ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast42g12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 898 bits (453), Expect = 0.0 Identities = 455/456 (99%) Strand = Plus / Plus Query: 1 aagtaacagaggaggaggaagagaggccggcgaaatgaaggctaccgcgggggccctcct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 aagtaacagaggaggaggaagagaggccggcgaaatgaaggctaccgcgggggccctcct 105 Query: 61 cgccgtggtggccacggtgctactgcgaggcatcgcggcagcgccgccccggaagccggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 cgccgtggtggccacggtgctactgcgaggcatcgcggcagcgccgccccggaagccggt 165 Query: 121 ggacgtgccattcgagaagaactacgtcccgacatgggcggaggaccacatccactacgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 ggacgtgccattcgagaagaactacgtcccgacatgggcggaggaccacatccactacgt 225 Query: 181 gaacggcggacgggaggtgcagctgtccctcgacaagaccaccggcactggcttccagac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 gaacggcggacgggaggtgcagctgtccctcgacaagaccaccggcactggcttccagac 285 Query: 241 ccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 ccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactc 345 Query: 301 cgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 cgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcga 405 Query: 361 cttcgagttcttggggaacaggacggngcagccgtacatcctgcagacgaacgtgttctc 420 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 406 cttcgagttcttggggaacaggacggggcagccgtacatcctgcagacgaacgtgttctc 465 Query: 421 cggcgggaagggcgaccgggaacagaggatctacct 456 |||||||||||||||||||||||||||||||||||| Sbjct: 466 cggcgggaagggcgaccgggaacagaggatctacct 501
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 662 bits (334), Expect = 0.0 Identities = 426/456 (93%), Gaps = 7/456 (1%) Strand = Plus / Plus Query: 5 aacagaggaggaggaagagaggccggc----gaaatgaaggctaccgcgggggccctcct 60 ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 10 aacagagaaggaggaagagaggccggccggcgaaatgaaggcgaccgcgggggccctcct 69 Query: 61 cgccgtggtggccacggtgctactgcgaggcatcgcggcagcgccgccccggaagccggt 120 |||||||||||| ||||||| || || ||| | ||||||||||| |||||||||||| Sbjct: 70 cgccgtggtggcggcggtgctgctacgcggcgtggcggcagcgcc---ccggaagccggt 126 Query: 121 ggacgtgccattcgagaagaactacgtcccgacatgggcggaggaccacatccactacgt 180 ||||||||| ||||| ||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 127 ggacgtgccgttcgacaagaactacgtgccgacgtgggcgcaggaccacatccactacgt 186 Query: 181 gaacggcggacgggaggtgcagctgtccctcgacaagaccaccggcactggcttccagac 240 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 187 gaacggcgggcgggaggtgcagctgtccctggacaagaccaccggcacgggcttccagac 246 Query: 241 ccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactc 306 Query: 301 cgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcga 360 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 307 cgccggcaccgtcaccgccttctacctgtcgtcacagaactcggagcacgacgagatcga 366 Query: 361 cttcgagttcttggggaacaggacggngcagccgtacatcctgcagacgaacgtgttctc 420 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 367 cttcgagttcttggggaacaggacggggcagccgtacatcctgcagaccaacgtgttctc 426 Query: 421 cggcgggaagggcgaccgggaacagaggatctacct 456 |||||| |||||||||||||| |||||||||||||| Sbjct: 427 cggcggcaagggcgaccgggagcagaggatctacct 462
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 541 bits (273), Expect = e-151 Identities = 332/352 (94%) Strand = Plus / Plus Query: 105 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 164 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 101 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 160 Query: 165 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 224 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 161 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 220 Query: 225 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 284 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 280 Query: 285 tcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcagaactcgg 344 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 281 tcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcagaactcgg 340 Query: 345 agcacgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgc 404 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 341 agcacgacgagatcgacttcgagttcctggggaacaggacgggggagccgtacatcctgc 400 Query: 405 agacgaacgtgttctccggcgggaagggcgaccgggaacagaggatctacct 456 |||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 401 agacgaacgtcttctccggcgggaagggggaccgggagcagaggatctacct 452
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 541 bits (273), Expect = e-151 Identities = 332/352 (94%) Strand = Plus / Plus Query: 105 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 164 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 98 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 157 Query: 165 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 224 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 158 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 217 Query: 225 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 284 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 277 Query: 285 tcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcagaactcgg 344 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 278 tcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcagaactcgg 337 Query: 345 agcacgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgc 404 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 338 agcacgacgagatcgacttcgagttcctggggaacaggacgggggagccgtacatcctgc 397 Query: 405 agacgaacgtgttctccggcgggaagggcgaccgggaacagaggatctacct 456 |||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 398 agacgaacgtcttctccggcgggaagggggaccgggagcagaggatctacct 449
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 448 bits (226), Expect = e-123 Identities = 327/361 (90%) Strand = Plus / Plus Query: 96 cggcagcgccgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacat 155 |||| ||| |||| |||||||| ||||||||||| ||| ||||||||||||| ||||| | Sbjct: 112 cggcggcggcgcctcggaagcccgtggacgtgccgttccagaagaactacgtgccgacgt 171 Query: 156 gggcggaggaccacatccactacgtgaacggcggacgggaggtgcagctgtccctcgaca 215 ||||| ||||||||||||||||| | ||||||| |||||||||||||||| ||| |||| Sbjct: 172 gggcgcaggaccacatccactacatcgacggcgggcgggaggtgcagctgtacctggaca 231 Query: 216 agaccaccggcactggcttccagacccggggctcctacctcttcggccacttcagcatgc 275 || |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 232 agtccaccggcacgggcttccagacgcggggctcctacctcttcggccacttcagcatgc 291 Query: 276 acatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgc 335 |||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 292 acatgaagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctgtcgtcgc 351 Query: 336 agaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggngcagccgt 395 ||||||||||||||||||||||||||| ||||||| |||| ||| |||||| |||||| | Sbjct: 352 agaactcggagcacgacgagatcgactccgagttcctgggcaaccggacggggcagccct 411 Query: 396 acatcctgcagacgaacgtgttctccggcgggaagggcgaccgggaacagaggatctacc 455 ||||||||||||| ||||||||| ||||||| ||||||||||| || ||| ||||||||| Sbjct: 412 acatcctgcagaccaacgtgttcaccggcggcaagggcgaccgcgagcagcggatctacc 471 Query: 456 t 456 | Sbjct: 472 t 472
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 327 bits (165), Expect = 2e-86 Identities = 207/221 (93%) Strand = Plus / Plus Query: 105 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 164 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 113137 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 113196 Query: 165 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 224 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 113197 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 113256 Query: 225 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 284 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113257 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 113316 Query: 285 tcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 113317 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 113357 Score = 214 bits (108), Expect = 2e-52 Identities = 125/131 (95%) Strand = Plus / Plus Query: 326 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacg 385 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 113453 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcctggggaacaggacg 113512 Query: 386 gngcagccgtacatcctgcagacgaacgtgttctccggcgggaagggcgaccgggaacag 445 | | ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 113513 ggggagccgtacatcctgcagacgaacgtcttctccggcgggaagggggaccgggagcag 113572 Query: 446 aggatctacct 456 ||||||||||| Sbjct: 113573 aggatctacct 113583
