1040
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>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor|
          Length = 1460

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
 Frame = -1

Query: 184  LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 17
            +GPP   GPPG           SG    P AE  PG  G    K     T P  P G  G
Sbjct: 996  MGPPGLAGPPG----------ESGREGSPGAEGSPGRDGSPGPKGDRGETGPAGPPGAPG 1045

Query: 16   LP 11
             P
Sbjct: 1046 AP 1047
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>RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1)
          Length = 1599

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPDAVMS 205
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P   +S
Sbjct: 1524 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPSYSVS 1574



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLA 244
            PT+  +   +P  SP S S+S +  S  PTS +Y V ++
Sbjct: 1538 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVSMS 1576



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1517 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1562



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1510 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1555



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1503 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1548



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1496 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1541



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1489 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1534



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1482 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1527



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1475 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1520



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1468 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1513
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>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI|
           domain-containing protein 2) (Emu2 protein) (Emilin and
           multimerin domain-containing protein 2)
          Length = 441

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPE 38
           GPP   GPPG   TP     +    T+ P+   PG+ G   EK    E
Sbjct: 314 GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGE-PGVKGEEGEKAATAE 360
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>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)|
            (Trio-associated repeat on actin)
          Length = 2365

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 27/96 (28%), Positives = 37/96 (38%)
 Frame = +1

Query: 67   GLPTLETVQPEVGSSGRKSTARRAVSGAPPAAHENPEDRVPFTPGRTHNRIRSPR*TASG 246
            G P+L   +   G+ G  S   +   G P A  E P   +P   G+     RSP  +   
Sbjct: 1463 GEPSLGAAKAPEGAWGGTSREYKESWGQPEAWEEKPTHELPRELGK-----RSPLTSPPE 1517

Query: 247  QWNNVGKGSRQNGSVTSGKGLALRTGLGGPGPEPVG 354
             W    + S+   S  SG   A+  G  G  P P G
Sbjct: 1518 NWGGPAESSQ---SWHSGTPTAVGWGAEGACPYPRG 1550
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>SFTA1_HUMAN (Q8IWL2) Pulmonary surfactant-associated protein A1 precursor|
           (SP-A1) (SP-A) (PSP-A) (PSPA) (Alveolar proteinosis
           protein) (35 kDa pulmonary surfactant-associated
           protein)
          Length = 248

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = -1

Query: 163 GPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 11
           GPPG    P ++ C  G+  LP A   PG  G   E         G  GLP
Sbjct: 55  GPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGE-----PGERGPPGLP 100
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>MAGD1_HUMAN (Q9Y5V3) Melanoma-associated antigen D1 (MAGE-D1 antigen)|
           (Neurotrophin receptor-interacting MAGE homolog) (MAGE
           tumor antigen CCF)
          Length = 778

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFP 80
           GPPD+ GPP     P         W LPP  P P
Sbjct: 394 GPPDWQGPPDWPLPP--------DWPLPPDWPLP 419
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>RPB1_DICDI (P35084) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (Fragment)
          Length = 902

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 814 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 859



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 807 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 852



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 800 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 845



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 793 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 838



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 786 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 831



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 779 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 824



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 730 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 775



 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 821 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPSSP 866
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>COAT_PLRV (P10470) Coat protein|
          Length = 208

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 149 RPRRPMKIRRTEYRSRPVVLITASG 223
           R RR   +RR   R +PVV++TASG
Sbjct: 18  RRRRRQSLRRRANRVQPVVMVTASG 42
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>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)|
          Length = 779

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = -1

Query: 184 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPE-APAGVSGLP 11
           +GPP   GPPG           SG    P AE  PG  G    K    E  PAG  G P
Sbjct: 562 MGPPGLAGPPG----------ESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGAPGPP 610
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>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor|
          Length = 675

