ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast43a04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191514.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 297 bits (150), Expect = 1e-77 Identities = 253/288 (87%), Gaps = 12/288 (4%) Strand = Plus / Plus Query: 119 cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 169 |||||||||||||||| |||||||||| |||||||||| | |||||| ||| Sbjct: 65 cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 124 Query: 170 cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 229 |||||||||| ||||||||||||||||| || |||| ||| |||||| ||||| | Sbjct: 125 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 181 Query: 230 gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 289 ||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||| Sbjct: 182 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 241 Query: 290 agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 349 |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 242 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 301 Query: 350 tctacggcgccgactggggctccatccccgtctccgtcgccgacgacg 397 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 302 tctacggcgccgactggggctccatccccgtctccgtctccgacgacg 349
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 297 bits (150), Expect = 1e-77 Identities = 253/288 (87%), Gaps = 12/288 (4%) Strand = Plus / Minus Query: 119 cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 169 |||||||||||||||| |||||||||| |||||||||| | |||||| ||| Sbjct: 33194679 cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 33194620 Query: 170 cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 229 |||||||||| ||||||||||||||||| || |||| ||| |||||| ||||| | Sbjct: 33194619 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 33194563 Query: 230 gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 289 ||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||| Sbjct: 33194562 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 33194503 Query: 290 agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 349 |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 33194502 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 33194443 Query: 350 tctacggcgccgactggggctccatccccgtctccgtcgccgacgacg 397 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 33194442 tctacggcgccgactggggctccatccccgtctccgtctccgacgacg 33194395 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 cctgcgccccggcgacgccgt 317 ||||||||||||||||||||| Sbjct: 26377205 cctgcgccccggcgacgccgt 26377225 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cgcaaaaaccctagccagct 51 |||||||||||||||||||| Sbjct: 13217038 cgcaaaaaccctagccagct 13217019 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 ggcgctgccgccggtgcgcc 136 |||||||||||||||||||| Sbjct: 9052561 ggcgctgccgccggtgcgcc 9052580
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 297 bits (150), Expect = 1e-77 Identities = 253/288 (87%), Gaps = 12/288 (4%) Strand = Plus / Minus Query: 119 cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 169 |||||||||||||||| |||||||||| |||||||||| | |||||| ||| Sbjct: 131589 cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 131530 Query: 170 cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 229 |||||||||| ||||||||||||||||| || |||| ||| |||||| ||||| | Sbjct: 131529 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 131473 Query: 230 gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 289 ||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||| Sbjct: 131472 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 131413 Query: 290 agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 349 |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 131412 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 131353 Query: 350 tctacggcgccgactggggctccatccccgtctccgtcgccgacgacg 397 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131352 tctacggcgccgactggggctccatccccgtctccgtctccgacgacg 131305