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 327 bits (165), Expect = 2e-86 Identities = 207/221 (93%) Strand = Plus / Plus Query: 105 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 164 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 12756 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 12815 Query: 165 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 224 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 12816 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 12875 Query: 225 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 284 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12876 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 12935 Query: 285 tcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 12936 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 12976 Score = 214 bits (108), Expect = 2e-52 Identities = 125/131 (95%) Strand = Plus / Plus Query: 326 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacg 385 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 13072 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcctggggaacaggacg 13131 Query: 386 gngcagccgtacatcctgcagacgaacgtgttctccggcgggaagggcgaccgggaacag 445 | | ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 13132 ggggagccgtacatcctgcagacgaacgtcttctccggcgggaagggggaccgggagcag 13191 Query: 446 aggatctacct 456 ||||||||||| Sbjct: 13192 aggatctacct 13202
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 327 bits (165), Expect = 2e-86 Identities = 207/221 (93%) Strand = Plus / Plus Query: 105 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 164 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 19009939 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 19009998 Query: 165 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 224 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 19009999 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 19010058 Query: 225 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 284 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19010059 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 19010118 Query: 285 tcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 19010119 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 19010159 Score = 214 bits (108), Expect = 2e-52 Identities = 125/131 (95%) Strand = Plus / Plus Query: 326 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacg 385 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 19010255 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcctggggaacaggacg 19010314 Query: 386 gngcagccgtacatcctgcagacgaacgtgttctccggcgggaagggcgaccgggaacag 445 | | ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 19010315 ggggagccgtacatcctgcagacgaacgtcttctccggcgggaagggggaccgggagcag 19010374 Query: 446 aggatctacct 456 ||||||||||| Sbjct: 19010375 aggatctacct 19010385
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 327 bits (165), Expect = 2e-86 Identities = 207/221 (93%) Strand = Plus / Plus Query: 105 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 164 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 19168588 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 19168647 Query: 165 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 224 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 19168648 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 19168707 Query: 225 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 284 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19168708 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 19168767 Query: 285 tcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 19168768 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 19168808 Score = 214 bits (108), Expect = 2e-52 Identities = 125/131 (95%) Strand = Plus / Plus Query: 326 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacg 385 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 19168904 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcctggggaacaggacg 19168963 Query: 386 gngcagccgtacatcctgcagacgaacgtgttctccggcgggaagggcgaccgggaacag 445 | | ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 19168964 ggggagccgtacatcctgcagacgaacgtcttctccggcgggaagggggaccgggagcag 19169023 Query: 446 aggatctacct 456 ||||||||||| Sbjct: 19169024 aggatctacct 19169034
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 163 bits (82), Expect = 6e-37 Identities = 180/213 (84%) Strand = Plus / Plus Query: 244 gggctcctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgc 303 ||||||||||||||||||||||||||| ||||| || ||||| || || |||||||| Sbjct: 343 gggctcctacctcttcggccacttcagtatgcagatgaagctggtgccaggggactccgc 402 Query: 304 cggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgactt 363 || || |||||||| ||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 403 agggaccgtcaccgcattctatctgtcttcccagaactctgagcacgacgagatcgactt 462 Query: 364 cgagttcttggggaacaggacggngcagccgtacatcctgcagacgaacgtgttctccgg 423 ||||||| | || ||| || | | |||||| ||||||| |||||||| |||||| |||| Sbjct: 463 cgagttccttggcaaccggtcagggcagccccacatcctccagacgaatgtgttcaccgg 522 Query: 424 cgggaagggcgaccgggaacagaggatctacct 456 ||| ||||||||||| || ||| |||||||||| Sbjct: 523 cggcaagggcgaccgtgagcagcggatctacct 555
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 121 bits (61), Expect = 2e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 330 |||||| |||||||||||| |||| ||||||||||||| ||| || ||||||||||||| Sbjct: 310 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacctgtc 369 Query: 331 gtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 379 ||||||| ||| |||||||||||||||||||||||||| |||||||| Sbjct: 370 gtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaac 418
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 209 ctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccacttc 268 |||||||||||| ||||| | ||||||||| || | || |||||||||||| | || Sbjct: 254 ctcgacaagacctccggctccggcttccagtccaagagcgagtacctcttcggcaagatc 313 Query: 269 agcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 328 |||||| |||||||||||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 314 gacatgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacctg 373 Query: 329 tcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggg 375 ||||||||| ||| ||||||||||||||||||||||||| |||| Sbjct: 374 tcgtcgcaggggacggcgcacgacgagatcgacttcgagttcctggg 420
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 113 bits (57), Expect = 5e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 330 |||||| |||||||||||| |||| ||||||||||||| |||||| ||||||||||||| Sbjct: 210 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtc 269 Query: 331 gtcgcagaactcggagcacgacgagatcgacttcgagttcttggg 375 ||||||| ||| ||||||||||||||||||||||||| |||| Sbjct: 270 gtcgcaggggacggcgcacgacgagatcgacttcgagttcctggg 314
>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA, complete cds Length = 1130 Score = 103 bits (52), Expect = 5e-19 Identities = 99/115 (86%) Strand = Plus / Plus Query: 338 aactcggagcacgacgagatcgacttcgagttcttggggaacaggacggngcagccgtac 397 ||||| |||||||| ||||||||||||||||||||||||||||| || | |||||| ||| Sbjct: 345 aactcagagcacgatgagatcgacttcgagttcttggggaacagaacagggcagccctac 404 Query: 398 atcctgcagacgaacgtgttctccggcgggaagggcgaccgggaacagaggatct 452 || ||||||| || || ||| |||| || ||||| ||||| ||||||||||||| Sbjct: 405 attttgcagactaatgtcttcaccggaggaaagggtgaccgagaacagaggatct 459
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 330 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| |||| Sbjct: 312 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtc 371 Query: 331 gtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 379 ||||||| ||| ||||| |||||||||||||||||| |||||||| Sbjct: 372 gtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaac 420
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 330 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| |||| Sbjct: 312 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtc 371 Query: 331 gtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 379 ||||||| ||| ||||| |||||||||||||||||| |||||||| Sbjct: 372 gtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaac 420
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 97.6 bits (49), Expect = 3e-17 Identities = 109/129 (84%) Strand = Plus / Plus Query: 251 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 310 ||||||| ||||| |||| |||||| ||||||||||| || |||||||||||||| Sbjct: 303 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 362 Query: 311 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 370 ||| || ||||||| || ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 363 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttc 422 Query: 371 ttggggaac 379 |||||||| Sbjct: 423 ctggggaac 431
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 97.6 bits (49), Expect = 3e-17 Identities = 109/129 (84%) Strand = Plus / Plus Query: 251 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 310 ||||||| ||||| |||| |||||| ||||||||||| || |||||||||||||| Sbjct: 310 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 369 Query: 311 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 370 ||| || ||||||| || ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 370 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttc 429 Query: 371 ttggggaac 379 |||||||| Sbjct: 430 ctggggaac 438
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 89.7 bits (45), Expect = 7e-15 Identities = 93/109 (85%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 330 |||||| |||||| ||||| |||| ||||||||||||| |||||| |||||||| |||| Sbjct: 204 catgcagatcaagttcgtccccggcaactccgccggcaccgtcaccaccttctacttgtc 263 Query: 331 gtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 379 ||||||| ||| ||||| |||||||||||||||||| |||||||| Sbjct: 264 gtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaac 312
