ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast43a03 |
|---|---|
| Clone Library Name | barley_pub |
>LEAD8_DAUCA (P20075) Embryonic protein DC-8| Length = 555 Score = 45.4 bits (106), Expect = 8e-05 Identities = 22/39 (56%), Positives = 25/39 (64%) Frame = +1 Query: 355 GGAKDTAADKTYQAADATGNKLGEYKDYTAEKAKETNDS 471 G KD AA K +A DAT K GEYKDY A+K ET D+ Sbjct: 235 GEYKDYAAQKAAEAKDATMQKTGEYKDYAAQKTAETKDA 273 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/36 (58%), Positives = 26/36 (72%) Frame = +1 Query: 364 KDTAADKTYQAADATGNKLGEYKDYTAEKAKETNDS 471 K+ AA K +A DAT K GEYKDY+A+KA ET D+ Sbjct: 282 KEYAAQKAAEAKDATMQKTGEYKDYSAQKAAETKDA 317 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/57 (42%), Positives = 30/57 (52%) Frame = +1 Query: 301 ESVQEGAXSLASAVGRTFGGAKDTAADKTYQAADATGNKLGEYKDYTAEKAKETNDS 471 E + A A + G KD +A K + DAT K EYKDYTA+KA ET D+ Sbjct: 283 EYAAQKAAEAKDATMQKTGEYKDYSAQKAAETKDATMEKTKEYKDYTAQKAAETKDA 339 Score = 44.3 bits (103), Expect = 2e-04 Identities = 29/98 (29%), Positives = 45/98 (45%) Frame = +1 Query: 184 EMDARRAADEISRARADREHGALGGGAYVEHPRGGGGILESVQEGAXSLASAVGRTFGGA 363 ++ A++A + +A+ ++ G Y ++ E +E A A G Sbjct: 98 DVAAQKAEEAKEKAKMAKDTTMGKAGEYKDYTAQKA---EEAKEKAAQKAEETKEKAGEY 154 Query: 364 KDTAADKTYQAADATGNKLGEYKDYTAEKAKETNDSLA 477 K+ A K +A D T K GEYKDY A+KA E D+ A Sbjct: 155 KNYTAQKAGEAKDTTLGKAGEYKDYAAQKAAEAKDTTA 192 Score = 43.1 bits (100), Expect = 4e-04 Identities = 20/35 (57%), Positives = 22/35 (62%) Frame = +1 Query: 364 KDTAADKTYQAADATGNKLGEYKDYTAEKAKETND 468 KD +K +A D T K GEYKDY AEKAKE D Sbjct: 337 KDATMEKAKEAKDTTVQKTGEYKDYAAEKAKEGKD 371 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/56 (41%), Positives = 33/56 (58%) Frame = +1 Query: 304 SVQEGAXSLASAVGRTFGGAKDTAADKTYQAADATGNKLGEYKDYTAEKAKETNDS 471 + Q+ A + + + +T G KD AA KT + DAT K EYK+Y A+KA E D+ Sbjct: 241 AAQKAAEAKDATMQKT-GEYKDYAAQKTAETKDATMEKAKEYKEYAAQKAAEAKDA 295 Score = 38.9 bits (89), Expect = 0.007 Identities = 21/37 (56%), Positives = 24/37 (64%) Frame = +1 Query: 361 AKDTAADKTYQAADATGNKLGEYKDYTAEKAKETNDS 471 AK AA K +A D TG K GEYKDY A+KA E D+ Sbjct: 216 AKVLAAQKAAEAKDTTG-KDGEYKDYAAQKAAEAKDA 251 Score = 35.4 bits (80), Expect = 0.078 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 7/59 (11%) Frame = +1 Query: 304 SVQEGAXSLASAVGRTFGGAKDTAADKTYQAADATGNKL-------GEYKDYTAEKAKE 459 + Q+ + + +G+ G KD AA K +A D T K GEYKDY A+KA E Sbjct: 158 TAQKAGEAKDTTLGKA-GEYKDYAAQKAAEAKDTTAQKAAEAKEKTGEYKDYAAQKAAE 215
>ISH1_SCHPO (Q9Y7X6) Stress response protein ish1| Length = 684 Score = 33.5 bits (75), Expect = 0.30 Identities = 30/107 (28%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Frame = +1 Query: 178 QAEMDARRAADEISRARADREHGALGGGAYVEHPRGGGGILESVQEGAXSLASAVGRTFG 357 +A +A AD S ++ GA E +G EGA + A +V F Sbjct: 346 KAYEEASNVADSASSIASNVASGA------TEAYQGAASGASRFTEGAKTAAESVTSAFE 399 Query: 358 GAKDTAADKTYQA-------ADATGNKLGEYKDYTAEKAKETNDSLA 477 KDTA K Q K+GE DY AE A + A Sbjct: 400 HNKDTATSKAKQMKGKAASLGSTASEKVGEAADYAAETASKVASKAA 446
