ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast42h12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VRP1_YEAST (P37370) Verprolin 28 7.3
2PLCG1_BOVIN (P08487) 1-phosphatidylinositol-4,5-bisphosphate pho... 28 7.3

>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 1   PPLPSSNAADLPSTAAVPP 57
           PP+P+S+A  LP TA  PP
Sbjct: 315 PPIPTSHAPPLPPTAPPPP 333



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>PLCG1_BOVIN (P08487) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
           gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
           (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II)
           (PLC-148)
          Length = 1291

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 10  PSSNAADLPSTAAVPPQRHHRRLLSPLGD 96
           PS+   ++ S AA+ P+R H    SPLGD
Sbjct: 842 PSNYVEEMVSPAALEPEREHLDENSPLGD 870


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.132    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,380,773
Number of Sequences: 219361
Number of extensions: 101379
Number of successful extensions: 354
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of database: 80,573,946
effective HSP length: 8
effective length of database: 78,819,058
effective search space used: 1891657392
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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