>MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2) (Demethylase) (DMTase)
          Length = 411

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = -3

Query: 127 PRSEQ-PYQKEQRRPSPRAPGQLEPASRRRCRRLPPEW 17
           PR E  P+      P PR P   E   R  C  LPP W
Sbjct: 122 PRREPVPFPSGSAGPGPRGPRATESGKRMDCPALPPGW 159

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -3

Query: 154 AAAGRRCRLPRSEQPYQKEQRRPSPRAPGQLEPASRRRCRRLPPE 20
           ++ GR  R  RS QP ++    P PRAP    P   RR     P+
Sbjct: 683 SSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQ 727

>MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2)
          Length = 414

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = -3

Query: 124 RSEQPYQKEQRRPSPRAPGQLEPASRRRCRRLPPEW 17
           R   P+      P PR P   E   R  C  LPP W
Sbjct: 127 RDPVPFPSGSSGPGPRGPRATESGKRMDCPALPPGW 162

>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG|
           repeat protein 26) (Glycin-tryptophan protein of 182
           kDa) (GW182 autoantigen) (GW1 protein) (EMSY interactor
           protein)
          Length = 1962

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 127 PRSEQPYQKEQRRPSPRAPGQLEPASRRRCRRLPPEW 17
           P+ +QP Q+ Q +P  + P Q   A  R  R +PP +
Sbjct: 104 PQQQQPQQQPQPQPQQQQPQQQPQALPRYPREVPPRF 140

>AMELX_HUMAN (Q99217) Amelogenin, X isoform precursor|
          Length = 191

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 127 PRSEQPYQKEQRRPSPRAPGQLEPASRRRCRRLPPEWP 14
           P ++QPYQ +  +P P  P Q +P      + LPP+ P
Sbjct: 121 PPAQQPYQPQPVQPQPHQPMQPQPPV-HPMQPLPPQPP 157

>PAIP1_HUMAN (Q9H074) Polyadenylate-binding protein-interacting protein 1|
           (Poly(A)-binding protein-interacting protein 1)
           (PABP-interacting protein 1) (PAIP-1)
          Length = 479

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 127 PRSEQPYQKEQRRP-SPRAPGQLEPASRRRCRRLPP 23
           P    P ++ + +P  P+APG L+P   R+ R  PP
Sbjct: 32  PNGAGPAERARHQPPQPKAPGFLQPPPLRQPRTTPP 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,639,778
Number of Sequences: 219361
Number of extensions: 367917
Number of successful extensions: 1359
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)