>LEA3_MAIZE (Q42376) Late embryogenesis abundant protein, group 3 (LEA)| Length = 221 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Frame = +1 Query: 343 GRTFGGAKDTAADKTYQAADATGNKLG---EYKDYTAEKAKETNDSL 474 G+ G KDTA +AADA G+ G + K+ T +KA +T L Sbjct: 24 GQAVGATKDTAQHAKDRAADAAGHAAGKGQDAKEATKQKASDTGSYL 70
>SOX21_MOUSE (Q811W0) Transcription factor SOX-21| Length = 276 Score = 31.2 bits (69), Expect = 1.5 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Frame = +1 Query: 229 ADREHGALGGGAYVEHPRGGGGILESV----QEGAXSLASAVGRTFGGAKDTAADKTYQA 396 AD EH AL GA + GGG + ES+ ++ A + A+A R F AA A Sbjct: 104 ADAEHPALKAGAGLHAGAGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAA 163 Query: 397 ADA 405 A A Sbjct: 164 AAA 166
>SOX21_HUMAN (Q9Y651) Transcription factor SOX-21 (SOX-A)| Length = 276 Score = 31.2 bits (69), Expect = 1.5 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Frame = +1 Query: 229 ADREHGALGGGAYVEHPRGGGGILESV----QEGAXSLASAVGRTFGGAKDTAADKTYQA 396 AD EH AL GA + GGG + ES+ ++ A + A+A R F AA A Sbjct: 104 ADAEHPALKAGAGLHAGAGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAA 163 Query: 397 ADA 405 A A Sbjct: 164 AAA 166
>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) (Ca(2+)-inhibitable adenylyl cyclase) Length = 1265 Score = 30.8 bits (68), Expect = 1.9 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +1 Query: 199 RAADEISRARADREHGALGGGAYVEHPRGGGG 294 R D+ R R GA GGG+ P GGGG Sbjct: 123 RGGDDCGRGSRRRRRGAAGGGSSRAPPAGGGG 154
>LEA1_HORVU (P14928) ABA-inducible protein PHV A1| Length = 213 Score = 30.8 bits (68), Expect = 1.9 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 7/68 (10%) Frame = +1 Query: 289 GGILESVQEGAXSLASAVGRTFGGAKD-------TAADKTYQAADATGNKLGEYKDYTAE 447 G E+ ++ A +T AKD A ++ Q D TG+ LGE + + Sbjct: 57 GETAEAAKQKAAEAKDKTAQTAQAAKDKTYETAQAAKERAAQGKDQTGSALGEKTEAAKQ 116 Query: 448 KAKETNDS 471 KA ET ++ Sbjct: 117 KAAETTEA 124
>LEA29_GOSHI (P13940) Late embryogenesis abundant protein D-29 (LEA D-29)| Length = 302 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Frame = +1 Query: 328 LASAVGRTFGGA----KDTAADKTYQAADATGNKLGEYKDYTAEKAKETNDS 471 +AS G G KDTA KT +A K E + T EKA+E DS Sbjct: 142 MASGAGEYSAGKAKDMKDTAYKKTDDVKNAAKGKSSEMRQATTEKARELADS 193
>Y1339_HAEIN (P71378) Protein HI1339/HI1462.1| Length = 129 Score = 30.4 bits (67), Expect = 2.5 Identities = 16/60 (26%), Positives = 30/60 (50%) Frame = +1 Query: 298 LESVQEGAXSLASAVGRTFGGAKDTAADKTYQAADATGNKLGEYKDYTAEKAKETNDSLA 477 + V+E A L++ V + A + A +A K+GE K+ +EKA E ++++ Sbjct: 55 MTEVKEKAQQLSTDVKNKVAEKVEDAKEVIKSATEAASEKVGEMKEAASEKASEMKEAVS 114
>OLEO1_MAIZE (P13436) Oleosin Zm-I (Oleosin 16 kDa) (Lipid body-associated major| protein) (Lipid body-associated protein L3) Length = 156 Score = 30.0 bits (66), Expect = 3.3 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 6/51 (11%) Frame = +1 Query: 229 ADREHGAL-GGGAYVEHPRGGGGILESVQ---EGA--XSLASAVGRTFGGA 363 AD GA GGG Y + RGGG E+ Q +GA +L +A TFGG+ Sbjct: 2 ADHHRGATGGGGGYGDLQRGGGMHGEAQQQQKQGAMMTALKAATAATFGGS 52
