ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast42h01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 ... 79 5e-15
2E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (... 77 1e-14
3E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 ... 77 2e-14
4E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 ... 77 2e-14
5EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 ... 50 2e-06
6E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 ... 45 8e-05
7E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 ... 43 4e-04
8EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudo... 39 0.004
9GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precur... 38 0.009
10PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regula... 37 0.021
11EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudo... 32 0.87
12PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regula... 31 1.5
13YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor 30 1.9
14VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein ... 29 4.3
15ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7.... 29 5.7
16VANG2_HUMAN (Q9ULK5) Vang-like protein 2 (Van Gogh-like protein ... 29 5.7
17KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-as... 29 5.7
18RSMB_VIBCH (Q9KVU5) Ribosomal RNA small subunit methyltransferas... 28 7.4
19MBD1_HUMAN (Q9UIS9) Methyl-CpG-binding domain protein 1 (Methyl-... 28 9.7

>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 501

 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = +3

Query: 198 YCVRKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 374
           +C+ K   +   +Q A+D+ACG G  DC+ +     C++P  VVAH +YA N+YYQK   
Sbjct: 360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGK 419

Query: 375 MGATCDFMGVATLTGADPS 431
              +CDF GVAT+T  DPS
Sbjct: 420 ASGSCDFKGVATVTTTDPS 438



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>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 461

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 37/78 (47%), Positives = 44/78 (56%)
 Frame = +3

Query: 198 YCVRKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGM 377
           +CV K  AN   +Q  I+YACG   DC  I S G CF P S+ AH SY  N+YYQ N   
Sbjct: 377 WCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHT 435

Query: 378 GATCDFMGVATLTGADPS 431
              CDF G   +T +DPS
Sbjct: 436 DLACDFKGTGIVTSSDPS 453



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>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 402

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
 Frame = +3

Query: 198 YCVRKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 374
           YC+     +   +Q A+D+ACG G ++C++I     C+QP +V  H S+A NSYYQK   
Sbjct: 272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGR 331

Query: 375 MGATCDFMGVATLTGADPS 431
              +CDF GVA +T  DPS
Sbjct: 332 ASGSCDFKGVAMITTTDPS 350



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>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 505

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +3

Query: 192 AMYCVRKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKN 368
           +M+CV K+DA+   +   +++ACG+G A+C  I    PC+ P  V +H S+A N YYQK 
Sbjct: 360 SMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKM 419

Query: 369 AGMGATCDFMGVATLTGADPS 431
              G TCDF G A  T  DPS
Sbjct: 420 KSAGGTCDFDGTAITTTRDPS 440



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>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Anther-specific protein A6)
          Length = 478

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +3

Query: 195 MYCVRKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 371
           ++CV    AN   +++ +  AC +    C  +     C++P+S+  H SYA NSY+ +  
Sbjct: 388 VWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFR 447

Query: 372 GMGATCDFMGVATLTGADP 428
                C F G+A  T  +P
Sbjct: 448 NQSIQCFFNGLAHETTTNP 466



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>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 484

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
 Frame = +3

Query: 198 YCVRKSDANPVAMQ--KAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 371
           +C+   +AN    Q   ++ YAC   ADCT +     C   +++  + SYA NSYYQ + 
Sbjct: 365 WCILAPNANLQDPQLGPSVSYACDH-ADCTSLGYGSSCGN-LNLAQNVSYAFNSYYQVSN 422

Query: 372 GMGATCDFMGVATLTGADPS 431
            + + C F G++ ++  DPS
Sbjct: 423 QLDSACKFPGLSIVSTRDPS 442



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>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 477

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +3

Query: 198 YCVRKSDA--NPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 371
           +CV K +   +   +  A+ YAC  G DCT +     C   +    + SYA NSYYQ   
Sbjct: 362 WCVMKPNVRLDDPQVAPAVSYACSLG-DCTSLGVGTSCAN-LDGKQNISYAFNSYYQIQD 419

Query: 372 GMGATCDFMGVATLTGADPS 431
            +   C F  ++ +T  DPS
Sbjct: 420 QLDTACKFPNISEVTKTDPS 439



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>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal|
           development 1)
          Length = 549

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
 Frame = +3

Query: 186 SDAMYCVRKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 350
           S ++ CV   + +        DY C K  DC+ I +N        + P       S+  N
Sbjct: 373 SSSLKCVVADNVSTDDYSDLFDYVCAK-IDCSGINANATTGDYGAYSPCGAKDKLSFVLN 431

Query: 351 SYYQKNAGMGATCDFMGVATLTGADPSA 434
            YY++     + CDF G A+L  A  ++
Sbjct: 432 LYYEEQNESKSACDFSGSASLQSASTAS 459



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>GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precursor|
           (Glycoprotein GP115)
          Length = 559

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
 Frame = +3

Query: 201 CVRKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACNSYYQK 365
           CV   D +    +   ++ C +  DC+ I++NG       +   +     S+  N YY+K
Sbjct: 379 CVVSDDVDSDDYETLFNWICNE-VDCSGISANGTAGKYGAYSFCTPKEQLSFVMNLYYEK 437

