ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast42f05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ277096.1|HVU277096 Hordeum vulgare mRNA for putative kinetochore protein (skp1 gene) Length = 842 Score = 601 bits (303), Expect = e-169 Identities = 309/311 (99%) Strand = Plus / Plus Query: 12 aagctcccatctttttcctcttcctccgccgccgccgcgcttcctcatctcgctagggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagctcccatctttttcctcttcctccgccgccgccgcgcttcctcatctcgctagggtt 60 Query: 72 tcctcgtctcccgatcccctcgtcgatggcggccgctggagacgccggcgagaagaagat 131 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctcgtctcccgatcccctcggcgatggcggccgctggagacgccggcgagaagaagat 120 Query: 132 gatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcggtcgccatgga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcggtcgccatgga 180 Query: 192 gtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacggcatcccgctccc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacggcatcccgctccc 240 Query: 252 caacgtcaactccaagatcctctccaagctcatcgagtactgcaacaagcacgtccaggc 311 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 241 caacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacgtccaggc 300 Query: 312 aaagcccgcag 322 ||||||||||| Sbjct: 301 aaagcccgcag 311 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 387 tgaggacctcaagaactgggacgcagagttcgtcaaggtcgaccagg 433 ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 370 tgaggacctcaagaactgggacgcagagttcgtcaaggttgaccagg 416
>emb|AJ577364.1|TAE577364 Triticum aestivum mRNA for putative SKP1 protein Length = 711 Score = 408 bits (206), Expect = e-111 Identities = 221/226 (97%) Strand = Plus / Plus Query: 95 cgatggcggccgctggagacgccggcgagaagaagatgatcacgctcaagagctcggacg 154 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 cgatggcggccgcgggagacgccggcgagaagaagatgatcacgctcaagagctcggacg 63 Query: 155 gcgaggagttcgaggtggaggaggcggtcgccatggagtcgcagacaatccgccacatga 214 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 64 gcgaggagttcgaggtggaggaggcggtggccatggagtcgcagacgatccgccacatga 123 Query: 215 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 183 Query: 275 ccaagctcatcgagtactgcaacaagcacgtccaggcaaagcccgc 320 ||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 184 ccaaggtcatcgagtactgcaacaagcacgtccaggccaagcccgc 229 Score = 89.7 bits (45), Expect = 7e-15 Identities = 50/52 (96%) Strand = Plus / Plus Query: 388 gaggacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncaccc 439 ||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 288 gaggacctcaagaactgggacgccgagttcgtcaaggtcgaccaggccaccc 339
>gb|AY316293.1| Triticum aestivum SKP1/ASK1-like protein (skp1) mRNA, complete cds Length = 822 Score = 400 bits (202), Expect = e-108 Identities = 220/226 (97%) Strand = Plus / Plus Query: 95 cgatggcggccgctggagacgccggcgagaagaagatgatcacgctcaagagctcggacg 154 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 60 cgatggcggccgcgggagacgccggcgagaagaagatgatcacactcaagagctcggacg 119 Query: 155 gcgaggagttcgaggtggaggaggcggtcgccatggagtcgcagacaatccgccacatga 214 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 120 gcgaggagttcgaggtggaggaggcggtggccatggagtcgcagacgatccgccacatga 179 Query: 215 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 239 Query: 275 ccaagctcatcgagtactgcaacaagcacgtccaggcaaagcccgc 320 ||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 240 ccaaggtcatcgagtactgcaacaagcacgtccaggccaagcccgc 285 Score = 89.7 bits (45), Expect = 7e-15 Identities = 50/52 (96%) Strand = Plus / Plus Query: 388 gaggacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncaccc 439 ||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 347 gaggacctcaagaactgggacgccgagttcgtcaaggtcgaccaggccaccc 398
>gb|AY598357.1| Oryza sativa (japonica cultivar-group) skp1 protein mRNA, complete cds Length = 836 Score = 303 bits (153), Expect = 3e-79 Identities = 177/185 (95%) Strand = Plus / Plus Query: 121 gagaagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcg 180 ||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||| Sbjct: 73 gagaagaagatgatcaccctgaagagctccgacggggaggagttcgaggtggaggaggcg 132 Query: 181 gtcgccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacggc 240 || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 133 gtggcgatggagtcgcagacgatccgccacatgatcgaggacgactgcgccgacaacggc 192 Query: 241 atcccgctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaacaag 300 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 193 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 252 Query: 301 cacgt 305 ||||| Sbjct: 253 cacgt 257 Score = 81.8 bits (41), Expect = 2e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 388 gaggacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncaccc 439 ||||||||||||||||||||||| || ||||||||||||||||||| ||||| Sbjct: 337 gaggacctcaagaactgggacgccgacttcgtcaaggtcgaccaggccaccc 388
>dbj|AK111678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158P16, full insert sequence Length = 867 Score = 303 bits (153), Expect = 3e-79 Identities = 177/185 (95%) Strand = Plus / Plus Query: 121 gagaagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcg 180 ||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||| Sbjct: 135 gagaagaagatgatcaccctgaagagctccgacggggaggagttcgaggtggaggaggcg 194 Query: 181 gtcgccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacggc 240 || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 195 gtggcgatggagtcgcagacgatccgccacatgatcgaggacgactgcgccgacaacggc 254 Query: 241 atcccgctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaacaag 300 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 255 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 314 Query: 301 cacgt 305 ||||| Sbjct: 315 cacgt 319 Score = 81.8 bits (41), Expect = 2e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 388 gaggacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncaccc 439 ||||||||||||||||||||||| || ||||||||||||||||||| ||||| Sbjct: 399 gaggacctcaagaactgggacgccgacttcgtcaaggtcgaccaggccaccc 450