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 22/57 (38%), Positives = 25/57 (43%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 11
           GPP  +GPPG                L PA P PG AG+    +  P  P G SGLP
Sbjct: 88  GPPGPNGPPG------------DRGALGPAGP-PGPAGK---GLPGPPGPPGPSGLP 128
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>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 59  CLTACQPWKRFSRR*GPVAGRAPHVARCPVRPR 157
           CL  CQ  +  S R GP   R P   R P  PR
Sbjct: 18  CLATCQSLQMGSVRKGPTGDRGPRGQRGPAGPR 50
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>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEA-PAGVSG 17
           GPP F G PG   T  +V    G   LP     PG AG   E+ T  E+  AG SG
Sbjct: 556 GPPGFQGLPGPSGTTGEVG-KPGERGLPGEFGLPGPAGPRGERGTPGESGAAGPSG 610
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>AP2_ARATH (P47927) Floral homeotic protein APETALA2|
          Length = 432

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 20  GDAGGGLGKSYLFCLTACQPWKRFSRR*GPVAGRAPHVARCPVRPRRPMKIRRTEYRSR 196
           G    G  +++ F +  CQ         G  AG+A +VA   V P +P+K  R   RSR
Sbjct: 74  GGVASGFPRAHWFGVKFCQS----DLATGSSAGKATNVAAAVVEPAQPLKKSRRGPRSR 128
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>MEI9_DROME (Q24087) Protein mei-9 (Protein meiotic 9)|
          Length = 961

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 379 EQLEQSANSRRVRGRDPRAQSSEPILFPKLRIRFADFPCL 260
           E  +++A SR+  G+ P+A    P +   +R   +D PCL
Sbjct: 673 EPTDENAKSRQAGGQAPQATKETPKVIVDMREFRSDLPCL 712
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>MAGD1_PIG (Q6ITT4) Melanoma-associated antigen D1 (MAGE-D1 antigen)|
          Length = 784

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFP 80
           GPPD+ GPP     P         W LPP  P P
Sbjct: 400 GPPDWQGPPDWPLPP--------DWPLPPDWPLP 425
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>TIF1B_HUMAN (Q13263) Transcription intermediary factor 1-beta (TIF1-beta)|
           (Tripartite motif protein 28) (Nuclear corepressor
           KAP-1) (KRAB-associated protein 1) (KAP-1)
           (KRAB-interacting protein 1) (KRIP-1) (RING finger
           protein 96)
          Length = 835

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 25/90 (27%), Positives = 32/90 (35%), Gaps = 5/90 (5%)
 Frame = +1

Query: 94  PEVGSSGRKSTARRAVSGAPPAAHENPEDR-----VPFTPGRTHNRIRSPR*TASGQWNN 258
           P  G +  K     A  GAPP A E PE +     +   PG    R+ SP          
Sbjct: 546 PLAGMAIVKEEETEAAIGAPPTATEGPETKPVLMALAEGPGAEGPRLASP---------- 595

Query: 259 VGKGSRQNGSVTSGKGLALRTGLGGPGPEP 348
                  +GS +SG  +    G   PG  P
Sbjct: 596 -------SGSTSSGLEVVAPEGTSAPGGGP 618
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>PCX3_MOUSE (Q8VI59) Pecanex-like protein 3|
          Length = 1620

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
 Frame = +1

Query: 64   NGLPTLETVQPEVGSSGRKSTARRAVSGAPPAAHENPEDRVPFTPGRTHNRIRSPR*TAS 243
            N   + E   P   S G + +   +  G PP   + P  R+P  P        SP  T  
Sbjct: 1454 NAAGSSEQPLPPGPSWGPRPSLSGSGDGRPPPLLQWPPPRLPGPPPA------SPAPTEG 1507