>dbj|AK072280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C18, full insert sequence Length = 1337 Score = 297 bits (150), Expect = 1e-77 Identities = 253/288 (87%), Gaps = 12/288 (4%) Strand = Plus / Plus Query: 119 cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 169 |||||||||||||||| |||||||||| |||||||||| | |||||| ||| Sbjct: 315 cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 374 Query: 170 cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 229 |||||||||| ||||||||||||||||| || |||| ||| |||||| ||||| | Sbjct: 375 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 431 Query: 230 gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 289 ||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||| Sbjct: 432 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 491 Query: 290 agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 349 |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 492 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 551 Query: 350 tctacggcgccgactggggctccatccccgtctccgtcgccgacgacg 397 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 552 tctacggcgccgactggggctccatccccgtctccgtctccgacgacg 599
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 281 bits (142), Expect = 9e-73 Identities = 178/190 (93%) Strand = Plus / Plus Query: 210 cgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 269 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65462 cgcctcctccccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 65521 Query: 270 cgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctcca 329 |||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 65522 cgccgtcaagtggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctcca 65581 Query: 330 cgtgcgccccacctccgtcctctacggcgccgactggggctccatccccgtctccgtcgc 389 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 65582 cgtccgccccacctccgtgctctacggcgccgactggggctccatccccgtctccgtcga 65641 Query: 390 cgacgacgac 399 |||||||||| Sbjct: 65642 cgacgacgac 65651 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 123 gccgccggtgcgcctcgcggcggggcaggcggcgacgatccagccctcctcgccgcgcta 182 ||||||||||||||| |||| ||| ||||||| ||||||||||| ||||||||| | Sbjct: 65369 gccgccggtgcgcctggcggggggtgcggcggcggcgatccagcccaactcgccgcggtt 65428 Query: 183 cttcttctcctcgctggc 200 |||||||||||||||||| Sbjct: 65429 cttcttctcctcgctggc 65446
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 281 bits (142), Expect = 9e-73 Identities = 178/190 (93%) Strand = Plus / Plus Query: 210 cgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 269 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24551280 cgcctcctccccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 24551339 Query: 270 cgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctcca 329 |||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 24551340 cgccgtcaagtggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctcca 24551399 Query: 330 cgtgcgccccacctccgtcctctacggcgccgactggggctccatccccgtctccgtcgc 389 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 24551400 cgtccgccccacctccgtgctctacggcgccgactggggctccatccccgtctccgtcga 24551459 Query: 390 cgacgacgac 399 |||||||||| Sbjct: 24551460 cgacgacgac 24551469 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 123 gccgccggtgcgcctcgcggcggggcaggcggcgacgatccagccctcctcgccgcgcta 182 ||||||||||||||| |||| ||| ||||||| ||||||||||| ||||||||| | Sbjct: 24551187 gccgccggtgcgcctggcggggggtgcggcggcggcgatccagcccaactcgccgcggtt 24551246 Query: 183 cttcttctcctcgctggc 200 |||||||||||||||||| Sbjct: 24551247 cttcttctcctcgctggc 24551264
>dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C02, full insert sequence Length = 1118 Score = 281 bits (142), Expect = 9e-73 Identities = 178/190 (93%) Strand = Plus / Plus Query: 210 cgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 269 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 cgcctcctccccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 305 Query: 270 cgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctcca 329 |||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 306 cgccgtcaagtggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctcca 365 Query: 330 cgtgcgccccacctccgtcctctacggcgccgactggggctccatccccgtctccgtcgc 389 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 366 cgtccgccccacctccgtgctctacggcgccgactggggctccatccccgtctccgtcga 425 Query: 390 cgacgacgac 399 |||||||||| Sbjct: 426 cgacgacgac 435 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 123 gccgccggtgcgcctcgcggcggggcaggcggcgacgatccagccctcctcgccgcgcta 182 ||||||||||||||| |||| ||| ||||||| ||||||||||| ||||||||| | Sbjct: 153 gccgccggtgcgcctggcggggggtgcggcggcggcgatccagcccaactcgccgcggtt 212 Query: 183 cttcttctcctcgctggc 200 |||||||||||||||||| Sbjct: 213 cttcttctcctcgctggc 230