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 295 bits (149), Expect = 6e-77 Identities = 176/185 (95%) Strand = Plus / Plus Query: 121 gagaagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcg 180 ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||||| || Sbjct: 106705 gagaagaagatgatcaccctgaagagctccgacggggaggagttcgaggtggaggagccg 106764 Query: 181 gtcgccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacggc 240 || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106765 gtggcgatggagtcgcagacgatccgccacatgatcgaggacgactgcgccgacaacggc 106824 Query: 241 atcccgctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaacaag 300 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106825 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 106884 Query: 301 cacgt 305 ||||| Sbjct: 106885 cacgt 106889 Score = 81.8 bits (41), Expect = 2e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 388 gaggacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncaccc 439 ||||||||||||||||||||||| || ||||||||||||||||||| ||||| Sbjct: 106969 gaggacctcaagaactgggacgccgacttcgtcaaggtcgaccaggccaccc 107020
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 295 bits (149), Expect = 6e-77 Identities = 176/185 (95%) Strand = Plus / Plus Query: 121 gagaagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcg 180 ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||||| || Sbjct: 14963606 gagaagaagatgatcaccctgaagagctccgacggggaggagttcgaggtggaggagccg 14963665 Query: 181 gtcgccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacggc 240 || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 14963666 gtggcgatggagtcgcagacgatccgccacatgatcgaggacgactgcgccgacaacggc 14963725 Query: 241 atcccgctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaacaag 300 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 14963726 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 14963785 Query: 301 cacgt 305 ||||| Sbjct: 14963786 cacgt 14963790 Score = 81.8 bits (41), Expect = 2e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 388 gaggacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncaccc 439 ||||||||||||||||||||||| || ||||||||||||||||||| ||||| Sbjct: 14963870 gaggacctcaagaactgggacgccgacttcgtcaaggtcgaccaggccaccc 14963921
>gb|BT016585.1| Zea mays clone Contig418 mRNA sequence Length = 892 Score = 238 bits (120), Expect = 1e-59 Identities = 171/188 (90%) Strand = Plus / Plus Query: 118 ggcgagaagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggag 177 ||||||||||||||||| || ||||| ||||| || |||||| ||||||||||||| ||| Sbjct: 74 ggcgagaagaagatgataaccctcaaaagctccgatggcgagcagttcgaggtggaagag 133 Query: 178 gcggtcgccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaac 237 ||||| || |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 134 gcggtggcgatggagtcgcagaccatccgccacatgatcgaggatgactgcgccgacaac 193 Query: 238 ggcatcccgctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaac 297 |||||||| || || |||||||||||||||||||| |||||| | ||||||||||||||| Sbjct: 194 ggcatccctcttcctaacgtcaactccaagatcctatccaaggtaatcgagtactgcaac 253 Query: 298 aagcacgt 305 |||||||| Sbjct: 254 aagcacgt 261 Score = 71.9 bits (36), Expect = 2e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 387 tgaggacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncac 437 ||||||||||||||||||||| || || ||||||||||||||||||| ||| Sbjct: 349 tgaggacctcaagaactgggatgcggacttcgtcaaggtcgaccaggccac 399
>gb|AY103829.1| Zea mays PCO151935 mRNA sequence Length = 924 Score = 238 bits (120), Expect = 1e-59 Identities = 171/188 (90%) Strand = Plus / Plus Query: 118 ggcgagaagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggag 177 ||||||||||||||||| || ||||| ||||| || |||||||||||||||||||| ||| Sbjct: 123 ggcgagaagaagatgataaccctcaaaagctccgatggcgaggagttcgaggtggaagag 182 Query: 178 gcggtcgccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaac 237 ||||| || |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 183 gcggtggcgatggagtcgcagaccatccgccacatgatcgaggatgactgcgccgacaac 242 Query: 238 ggcatcccgctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaac 297 || ||||| || || |||||||||||||||||||| |||||| | ||||||||||||||| Sbjct: 243 ggtatccctcttcctaacgtcaactccaagatcctatccaaggtaatcgagtactgcaac 302 Query: 298 aagcacgt 305 |||||||| Sbjct: 303 aagcacgt 310 Score = 71.9 bits (36), Expect = 2e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 387 tgaggacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncac 437 ||||||||||||||||||||| || || ||||||||||||||||||| ||| Sbjct: 398 tgaggacctcaagaactgggatgcggacttcgtcaaggtcgaccaggccac 448
>emb|AJ400725.1|HVU400725 Hordeum vulgare partial mRNA for putative kinetochore protein (skp1-2 gene) Length = 354 Score = 186 bits (94), Expect = 4e-44 Identities = 106/110 (96%) Strand = Plus / Plus Query: 211 atgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatc 270 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 atgattgaagacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatc 67 Query: 271 ctctccaagctcatcgagtactgcaacaagcacgtccaggcaaagcccgc 320 ||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 68 ctctccaaggtcatcgagtactgcaacaagcacgtccaggccaagcccgc 117 Score = 75.8 bits (38), Expect = 1e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 391 gacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncaccc 439 |||||||||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 164 gacctcaagaactgggacgccgagttcgtcaaggtcgaccaagccaccc 212
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 174 bits (88), Expect = 2e-40 Identities = 159/182 (87%), Gaps = 3/182 (1%) Strand = Plus / Minus Query: 124 aagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcggtc 183 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||| |||| Sbjct: 85613 aagaagatgataacgctgaagagctcggatggagaggaattcgaggtggagg---cggtg 85557 Query: 184 gccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacggcatc 243 | ||||||||| ||||| ||||| |||||||||||||| | ||||||||||| || ||| Sbjct: 85556 ggcatggagtctcagaccatccggcacatgatcgaggataaatgcgccgacaatgggatc 85497 Query: 244 ccgctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaacaagcac 303 || ||||||||||| || |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 85496 cccctccccaacgtgaattccaagatcctctccaaggttatcgagtactgcaacaagcac 85437 Query: 304 gt 305 || Sbjct: 85436 gt 85435 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/49 (91%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 391 gacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncaccc 439 ||||||||||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 85400 gacctcaagaactgg-acgccgacttcgtcaaggtcgaccaggccaccc 85353 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgcgcttcc 55 |||||| ||| ||||||||||||||||||| Sbjct: 1467993 ttcctcctccgccgccgccgccgcgcttcc 1467964 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 2781554 ccgccgccgccgcgcttcctc 2781574 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tcctccgccgccgccgcgct 52 |||||||||||||||||||| Sbjct: 21940007 tcctccgccgccgccgcgct 21940026