>CLPB_BIFLO (Q8G4X4) Chaperone clpB| Length = 889 Score = 29.6 bits (65), Expect = 4.3 Identities = 30/96 (31%), Positives = 39/96 (40%) Frame = +1 Query: 172 VMQAEMDARRAADEISRARADREHGALGGGAYVEHPRGGGGILESVQEGAXSLASAVGRT 351 + QAE + ++ DE EH +G A P ILE A SL AV Sbjct: 91 IAQAEKEMQQMGDEY----VSTEHLLIGIAA--SKPNQSAEILEKNGVTAASLRKAVPGV 144 Query: 352 FGGAKDTAADKTYQAADATGNKLGEYKDYTAEKAKE 459 GGAK T+ D A+ + L +Y AKE Sbjct: 145 RGGAKVTSPD-----AEGSYKALEKYSTDLTAAAKE 175
>DNAJ_RHITR (Q93S23) Chaperone protein dnaJ (Fragment)| Length = 331 Score = 29.3 bits (64), Expect = 5.6 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 9/70 (12%) Frame = +1 Query: 208 DEISRARADR------EHGALGGGAYVEHPRGGGG---ILESVQEGAXSLASAVGRTFGG 360 D RA DR EHG +GGG GGGG I E + A GR+ GG Sbjct: 37 DPQKRAAYDRYGHAAFEHGGMGGGGGFGAGFGGGGFSDIFEDIFGEMMGGGRARGRSSGG 96 Query: 361 AKDTAADKTY 390 ++ AD Y Sbjct: 97 -RERGADLRY 105
>VG01_EHV1V (P84394) Hypothetical gene 1 protein| Length = 202 Score = 28.5 bits (62), Expect = 9.6 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -1 Query: 350 VRPTALARDXAPSCTLSRMPPPPRG 276 +RP ++R A S ++S PPPP G Sbjct: 1 MRPEGVSRGRASSVSISMCPPPPNG 25
>VG01_EHV1H (P84450) Hypothetical gene 1 protein| Length = 202 Score = 28.5 bits (62), Expect = 9.6 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -1 Query: 350 VRPTALARDXAPSCTLSRMPPPPRG 276 +RP ++R A S ++S PPPP G Sbjct: 1 MRPEGVSRGRASSVSISMCPPPPNG 25
>VG01_EHV1B (P28978) Hypothetical gene 1 protein| Length = 202 Score = 28.5 bits (62), Expect = 9.6 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -1 Query: 350 VRPTALARDXAPSCTLSRMPPPPRG 276 +RP ++R A S ++S PPPP G Sbjct: 1 MRPEGVSRGRASSVSISMCPPPPNG 25
>HEX_ADE06 (Q04966) Hexon protein (Late protein 2) (Fragment)| Length = 465 Score = 28.5 bits (62), Expect = 9.6 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 3/91 (3%) Frame = +1 Query: 181 AEMDARRAADE---ISRARADREHGALGGGAYVEHPRGGGGILESVQEGAXSLASAVGRT 351 A++DA+ +E + A+A + A Y + P G ++ +EG + +A Sbjct: 22 AQVDAQELDEEENEANEAQAREQEQAKKTHVYAQAPLSG---IKITKEGL-QIGTADATV 77 Query: 352 FGGAKDTAADKTYQAADATGNKLGEYKDYTA 444 G K+ ADKT+Q G D TA Sbjct: 78 AGAGKEIFADKTFQPEPQVGESQWNEADATA 108
>ADCY5_RABIT (P40144) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) Length = 1264 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 199 RAADEISRARADREHGALGGGAYVEHPRGGGGILESVQEGAXSLASAVGRT 351 R D+ R + GA GGG+ P GGG G+ + A+A G T Sbjct: 109 RGGDDCGRGSRRQRRGAAGGGSTRAPPAGGG-----CGGGSAAAAAAAGGT 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.308 0.125 0.342 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,896,408 Number of Sequences: 219361 Number of extensions: 412391 Number of successful extensions: 1745 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1671 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1732 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
