ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast42h09 |
|---|---|
| Clone Library Name | barley_pub |
>PHOP1_HUMAN (Q8TCT1) Phosphoethanolamine/phosphocholine phosphatase (EC| 3.1.3.75) Length = 267 Score = 45.8 bits (107), Expect = 2e-05 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 5/106 (4%) Frame = +1 Query: 97 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTLR 267 ++ FDFD+TI+D +SD+ +V L + L T +N + V L QG R Sbjct: 28 LLTFDFDETIVDENSDDSIVRAAPGQRLPESLRATYREGFYNEYMQRVFKYLGEQGVRPR 87 Query: 268 DVADVLRAAPIDPHVVAAIRAAYSLGC--DLRVLSDANRFFIEAVL 399 D++ + A P+ P + ++ G ++ ++SDAN F +E+ L Sbjct: 88 DLSAIYEAIPLSPGMSDLLQFVAKQGACFEVILISDANTFGVESSL 133
>PHOP1_MOUSE (Q8R2H9) Phosphoethanolamine/phosphocholine phosphatase (EC| 3.1.3.75) Length = 267 Score = 44.3 bits (103), Expect = 7e-05 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 5/106 (4%) Frame = +1 Query: 97 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTLR 267 ++ FDFD+TI+D +SD+ +V +L + L T +N + V L QG R Sbjct: 28 LLTFDFDETIVDENSDDSIVRAAPGQQLPESLRATYREGYYNEYMQRVFKYLGEQGVRPR 87 Query: 268 DVADVLRAAPIDPHVVAAIRAAYSLGC--DLRVLSDANRFFIEAVL 399 D+ V P+ P + ++ G ++ ++SDAN F +E+ L Sbjct: 88 DLRAVYETIPLSPGMGDLLQFIAKQGSCFEVILISDANTFGVESAL 133
>PHOP2_XENTR (Q66KD6) Probable phosphatase phospho2 (EC 3.1.3.-)| Length = 238 Score = 43.9 bits (102), Expect = 9e-05 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%) Frame = +1 Query: 97 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTM---PWNTLIDTVMGELHAQGKTLR 267 ++VFDFD TII+ +SD W+V + +L + L + W + V L QG Sbjct: 4 LLVFDFDHTIINDNSDTWIVQCVPGKKLPNGLQNSYEKGKWTEYMGRVFSYLGEQGIREE 63 Query: 268 DVADVLRAAPIDP------HVVAAIRAAYSLGCDLRVLSDANRFFIEAVL 399 D+ ++ A P P H + + ++ D ++SD+N FI+ +L Sbjct: 64 DMKRIMIAIPYTPGMTDLLHFIGQNKDSF----DCIIISDSNTIFIDWIL 109
>PHOP2_HUMAN (Q8TCD6) Pyridoxal phosphate phosphatase PHOSPHO2 (EC 3.1.3.74)| Length = 241 Score = 40.0 bits (92), Expect = 0.001 Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 5/108 (4%) Frame = +1 Query: 94 VVVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTL 264 +++VFDFD TIID +SD W+V +L L + W + V L +G Sbjct: 3 ILLVFDFDNTIIDDNSDTWIVQCAPNKKLPIELRDSYRKGFWTEFMGRVFKYLGDKGVRE 62 Query: 265 RDVADVLRAAPIDPHVVAAIR--AAYSLGCDLRVLSDANRFFIEAVLD 402 ++ + + P P +V D ++SD+N FI+ VL+ Sbjct: 63 HEMKRAVTSLPFTPGMVELFNFIRKNKDKFDCIIISDSNSVFIDWVLE 110
>PHOP2_MOUSE (Q9D9M5) Pyridoxal phosphate phosphatase PHOSPHO2 (EC 3.1.3.74)| Length = 241 Score = 39.7 bits (91), Expect = 0.002 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 6/109 (5%) Frame = +1 Query: 94 VVVVFDFDKTIIDVDSDNWVV----DGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKT 261 V++VFDFD TIID +SD W+V D EL D + W + V L +G Sbjct: 3 VLLVFDFDNTIIDDNSDTWIVQCAPDKKLPIELQDSYQKGL-WTEFMGRVFKYLRDEGVK 61 Query: 262 LRDVADVLRAAPIDPHVVAAIR--AAYSLGCDLRVLSDANRFFIEAVLD 402 ++ + + P ++ + D ++SD+N FI+ VL+ Sbjct: 62 ADELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLE 110
>PHOP2_RAT (Q66HC4) Pyridoxal phosphate phosphatase PHOSPHO2 (EC 3.1.3.74)| Length = 241 Score = 39.3 bits (90), Expect = 0.002 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 6/109 (5%) Frame = +1 Query: 94 VVVVFDFDKTIIDVDSDNWVV----DGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKT 261 V++VFDFD TIID +SD W++ D EL D + W + V L +G Sbjct: 3 VLLVFDFDNTIIDDNSDTWIIQCAPDKKLPIELQDSYQKGL-WTEFMGRVFKYLRDEGVK 61 Query: 262 LRDVADVLRAAPIDPHVVAAIR--AAYSLGCDLRVLSDANRFFIEAVLD 402 ++ + + P ++ + D ++SD+N FI+ VL+ Sbjct: 62 EEELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLE 110