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 174 bits (88), Expect = 2e-40 Identities = 159/182 (87%), Gaps = 3/182 (1%) Strand = Plus / Minus Query: 124 aagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcggtc 183 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||| |||| Sbjct: 80222 aagaagatgataacgctgaagagctcggatggagaggaattcgaggtggagg---cggtg 80166 Query: 184 gccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacggcatc 243 | ||||||||| ||||| ||||| |||||||||||||| | ||||||||||| || ||| Sbjct: 80165 ggcatggagtctcagaccatccggcacatgatcgaggataaatgcgccgacaatgggatc 80106 Query: 244 ccgctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaacaagcac 303 || ||||||||||| || |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 80105 cccctccccaacgtgaattccaagatcctctccaaggttatcgagtactgcaacaagcac 80046 Query: 304 gt 305 || Sbjct: 80045 gt 80044 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/49 (91%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 391 gacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncaccc 439 ||||||||||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 80009 gacctcaagaactgg-acgccgacttcgtcaaggtcgaccaggccaccc 79962
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 174 bits (88), Expect = 2e-40 Identities = 159/182 (87%), Gaps = 3/182 (1%) Strand = Plus / Minus Query: 124 aagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcggtc 183 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||| |||| Sbjct: 34640 aagaagatgataacgctgaagagctcggatggagaggaattcgaggtggagg---cggtg 34584 Query: 184 gccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacggcatc 243 | ||||||||| ||||| ||||| |||||||||||||| | ||||||||||| || ||| Sbjct: 34583 ggcatggagtctcagaccatccggcacatgatcgaggataaatgcgccgacaatgggatc 34524 Query: 244 ccgctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaacaagcac 303 || ||||||||||| || |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 34523 cccctccccaacgtgaattccaagatcctctccaaggttatcgagtactgcaacaagcac 34464 Query: 304 gt 305 || Sbjct: 34463 gt 34462 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/49 (91%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 391 gacctcaagaactgggacgcagagttcgtcaaggtcgaccaggncaccc 439 ||||||||||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 34427 gacctcaagaactgg-acgccgacttcgtcaaggtcgaccaggccaccc 34380
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 170 bits (86), Expect = 2e-39 Identities = 134/150 (89%) Strand = Plus / Minus Query: 162 gttcgaggtggaggaggcggtcgccatggagtcgcagacaatccgccacatgatcgagga 221 ||||||||| | |||||| || ||||||||||| ||||| |||||||||||||||||||| Sbjct: 20944303 gttcgaggtcgcggaggccgtggccatggagtcccagaccatccgccacatgatcgagga 20944244 Query: 222 cgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaagct 281 | | |||||||||| |||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 20944243 caagtgcgccgacaccggcatcccgctccccaacgtctccgccaagatcctctccaaggt 20944184 Query: 282 catcgagtactgcaacaagcacgtccaggc 311 ||||||||||||| |||||||||| |||| Sbjct: 20944183 aatcgagtactgcagcaagcacgtcgaggc 20944154 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/99 (83%), Gaps = 3/99 (3%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactcca 265 ||||||||||||| ||||||||| ||||||| ||||| ||| |||||||| |||| Sbjct: 5540989 acatgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgcctccg 5540930 Query: 266 agatcctctccaagctcatcgagtactgcaacaagcacg 304 | |||||| ||||| | ||||||||||||||||||||| Sbjct: 5540929 atatcctcgccaaggtggtcgagtactgcaacaagcacg 5540891 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaaga 268 ||||||||||||||| |||| | || |||||| |||| |||||||||||| |||||| Sbjct: 5534107 acatgatcgaggacggctgcacggagaacggcgtccctctccccaacgtcgcctccaacg 5534048 Query: 269 tcctctccaagctcatcgagtactgcaa 296 ||||| ||||| | ||||||||||||| Sbjct: 5534047 tcctcgccaaggtgctcgagtactgcaa 5534020 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaaga 268 |||||||||||||||||||| | || |||||| |||| |||||||||||| |||||| Sbjct: 5500593 acatgatcgaggacgactgcacggagaacggcgtccctctccccaacgtcgcctccaacg 5500534 Query: 269 tcctctccaagctcatcgagtactgcaa 296 ||||| ||||| | |||| |||||||| Sbjct: 5500533 tcctcgccaaggtgctcgactactgcaa 5500506 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtc 258 ||||| |||||||||| ||| ||||||||||| |||| |||||||||||| Sbjct: 14573872 acatggtcgaggacgagtgcaccgacaacggcgtccccctccccaacgtc 14573823 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 406 gacgcagagttcgtcaaggtcgaccag 432 ||||| ||||||||||||||||||||| Sbjct: 20944059 gacgccgagttcgtcaaggtcgaccag 20944033 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgcc 47 ||||||||||||||||||||| Sbjct: 19487064 tcctcttcctccgccgccgcc 19487044 Score = 42.1 bits (21), Expect = 1.5 Identities = 80/99 (80%), Gaps = 3/99 (3%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactcca 265 ||||||||||||| ||||||||| ||||||| ||||| ||| |||||||| | || Sbjct: 5521017 acatgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgccgccg 5520958 Query: 266 agatcctctccaagctcatcgagtactgcaacaagcacg 304 | |||||| ||| | | ||||||||||||||| ||||| Sbjct: 5520957 acatcctcgccatggtggtcgagtactgcaacaggcacg 5520919 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 234 caacggcatcccgctccccaacgtc 258 |||||||||||| |||||||||||| Sbjct: 5418239 caacggcatccctctccccaacgtc 5418215 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 18180608 ttcctcctcctccgccgccgccgc 18180631 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgc 46 |||||||||||||||||||| Sbjct: 5531195 tcctcttcctccgccgccgc 5531214
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 170 bits (86), Expect = 2e-39 Identities = 134/150 (89%) Strand = Plus / Minus Query: 162 gttcgaggtggaggaggcggtcgccatggagtcgcagacaatccgccacatgatcgagga 221 ||||||||| | |||||| || ||||||||||| ||||| |||||||||||||||||||| Sbjct: 36392 gttcgaggtcgcggaggccgtggccatggagtcccagaccatccgccacatgatcgagga 36333 Query: 222 cgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaagct 281 | | |||||||||| |||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 36332 caagtgcgccgacaccggcatcccgctccccaacgtctccgccaagatcctctccaaggt 36273 Query: 282 catcgagtactgcaacaagcacgtccaggc 311 ||||||||||||| |||||||||| |||| Sbjct: 36272 aatcgagtactgcagcaagcacgtcgaggc 36243 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 406 gacgcagagttcgtcaaggtcgaccag 432 ||||| ||||||||||||||||||||| Sbjct: 36148 gacgccgagttcgtcaaggtcgaccag 36122