>gb|BT017743.1| Zea mays clone EL01N0449E08.c mRNA sequence Length = 1322 Score = 260 bits (131), Expect = 3e-66 Identities = 227/259 (87%) Strand = Plus / Plus Query: 142 gcggggcaggcggcgacgatccagccctcctcgccgcgctacttcttctcctcgctggcc 201 |||| ||||||||| ||||||||||||| || ||||||| ||||||||||||||| ||| Sbjct: 218 gcggcgcaggcggccgcgatccagccctcgtccccgcgcttcttcttctcctcgcttgcc 277 Query: 202 ggcaaggacgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgag 261 || | || | |||||| ||||| ||||||||||||||||| || |||||||||||| Sbjct: 278 gggaccaacccggcctccccgcaccgtcgcatcgccatcgccgttgatctctccgacgag 337 Query: 262 tccgccttcgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtg 321 ||||||||||| || |||||||||||||||||| | |||||||| |||||||||||| Sbjct: 338 tccgccttcgcagtcaagtgggccgtgcagaactacgtccgccccggggacgccgtcgtg 397 Query: 322 ctcctccacgtgcgccccacctccgtcctctacggcgccgactggggctccatccccgtc 381 || |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 398 ctgctccacgtgcgccccacctccgtcctctacggcgccgactggggttccatcccggtc 457 Query: 382 tccgtcgccgacgacgacg 400 |||||||| ||||| |||| Sbjct: 458 tccgtcgctgacgaggacg 476
>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence Length = 213888 Score = 226 bits (114), Expect = 4e-56 Identities = 219/254 (86%) Strand = Plus / Minus Query: 147 gcaggcggcgacgatccagccctcctcgccgcgctacttcttctcctcgctggccggcaa 206 ||||||||| | ||||||||||| || ||||||| ||||||||||||||| | ||| | Sbjct: 4942 gcaggcggccgcaatccagccctcttccccgcgcttcttcttctcctcgcttgtcgggac 4883 Query: 207 ggacgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgc 266 || | |||||| ||||| |||||||||||||||| || ||| |||||||||||| Sbjct: 4882 caacccggcctccccgcaccgtcgcatcgccatcgccgctgatctcaacgacgagtccgc 4823 Query: 267 cttcgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcct 326 |||||| || |||||||||||||||||||| |||||||| |||||||||||||| || Sbjct: 4822 cttcgcagtcaagtgggccgtgcagaactacctccgccccggggacgccgtcgtgctgct 4763 Query: 327 ccacgtgcgccccacctccgtcctctacggcgccgactggggctccatccccgtctccgt 386 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4762 ccatgtgcgccccacctccgtcctctacggcgccgactggggctccatcccggtctccgt 4703 Query: 387 cgccgacgacgacg 400 ||| ||||| |||| Sbjct: 4702 cgctgacgaggacg 4689
>gb|BT016476.1| Zea mays clone Contig309 mRNA sequence Length = 1258 Score = 206 bits (104), Expect = 4e-50 Identities = 137/148 (92%) Strand = Plus / Minus Query: 222 ccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctg 281 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 982 ccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctacgccgtgcgctg 923 Query: 282 ggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccac 341 |||||| |||||||| |||||||| ||||||||| | || ||||||||||||||||| Sbjct: 922 ggccgtcgccaactacctccgccccggggacgccgtcatcctgctccacgtgcgccccac 863 Query: 342 ctccgtcctctacggcgccgactggggc 369 |||||| ||||||||||||||||||||| Sbjct: 862 ctccgtgctctacggcgccgactggggc 835
>ref|XM_478654.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1330 Score = 163 bits (82), Expect = 5e-37 Identities = 133/150 (88%) Strand = Plus / Plus Query: 223 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 282 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 221 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 280 Query: 283 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 342 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 281 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 340 Query: 343 tccgtcctctacggcgccgactggggctcc 372 ||||| |||||||||||||||||||||||| Sbjct: 341 tccgtgctctacggcgccgactggggctcc 370
>ref|XM_478653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1352 Score = 163 bits (82), Expect = 5e-37 Identities = 133/150 (88%) Strand = Plus / Plus Query: 223 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 282 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 266 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 325 Query: 283 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 342 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 326 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 385 Query: 343 tccgtcctctacggcgccgactggggctcc 372 ||||| |||||||||||||||||||||||| Sbjct: 386 tccgtgctctacggcgccgactggggctcc 415