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 297 actccgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgaga 356 ||||||||||||| |||||||||| |||||||||||||||| | | ||||||||||| Sbjct: 385 actccgccggcaccgtcaccgcctactacctgtcgtcgcagggcggcgcgcacgacgaga 444 Query: 357 tcgacttcgagttcttggg 375 |||||||||||||| |||| Sbjct: 445 tcgacttcgagttcctggg 463
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 279 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 338 ||||||||||| |||| |||| |||||||| || ||||||| |||||||||||||||| Sbjct: 263 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg 322 Query: 339 actcggagcacgacgagatcgacttcgagttcttggg 375 || ||||||||||||||||||||||||| |||| Sbjct: 323 gtccgacgcacgacgagatcgacttcgagttcctggg 359
>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA, complete cds Length = 1268 Score = 81.8 bits (41), Expect = 2e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgcag 406 |||||||||||||| ||||||||||||||||||||||| | ||||| ||||| |||||| Sbjct: 370 cacgacgagatcgatttcgagttcttggggaacaggacaggacagccatacattctgcag 429 Query: 407 acgaacgtgttc 418 || || |||||| Sbjct: 430 accaatgtgttc 441
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 81.8 bits (41), Expect = 2e-12 Identities = 115/140 (82%) Strand = Plus / Plus Query: 279 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 338 ||||||||||| |||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 337 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactacttgtcgtcgcagg 396 Query: 339 actcggagcacgacgagatcgacttcgagttcttggggaacaggacggngcagccgtaca 398 || ||| || |||||||||||||||||| ||||||| ||| | | ||||||||| Sbjct: 397 ggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccggggagccgtaca 456 Query: 399 tcctgcagacgaacgtgttc 418 ||||| || ||||||||| Sbjct: 457 cgctgcacaccaacgtgttc 476
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 81.8 bits (41), Expect = 2e-12 Identities = 115/140 (82%) Strand = Plus / Plus Query: 279 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 338 ||||||||||| |||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 327 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactacttgtcgtcgcagg 386 Query: 339 actcggagcacgacgagatcgacttcgagttcttggggaacaggacggngcagccgtaca 398 || ||| || |||||||||||||||||| ||||||| ||| | | ||||||||| Sbjct: 387 ggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccggggagccgtaca 446 Query: 399 tcctgcagacgaacgtgttc 418 ||||| || ||||||||| Sbjct: 447 cgctgcacaccaacgtgttc 466
>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase, partial cds Length = 1292 Score = 81.8 bits (41), Expect = 2e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgcag 406 |||||||||||||| ||||||||||||||||||||||| | ||||| ||||| |||||| Sbjct: 436 cacgacgagatcgatttcgagttcttggggaacaggactggacagccatacattctgcag 495 Query: 407 acgaacgtgttc 418 || || |||||| Sbjct: 496 accaatgtgttc 507
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 249 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 308 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 252 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 311 Query: 309 cagtcaccgccttctacct 327 | |||||| |||||||||| Sbjct: 312 ccgtcacctccttctacct 330 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 ||||||||||||||| |||||||| |||| Sbjct: 353 cacgacgagatcgacatcgagttcatggg 381
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 249 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 308 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 257 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 316 Query: 309 cagtcaccgccttctacct 327 | |||||| |||||||||| Sbjct: 317 ccgtcacctccttctacct 335 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 ||||||||||||||| |||||||| |||| Sbjct: 358 cacgacgagatcgacatcgagttcatggg 386
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 249 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 308 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 8321925 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 8321984 Query: 309 cagtcaccgccttctacct 327 | |||||| |||||||||| Sbjct: 8321985 ccgtcacctccttctacct 8322003 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaac 379 ||||||||||| ||| | ||||||||||||||| Sbjct: 8482431 cacgacgagattgaccttgagttcttggggaac 8482463 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 ||||||||||||||| |||||||| |||| Sbjct: 8322026 cacgacgagatcgacatcgagttcatggg 8322054 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ccgcgggggccctcctcgcc 64 |||||||||||||||||||| Sbjct: 20214168 ccgcgggggccctcctcgcc 20214149
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 249 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 308 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 248 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 307 Query: 309 cagtcaccgccttctacct 327 | |||||| |||||||||| Sbjct: 308 ccgtcacctccttctacct 326 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 ||||||||||||||| |||||||| |||| Sbjct: 349 cacgacgagatcgacatcgagttcatggg 377
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 249 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 308 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 62034 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 62093 Query: 309 cagtcaccgccttctacct 327 | |||||| |||||||||| Sbjct: 62094 ccgtcacctccttctacct 62112 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 ||||||||||||||| |||||||| |||| Sbjct: 62135 cacgacgagatcgacatcgagttcatggg 62163
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 249 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 308 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 257 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 316 Query: 309 cagtcaccgccttctacct 327 | |||||| |||||||||| Sbjct: 317 ccgtcacctccttctacct 335 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 ||||||||||||||| |||||||| |||| Sbjct: 358 cacgacgagatcgacatcgagttcatggg 386
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 249 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 308 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 252 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 311 Query: 309 cagtcaccgccttctacct 327 | |||||| |||||||||| Sbjct: 312 ccgtcacctccttctacct 330 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 ||||||||||||||| |||||||| |||| Sbjct: 353 cacgacgagatcgacatcgagttcatggg 381
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 281 aagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 328 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 281 aagctcgtcgacggcaactccgccggcacagtcacctccttctacctg 328 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 ||||||||||||||| |||||||| |||| Sbjct: 350 cacgacgagatcgacatcgagttcatggg 378
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 251 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 310 |||||||||||| | |||||| || | || ||||||||||||||| ||||||| || || Sbjct: 154 tacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgctgggact 213 Query: 311 gtcaccgccttctacctgtcgtc 333 |||||| ||||||||||| |||| Sbjct: 214 gtcacctccttctacctgacgtc 236
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 251 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 310 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 266 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 325 Query: 311 gtcaccgccttctacctgtcgtc 333 |||||| ||||||||||| |||| Sbjct: 326 gtcacctccttctacctgacgtc 348
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 251 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 310 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 254 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 313 Query: 311 gtcaccgccttctacctgtcgtc 333 |||||| ||||||||||| |||| Sbjct: 314 gtcacctccttctacctgacgtc 336
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 251 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 310 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 311 gtcaccgccttctacctgtcgtc 333 |||||| ||||||||||| |||| Sbjct: 315 gtcacctccttctacctgacgtc 337 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 346 gcacgacgagatcgacttcgagttcttggg 375 |||||||||||||||| |||||||| |||| Sbjct: 353 gcacgacgagatcgacatcgagttcatggg 382
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 251 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 310 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 311 gtcaccgccttctacctgtcgtc 333 |||||| ||||||||||| |||| Sbjct: 315 gtcacctccttctacctgacgtc 337 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 346 gcacgacgagatcgacttcgagttcttggg 375 |||||||||||||||| |||||||| |||| Sbjct: 353 gcacgacgagatcgacatcgagttcatggg 382
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 251 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 310 |||||||||||| | |||||| || | || ||||||||||||||| ||||||| || || Sbjct: 327 tacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgctgggact 386 Query: 311 gtcaccgccttctacctgtcgtc 333 |||||| ||||||||||| |||| Sbjct: 387 gtcacctccttctacctgacgtc 409