Query: 244  GQWNNVGKGSRQNGSVTSGK-GLALRTGLGGPGPEP 348
             + +     +  N    SGK  L  R GLGGP  EP
Sbjct: 1508 PRPSRPSGPALLNSEGPSGKWSLGGRKGLGGPDGEP 1543
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>EDA_BOVIN (Q9BEG5) Ectodysplasin-A (Ectodysplasin-1) (Ectodermal dysplasia|
           protein) [Contains: Ectodysplasin-A, membrane form;
           Ectodysplasin-A, secreted form]
          Length = 391

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 34/127 (26%), Positives = 45/127 (35%)
 Frame = -1

Query: 385 PREQLEQSANSRRVRGRDPRAQSSEPILFPKLRIRFADFPCLHCSIGQRLFTLET*CGYE 206
           P+E+      SRRVR R+ R++SSE           AD P  +   G++           
Sbjct: 141 PKEKSYSEEESRRVR-RNKRSKSSEG----------ADGPVKNKKKGKKA---------- 179

Query: 205 YDRA*TVLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAG 26
                   GPP  +GPPG    P       G    P     PG+ G        P  P G
Sbjct: 180 --------GPPGPNGPPGPPGPP-------GPQGPPGIPGIPGIPGTTVMGPPGPPGPPG 224

Query: 25  VSGLPNV 5
             G P +
Sbjct: 225 PQGPPGL 231
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>ZN694_HUMAN (Q63HK3) Zinc finger protein 694|
          Length = 967

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 187 VLGPPDFHGPPGAHRTPRDVRCSSG 113
           ++  P+F GPPG  ++P D    SG
Sbjct: 643 IVQEPEFQGPPGLLQSPNDFEIGSG 667
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>RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1852

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 360  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 220
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPSSP 1659
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>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -1

Query: 178 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGL 74
           PP  HGPP     P       G W  PP    P L
Sbjct: 260 PPPGHGPPPPQHQPSPYGGQQGGWAPPPRPYSPQL 294
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>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein|
           dumpy-15)
          Length = 296

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 21/60 (35%), Positives = 25/60 (41%)
 Frame = -1

Query: 181 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVA 2
           GPP   GPPGA   P +    +G    P  +  PG  G        P  PAG +G P  A
Sbjct: 148 GPPGPPGPPGAPGDPGE----AGTPGRPGTDAAPGSPGPRG-----PPGPAGEAGAPGPA 198
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>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
 Frame = -1

Query: 184  LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 17
            +GPP   GPPG           +G    P AE  PG  G    K     T P  P G  G
Sbjct: 989  MGPPGLAGPPG----------EAGREGAPGAEGAPGRDGAAGPKGDRGETGPAGPPGAPG 1038

Query: 16   LP 11
             P
Sbjct: 1039 AP 1040
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>GLT12_HUMAN (Q8IXK2) Polypeptide N-acetylgalactosaminyltransferase 12 (EC|
           2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase
           12) (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 12) (Polypeptide
           GalNAc transferase 12) (GalNAc-T12) (pp-GaNTas
          Length = 581

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
 Frame = -1

Query: 415 PRPARGDPLSPREQLEQSANSRRVRGRDPRAQ--------SSEPILFPKLRIRFADFPCL 260
           PRP R +P+ PR  +   AN+   RG   R Q          E +   ++ I  +D   L
Sbjct: 56  PRPGRREPVMPRPPV--PANALGARGEAVRLQLQGEELRLQEESVRLHQINIYLSDRISL 113

Query: 259 HCSIGQRLFTLET*CGYEYD 200
           H  + +R   L     Y+YD
Sbjct: 114 HRRLPERWNPLCKEKKYDYD 133
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>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -1

Query: 187 VLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAG 68
           ++GPP   GP G    P D R   G   LP A+  PG  G
Sbjct: 450 LMGPPGLQGPSGLPGDPGD-RGPPGRPGLPGADGLPGPPG 488


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.136    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,077,251
Number of Sequences: 219361
Number of extensions: 1735987
Number of successful extensions: 6813
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 5616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6728
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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