>gb|AY601675.1| Zantedeschia hybrid cultivar Skp1/Ask1-like protein mRNA, complete cds Length = 807 Score = 135 bits (68), Expect = 1e-28 Identities = 140/164 (85%) Strand = Plus / Plus Query: 142 aagagctcggacggcgaggagttcgaggtggaggaggcggtcgccatggagtcgcagaca 201 |||||||| ||||| |||| |||||||||||||||| |||| ||||||||||||||||| Sbjct: 155 aagagctccgacggggaggtgttcgaggtggaggagacggtagccatggagtcgcagacc 214 Query: 202 atccgccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaac 261 ||||| || ||||||||||||||||| ||| | ||||| ||||||| |||||||||| | Sbjct: 215 atccggaacctgatcgaggacgactgcaccgccgacggcgtcccgctgcccaacgtcacc 274 Query: 262 tccaagatcctctccaagctcatcgagtactgcaacaagcacgt 305 | ||||||| ||||| | ||||||| |||||| |||||||| Sbjct: 275 gggaggatcctcgccaaggtgatcgagttctgcaagaagcacgt 318
>gb|AY104915.1| Zea mays PCO082477 mRNA sequence Length = 1855 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 215 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 274 ||||||||| |||||||||||| |||||||||||||||||||||| |||| | |||||| Sbjct: 236 tcgaggacggctgcgccgacaaaggcatcccgctccccaacgtcacctcccacatcctcg 295 Query: 275 ccaagctcatcgagtactgcaacaagcacg 304 |||| |||||||||| ||||||||||||| Sbjct: 296 tcaaggtcatcgagtattgcaacaagcacg 325
>dbj|AB057427.1| Brassica juncea BjSKP1a mRNA for kinetochore protein, complete cds Length = 531 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaag 267 |||||| |||| ||||||||| |||||||||||||||| || |||||||||| | |||| Sbjct: 116 cacatggtcgaagacgactgcaccgacaacggcatccctcttcccaacgtcaccggcaag 175 Query: 268 atcctctccaagctcatcgagtactgcaacaagcacgtc 306 |||||| ||||| |||||||||| ||||| ||||||||| Sbjct: 176 atcctcgccaaggtcatcgagtattgcaagaagcacgtc 214
>dbj|AB057431.1| Brassica juncea BjSKP1e mRNA for kinetochore protein, complete cds Length = 653 Score = 99.6 bits (50), Expect = 7e-18 Identities = 134/162 (82%) Strand = Plus / Plus Query: 145 agctcggacggcgaggagttcgaggtggaggaggcggtcgccatggagtcgcagacaatc 204 ||||| ||||||||| |||||||| || ||||| || ||| | ||||| ||||| ||| Sbjct: 54 agctccgacggcgagtccttcgaggtcgacgaggccgtggccctcgagtctcagaccatc 113 Query: 205 cgccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactcc 264 |||||| |||| |||||||||| ||||||||| ||||| ||||||||||||| | | Sbjct: 114 gctcacatggtcgaagacgactgcgtcgacaacgggatccctctccccaacgtcaccagc 173 Query: 265 aagatcctctccaagctcatcgagtactgcaacaagcacgtc 306 ||||||||| ||||| | || ||||||||||| ||||||||| Sbjct: 174 aagatcctcgccaaggtgattgagtactgcaagaagcacgtc 215
>gb|DQ206627.1| Brassica napus SKP1 (SKP1) mRNA, complete cds Length = 753 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaag 267 |||||| |||| ||||||||| ||||||||| |||||| || |||||||||| | |||| Sbjct: 138 cacatggtcgaagacgactgcaccgacaacgacatccctcttcccaacgtcaccggcaag 197 Query: 268 atcctctccaagctcatcgagtactgcaacaagcacgtc 306 |||||| ||||| | |||||||||||||| ||||||||| Sbjct: 198 atcctcgccaaggtgatcgagtactgcaagaagcacgtc 236
>emb|Y14857.1|AMFAP2 Antirrhinum majus mRNA for fimbriata-associated protein 2, partial Length = 498 Score = 81.8 bits (41), Expect = 2e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 144 gagctcggacggcgaggagttcgaggtggaggaggcggtcgccatggagtcgcagacaat 203 |||||| |||||||||| |||||||| || |||||| ||||| || ||| || || || Sbjct: 39 gagctccgacggcgaggttttcgaggtcgacgaggcgatcgccttgttgtctcaaacgat 98 Query: 204 ccgccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactc 263 | ||||||||||||||||| ||||||||||||| ||||| | || ||||||| | Sbjct: 99 caagcacatgatcgaggacgattgcgccgacaacgtgatccccttgcctaacgtcaccgg 158 Query: 264 caagatcctctccaagctcatcgagtactgcaa 296 ||| ||||||||||| |||||||||||||||| Sbjct: 159 caaaatcctctccaaagtcatcgagtactgcaa 191
>dbj|AB057432.1| Brassica juncea BjSKP1f mRNA for kinetochore protein, complete cds Length = 807 Score = 81.8 bits (41), Expect = 2e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 142 aagagctcggacggcgaggagttcgaggtggaggaggcggtcgccatggagtcgcagaca 201 |||||||| || |||||| |||||||| || |||||||||||| | ||||| ||||| Sbjct: 108 aagagctccgatggcgagtctttcgaggtcgacgaggcggtcgccctcgagtctcagacc 167 Query: 202 atccgccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaac 261 || ||||||| | || |||||||||| ||||||||| |||| || |||||||||| Sbjct: 168 atagcccacatggttgaagacgactgcgtcgacaacggtgtccctcttcccaacgtcacg 227 Query: 262 tccaagatcctctccaagctcatcgagtactgcaacaagcacgtc 306 |||||||||| ||||| | || ||||||||||| ||||||||| Sbjct: 228 agcaagatcctcgccaaggtgattgagtactgcaagaagcacgtc 272
>dbj|AB057429.1| Brassica juncea BjSKP1c mRNA for kinetochore protein, complete cds Length = 734 Score = 79.8 bits (40), Expect = 7e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 207 ccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaa 266 ||||||| |||| |||||||||| ||||||||| ||||||| |||||||||| ||| Sbjct: 97 ccacatggtcgaagacgactgcgtcgacaacggagtcccgcttcccaacgtcacgagcaa 156 Query: 267 gatcctctccaagctcatcgagtactgcaacaagcacgtc 306 ||||||| ||||| | || ||||||||||| ||||||||| Sbjct: 157 gatcctcgccaaggtgattgagtactgcaagaagcacgtc 196
>dbj|AB057430.1| Brassica juncea BjSKP1d mRNA for kinetochore protein, complete cds Length = 596 Score = 77.8 bits (39), Expect = 3e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaag 267 |||||| |||| ||||||||| ||| ||||| ||||| ||||| ||||||| |||| Sbjct: 111 cacatggtcgaagacgactgcatcgagaacggtatccctctccctaacgtcacgagcaag 170 Query: 268 atcctctccaagctcatcgagtactgcaacaagcacgtc 306 |||||| ||||| |||||||||||||||| ||||||||| Sbjct: 171 atcctcgccaaggtcatcgagtactgcaagaagcacgtc 209
>ref|XM_450439.1| Oryza sativa (japonica cultivar-group), mRNA Length = 519 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/99 (83%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactcca 265 ||||||||||||| ||||||||| ||||||| ||||| ||| |||||||| |||| Sbjct: 128 acatgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgcctccg 187 Query: 266 agatcctctccaagctcatcgagtactgcaacaagcacg 304 | |||||| ||||| | ||||||||||||||||||||| Sbjct: 188 atatcctcgccaaggtggtcgagtactgcaacaagcacg 226
>ref|NM_186291.1| Oryza sativa (japonica cultivar-group), mRNA Length = 495 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgac-aacggcatcccgctccccaacgtcaactccaag 267 |||||||||||||||||||| | ||| ||||| | || |||||||||||| ||||||| Sbjct: 134 acatgatcgaggacgactgcac-gacgaacggggtgcctctccccaacgtcgcctccaag 192 Query: 268 atcctctccaagctcatcgagtactgcaacaagcacg 304 ||||| ||||| ||||||| ||||||| |||||||| Sbjct: 193 gtcctcgccaaggtcatcgaatactgcatcaagcacg 229