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 326 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 379 |||||||||||| ||| |||||||||||||||||||||||||| |||||||| Sbjct: 28761689 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaac 28761742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 28749764 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 28749818 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 279 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 ||||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 28773895 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 28773849 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||| |||||||||||| |||| ||||||||||||| ||| || |||||||| Sbjct: 28761544 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 28761598 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaac 379 ||||| |||||||||||||||||| |||||||| Sbjct: 28749974 cacgatgagatcgacttcgagttcctggggaac 28750006 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 |||||||||||||||||||||||| |||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctggg 13230430 Score = 46.1 bits (23), Expect = 0.100 Identities = 55/66 (83%) Strand = Plus / Minus Query: 353 gagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgcagacgaac 412 |||||||||||||||||| ||||||| ||| | | ||||||||| ||||| || ||| Sbjct: 28773746 gagatcgacttcgagttcctggggaatgtgaccggggagccgtacacgctgcacaccaac 28773687 Query: 413 gtgttc 418 |||||| Sbjct: 28773686 gtgttc 28773681 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 cgtcggcggcgactccgccg 305 |||||||||||||||||||| Sbjct: 11429792 cgtcggcggcgactccgccg 11429811
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 326 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 379 |||||||||||| ||| |||||||||||||||||||||||||| |||||||| Sbjct: 69464 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaac 69517 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 57539 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 57593 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 279 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 ||||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 81670 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 81624 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||| |||||||||||| |||| ||||||||||||| ||| || |||||||| Sbjct: 69319 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 69373 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaac 379 ||||| |||||||||||||||||| |||||||| Sbjct: 57749 cacgatgagatcgacttcgagttcctggggaac 57781 Score = 46.1 bits (23), Expect = 0.100 Identities = 55/66 (83%) Strand = Plus / Minus Query: 353 gagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgcagacgaac 412 |||||||||||||||||| ||||||| ||| | | ||||||||| ||||| || ||| Sbjct: 81521 gagatcgacttcgagttcctggggaatgtgaccggggagccgtacacgctgcacaccaac 81462 Query: 413 gtgttc 418 |||||| Sbjct: 81461 gtgttc 81456
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 326 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 379 |||||||||||| ||| |||||||||||||||||||||||||| |||||||| Sbjct: 162255 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaac 162308 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 150330 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 150384 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||| |||||||||||| |||| ||||||||||||| ||| || |||||||| Sbjct: 162110 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 162164 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaac 379 ||||| |||||||||||||||||| |||||||| Sbjct: 150540 cacgatgagatcgacttcgagttcctggggaac 150572
>gb|AF052194.1|AF052194 Actinidia deliciosa xyloglucan endotransglycosylase precursor (XET) mRNA, partial cds Length = 789 Score = 65.9 bits (33), Expect = 1e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 338 aactcggagcacgacgagatcgacttcgagttcttggggaacaggacggngcagccgtac 397 ||||| ||||| || ||||| ||||| |||||||||||||||||||| | |||||| ||| Sbjct: 280 aactcagagcatgatgagatagactttgagttcttggggaacaggacagggcagccatac 339 Query: 398 atcctgcagacgaacgtgtt 417 || ||||||| || ||||| Sbjct: 340 atattgcagacaaatgtgtt 359
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 281 aagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 328 |||||||||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 272 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 319 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 ||||||||||||||| |||||||| |||| Sbjct: 341 cacgacgagatcgacatcgagttcatggg 369
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 297 actccgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgaga 356 |||| |||||||| |||||| |||||||||| ||||| ||| | | | |||||||||| Sbjct: 399 actcagccggcaccgtcaccaccttctacctctcgtcccagggccccaaccacgacgaga 458 Query: 357 tcgacttcgagttcttggggaaca 380 |||||||||||||| | ||||||| Sbjct: 459 tcgacttcgagttcctagggaaca 482
>gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan endotransglycosylase precursor (XET) mRNA, complete cds Length = 1178 Score = 63.9 bits (32), Expect = 4e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 320 ttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 379 ||||| ||||| || || ||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 314 ttctatctgtcttcacaaaactcagagcatgatgagatagactttgagttcttggggaac 373 Query: 380 aggacggngcagccgtacatcctgcagacgaacgtgttc 418 || || | |||||| ||||| ||||||| || |||||| Sbjct: 374 agaacagggcagccatacatattgcagacaaatgtgttc 412
>ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT5G13870 (EXGT-A4) mRNA, complete cds Length = 1386 Score = 61.9 bits (31), Expect = 2e-06 Identities = 165/210 (78%) Strand = Plus / Plus Query: 208 cctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccactt 267 |||||||||| ||| ||||||||||| ||| || || |||||| | || |||||||| Sbjct: 568 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 627 Query: 268 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 327 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 628 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 687 Query: 328 gtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggn 387 |||||| |||||||| || || || ||||| ||||| ||||| | |||||||| || | Sbjct: 688 gtcgtcccagaactcagaacatgatgagatagactttgagtttctagggaacagaactgg 747 Query: 388 gcagccgtacatcctgcagacgaacgtgtt 417 ||||| ||||| ||||||| |||||||| Sbjct: 748 ccagccttacattttgcagactaacgtgtt 777
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 253 cctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagt 312 |||||||||| | ||||||||| | || ||||||||| |||||| || ||||||| || Sbjct: 243 cctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggt 302 Query: 313 caccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttctt 372 | || ||||||||||| | ||| || | ||||||||||||||||||||||||| | Sbjct: 303 cgccaccttctacctgacatcggagggagatgcgcacgacgagatcgacttcgagttcct 362 Query: 373 ggggaac 379 ||||||| Sbjct: 363 ggggaac 369
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 251 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 310 |||||||||||| | |||||| | | || |||||||||| |||| ||||||||||||| Sbjct: 259 tacctcttcggcgagttcagcgtccggatgaagctcgtcgacggcaactccgccggcacc 318 Query: 311 gtcaccgccttctacctgtcgtc 333 |||||| ||||||| ||| |||| Sbjct: 319 gtcacctccttctatctgacgtc 341
>gb|AY189971.1| Gossypium hirsutum xyloglucan endotransglycosylase mRNA, complete cds Length = 1369 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 267 tcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgcctt 321 |||||||| | ||||||||| || ||||||||||||||| |||||||||||||| Sbjct: 1251 tcagcatgaaaatcaagctcatccccggcgactccgccggaacagtcaccgcctt 1305 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 267 tcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgcctt 321 |||||||| | ||||||||| || ||||||||||||||| |||||||||||||| Sbjct: 311 tcagcatgaaaatcaagctcatccccggcgactccgccggaacagtcaccgcctt 365
>dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan transferase, complete cds, clone: RAFL23-11-K19 Length = 1028 Score = 61.9 bits (31), Expect = 2e-06 Identities = 165/210 (78%) Strand = Plus / Plus Query: 208 cctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccactt 267 |||||||||| ||| ||||||||||| ||| || || |||||| | || |||||||| Sbjct: 191 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 250 Query: 268 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 327 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 251 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 310 Query: 328 gtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggn 387 |||||| |||||||| || || || ||||| ||||| ||||| | |||||||| || | Sbjct: 311 gtcgtcccagaactcagaacatgatgagatagactttgagtttctagggaacagaactgg 370 Query: 388 gcagccgtacatcctgcagacgaacgtgtt 417 ||||| ||||| ||||||| |||||||| Sbjct: 371 ccagccttacattttgcagactaacgtgtt 400