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 163 bits (82), Expect = 5e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 223 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 282 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 21844767 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 21844708 Query: 283 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 342 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 21844707 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 21844648 Query: 343 tccgtcctctacggcgccgactggggctcc 372 ||||| |||||||||||||||||||||||| Sbjct: 21844647 tccgtgctctacggcgccgactggggctcc 21844618 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cgcaaaaaccctagccagct 51 |||||||||||||||||||| Sbjct: 25783338 cgcaaaaaccctagccagct 25783319 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 ccgtctccgtcgccgacgacgacg 400 ||||| |||||||||||||||||| Sbjct: 5819728 ccgtcgccgtcgccgacgacgacg 5819705
>dbj|AK109507.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E04, full insert sequence Length = 1351 Score = 163 bits (82), Expect = 5e-37 Identities = 133/150 (88%) Strand = Plus / Plus Query: 223 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 282 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 266 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 325 Query: 283 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 342 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 326 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 385 Query: 343 tccgtcctctacggcgccgactggggctcc 372 ||||| |||||||||||||||||||||||| Sbjct: 386 tccgtgctctacggcgccgactggggctcc 415
>dbj|AK060720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F04, full insert sequence Length = 1330 Score = 163 bits (82), Expect = 5e-37 Identities = 133/150 (88%) Strand = Plus / Plus Query: 223 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 282 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 221 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 280 Query: 283 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 342 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 281 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 340 Query: 343 tccgtcctctacggcgccgactggggctcc 372 ||||| |||||||||||||||||||||||| Sbjct: 341 tccgtgctctacggcgccgactggggctcc 370
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 163 bits (82), Expect = 5e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 223 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 282 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 58443 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 58384 Query: 283 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 342 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 58383 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 58324 Query: 343 tccgtcctctacggcgccgactggggctcc 372 ||||| |||||||||||||||||||||||| Sbjct: 58323 tccgtgctctacggcgccgactggggctcc 58294
>gb|AY104155.1| Zea mays PCO077380 mRNA sequence Length = 1011 Score = 125 bits (63), Expect = 1e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 313 gccgtcgtgctcctccacgtgcgccccacctccgtcctctacggcgccgactggggctcc 372 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 12 gccgtcgtgctgctccacgtgcgccccacctccgttctctacggcgccgactggggttcc 71 Query: 373 atccccgtctccgtcgccgacga 395 ||||| ||||||||||| ||||| Sbjct: 72 atcccggtctccgtcgctgacga 94
>gb|AY104923.1| Zea mays PCO144363 mRNA sequence Length = 982 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 363 ctggggctccatccccgtctccgtcgccgacgac 396 ||||||||||||||| |||||||||| ||||||| Sbjct: 1 ctggggctccatcccggtctccgtcgacgacgac 34
>ref|XM_480848.1| Oryza sativa (japonica cultivar-group), mRNA Length = 492 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 366 gggctccatccccgtctccgtcgccgacga 395 |||||||||||| |||||||||| |||||| Sbjct: 366 gggctccatccctgtctccgtcgacgacga 395
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 cgatccagccctcctcgccgcg 179 |||||||||||||||||||||| Sbjct: 22160494 cgatccagccctcctcgccgcg 22160515