>PHOP1_BRARE (Q6DBV4) Probable phosphatase phospho1 (EC 3.1.3.-)| Length = 279 Score = 35.0 bits (79), Expect = 0.043 Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 6/107 (5%) Frame = +1 Query: 97 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTM---PWNTLIDTVMGELHAQGKT-- 261 ++ FDFD+T++D SD+ +V L L T +N + V+ L QG T Sbjct: 37 LMFFDFDETLVDECSDDSMVSAAPGGVLPGWLKDTYRPGRYNEYMQRVLAYLSEQGVTPA 96 Query: 262 -LRDVADVLRAAPIDPHVVAAIRAAYSLGCDLRVLSDANRFFIEAVL 399 +R + L P P ++ + + S ++ +SDAN FIE L Sbjct: 97 AIRATVEKLPPCPGIPALMHFLLSQPSRDFEVVCVSDANTVFIETWL 143
>PHOP1_CHICK (O73884) Phosphoethanolamine/phosphocholine phosphatase (EC| 3.1.3.75) (3X11A) Length = 268 Score = 34.3 bits (77), Expect = 0.073 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 6/107 (5%) Frame = +1 Query: 97 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTLR 267 ++VFDFD TII+ SD+ +V L + + + +N + V+ + QG + Sbjct: 28 LLVFDFDGTIINESSDDSIVRAAPGQALPEHIRQSFREGFYNEYMQRVLAYMGDQGVKMG 87 Query: 268 DVADVLRAAPID---PHVVAAIRAAYSLGCDLRVLSDANRFFIEAVL 399 D V P+ P + + + L ++ ++SDAN F IE L Sbjct: 88 DFKAVYENIPLSPGMPDLFQFLSKNHEL-FEIILISDANMFGIECKL 133
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 32.7 bits (73), Expect = 0.21 Identities = 21/81 (25%), Positives = 34/81 (41%) Frame = -1 Query: 320 AATTCGSMGAARSTSATSRRVLPCACSSPITVSMRVFHGMVGSRRSKSSVAPRPXXXXXX 141 ++++ S ++ S+S++S + S PIT S H S S SS + RP Sbjct: 181 SSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSF 240 Query: 140 XXXXXXXXXXSNTTTTPAIST 78 S T TP+ S+ Sbjct: 241 ITTMSSSTFISTVTVTPSSSS 261
>GLMM_ZYMMO (Q5NNT4) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 445 Score = 32.0 bits (71), Expect = 0.36 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 6/91 (6%) Frame = +1 Query: 91 GVVVVFDFDKTIIDVDSDNWVVDG-----LGATELFDRLLPTMPWNTLIDTVMGELHAQG 255 G+ + D D+ II VD +VDG L AT R L + NT + TVM L + Sbjct: 237 GIALDGDADRVII-VDEKGEIVDGDQIMALIATSAQKRNL--LKGNTTVATVMSNLGLER 293 Query: 256 KTLRDVADVLRAAPIDPHVVAAIRA-AYSLG 345 + +LR D HVV A+RA Y++G Sbjct: 294 YLSKLGIQLLRTQVGDRHVVEAMRAGGYTVG 324
>ITA6_CHICK (P26007) Integrin alpha-6 precursor (VLA-6) [Contains: Integrin| alpha-6 heavy chain; Integrin alpha-6 light chain] Length = 1072 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 82 EMAGVVVVFDFDKTIIDVDSDNWVVDGLGATELFDR 189 E G+ F +D ++D++SD W +GA + FDR Sbjct: 302 EGEGLASSFGYDVAVVDLNSDGWQDIVVGAPQYFDR 337
>ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f antigen)| [Contains: Integrin alpha-6 heavy chain; Integrin alpha-6 light chain] Length = 1091 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +1 Query: 91 GVVVVFDFDKTIIDVDSDNWVVDGLGATELFDR 189 G+ F +D ++D+++D W +GA + FDR Sbjct: 311 GLASSFGYDVAVVDLNADGWQDIVIGAPQYFDR 343
>ITA6_HUMAN (P23229) Integrin alpha-6 precursor (VLA-6) (CD49f antigen)| [Contains: Integrin alpha-6 heavy chain; Integrin alpha-6 light chain] Length = 1130 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 91 GVVVVFDFDKTIIDVDSDNWVVDGLGATELFDR 189 G+ F +D ++D++ D W +GA + FDR Sbjct: 350 GLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDR 382
>TKRA_ECOLI (P37666) 2-ketogluconate reductase (EC 1.1.1.215) (2KR)| (2-ketoaldonate reductase) Length = 324 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = +1 Query: 127 IDVDSDNWVVDGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKTLRDVADVLRA 291 I V DN+ VD L A ++ PT+ T+ DT+M + + + + +VA+ ++A Sbjct: 73 ISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKA 127
>TKRA_ECO57 (P58220) 2-ketogluconate reductase (EC 1.1.1.215) (2KR)| (2-ketoaldonate reductase) Length = 324 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = +1 Query: 127 IDVDSDNWVVDGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKTLRDVADVLRA 291 I V DN+ VD L A ++ PT+ T+ DT+M + + + + +VA+ ++A Sbjct: 73 ISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKA 127