Query: 366 NAGMGATCDFMGVATLTGADPSA 434
           + G  + C F G ATL  A   A
Sbjct: 438 SGGSKSDCSFSGSATLQTATTQA 460



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>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)|
          Length = 546

 Score = 37.0 bits (84), Expect = 0.021
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
 Frame = +3

Query: 186 SDAMYCVRKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 350
           S ++ CV     +         Y C K  DC  I +NG       + P       S+  N
Sbjct: 375 SASLKCVVDDKVDSDDYSDLFSYICAK-IDCDGINANGTTGEYGAYSPCHSKDKLSFVMN 433

Query: 351 SYYQKNAGMGATCDFMGVATLTGA 422
            YY++N    + CDF G A+L  A
Sbjct: 434 LYYEQNKESKSACDFGGSASLQSA 457



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>EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudohyphal|
           development 2)
          Length = 549

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
 Frame = +3

Query: 186 SDAMYCVRKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACN 350
           S +  CV   D +           CG   DC  I++NG       F   S     SY  N
Sbjct: 385 SQSFNCVVADDVDAEDYSTLFGEVCGY-IDCGDISANGNTGEYGGFSFCSDKDRLSYVLN 443

Query: 351 SYYQKNAGMGATCDFMGVATL 413
            YY         CDF G A++
Sbjct: 444 QYYHDQNERADACDFAGSASI 464



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>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)|
          Length = 548

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
 Frame = +3

Query: 186 SDAMYCVRKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YAC 347
           S ++ CV   D +           CG   DC+ I+++G   +   V + CS      Y  
Sbjct: 385 SKSLECVVADDVDKEDYGDLFGQVCGY-IDCSAISADGSKGE-YGVASFCSDKDRLSYVL 442

Query: 348 NSYYQKNAGMGATCDFMGVATL 413
           N YY       + CDF G A++
Sbjct: 443 NQYYLDQDKKSSACDFKGSASI 464



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>YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor|
          Length = 542

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 6/80 (7%)
 Frame = +3

Query: 201 CVRKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YACNSYYQ 362
           CV   D +         Y C +   C  IT+NG         ++C       Y  ++YY 
Sbjct: 376 CVINDDVSSDDYSDLFSYVCNE-ISCDGITANGTYPGQYGSYSYCDAKQQLDYVLDAYYS 434

Query: 363 KNAGMGATCDFMGVATLTGA 422
                   CDF G ATL  A
Sbjct: 435 AKGD----CDFSGSATLVSA 450



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>VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein 2)|
           (Loop-tail-associated protein) (Loop-tail protein 1)
          Length = 521

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 167 QEHEDQRSRHCSKQRDGAR 111
           ++H D+R RH SK RDG+R
Sbjct: 21  RKHRDRRDRHRSKSRDGSR 39



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>ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase TEL1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2813

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = -2

Query: 226 GFASDLRTQYIASEPANMASKSMRTRGAAIAASSGMELELFSRRRGQSTSSWQAKR 59
           GF  D+  QY+  + A++++ S+     A+  SS      +SR  G+ST S Q++R
Sbjct: 169 GFFLDV-AQYLLPDEADISTLSLARASPALTRSSPAPGSGYSRSGGRSTPSTQSQR 223



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>VANG2_HUMAN (Q9ULK5) Vang-like protein 2 (Van Gogh-like protein 2) (Strabismus|
           1) (Loop-tail protein 1 homolog)
          Length = 521

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 167 QEHEDQRSRHCSKQRDGAR 111
           ++H D+R RH SK RDG R
Sbjct: 21  RKHRDRRDRHRSKSRDGGR 39



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>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated|
           protein 10.8) (High sulfur keratin-associated protein
           10.8) (Keratin-associated protein 18-8)
           (Keratin-associated protein 18.8)
          Length = 259

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +3

Query: 219 ANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGMGATC 389
           ++P   Q +   AC   + C Q      C +PI  V  CS A +   QK++   A C
Sbjct: 142 SSPCCQQSSCQSACCTFSPCQQACCVPICCKPICCVPVCSGASSLCCQKSSCQPACC 198



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>RSMB_VIBCH (Q9KVU5) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 434

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
 Frame = +2

Query: 2   LHTTTPLHSLPRHADXXXXXXXXXATSALTSAAREELELHPAACCNGGSSGPHALAR--- 172
           L T   +H LP  A+         A  ALT  A +  EL    C   G    H L R   
Sbjct: 216 LETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAPQAGELILDCCAAPGGKTAHILERTPE 275

Query: 173 -HVRRLRCDVLRAQVGRE 223
             V  + CD  R +  RE
Sbjct: 276 SQVVAIDCDETRLKRVRE 293



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>MBD1_HUMAN (Q9UIS9) Methyl-CpG-binding domain protein 1 (Methyl-CpG-binding|
           protein MBD1) (Protein containing methyl-CpG-binding
           domain 1)
          Length = 605

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +1

Query: 16  PTPLSPTPRRLAPSPSLLASY*CSD 90
           P P  P PR LAPSP     Y C D
Sbjct: 298 PEPTEPHPRALAPSPPAEFIYYCVD 322


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,263,962
Number of Sequences: 219361
Number of extensions: 857914
Number of successful extensions: 3458
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3452
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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