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 366 gggctccatccccgtctccgtcgccgacga 395 |||||||||||| |||||||||| |||||| Sbjct: 8182897 gggctccatccctgtctccgtcgacgacga 8182868 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ccgtcgccgacgacgacgcg 402 |||||||||||||||||||| Sbjct: 25216491 ccgtcgccgacgacgacgcg 25216510
>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1047A05 Length = 157517 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 366 gggctccatccccgtctccgtcgccgacga 395 |||||||||||| |||||||||| |||||| Sbjct: 151208 gggctccatccctgtctccgtcgacgacga 151179
>dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_H02 Length = 117860 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 366 gggctccatccccgtctccgtcgccgacga 395 |||||||||||| |||||||||| |||||| Sbjct: 15579 gggctccatccctgtctccgtcgacgacga 15550
>dbj|AK065586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034O12, full insert sequence Length = 3418 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 cgatccagccctcctcgccgcg 179 |||||||||||||||||||||| Sbjct: 67 cgatccagccctcctcgccgcg 88
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 cgatccagccctcctcgccgcg 179 |||||||||||||||||||||| Sbjct: 22088839 cgatccagccctcctcgccgcg 22088860
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155585 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 158 cgatccagccctcctcgccgcg 179 |||||||||||||||||||||| Sbjct: 92516 cgatccagccctcctcgccgcg 92495
>ref|NM_185697.1| Oryza sativa (japonica cultivar-group), Ozsa8048 predicted mRNA Length = 2760 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 369 ctccatccccgtctccgtcgccgacgacg 397 ||||||||||||||||||| ||| ||||| Sbjct: 2325 ctccatccccgtctccgtctccggcgacg 2353
>ref|NM_185687.1| Oryza sativa (japonica cultivar-group), Ozsa8038 predicted mRNA Length = 2760 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 369 ctccatccccgtctccgtcgccgacgacg 397 ||||||||||||||||||| ||| ||||| Sbjct: 2325 ctccatccccgtctccgtctccggcgacg 2353
>ref|XM_471059.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 372 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 ccgtctccgtcgccgacgacg 397 ||||||||||||||||||||| Sbjct: 25 ccgtctccgtcgccgacgacg 5
>ref|NM_192393.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1458 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 cctgcgccccggcgacgccgt 317 ||||||||||||||||||||| Sbjct: 1264 cctgcgccccggcgacgccgt 1244
>ref|XM_532850.2| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 3, transcript variant 1 (LOC475637), mRNA Length = 8193 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 gcaggcggcgacgatccagccctcctcgc 175 |||||||||| || ||||||||||||||| Sbjct: 2158 gcaggcggcgccggtccagccctcctcgc 2130
>ref|XM_852730.1| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 3, transcript variant 3 (LOC475637), mRNA Length = 8328 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 gcaggcggcgacgatccagccctcctcgc 175 |||||||||| || ||||||||||||||| Sbjct: 2293 gcaggcggcgccggtccagccctcctcgc 2265
>ref|XM_852690.1| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 3, transcript variant 2 (LOC475637), mRNA Length = 8508 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 gcaggcggcgacgatccagccctcctcgc 175 |||||||||| || ||||||||||||||| Sbjct: 2521 gcaggcggcgccggtccagccctcctcgc 2493
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 132 gcgcctcgcggcggggcaggcggcgacga 160 |||| |||||||| ||||||||||||||| Sbjct: 181808 gcgcatcgcggcgcggcaggcggcgacga 181836
>gb|AY665904.1| Physalis minima isolate PMINM 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 633 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 cccctccccgtcggccggcgg 101 ||||||||||||||||||||| Sbjct: 85 cccctccccgtcggccggcgg 105
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 gcaggcggcgacgatccagccctcc 171 |||||||| |||||||||||||||| Sbjct: 1397567 gcaggcggtgacgatccagccctcc 1397543
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 ccgtctccgtcgccgacgacg 397 ||||||||||||||||||||| Sbjct: 1089281 ccgtctccgtcgccgacgacg 1089301
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 ctccatccccgtctccgtcgccgacgacg 397 ||||||||||||||||||| ||| ||||| Sbjct: 3871782 ctccatccccgtctccgtctccggcgacg 3871754 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 ctccatccccgtctccgtcgccgacgacg 397 ||||||||||||||||||| ||| ||||| Sbjct: 3833726 ctccatccccgtctccgtctccggcgacg 3833698