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 253 cctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagt 312 |||||||||| | ||||||||| | || ||||||||| |||||| || ||||||| || Sbjct: 311 cctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggt 370 Query: 313 caccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttctt 372 | || ||||||||||| | ||| || | ||||||||||||||||||||||||| | Sbjct: 371 cgccaccttctacctgacatcggagggagatgcgcacgacgagatcgacttcgagttcct 430 Query: 373 ggggaac 379 ||||||| Sbjct: 431 ggggaac 437
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 305 ggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttc 364 ||||| |||||| |||||||||||||||| ||| | | ||||||||||||||||||| Sbjct: 375 ggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgacttc 434 Query: 365 gagttcttggg 375 |||||| |||| Sbjct: 435 gagttcctggg 445
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 345 agcacgacgagatcgacttcgagttcttggggaac 379 |||||||||||||||||||||||||| |||||||| Sbjct: 412 agcacgacgagatcgacttcgagttcctggggaac 446 Score = 44.1 bits (22), Expect = 0.39 Identities = 61/74 (82%) Strand = Plus / Plus Query: 251 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 310 ||||||| ||||| |||| |||||| ||||||||||| || |||||||||||||| Sbjct: 193 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 252 Query: 311 gtcaccgccttcta 324 ||| || ||||||| Sbjct: 253 gtcgccaccttcta 266
>dbj|D88413.1| Cotton mRNA for endo-xyloglucan transferase, clone CF101, partial cds Length = 1062 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 267 tcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgcctt 321 |||||||| | ||||||||| || ||||||||||||||| |||||||||||||| Sbjct: 194 tcagcatgaaaatcaagctcatccccggcgactccgccggaacagtcaccgcctt 248
>dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxyloglucan transferase, complete cds Length = 1050 Score = 61.9 bits (31), Expect = 2e-06 Identities = 165/210 (78%) Strand = Plus / Plus Query: 208 cctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccactt 267 |||||||||| ||| ||||||||||| ||| || || |||||| | || |||||||| Sbjct: 211 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 270 Query: 268 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 327 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 271 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 330 Query: 328 gtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggn 387 |||||| |||||||| || || || ||||| ||||| ||||| | |||||||| || | Sbjct: 331 gtcgtcccagaactcagaacatgatgagatagactttgagtttctagggaacagaactgg 390 Query: 388 gcagccgtacatcctgcagacgaacgtgtt 417 ||||| ||||| ||||||| |||||||| Sbjct: 391 ccagccttacattttgcagactaacgtgtt 420
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 316 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 234 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 279
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 346 gcacgacgagatcgacttcgagttcttggggaac 379 ||||||||||||||||||||||||| |||||||| Sbjct: 32714 gcacgacgagatcgacttcgagttcctggggaac 32681
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 316 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 141990 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 141945 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 273 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 150577 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 150525
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 346 gcacgacgagatcgacttcgagttcttggggaac 379 ||||||||||||||||||||||||| |||||||| Sbjct: 30557006 gcacgacgagatcgacttcgagttcctggggaac 30556973 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 316 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 30508613 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 30508568 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 273 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 30517200 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 30517148
>gb|AF515607.1| Populus tremula x Populus tremuloides xyloglucan endotransglycosylase precursor (XET16A) mRNA, complete cds Length = 1267 Score = 60.0 bits (30), Expect = 7e-06 Identities = 83/101 (82%) Strand = Plus / Plus Query: 308 acagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgag 367 |||||||| || ||||| || || || || ||||||||||| |||||||| ||||| ||| Sbjct: 336 acagtcactgctttctatctatcctcacaaaactcggagcatgacgagatagactttgag 395 Query: 368 ttcttggggaacaggacggngcagccgtacatcctgcagac 408 ||||| || |||||||| | ||||| ||||| ||||||| Sbjct: 396 ttcttaggaaacaggactggccagccctacattttgcagac 436
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 316 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 317 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 272
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 271 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 316 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 297 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 342
>gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hydrolase precursor (XTH1) mRNA, complete cds Length = 1112 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 342 cggagcacgacgagatcgacttcgagttcttggggaacag 381 |||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 290 cggagcacgatgagatagactttgagttcttggggaacag 329
>emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZF02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 56.0 bits (28), Expect = 1e-04 Identities = 130/164 (79%) Strand = Plus / Plus Query: 208 cctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccactt 267 |||||||||| ||| ||||||||||| ||| || || |||||| | || |||||||| Sbjct: 557 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 616 Query: 268 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 327 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 617 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 676 Query: 328 gtcgtcgcagaactcggagcacgacgagatcgacttcgagttct 371 |||||| |||||||| || || || ||||| ||||| ||||||| Sbjct: 677 gtcgtcccagaactcagaacatgatgagatagactttgagttct 720
>dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1712 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 342 cggagcacgacgagatcgacttcgagttcttggggaacag 381 |||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 842 cggagcacgatgagatagactttgagttcttggggaacag 881
>gb|AY476737.1| Gossypium hirsutum XET mRNA, partial sequence Length = 765 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 353 gagatcgacttcgagttcttggggaac 379 ||||||||||||||||||||||||||| Sbjct: 1 gagatcgacttcgagttcttggggaac 27
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 345 agcacgacgagatcgacttcgagttcttggg 375 |||||||||||||||||||||||||| |||| Sbjct: 10359112 agcacgacgagatcgacttcgagttcctggg 10359142 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 282 agctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 10358948 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttctt 372 ||||||||||||||||| |||||||| Sbjct: 10363968 cacgacgagatcgactttgagttctt 10363993
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 345 agcacgacgagatcgacttcgagttcttggg 375 |||||||||||||||||||||||||| |||| Sbjct: 1534 agcacgacgagatcgacttcgagttcctggg 1564 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 282 agctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 1370 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttctt 372 ||||||||||||||||| |||||||| Sbjct: 6390 cacgacgagatcgactttgagttctt 6415
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 345 agcacgacgagatcgacttcgagttcttggg 375 |||||||||||||||||||||||||| |||| Sbjct: 124922 agcacgacgagatcgacttcgagttcctggg 124952 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 282 agctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 124758
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 299 tccgccggcacagtcaccgccttctacctgtcgt 332 ||||||||||| |||||||||| ||||||||||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctgtcgt 396 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 346 gcacgacgagatcgacttcgagttcttggg 375 ||||||| ||||||||||||||||| |||| Sbjct: 411 gcacgacaagatcgacttcgagttcctggg 440
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaaca 380 |||||||||||||||||||||||| |||| |||| Sbjct: 74 cacgacgagatcgacttcgagttcctgggcaaca 107
>emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1347 Score = 52.0 bits (26), Expect = 0.002 Identities = 128/162 (79%) Strand = Plus / Plus Query: 208 cctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccactt 267 |||||||||| ||| ||||||||||| ||| || || |||||| | || |||||||| Sbjct: 568 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 627 Query: 268 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 327 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 628 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 687 Query: 328 gtcgtcgcagaactcggagcacgacgagatcgacttcgagtt 369 |||||| |||||||| || || || ||||| ||||| ||||| Sbjct: 688 gtcgtcccagaactcagaacatgatgagatagactttgagtt 729
>ref|XM_470453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 346 gcacgacgagatcgacttcgagttcttggggaacagg 382 |||||||||| | ||||||||||||||||| |||||| Sbjct: 459 gcacgacgagctggacttcgagttcttgggcaacagg 495