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgac-aacggcatcccgctccccaacgtcaactccaag 267 |||||||||||||||||||| | ||| ||||| | || |||||||||||| ||||||| Sbjct: 2343703 acatgatcgaggacgactgcac-gacgaacggggtgcctctccccaacgtcgcctccaag 2343761 Query: 268 atcctctccaagctcatcgagtactgcaacaagcacg 304 ||||| ||||| ||||||| ||||||| |||||||| Sbjct: 2343762 gtcctcgccaaggtcatcgaatactgcatcaagcacg 2343798 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 225 ctgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctc 273 ||||| |||||| ||| ||||||||||||||||| ||||||||| |||| Sbjct: 25854338 ctgcgtcgacaagggcttcccgctccccaacgtcgactccaagaccctc 25854386 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 240 catcccgctccccaacgtcaactccaagatcctc 273 ||||||||||||||||||| ||||||||| |||| Sbjct: 25864975 catcccgctccccaacgtcgactccaagaccctc 25865008 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 247 ctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaacaagcacg 304 |||||||||||| ||||||| ||||| ||||| ||||||| |||||| |||||||| Sbjct: 2318323 ctccccaacgtcgcctccaaggtcctcgccaaggtcatcgaatactgcgtcaagcacg 2318266 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Plus Query: 129 gatgatcacgctcaagagctcggacggcgag 159 ||||||||| ||||||||||| ||||||||| Sbjct: 25833926 gatgatcaccctcaagagctccgacggcgag 25833956 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaa 254 |||||||||| ||| ||||||||| |||| |||||||||||||| Sbjct: 25851427 acatgatcgacaacgtctgcgccgatcacgggatcccgctccccaa 25851472 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgcc 47 |||||||||||||||||||||| Sbjct: 5710416 ttcctcttcctccgccgccgcc 5710437 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 gaggacctcaagaactgggac 408 ||||||||||||||||||||| Sbjct: 12723897 gaggacctcaagaactgggac 12723917 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgcc 47 ||||||||||||||||||||| Sbjct: 10771275 tcctcttcctccgccgccgcc 10771255 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 242 tcccgctccccaacgtcaactccaagatcctc 273 ||||||||||||||||| |||| |||| |||| Sbjct: 25861375 tcccgctccccaacgtcgactctaagaccctc 25861406 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 16878741 tcctcctcctccgccgccgccgcg 16878764 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cgccgccgcgcttcctcatc 60 |||||||||||||||||||| Sbjct: 5924784 cgccgccgcgcttcctcatc 5924765 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ggagttcgaggtggaggagg 178 |||||||||||||||||||| Sbjct: 5561023 ggagttcgaggtggaggagg 5561004 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ggagttcgaggtggaggagg 178 |||||||||||||||||||| Sbjct: 5560939 ggagttcgaggtggaggagg 5560920 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 3235606 tcctcctcctccgccgccgccgcg 3235583
>dbj|AP005547.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1031_C12 Length = 157574 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/99 (83%), Gaps = 3/99 (3%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactcca 265 ||||||||||||| ||||||||| ||||||| ||||| ||| |||||||| |||| Sbjct: 146828 acatgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgcctccg 146769 Query: 266 agatcctctccaagctcatcgagtactgcaacaagcacg 304 | |||||| ||||| | ||||||||||||||||||||| Sbjct: 146768 atatcctcgccaaggtggtcgagtactgcaacaagcacg 146730 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaaga 268 ||||||||||||||| |||| | || |||||| |||| |||||||||||| |||||| Sbjct: 139946 acatgatcgaggacggctgcacggagaacggcgtccctctccccaacgtcgcctccaacg 139887 Query: 269 tcctctccaagctcatcgagtactgcaa 296 ||||| ||||| | ||||||||||||| Sbjct: 139886 tcctcgccaaggtgctcgagtactgcaa 139859 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaaga 268 |||||||||||||||||||| | || |||||| |||| |||||||||||| |||||| Sbjct: 106432 acatgatcgaggacgactgcacggagaacggcgtccctctccccaacgtcgcctccaacg 106373 Query: 269 tcctctccaagctcatcgagtactgcaa 296 ||||| ||||| | |||| |||||||| Sbjct: 106372 tcctcgccaaggtgctcgactactgcaa 106345 Score = 42.1 bits (21), Expect = 1.5 Identities = 80/99 (80%), Gaps = 3/99 (3%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactcca 265 ||||||||||||| ||||||||| ||||||| ||||| ||| |||||||| | || Sbjct: 126856 acatgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgccgccg 126797 Query: 266 agatcctctccaagctcatcgagtactgcaacaagcacg 304 | |||||| ||| | | ||||||||||||||| ||||| Sbjct: 126796 acatcctcgccatggtggtcgagtactgcaacaggcacg 126758 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 234 caacggcatcccgctccccaacgtc 258 |||||||||||| |||||||||||| Sbjct: 24078 caacggcatccctctccccaacgtc 24054 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgc 46 |||||||||||||||||||| Sbjct: 137034 tcctcttcctccgccgccgc 137053
>dbj|AP005878.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0012I09 Length = 127774 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/99 (83%), Gaps = 3/99 (3%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactcca 265 ||||||||||||| ||||||||| ||||||| ||||| ||| |||||||| |||| Sbjct: 19519 acatgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgcctccg 19460 Query: 266 agatcctctccaagctcatcgagtactgcaacaagcacg 304 | |||||| ||||| | ||||||||||||||||||||| Sbjct: 19459 atatcctcgccaaggtggtcgagtactgcaacaagcacg 19421 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaaga 268 ||||||||||||||| |||| | || |||||| |||| |||||||||||| |||||| Sbjct: 12637 acatgatcgaggacggctgcacggagaacggcgtccctctccccaacgtcgcctccaacg 12578 Query: 269 tcctctccaagctcatcgagtactgcaa 296 ||||| ||||| | ||||||||||||| Sbjct: 12577 tcctcgccaaggtgctcgagtactgcaa 12550 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgc 46 |||||||||||||||||||| Sbjct: 9725 tcctcttcctccgccgccgc 9744
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgac-aacggcatcccgctccccaacgtcaactccaag 267 |||||||||||||||||||| | ||| ||||| | || |||||||||||| ||||||| Sbjct: 46711 acatgatcgaggacgactgcac-gacgaacggggtgcctctccccaacgtcgcctccaag 46769 Query: 268 atcctctccaagctcatcgagtactgcaacaagcacg 304 ||||| ||||| ||||||| ||||||| |||||||| Sbjct: 46770 gtcctcgccaaggtcatcgaatactgcatcaagcacg 46806 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 247 ctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaacaagcacg 304 |||||||||||| ||||||| ||||| ||||| ||||||| |||||| |||||||| Sbjct: 21331 ctccccaacgtcgcctccaaggtcctcgccaaggtcatcgaatactgcgtcaagcacg 21274