>gb|AE004646.1| Pseudomonas aeruginosa PAO1, section 207 of 529 of the complete genome Length = 11244 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ccgaccccggcgctgccgccg 129 ||||||||||||||||||||| Sbjct: 615 ccgaccccggcgctgccgccg 595
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 cctgcgccccggcgacgccgt 317 ||||||||||||||||||||| Sbjct: 51070 cctgcgccccggcgacgccgt 51090
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 ctccatccccgtctccgtcgccgacgacg 397 ||||||||||||||||||| ||| ||||| Sbjct: 129736 ctccatccccgtctccgtctccggcgacg 129708 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 ctccatccccgtctccgtcgccgacgacg 397 ||||||||||||||||||| ||| ||||| Sbjct: 91680 ctccatccccgtctccgtctccggcgacg 91652
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 cgctgccgccggtgcgcctcgcggc 143 ||||||||||||||||| ||||||| Sbjct: 1709107 cgctgccgccggtgcgcatcgcggc 1709131
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 ccgtctccgtcgccgacgacg 397 ||||||||||||||||||||| Sbjct: 517349 ccgtctccgtcgccgacgacg 517369
>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07, complete sequence Length = 167895 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 ccgtctccgtcgccgacgacg 397 ||||||||||||||||||||| Sbjct: 31650 ccgtctccgtcgccgacgacg 31670
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 cgaccccggcgctgccgccg 129 |||||||||||||||||||| Sbjct: 236712 cgaccccggcgctgccgccg 236731
>ref|XM_483276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2775 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ccgtcgccgacgacgacgcg 402 |||||||||||||||||||| Sbjct: 205 ccgtcgccgacgacgacgcg 186
>ref|XM_464429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 912 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 297 cctgcgccccggcgacgccgtcgtgctcctcc 328 |||| ||| ||||||||||| ||||||||||| Sbjct: 506 cctgggcctcggcgacgccgacgtgctcctcc 537
>ref|XM_506741.1| PREDICTED Oryza sativa (japonica cultivar-group), P0453H10.33 mRNA Length = 994 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 297 cctgcgccccggcgacgccgtcgtgctcctcc 328 |||| ||| ||||||||||| ||||||||||| Sbjct: 504 cctgggcctcggcgacgccgacgtgctcctcc 535
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cccggcgacgccgtcgtgct 323 |||||||||||||||||||| Sbjct: 18701 cccggcgacgccgtcgtgct 18720
>ref|XM_477083.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 ccgtctccgtcgccgacgacgacg 400 ||||| |||||||||||||||||| Sbjct: 362 ccgtcgccgtcgccgacgacgacg 339
>gb|BT016220.1| Zea mays clone Contig53 mRNA sequence Length = 1159 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 ccgtctccgtcgccgacgacgacg 400 ||||| |||||||||||||||||| Sbjct: 442 ccgtccccgtcgccgacgacgacg 419
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ccggcgctgccgccggtgcg 134 |||||||||||||||||||| Sbjct: 2097685 ccggcgctgccgccggtgcg 2097704
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 ctacctgcgccccggcgacg 313 |||||||||||||||||||| Sbjct: 2906396 ctacctgcgccccggcgacg 2906377
>gb|AC135562.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0087P19, complete sequence Length = 172066 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 cgcaaaaaccctagccagct 51 |||||||||||||||||||| Sbjct: 73508 cgcaaaaaccctagccagct 73527
>ref|XM_422007.1| PREDICTED: Gallus gallus similar to LOC129881 protein (LOC424161), mRNA Length = 3873 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gggccgtgcagaactacctg 300 |||||||||||||||||||| Sbjct: 2331 gggccgtgcagaactacctg 2312
>gb|BC044179.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated protein 2, mRNA (cDNA clone MGC:55477 IMAGE:2640312), complete cds Length = 2292 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggccaactccaacccctcc 87 |||||||||||||||||||| Sbjct: 169 cggccaactccaacccctcc 188
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 ctacctgcgccccggcgacgccgt 317 ||||||||||||||||||| |||| Sbjct: 2585057 ctacctgcgccccggcgacaccgt 2585034
>gb|BC067543.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated protein 2, mRNA (cDNA clone MGC:85610 IMAGE:6523980), complete cds Length = 2352 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggccaactccaacccctcc 87 |||||||||||||||||||| Sbjct: 166 cggccaactccaacccctcc 185