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 50.1 bits (25), Expect = 0.006 Identities = 57/68 (83%) Strand = Plus / Plus Query: 349 cgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgcagac 408 ||||||| | |||||||||||| |||||||| |||||| |||| |||||| | ||||| Sbjct: 345 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 404 Query: 409 gaacgtgt 416 ||||||| Sbjct: 405 caacgtgt 412 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 266 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 253 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 312
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 50.1 bits (25), Expect = 0.006 Identities = 57/68 (83%) Strand = Plus / Plus Query: 349 cgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgcagac 408 ||||||| | |||||||||||| |||||||| |||||| |||| |||||| | ||||| Sbjct: 437 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 496 Query: 409 gaacgtgt 416 ||||||| Sbjct: 497 caacgtgt 504 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 266 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 345 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 404
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 346 gcacgacgagatcgacttcgagttcttggggaacagg 382 |||||||||| | ||||||||||||||||| |||||| Sbjct: 89251 gcacgacgagctggacttcgagttcttgggcaacagg 89215
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 346 gcacgacgagatcgacttcgagttcttggggaacagg 382 |||||||||| | ||||||||||||||||| |||||| Sbjct: 35691473 gcacgacgagctggacttcgagttcttgggcaacagg 35691437 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 346 gcacgacgagatcgacttcgagttcttggggaac 379 |||||||||| | |||||||||||| |||||||| Sbjct: 7311667 gcacgacgagctggacttcgagttcctggggaac 7311634 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 gacgagatcgacttcgagttc 370 ||||||||||||||||||||| Sbjct: 944218 gacgagatcgacttcgagttc 944238 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aacagaggaggaggaagaga 24 |||||||||||||||||||| Sbjct: 33448951 aacagaggaggaggaagaga 33448932
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaac 379 ||||||||||| |||||||||||| |||||||| Sbjct: 51 cacgacgagattgacttcgagttcctggggaac 83
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.006 Identities = 57/68 (83%) Strand = Plus / Plus Query: 349 cgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgcagac 408 ||||||| | |||||||||||| |||||||| |||||| |||| |||||| | ||||| Sbjct: 20676460 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 20676519 Query: 409 gaacgtgt 416 ||||||| Sbjct: 20676520 caacgtgt 20676527 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 266 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 20676277 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 20676336
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 346 gcacgacgagatcgacttcgagttcttggggaacagg 382 |||||||||| | ||||||||||||||||| |||||| Sbjct: 35781546 gcacgacgagctggacttcgagttcttgggcaacagg 35781510 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 346 gcacgacgagatcgacttcgagttcttggggaac 379 |||||||||| | |||||||||||| |||||||| Sbjct: 7309562 gcacgacgagctggacttcgagttcctggggaac 7309529 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 gacgagatcgacttcgagttc 370 ||||||||||||||||||||| Sbjct: 944216 gacgagatcgacttcgagttc 944236 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aacagaggaggaggaagaga 24 |||||||||||||||||||| Sbjct: 33539461 aacagaggaggaggaagaga 33539442
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 |||||||||||||||||||||||| |||| Sbjct: 147590 cacgacgagatcgacttcgagttcctggg 147618
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 50.1 bits (25), Expect = 0.006 Identities = 57/68 (83%) Strand = Plus / Plus Query: 349 cgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgcagac 408 ||||||| | |||||||||||| |||||||| |||||| |||| |||||| | ||||| Sbjct: 29210 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 29269 Query: 409 gaacgtgt 416 ||||||| Sbjct: 29270 caacgtgt 29277 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 266 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 29027 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 29086
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 50.1 bits (25), Expect = 0.006 Identities = 57/68 (83%) Strand = Plus / Plus Query: 349 cgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgcagac 408 ||||||| | |||||||||||| |||||||| |||||| |||| |||||| | ||||| Sbjct: 437 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 496 Query: 409 gaacgtgt 416 ||||||| Sbjct: 497 caacgtgt 504 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 266 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 345 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 404
>dbj|AK104577.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A12, full insert sequence Length = 1326 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 346 gcacgacgagatcgacttcgagttcttggggaacagg 382 |||||||||| | ||||||||||||||||| |||||| Sbjct: 410 gcacgacgagctggacttcgagttcttgggcaacagg 446
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 50.1 bits (25), Expect = 0.006 Identities = 57/68 (83%) Strand = Plus / Plus Query: 349 cgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctgcagac 408 ||||||| | |||||||||||| |||||||| |||||| |||| |||||| | ||||| Sbjct: 531 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 590 Query: 409 gaacgtgt 416 ||||||| Sbjct: 591 caacgtgt 598 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 266 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 348 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 407
>dbj|AK071886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047H18, full insert sequence Length = 1359 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 346 gcacgacgagatcgacttcgagttcttggggaacagg 382 |||||||||| | ||||||||||||||||| |||||| Sbjct: 463 gcacgacgagctggacttcgagttcttgggcaacagg 499
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggg 375 |||||||||||||||||||||||| |||| Sbjct: 643 cacgacgagatcgacttcgagttcctggg 671
>dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferase, partial cds Length = 975 Score = 50.1 bits (25), Expect = 0.006 Identities = 64/77 (83%) Strand = Plus / Plus Query: 305 ggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttc 364 ||||||||||| || ||||| | || || || ||| ||||||| || ||||| ||||| Sbjct: 273 ggcacagtcactgctttctatttatcttcccaaaacgcggagcatgatgagatagacttt 332 Query: 365 gagttcttggggaacag 381 ||||||||||||||||| Sbjct: 333 gagttcttggggaacag 349
>gb|AY098522.1| Ananas comosus xyloglucan endotransglycosylase mRNA, partial cds Length = 742 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 311 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 370 |||||| |||||||| |||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 25 gtcaccaccttctacttgtcgtcgcaagggtcgatgcacgacgagatcgatttcgagttc 84
>ref|NM_101028.2| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT1G11545 mRNA, complete cds Length = 1131 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 281 aagctcgtcggcggcgactccgccggc 307 ||||||||||| ||||||||||||||| Sbjct: 336 aagctcgtcggaggcgactccgccggc 362
>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete sequence Length = 168537 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 9 gaggaggaggaagagaggccggc 31 ||||||||||||||||||||||| Sbjct: 122700 gaggaggaggaagagaggccggc 122678
>gb|AC011661.5|AC011661 Genomic sequence for Arabidopsis thaliana BAC T23J18 from chromosome I, complete sequence Length = 84797 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Minus Query: 281 aagctcgtcggcggcgactccgccggc 307 ||||||||||| ||||||||||||||| Sbjct: 64437 aagctcgtcggaggcgactccgccggc 64411
>gb|AY088546.1| Arabidopsis thaliana clone 7729 mRNA, complete sequence Length = 1109 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 281 aagctcgtcggcggcgactccgccggc 307 ||||||||||| ||||||||||||||| Sbjct: 315 aagctcgtcggaggcgactccgccggc 341
>dbj|AB017025.1| Nicotiana tabacum mRNA for endo-xyloglucan transferase (EXGT), complete cds Length = 1211 Score = 46.1 bits (23), Expect = 0.100 Identities = 61/74 (82%) Strand = Plus / Plus Query: 344 gagcacgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctg 403 |||||||| ||||| || || || ||||| ||||||||||| | ||| || ||||| || Sbjct: 361 gagcacgatgagatagattttgaattcttagggaacaggactgggcaaccatacattttg 420 Query: 404 cagacgaacgtgtt 417 |||||||| ||||| Sbjct: 421 cagacgaatgtgtt 434
>emb|AJ295945.1|FPR295945 Festuca pratensis mRNA for Xet3 protein Length = 1205 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 350 gacgagatcgacttcgagttcttggggaac 379 ||||| ||||||||||||||| |||||||| Sbjct: 424 gacgaaatcgacttcgagttcctggggaac 453
>emb|CR711857.2|CNS0GC7X Tetraodon nigroviridis full-length cDNA Length = 892 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 gaggaggaggaagagaggccgg 30 |||||||||||||||||||||| Sbjct: 576 gaggaggaggaagagaggccgg 597
>emb|CR718189.2|CNS0GH3N Tetraodon nigroviridis full-length cDNA Length = 891 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 gaggaggaggaagagaggccgg 30 |||||||||||||||||||||| Sbjct: 576 gaggaggaggaagagaggccgg 597
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 346 gcacgacgagatcgacttcgagttcttggggaac 379 |||||||||| | |||||||||||| |||||||| Sbjct: 62923 gcacgacgagctggacttcgagttcctggggaac 62890