>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_B12 Length = 121362 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgac-aacggcatcccgctccccaacgtcaactccaag 267 |||||||||||||||||||| | ||| ||||| | || |||||||||||| ||||||| Sbjct: 117402 acatgatcgaggacgactgcac-gacgaacggggtgcctctccccaacgtcgcctccaag 117460 Query: 268 atcctctccaagctcatcgagtactgcaacaagcacg 304 ||||| ||||| ||||||| ||||||| |||||||| Sbjct: 117461 gtcctcgccaaggtcatcgaatactgcatcaagcacg 117497 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 247 ctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaacaagcacg 304 |||||||||||| ||||||| ||||| ||||| ||||||| |||||| |||||||| Sbjct: 92022 ctccccaacgtcgcctccaaggtcctcgccaaggtcatcgaatactgcgtcaagcacg 91965
>ref|XM_450437.1| Oryza sativa (japonica cultivar-group), mRNA Length = 498 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaaga 268 ||||||||||||||| |||| | || |||||| |||| |||||||||||| |||||| Sbjct: 119 acatgatcgaggacggctgcacggagaacggcgtccctctccccaacgtcgcctccaacg 178 Query: 269 tcctctccaagctcatcgagtactgcaa 296 ||||| ||||| | ||||||||||||| Sbjct: 179 tcctcgccaaggtgctcgagtactgcaa 206
>ref|XM_450430.1| Oryza sativa (japonica cultivar-group), mRNA Length = 804 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaaga 268 |||||||||||||||||||| | || |||||| |||| |||||||||||| |||||| Sbjct: 249 acatgatcgaggacgactgcacggagaacggcgtccctctccccaacgtcgcctccaacg 308 Query: 269 tcctctccaagctcatcgagtactgcaa 296 ||||| ||||| | |||| |||||||| Sbjct: 309 tcctcgccaaggtgctcgactactgcaa 336
>dbj|AK107960.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-C08, full insert sequence Length = 803 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaaga 268 |||||||||||||||||||| | || |||||| |||| |||||||||||| |||||| Sbjct: 249 acatgatcgaggacgactgcacggagaacggcgtccctctccccaacgtcgcctccaacg 308 Query: 269 tcctctccaagctcatcgagtactgcaa 296 ||||| ||||| | |||| |||||||| Sbjct: 309 tcctcgccaaggtgctcgactactgcaa 336
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtc 258 ||||| |||||||||| ||| ||||||||||| |||| |||||||||||| Sbjct: 72161 acatggtcgaggacgagtgcaccgacaacggcgtccccctccccaacgtc 72112
>ref|NM_128129.2| Arabidopsis thaliana ASK3; protein binding / ubiquitin-protein ligase AT2G25700 (ASK3) mRNA, complete cds Length = 734 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 123 gaagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcggt 182 |||||||||||||| ||||||||||| ||||| || |||||||| ||||| || || Sbjct: 87 gaagaagatgatcatcctcaagagctccgacggtgaatccttcgaggtcgaggaagccgt 146 Query: 183 cgccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacgg 239 ||| | ||||| ||||| || |||||||||||||||||||||| ||| ||||| Sbjct: 147 cgcggtcgagtcccagacgattaagcacatgatcgaggacgactgcgtcgataacgg 203
>ref|NM_193016.2| Oryza sativa (japonica cultivar-group), mRNA Length = 843 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 225 ctgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctc 273 ||||| |||||| ||| ||||||||||||||||| ||||||||| |||| Sbjct: 265 ctgcgtcgacaagggcttcccgctccccaacgtcgactccaagaccctc 313
>gb|AY139806.1| Arabidopsis thaliana At2g25700/F3N11.15 mRNA, complete cds Length = 492 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 123 gaagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcggt 182 |||||||||||||| ||||||||||| ||||| || |||||||| ||||| || || Sbjct: 12 gaagaagatgatcatcctcaagagctccgacggtgaatccttcgaggtcgaggaagccgt 71 Query: 183 cgccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacgg 239 ||| | ||||| ||||| || |||||||||||||||||||||| ||| ||||| Sbjct: 72 cgcggtcgagtcccagacgattaagcacatgatcgaggacgactgcgtcgataacgg 128
>gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete sequence Length = 100745 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Minus Query: 123 gaagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcggt 182 |||||||||||||| ||||||||||| ||||| || |||||||| ||||| || || Sbjct: 66504 gaagaagatgatcatcctcaagagctccgacggtgaatccttcgaggtcgaggaagccgt 66445 Query: 183 cgccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacgg 239 ||| | ||||| ||||| || |||||||||||||||||||||| ||| ||||| Sbjct: 66444 cgcggtcgagtcccagacgattaagcacatgatcgaggacgactgcgtcgataacgg 66388
>gb|AY052700.1| Arabidopsis thaliana At2g25700/F3N11.15 mRNA, complete cds Length = 735 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 123 gaagaagatgatcacgctcaagagctcggacggcgaggagttcgaggtggaggaggcggt 182 |||||||||||||| ||||||||||| ||||| || |||||||| ||||| || || Sbjct: 87 gaagaagatgatcatcctcaagagctccgacggtgaatccttcgaggtcgaggaagccgt 146 Query: 183 cgccatggagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacgg 239 ||| | ||||| ||||| || |||||||||||||||||||||| ||| ||||| Sbjct: 147 cgcggtcgagtcccagacgattaagcacatgatcgaggacgactgcgtcgataacgg 203
>dbj|AK064628.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-F08, full insert sequence Length = 843 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 225 ctgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctc 273 ||||| |||||| ||| ||||||||||||||||| ||||||||| |||| Sbjct: 265 ctgcgtcgacaagggcttcccgctccccaacgtcgactccaagaccctc 313
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 225 ctgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctc 273 ||||| |||||| ||| ||||||||||||||||| ||||||||| |||| Sbjct: 24786 ctgcgtcgacaagggcttcccgctccccaacgtcgactccaagaccctc 24834 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 240 catcccgctccccaacgtcaactccaagatcctc 273 ||||||||||||||||||| ||||||||| |||| Sbjct: 35423 catcccgctccccaacgtcgactccaagaccctc 35456 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Plus Query: 129 gatgatcacgctcaagagctcggacggcgag 159 ||||||||| ||||||||||| ||||||||| Sbjct: 4374 gatgatcaccctcaagagctccgacggcgag 4404 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaa 254 |||||||||| ||| ||||||||| |||| |||||||||||||| Sbjct: 21875 acatgatcgacaacgtctgcgccgatcacgggatcccgctccccaa 21920 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 242 tcccgctccccaacgtcaactccaagatcctc 273 ||||||||||||||||| |||| |||| |||| Sbjct: 31823 tcccgctccccaacgtcgactctaagaccctc 31854
>gb|AF494084.1| Nicotiana benthamiana SKP1 mRNA, complete cds Length = 462 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 190 gagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacggcatccc 245 ||||||||||||||| || |||||||| |||||||||||||||| | ||||||| Sbjct: 67 gagtcgcagacaatcaagcatatgatcgaagacgactgcgccgacaccagcatccc 122