>emb|AL672141.12| Mouse DNA sequence from clone RP23-219C18 on chromosome 11 Contains the 3' end of the Hs3st3a gene for heparan sulfate (glucosamine) 3-O-sulfotransferase 3A and a CpG island, complete sequence Length = 153658 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 agccagctgcccagctcccc 63 |||||||||||||||||||| Sbjct: 93995 agccagctgcccagctcccc 93976
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 gcgccccggcgacgccgtcgtgct 323 |||||||| ||||||||||||||| Sbjct: 29999 gcgccccgtcgacgccgtcgtgct 29976
>ref|NM_213496.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated protein 2 (prpsap2), mRNA Length = 2352 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggccaactccaacccctcc 87 |||||||||||||||||||| Sbjct: 166 cggccaactccaacccctcc 185
>gb|DQ084026.1| Zea mays magnesium chelatase subunit I precursor (ChlI) gene, ChlI-W22 allele, partial cds Length = 1455 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 gtcgccgacgacgacgcgga 404 |||||||||||||||||||| Sbjct: 612 gtcgccgacgacgacgcgga 593
>gb|DQ084025.1| Zea mays magnesium chelatase subunit I precursor (ChlI) mRNA, ChlI-W22 allele, complete cds Length = 1248 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 gtcgccgacgacgacgcgga 404 |||||||||||||||||||| Sbjct: 405 gtcgccgacgacgacgcgga 386
>gb|AE005727.1| Caulobacter crescentus CB15 section 53 of 359 of the complete genome Length = 10545 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccgccttcgccgtgcgctgg 282 |||||||||||||||||||| Sbjct: 5837 ccgccttcgccgtgcgctgg 5856
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cccggcgctgccgccggtgc 133 |||||||||||||||||||| Sbjct: 838360 cccggcgctgccgccggtgc 838341
>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence Length = 207283 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ggggctccatccccgtctcc 384 |||||||||||||||||||| Sbjct: 24112 ggggctccatccccgtctcc 24093
>ref|NM_164719.1| Drosophila melanogaster CG32829-RA (CG32829), mRNA Length = 705 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 164 agccctcctcgccgcgctacttcttctcctcg 195 |||||| ||||||| ||| ||||||||||||| Sbjct: 655 agcccttctcgccgtgctccttcttctcctcg 624
>gb|AC099010.1| Drosophila melanogaster, chromosome 2L, region 27B-27C, BAC clone BACR20B21, complete sequence Length = 166512 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 164 agccctcctcgccgcgctacttcttctcctcg 195 |||||| ||||||| ||| ||||||||||||| Sbjct: 57091 agcccttctcgccgtgctccttcttctcctcg 57060
>emb|BX537342.6| Zebrafish DNA sequence from clone CH211-198P11 in linkage group 3, complete sequence Length = 195436 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cggccaactccaacccctcc 87 |||||||||||||||||||| Sbjct: 15599 cggccaactccaacccctcc 15580
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 254 ccgacgagtccgccttcgccgtgcgctg 281 |||||||| |||||||||||| |||||| Sbjct: 972315 ccgacgaggccgccttcgccgagcgctg 972288
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 cgcaaaaaccctagccagct 51 |||||||||||||||||||| Sbjct: 10177344 cgcaaaaaccctagccagct 10177363
>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR13J07, complete sequence Length = 174287 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 164 agccctcctcgccgcgctacttcttctcctcg 195 |||||| ||||||| ||| ||||||||||||| Sbjct: 22595 agcccttctcgccgtgctccttcttctcctcg 22626
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cctgcgccccggcgacgccgtcgtgctcctcc 328 |||| ||| ||||||||||| ||||||||||| Sbjct: 5167485 cctgggcctcggcgacgccgacgtgctcctcc 5167454
>gb|AC137834.9| Homo sapiens 12 BAC RP11-123K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109523 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 gcctcctcccaccaccgccg 230 |||||||||||||||||||| Sbjct: 96600 gcctcctcccaccaccgccg 96619
>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 ggcgctgccgccggtgcgcc 136 |||||||||||||||||||| Sbjct: 81568 ggcgctgccgccggtgcgcc 81587
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 ccgtctccgtcgccgacgacgacg 400 ||||| |||||||||||||||||| Sbjct: 126756 ccgtcgccgtcgccgacgacgacg 126733
>dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487E11 Length = 151303 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cgcaaaaaccctagccagct 51 |||||||||||||||||||| Sbjct: 89339 cgcaaaaaccctagccagct 89320
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cctgcgccccggcgacgccgtcgtgctcctcc 328 |||| ||| ||||||||||| ||||||||||| Sbjct: 127983 cctgggcctcggcgacgccgacgtgctcctcc 127952