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 aacagaggaggaggaagagagg 26 |||||||||||||||||||||| Sbjct: 23162659 aacagaggaggaggaagagagg 23162680
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 44.1 bits (22), Expect = 0.39 Identities = 61/74 (82%) Strand = Plus / Plus Query: 297 actccgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgaga 356 ||||||||||||| ||||| |||| |||||| || || ||| || ||||||||||| Sbjct: 342 actccgccggcaccgtcacagcctactacctctcctcccagggaacgacgcacgacgaga 401 Query: 357 tcgacttcgagttc 370 ||||||| |||||| Sbjct: 402 tcgactttgagttc 415
>dbj|AK061284.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G03, full insert sequence Length = 1194 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 346 gcacgacgagatcgacttcgagttcttggggaac 379 |||||||||| | |||||||||||| |||||||| Sbjct: 436 gcacgacgagctggacttcgagttcctggggaac 469
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 297 actccgccggcacagtcaccgccttctacctgtcgtcg 334 ||||||| ||||| || ||| ||||||||||||||||| Sbjct: 383 actccgcgggcaccgtgacctccttctacctgtcgtcg 420
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 aacagaggaggaggaagagagg 26 |||||||||||||||||||||| Sbjct: 23090850 aacagaggaggaggaagagagg 23090871
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 aacagaggaggaggaagagagg 26 |||||||||||||||||||||| Sbjct: 15738 aacagaggaggaggaagagagg 15717
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 gacgagatcgacttcgagttc 370 ||||||||||||||||||||| Sbjct: 99415 gacgagatcgacttcgagttc 99435
>ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaac 379 ||||||||||| ||| | ||||||||||||||| Sbjct: 307 cacgacgagattgaccttgagttcttggggaac 339
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 273 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 212 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 264
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gtaacagaggaggaggaagag 23 ||||||||||||||||||||| Sbjct: 71484 gtaacagaggaggaggaagag 71464
>gb|AY497478.1| Lycopersicon esculentum xyloglucan endotransglucosylase-hydrolase XTH7 (XTH7) mRNA, complete cds Length = 993 Score = 42.1 bits (21), Expect = 1.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 359 gacttcgagttcttggggaacaggacggngcagccgtaca 398 |||||||| |||||||| ||| |||| | ||||||||||| Sbjct: 343 gacttcgaattcttgggaaaccggacagggcagccgtaca 382
>gb|AC132391.3| Mus musculus BAC clone RP23-454N21 from chromosome 12, complete sequence Length = 178291 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 acagaggaggaggaagagagg 26 ||||||||||||||||||||| Sbjct: 99335 acagaggaggaggaagagagg 99355
>emb|AJ843248.1| Physcomitrella patens mRNA for xyloglucan endotransglycosylase/hydrolase precursor (xth1 gene) Length = 1045 Score = 42.1 bits (21), Expect = 1.6 Identities = 53/64 (82%) Strand = Plus / Plus Query: 372 tggggaacaggacggngcagccgtacatcctgcagacgaacgtgttctccggcgggaagg 431 |||||||| ||| | |||||||| ||| ||||| || ||||||||| |||||||||| Sbjct: 324 tggggaactcgactgggcagccgttcattctgcacaccaacgtgttcgtgggcgggaagg 383 Query: 432 gcga 435 |||| Sbjct: 384 gcga 387
>gb|AC151992.3| Mus musculus BAC clone RP23-212H13 from chromosome 8, complete sequence Length = 182428 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 acagaggaggaggaagagagg 26 ||||||||||||||||||||| Sbjct: 162052 acagaggaggaggaagagagg 162032
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 tcctcgccgtggtggccacggtgct 81 ||||||||||||||||| ||||||| Sbjct: 75420 tcctcgccgtggtggccgcggtgct 75396
>gb|AE005709.1| Caulobacter crescentus CB15 section 35 of 359 of the complete genome Length = 10538 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 57 tcctcgccgtggtggccacggtgct 81 |||| |||||||||||||||||||| Sbjct: 9397 tcctggccgtggtggccacggtgct 9421
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 273 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 284 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 336
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gtaacagaggaggaggaagag 23 ||||||||||||||||||||| Sbjct: 18673708 gtaacagaggaggaggaagag 18673688
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaac 379 ||||||||||||||||| |||||| | |||||| Sbjct: 535 cacgacgagatcgactttgagttcctcgggaac 567
>gb|AC157949.1| Mus musculus BAC clone RP23-148A16 from chromosome 9, complete sequence Length = 204674 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gaggaggaggaagagaggccg 29 ||||||||||||||||||||| Sbjct: 12874 gaggaggaggaagagaggccg 12894
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaac 379 ||||||||||| ||| | ||||||||||||||| Sbjct: 98148 cacgacgagattgaccttgagttcttggggaac 98180
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 gggggccctcctcgccgtggtggcc 73 ||||||||||||| ||||||||||| Sbjct: 1460587 gggggccctcctcaccgtggtggcc 1460611
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 347 cacgacgagatcgacttcgagttcttggggaac 379 ||||||||||| ||| | ||||||||||||||| Sbjct: 11974 cacgacgagattgaccttgagttcttggggaac 12006
>dbj|AK073730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F24, full insert sequence Length = 1123 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 gacgagatcgacttcgagttc 370 ||||||||||||||||||||| Sbjct: 355 gacgagatcgacttcgagttc 375
>emb|Z60540.1|HS27G11R H.sapiens CpG island DNA genomic Mse1 fragment, clone 27g11, reverse read cpg27g11.rt1a Length = 321 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 agaggaggaggaagagaggcc 28 ||||||||||||||||||||| Sbjct: 55 agaggaggaggaagagaggcc 75
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 273 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 325 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 302 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 354
>dbj|AP001858.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-959F10, complete sequence Length = 210723 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 agaggaggaggaagagaggcc 28 ||||||||||||||||||||| Sbjct: 46295 agaggaggaggaagagaggcc 46315
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 288 tcggcggcgactccgccggcacagtcacc 316 |||||||||||| ||||||||| |||||| Sbjct: 2481622 tcggcggcgacttcgccggcaccgtcacc 2481594
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 cgcgggggccctcctcgccgtggtg 70 |||||||||||||||||||| |||| Sbjct: 1592243 cgcgggggccctcctcgccgcggtg 1592219
>gb|AC134606.4| Mus musculus BAC clone RP23-52K6 from 9, complete sequence Length = 171495 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gaggaggaggaagagaggccg 29 ||||||||||||||||||||| Sbjct: 118167 gaggaggaggaagagaggccg 118187
>dbj|AB015428.1| Pisum sativum mRNA for EXGT1, complete cds Length = 1125 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 353 gagatcgacttcgagttcttggggaacag 381 ||||| || |||||||||||||||||||| Sbjct: 331 gagatagatttcgagttcttggggaacag 359
>dbj|AB042531.1| Pisum sativum PsEXT mRNA for xyloglucan endotransglycosylase, complete cds Length = 1325 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 353 gagatcgacttcgagttcttggggaacag 381 ||||| || |||||||||||||||||||| Sbjct: 520 gagatagatttcgagttcttggggaacag 548
>ref|NM_105205.2| Arabidopsis thaliana ATXTH17; hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT1G65310 (ATXTH17) mRNA, complete cds Length = 1003 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 353 gagatcgacttcgagttcttggggaaca 380 |||||||| |||||||||||||| |||| Sbjct: 310 gagatcgatttcgagttcttgggaaaca 337
>ref|NM_125135.1| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT5G57540 mRNA, complete cds Length = 855 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 atcgacttcgagttcttggg 375 |||||||||||||||||||| Sbjct: 301 atcgacttcgagttcttggg 320
>ref|NM_188932.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2403 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcgggggccctcctcgcc 64 |||||||||||||||||||| Sbjct: 425 ccgcgggggccctcctcgcc 444
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 ccgccggcacagtcaccgccttctacctgtcg 331 |||||||||| ||||||||||||||||||| Sbjct: 305 ccgccggcaccaacaccgccttctacctgtcg 336
>ref|XM_958677.1| Neurospora crassa OR74A hypothetical protein (NCU07476.1) partial mRNA Length = 2763 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 agaggaggaggaagagaggc 27 |||||||||||||||||||| Sbjct: 135 agaggaggaggaagagaggc 116
>ref|XM_327761.1| Neurospora crassa OR74A hypothetical protein (NCU07476.1) partial mRNA Length = 2763 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 agaggaggaggaagagaggc 27 |||||||||||||||||||| Sbjct: 135 agaggaggaggaagagaggc 116
>gb|AC120408.7| Mus musculus chromosome 5, clone RP24-433N14, complete sequence Length = 178077 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 agaggaggaggaagagaggc 27 |||||||||||||||||||| Sbjct: 129665 agaggaggaggaagagaggc 129646
>gb|AC154710.2| Mus musculus BAC clone RP24-357L12 from chromosome 14, complete sequence Length = 163421 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gaggaggaggaagagaggcc 28 |||||||||||||||||||| Sbjct: 22965 gaggaggaggaagagaggcc 22946