>gb|AF070967.1|AF070967 Nicotiana clevelandii SKP1-like protein mRNA, complete cds Length = 769 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 190 gagtcgcagacaatccgccacatgatcgaggacgactgcgccgacaacggcatccc 245 ||||||||||||||| || |||||||| |||||||||||||||| | ||||||| Sbjct: 103 gagtcgcagacaatcaagcatatgatcgaagacgactgcgccgacaccagcatccc 158
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 270 cctctccaagctcatcgagtactgcaacaagcacg 304 |||||||||| ||||||||||||||| |||||||| Sbjct: 782025 cctctccaagatcatcgagtactgcaccaagcacg 781991 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 207 ccacatgatcgaggacgactgcgccgac 234 ||||||||||||||||| |||||||||| Sbjct: 782068 ccacatgatcgaggacggctgcgccgac 782041 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 270 cctctccaagctcatcgagtactgcaacaagcacg 304 |||| ||||| ||||||||||||||| |||||||| Sbjct: 786194 cctcgccaaggtcatcgagtactgcaccaagcacg 786160 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 cctcttcctccgccgccgccgc 49 |||||||||||||||||||||| Sbjct: 18967506 cctcttcctccgccgccgccgc 18967527
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 270 cctctccaagctcatcgagtactgcaacaagcacg 304 |||||||||| ||||||||||||||| |||||||| Sbjct: 65159 cctctccaagatcatcgagtactgcaccaagcacg 65125 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 207 ccacatgatcgaggacgactgcgccgac 234 ||||||||||||||||| |||||||||| Sbjct: 65202 ccacatgatcgaggacggctgcgccgac 65175 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 270 cctctccaagctcatcgagtactgcaacaagcacg 304 |||| ||||| ||||||||||||||| |||||||| Sbjct: 69328 cctcgccaaggtcatcgagtactgcaccaagcacg 69294
>dbj|AB057428.1| Brassica juncea BjSKP1b mRNA for kinetochore protein, partial cds Length = 472 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaag 267 |||||| |||| |||||| ||| ||||||||| ||||| || |||||||||| |||| Sbjct: 113 cacatggtcgaagacgacggcgtcgacaacgggatccctcttcccaacgtcacgagcaag 172 Query: 268 atcctctccaagctcatcgagtactgcaacaagcacgtc 306 |||||| | ||| | || ||||||||||| || |||||| Sbjct: 173 atcctcgcgaaggtgattgagtactgcaagaaacacgtc 211
>ref|NM_193019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 741 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 240 catcccgctccccaacgtcaactccaagatcctc 273 ||||||||||||||||||| ||||||||| |||| Sbjct: 171 catcccgctccccaacgtcgactccaagaccctc 204
>ref|NM_186284.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 247 ctccccaacgtcaactccaagatcctctccaagctcatcgagtactgcaacaagcacg 304 |||||||||||| ||||||| ||||| ||||| ||||||| |||||| |||||||| Sbjct: 151 ctccccaacgtcgcctccaaggtcctcgccaaggtcatcgaatactgcgtcaagcacg 208
>ref|XM_482078.1| Oryza sativa (japonica cultivar-group), mRNA Length = 510 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 207 ccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 259 ||||||||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 108 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 160
>gb|AY702087.1| Nicotiana tabacum cultivar Samsun NN SKP1 (SKP1) mRNA, complete cds Length = 653 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 142 aagagctcggacggcgaggagttcgaggtggaggaggcggt 182 |||||||||||||||||| |||||||||||||| ||||| Sbjct: 100 aagagctcggacggcgagactttcgaggtggaggaagcggt 140
>gb|AY600992.1| Oryza sativa (japonica cultivar-group) skp1-like protein (osk3) mRNA, complete cds Length = 626 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 207 ccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 259 ||||||||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 126 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 178
>gb|AY336992.1| Oryza sativa (japonica cultivar-group) SKP1 mRNA, complete cds Length = 751 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 207 ccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 259 ||||||||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 168 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 220
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 207 ccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 259 ||||||||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 17618140 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 17618192 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 22085858 tcctcttcctccgccgccgccgc 22085836 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 207 ccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 259 ||||||||||||||| |||||| |||| || || | || ||||||||||||| Sbjct: 17610758 ccacatgatcgaggatgactgcaccgataatggggttcccctccccaacgtca 17610810 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ctcttcctccgccgccgccgc 49 ||||||||||||||||||||| Sbjct: 9105229 ctcttcctccgccgccgccgc 9105209 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgcc 47 ||||||||||||||||||||| Sbjct: 4376070 tcctcttcctccgccgccgcc 4376050 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 25319858 tcctcctcctccgccgccgccgcg 25319881 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 22059309 ttcctcctcctccgccgccgccgc 22059286
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 207 ccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 259 ||||||||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 94790 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 94842 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 207 ccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 259 ||||||||||||||| |||||| |||| || || | || ||||||||||||| Sbjct: 87408 ccacatgatcgaggatgactgcaccgataatggggttcccctccccaacgtca 87460
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 207 ccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 259 ||||||||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 3529 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 3581
>ref|XM_757402.1| Ustilago maydis 521 hypothetical protein (UM06348.1) partial mRNA Length = 3993 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||||||||||||||||||||| Sbjct: 156 ttcctcttcctccgccgccgccgc 179
>ref|NM_185417.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Plus Query: 270 cctctccaagctcatcgagtactgcaacaagcacg 304 |||| ||||| ||||||||||||||| |||||||| Sbjct: 183 cctcgccaaggtcatcgagtactgcaccaagcacg 217
>ref|XM_507250.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1117_F10.6 mRNA Length = 3919 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 556 tcctcttcctccgccgccgccgc 578