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cctgcgccccggcgacgccgtcgtgctcctcc 328 |||| ||| ||||||||||| ||||||||||| Sbjct: 60938 cctgggcctcggcgacgccgacgtgctcctcc 60907
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ccgtcgccgacgacgacgcg 402 |||||||||||||||||||| Sbjct: 81614 ccgtcgccgacgacgacgcg 81633
>dbj|AK120531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127H23, full insert sequence Length = 6225 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ggcgctgccgccggtgcgcc 136 |||||||||||||||||||| Sbjct: 391 ggcgctgccgccggtgcgcc 372
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cgcaaaaaccctagccagct 51 |||||||||||||||||||| Sbjct: 100500 cgcaaaaaccctagccagct 100481
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 actacctgcgccccggcgac 312 |||||||||||||||||||| Sbjct: 2917971 actacctgcgccccggcgac 2917990
>dbj|AK065909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E11, full insert sequence Length = 912 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 297 cctgcgccccggcgacgccgtcgtgctcctcc 328 |||| ||| ||||||||||| ||||||||||| Sbjct: 506 cctgggcctcggcgacgccgacgtgctcctcc 537
>dbj|AK063732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-E09, full insert sequence Length = 869 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 ccgtctccgtcgccgacgacgacg 400 ||||| |||||||||||||||||| Sbjct: 30 ccgtcgccgtcgccgacgacgacg 7
>dbj|AK061629.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H06, full insert sequence Length = 994 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 297 cctgcgccccggcgacgccgtcgtgctcctcc 328 |||| ||| ||||||||||| ||||||||||| Sbjct: 504 cctgggcctcggcgacgccgacgtgctcctcc 535
>gb|AY109514.1| Zea mays CL865_1 mRNA sequence Length = 1376 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 gtcgccgacgacgacgcgga 404 |||||||||||||||||||| Sbjct: 422 gtcgccgacgacgacgcgga 403
>gb|AY104097.1| Zea mays PCO131882 mRNA sequence Length = 1083 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 ccgtctccgtcgccgacgacgacg 400 ||||| |||||||||||||||||| Sbjct: 346 ccgtccccgtcgccgacgacgacg 323
>gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24 of 83 of the complete sequence Length = 270751 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 164 agccctcctcgccgcgctacttcttctcctcg 195 |||||| ||||||| ||| ||||||||||||| Sbjct: 159089 agcccttctcgccgtgctccttcttctcctcg 159120
>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for lipoxygenase, complete cds Length = 3007 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ccgtcgccgacgacgacgcg 402 |||||||||||||||||||| Sbjct: 323 ccgtcgccgacgacgacgcg 304
>gb|AF058419.1|HSLRPSS45 Homo sapiens lipoprotein receptor-related protein (LRP1), exons 45 through 55 Length = 3875 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gcctcctcccaccaccgccg 230 |||||||||||||||||||| Sbjct: 3389 gcctcctcccaccaccgccg 3370
>gb|DQ314873.1| Homo sapiens low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) (LRP1) gene, complete cds Length = 88248 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gcctcctcccaccaccgccg 230 |||||||||||||||||||| Sbjct: 69306 gcctcctcccaccaccgccg 69287
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cgccgtcgtgctcctccacg 331 |||||||||||||||||||| Sbjct: 3498554 cgccgtcgtgctcctccacg 3498535
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 cgcaaaaaccctagccagct 51 |||||||||||||||||||| Sbjct: 10249041 cgcaaaaaccctagccagct 10249060
>gb|AC004277.1|AC004277 Drosophila melanogaster DNA sequence (P1 DS01321 (D143)), complete sequence Length = 82849 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 164 agccctcctcgccgcgctacttcttctcctcg 195 |||||| ||||||| ||| ||||||||||||| Sbjct: 15167 agcccttctcgccgtgctccttcttctcctcg 15136 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,104,096 Number of Sequences: 3902068 Number of extensions: 3104096 Number of successful extensions: 82711 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79278 Number of HSP's gapped (non-prelim): 3418 length of query: 408 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 386 effective length of database: 17,147,199,772 effective search space: 6618819111992 effective search space used: 6618819111992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