>GLMM_SYNPX (Q7U9H6) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 462 Score = 28.1 bits (61), Expect = 5.2 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Frame = +1 Query: 91 GVVVVFDFD---KTIIDVDSDNWVVDGLGATELFDRLLP---TMPWNTLIDTVMGELHAQ 252 G V+ F FD ++ VD+ VVDG L+ +L +P + L+ TVM L + Sbjct: 242 GAVMGFAFDGDADRMLAVDARGRVVDGDHVLYLWGSVLQDQKALPGDRLVATVMSNLGFE 301 Query: 253 GKTLRDVADVLRAAPIDPHVVAAIRA 330 R ++ R D HV AA+ A Sbjct: 302 RAWERRGGELERTPVGDQHVHAAMVA 327
>ATG9_ASHGO (Q75A48) Autophagy-related protein 9| Length = 897 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +1 Query: 184 DRLLPTMPWNTLIDTVMGELHAQGKTLRDVADVLRAAPIDPHVVA 318 D+ L T+PW ++I +M L Q +V +V ID H VA Sbjct: 353 DKELQTIPWQSVIHQIM-RLKDQNAVTANVVEVKAKNHIDAHDVA 396
>GLGX_MYCTU (P0A4Y4) Glycogen operon protein glgX homolog (EC 3.2.1.-)| Length = 721 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Frame = +1 Query: 103 VFDFDKTIIDVDSDNWVVDGLGAT-------ELFDRLLPTMPWNTLIDTVMGELHAQGKT 261 ++ +D +D DS +VD LG T FD P +TV+ E H +G T Sbjct: 125 LYSYDVNAVDPDSTPPMVDSLGHTMTSVVINPFFDWAYDRSPRTPYHETVIYEAHVKGMT 184
>GLGX_MYCBO (P0A4Y5) Glycogen operon protein glgX homolog (EC 3.2.1.-)| Length = 721 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Frame = +1 Query: 103 VFDFDKTIIDVDSDNWVVDGLGAT-------ELFDRLLPTMPWNTLIDTVMGELHAQGKT 261 ++ +D +D DS +VD LG T FD P +TV+ E H +G T Sbjct: 125 LYSYDVNAVDPDSTPPMVDSLGHTMTSVVINPFFDWAYDRSPRTPYHETVIYEAHVKGMT 184
>FUT13_ARATH (Q9C8W3) Alpha-(1,4)-fucosyltransferase (EC 2.4.1.-) (FT4-M)| (Galactoside 3(4)-L-fucosyltransferase) (FucTC) (AtFUT13) Length = 401 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = -1 Query: 401 SRTASMKKRLASLRTLRSQPRL*AALMAATTCGSMGAARSTSATSRRVLPCACSSPIT 228 S+ SM++ A ++ L P + A CG MG T A S LPC I+ Sbjct: 335 SKFGSMQELAAYVKRLGDDPVAYSEYHAWRRCGLMGNYGKTRAVSLDTLPCRLCEEIS 392
>YHCW_BACSU (P54607) Hypothetical protein yhcW| Length = 220 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = +1 Query: 100 VVFDFDKTIIDVDSDNWVVDGLGATELFDR---LLPTMPWNTLIDTVMG 237 ++FDFD I+D ++ + V E+F+ +LP W +I T G Sbjct: 5 LIFDFDGLILDTETHEYEV----LQEIFEEHGSVLPLSVWGKVIGTAAG 49
>YDIK_SHIFL (P0AFS8) UPF0118 inner membrane protein ydiK| Length = 370 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +1 Query: 145 NWVVDGLG----ATELFDRLLPTMPWNTLIDTVMGELHAQGKTLRDVADVLRAAPIDPHV 312 N +VDG G A D LP + W I + +L+A L D+ A + P++ Sbjct: 87 NSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYI 146
>YDIK_ECOLI (P0AFS7) UPF0118 inner membrane protein ydiK| Length = 370 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +1 Query: 145 NWVVDGLG----ATELFDRLLPTMPWNTLIDTVMGELHAQGKTLRDVADVLRAAPIDPHV 312 N +VDG G A D LP + W I + +L+A L D+ A + P++ Sbjct: 87 NSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYI 146
>SURE_PELLD (Q3B5Y2) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 259 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = +1 Query: 223 DTVMGE-LHAQGKTLRDVADVLRAAPIDPHVVAAIRAAYSLGCDLRV--LSDANRFF 384 D + GE +H +++ + +V AP +PH + + A +LG LR+ NRFF Sbjct: 16 DGIEGEGIHVLAASMKKLGNVTVVAPAEPH--SGMSHAMTLGVPLRIREFRRNNRFF 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,138,033 Number of Sequences: 219361 Number of extensions: 375973 Number of successful extensions: 1527 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1510 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1524 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
