>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 44.1 bits (22), Expect = 0.070
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 58      cagcgtcaccaccggcgcctcc 79
               ||||||||||||||||||||||
Sbjct: 1206215 cagcgtcaccaccggcgcctcc 1206194

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 58      cagcgtcaccaccggcgcct 77
               ||||||||||||||||||||
Sbjct: 2587517 cagcgtcaccaccggcgcct 2587536

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      gtcaccaccggcgcctcctc 81
               ||||||||||||||||||||
Sbjct: 2731401 gtcaccaccggcgcctcctc 2731382

>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0710H01
          Length = 187107

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    cagcgtcaccaccggcgcct 77
             ||||||||||||||||||||
Sbjct: 42858 cagcgtcaccaccggcgcct 42877

>dbj|AK072773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138L23, full
           insert sequence
          Length = 970

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 58  cagcgtcaccaccggcgcct 77
           ||||||||||||||||||||
Sbjct: 374 cagcgtcaccaccggcgcct 355

>ref|XM_482938.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 765

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 43  gccgctgtgccgccccagc 61
           |||||||||||||||||||
Sbjct: 201 gccgctgtgccgccccagc 183

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 53      cgccccagcgtcaccaccg 71
               |||||||||||||||||||
Sbjct: 3618714 cgccccagcgtcaccaccg 3618732

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 3       tcctcttccaagttccaac 21
               |||||||||||||||||||
Sbjct: 3001884 tcctcttccaagttccaac 3001866

>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13
          Length = 349563

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     cgccccagcgtcaccaccg 71
              |||||||||||||||||||
Sbjct: 156151 cgccccagcgtcaccaccg 156169

>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14
          Length = 308050

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     cgccccagcgtcaccaccg 71
              |||||||||||||||||||
Sbjct: 135414 cgccccagcgtcaccaccg 135432

>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0011L14, complete sequence
          Length = 117974

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     tcctcttccaagttccaac 21
             |||||||||||||||||||
Sbjct: 94377 tcctcttccaagttccaac 94395

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 61      cgtcaccaccggcgcctcc 79
               |||||||||||||||||||
Sbjct: 1289200 cgtcaccaccggcgcctcc 1289218

>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15,
              complete sequence
          Length = 166282

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      tcctcttccaagttccaac 21
              |||||||||||||||||||
Sbjct: 139350 tcctcttccaagttccaac 139332

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 43       gccgctgtgccgccccagc 61
                |||||||||||||||||||
Sbjct: 23468430 gccgctgtgccgccccagc 23468412

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 3       tcctcttccaagttccaac 21
               |||||||||||||||||||
Sbjct: 3001974 tcctcttccaagttccaac 3001956

>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_E05
          Length = 126978

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 43    gccgctgtgccgccccagc 61
             |||||||||||||||||||
Sbjct: 59845 gccgctgtgccgccccagc 59827


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 573,127
Number of Sequences: 3902068
Number of extensions: 573127
Number of successful extensions: 38095
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37745
Number of HSP's gapped (non-prelim): 350
length of query: 98
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 77
effective length of database: 17,151,101,840
effective search space: 1320634841680
effective search space used: 1320634841680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)