>gb|AC005247.2| Homo sapiens PAC clone RP4-740L10 from 7, complete sequence Length = 124096 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ggaggaggaagagaggccgg 30 |||||||||||||||||||| Sbjct: 110181 ggaggaggaagagaggccgg 110162
>gb|AC159294.2| Mus musculus BAC clone RP23-287I15 from chromosome 12, complete sequence Length = 226841 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cagaggaggaggaagagagg 26 |||||||||||||||||||| Sbjct: 105189 cagaggaggaggaagagagg 105170
>gb|AC069067.17| Homo sapiens 3 BAC RP11-454C18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172213 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cagaggaggaggaagagagg 26 |||||||||||||||||||| Sbjct: 29897 cagaggaggaggaagagagg 29878
>ref|NM_001030710.1| Gallus gallus similar to MGC68830 protein (LOC417509), mRNA Length = 3031 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 agaggaggaggaagagaggc 27 |||||||||||||||||||| Sbjct: 2725 agaggaggaggaagagaggc 2706
>emb|BX294146.1| Pirellula sp. strain 1 complete genome; segment 14/24 Length = 324450 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cgtcgcagaactcggagcac 349 |||||||||||||||||||| Sbjct: 236361 cgtcgcagaactcggagcac 236342
>emb|BX323026.5| Mouse DNA sequence from clone RP24-95F14 on chromosome 11 Contains the Ppm1d gene for magnesium-dependent protein phosphatase 1D delta isoform, the 5' end of the Bcas3 gene for breast carcinoma amplified sequence 3 and a CpG island, complete sequence Length = 130030 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gggaggtgcagctgtccctc 211 |||||||||||||||||||| Sbjct: 3014 gggaggtgcagctgtccctc 3033
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cagaggaggaggaagagagg 26 |||||||||||||||||||| Sbjct: 76776 cagaggaggaggaagagagg 76795
>emb|AJ719622.1| Gallus gallus mRNA for hypothetical protein, clone 4k12 Length = 3031 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 agaggaggaggaagagaggc 27 |||||||||||||||||||| Sbjct: 2725 agaggaggaggaagagaggc 2706
>gb|AC105401.5| Homo sapiens BAC clone RP11-765K14 from 4, complete sequence Length = 30064 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 acagaggaggaggaagagag 25 |||||||||||||||||||| Sbjct: 11735 acagaggaggaggaagagag 11754
>gb|AC087258.14| Homo sapiens 12p BAC RP11-686N4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127018 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 taacagaggaggaggaagag 23 |||||||||||||||||||| Sbjct: 10039 taacagaggaggaggaagag 10020
>gb|DQ320658.2| Rosa x borboniana xyloglucan endotransglucosylase/hydrolase 2 (Xth2) mRNA, complete cds Length = 1336 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 gagttcttggggaacaggac 384 |||||||||||||||||||| Sbjct: 408 gagttcttggggaacaggac 427
>emb|CR522991.1| Gallus gallus finished cDNA, clone ChEST799i23 Length = 993 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 agaggaggaggaagagaggc 27 |||||||||||||||||||| Sbjct: 962 agaggaggaggaagagaggc 943
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aacagaggaggaggaagaga 24 |||||||||||||||||||| Sbjct: 49160 aacagaggaggaggaagaga 49179
>gb|AC123660.8| Mus musculus chromosome 3, clone RP23-196E24, complete sequence Length = 211632 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 taacagaggaggaggaagag 23 |||||||||||||||||||| Sbjct: 52307 taacagaggaggaggaagag 52326
>gb|AC017016.5|AC017016 Homo sapiens BAC clone RP11-152H13 from 3, complete sequence Length = 180681 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cagaggaggaggaagagagg 26 |||||||||||||||||||| Sbjct: 140318 cagaggaggaggaagagagg 140337
>gb|AF370621.1|AF370621 Arabidopsis thaliana xylglucan endo-transglycolsylase-like protein (T8F5.9) mRNA, complete cds Length = 849 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 353 gagatcgacttcgagttcttggggaaca 380 |||||||| |||||||||||||| |||| Sbjct: 310 gagatcgatttcgagttcttgggaaaca 337
>gb|AC006435.7|AC006435 Homo sapiens chromosome 17, clone RP5-59D14, complete sequence Length = 139267 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cagaggaggaggaagagagg 26 |||||||||||||||||||| Sbjct: 135775 cagaggaggaggaagagagg 135756
>gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 sequence, complete sequence Length = 88292 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 353 gagatcgacttcgagttcttggggaaca 380 |||||||| |||||||||||||| |||| Sbjct: 23747 gagatcgatttcgagttcttgggaaaca 23774
>gb|AC112666.9| Mus musculus chromosome 3, clone RP24-119D5, complete sequence Length = 193302 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 taacagaggaggaggaagag 23 |||||||||||||||||||| Sbjct: 114435 taacagaggaggaggaagag 114454
>gb|AC015799.23| Homo sapiens chromosome 17, clone RP11-135N5, complete sequence Length = 180157 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cagaggaggaggaagagagg 26 |||||||||||||||||||| Sbjct: 179480 cagaggaggaggaagagagg 179499
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 cgtcggcggcgactccgccg 305 |||||||||||||||||||| Sbjct: 117501 cgtcggcggcgactccgccg 117520
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ccgcgggggccctcctcgcc 64 |||||||||||||||||||| Sbjct: 79954 ccgcgggggccctcctcgcc 79935
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 atcgacttcgagttcttggg 375 |||||||||||||||||||| Sbjct: 34606 atcgacttcgagttcttggg 34587
>dbj|AK106075.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H11, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 cgtcggcggcgactccgccg 305 |||||||||||||||||||| Sbjct: 657 cgtcggcggcgactccgccg 676
>dbj|AK099262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G05, full insert sequence Length = 1371 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 cgtcggcggcgactccgccg 305 |||||||||||||||||||| Sbjct: 669 cgtcggcggcgactccgccg 688
>dbj|AK070763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066M03, full insert sequence Length = 1378 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 cgtcggcggcgactccgccg 305 |||||||||||||||||||| Sbjct: 694 cgtcggcggcgactccgccg 713
>dbj|AK068398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L03, full insert sequence Length = 1100 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aacagaggaggaggaagaga 24 |||||||||||||||||||| Sbjct: 77 aacagaggaggaggaagaga 58
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 acagaggaggaggaagagag 25 |||||||||||||||||||| Sbjct: 613900 acagaggaggaggaagagag 613881
>gb|AC159104.2| Mus musculus BAC clone RP23-246E2 from chromosome 13, complete sequence Length = 203694 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cagaggaggaggaagagagg 26 |||||||||||||||||||| Sbjct: 15108 cagaggaggaggaagagagg 15089
>gb|AC154246.3| Mus musculus BAC clone RP24-329G5 from chromosome 13, complete sequence Length = 177214 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cagaggaggaggaagagagg 26 |||||||||||||||||||| Sbjct: 110726 cagaggaggaggaagagagg 110745
>gb|AC111084.12| Mus musculus chromosome 7, clone RP23-143J24, complete sequence Length = 205564 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gaggaggaggaagagaggcc 28 |||||||||||||||||||| Sbjct: 136788 gaggaggaggaagagaggcc 136769
>gb|AC105298.21| Mus musculus strain C57BL/6J chromosome 5 clone rp23-224j9, complete sequence Length = 258789 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 agaggaggaggaagagaggc 27 |||||||||||||||||||| Sbjct: 180560 agaggaggaggaagagaggc 180579
>gb|AC141560.4| Mus musculus BAC clone RP23-425A5 from 12, complete sequence Length = 196665 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 agaggaggaggaagagaggccggc 31 |||||||||||| ||||||||||| Sbjct: 98156 agaggaggaggaggagaggccggc 98133
>emb|CT010516.6| Mouse DNA sequence from clone RP23-276H24 on chromosome 14, complete sequence Length = 194815 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gaggaggaggaagagaggcc 28 |||||||||||||||||||| Sbjct: 187557 gaggaggaggaagagaggcc 187538
>gb|AC134670.3| Homo sapiens chromosome 17, clone CTD-2283G11, complete sequence Length = 36100 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cagaggaggaggaagagagg 26 |||||||||||||||||||| Sbjct: 21478 cagaggaggaggaagagagg 21497
>dbj|D86730.1| Nicotiana tabacum mRNA for endoxyloglucan transferase related protein, complete cds Length = 1210 Score = 40.1 bits (20), Expect = 6.1 Identities = 61/75 (81%) Strand = Plus / Plus Query: 344 gagcacgacgagatcgacttcgagttcttggggaacaggacggngcagccgtacatcctg 403 |||||||| ||||| || || || ||||| ||||||||||| | ||| || ||||| || Sbjct: 314 gagcacgatgagatagattttgaattcttagggaacaggactgggcaaccatacattttg 373 Query: 404 cagacgaacgtgttc 418 ||||| || |||||| Sbjct: 374 cagacaaatgtgttc 388 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,453,016 Number of Sequences: 3902068 Number of extensions: 3453016 Number of successful extensions: 132015 Number of sequences better than 10.0: 175 Number of HSP's better than 10.0 without gapping: 183 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130403 Number of HSP's gapped (non-prelim): 1599 length of query: 456 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 434 effective length of database: 17,147,199,772 effective search space: 7441884701048 effective search space used: 7441884701048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