>ref|XM_474463.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1434 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 1316 tcctcttcctccgccgccgccgc 1294
>ref|NM_001031192.1| Gallus gallus diacylglycerol kinase, zeta 104kDa (DGKZ), mRNA Length = 4728 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 143 tcctcttcctccgccgccgccgc 165
>ref|NM_196037.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0058E19.6), mRNA Length = 513 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Plus Query: 389 aggacctcaagaactgggacgcagagttcgtcaag 423 ||||||||||||||| |||||| || ||||||||| Sbjct: 371 aggacctcaagaacttggacgccgacttcgtcaag 405
>ref|XM_479209.1| Oryza sativa (japonica cultivar-group), mRNA Length = 513 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Plus Query: 129 gatgatcacgctcaagagctcggacggcgag 159 ||||||||| ||||||||||| ||||||||| Sbjct: 42 gatgatcaccctcaagagctccgacggcgag 72
>gb|AC104283.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1607_F09, complete sequence Length = 95755 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgcgct 52 |||||||||||||||||||||| |||| Sbjct: 32418 ttcctcttcctccgccgccgccccgct 32392
>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0058E19, complete sequence Length = 147706 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Plus Query: 389 aggacctcaagaactgggacgcagagttcgtcaag 423 ||||||||||||||| |||||| || ||||||||| Sbjct: 48477 aggacctcaagaacttggacgccgacttcgtcaag 48511
>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete sequence Length = 137220 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 47374 tcctcttcctccgccgccgccgc 47352
>gb|AY600991.1| Oryza sativa (japonica cultivar-group) skp1-like protein (osk2) mRNA, complete cds Length = 566 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Plus Query: 270 cctctccaagctcatcgagtactgcaacaagcacg 304 |||| ||||| ||||||||||||||| |||||||| Sbjct: 236 cctcgccaaggtcatcgagtactgcaccaagcacg 270
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 17324997 tcctcttcctccgccgccgccgc 17324975 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||||||| |||||||||||||| Sbjct: 28809851 tcctcttccgccgccgccgccgcg 28809828
>emb|AL096853.13|HSFF96H12 Human DNA sequence from clone CITF22-96H12 on chromosome 22, complete sequence Length = 17027 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 11603 tcctcttcctccgccgccgccgc 11581
>emb|AJ851406.1| Gallus gallus mRNA for hypothetical protein, clone 1p14 Length = 4728 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 143 tcctcttcctccgccgccgccgc 165
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 21099 tcctcttcctccgccgccgccgc 21121
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 35335084 tcctcttcctccgccgccgccgc 35335062 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgcgct 52 |||||||||||||||||||||| |||| Sbjct: 25755367 ttcctcttcctccgccgccgccccgct 25755341 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgcc 47 |||||||||||||||||||||| Sbjct: 27914703 ttcctcttcctccgccgccgcc 27914682 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 35375775 ccgccgccgccgcgcttcctc 35375755 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 32111047 ccgccgccgccgcgcttcctc 32111027 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 28353090 ttcctcctcctccgccgccgccgc 28353113
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 389 aggacctcaagaactgggacgcagagttcgtcaag 423 ||||||||||||||| |||||| || ||||||||| Sbjct: 10632374 aggacctcaagaacttggacgccgacttcgtcaag 10632340 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcgc 51 ||||| ||||||||||||||||||| Sbjct: 18595630 tcctcctcctccgccgccgccgcgc 18595654 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 13995707 tcctcctcctccgccgccgccgcg 13995684
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgcgct 52 |||||||||||||||||||||| |||| Sbjct: 2465396 ttcctcttcctccgccgccgccccgct 2465370 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcgct 52 ||||| |||||||||||||||||||| Sbjct: 28267009 tcctcctcctccgccgccgccgcgct 28266984
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 17318538 tcctcttcctccgccgccgccgc 17318516 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||||||| |||||||||||||| Sbjct: 28901175 tcctcttccgccgccgccgccgcg 28901152
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgcgct 52 |||||||||||||||||||||| |||| Sbjct: 8342849 ttcctcttcctccgccgccgccccgct 8342875 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgcgct 52 |||||||||||||||||||||| |||| Sbjct: 1158455 ttcctcttcctccgccgccgccccgct 1158481 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ctcttcctccgccgccgccgc 49 ||||||||||||||||||||| Sbjct: 39356547 ctcttcctccgccgccgccgc 39356567 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 23004998 tcctcctcctccgccgccgccgcg 23004975 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 ||||||||||||| |||||||||| Sbjct: 20702553 ttcctcttcctccaccgccgccgc 20702530 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tcttcctccgccgccgccgc 49 |||||||||||||||||||| Sbjct: 144382 tcttcctccgccgccgccgc 144363
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgcgct 52 |||||||||||||||||||||| |||| Sbjct: 136780 ttcctcttcctccgccgccgccccgct 136806
>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0503G09 Length = 59843 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgcgct 52 |||||||||||||||||||||| |||| Sbjct: 7475 ttcctcttcctccgccgccgccccgct 7501
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgcgct 52 |||||||||||||||||||||| |||| Sbjct: 127769 ttcctcttcctccgccgccgccccgct 127795
>dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C01 Length = 78600 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgcgct 52 |||||||||||||||||||||| |||| Sbjct: 12758 ttcctcttcctccgccgccgccccgct 12784
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 48821 tcctcttcctccgccgccgccgc 48799 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 22272 ttcctcctcctccgccgccgccgc 22249
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Plus Query: 129 gatgatcacgctcaagagctcggacggcgag 159 ||||||||| ||||||||||| ||||||||| Sbjct: 151088 gatgatcaccctcaagagctccgacggcgag 151118
>dbj|AK105834.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E10, full insert sequence Length = 1512 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 1162 tcctcttcctccgccgccgccgc 1140
>dbj|AK099856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110K19, full insert sequence Length = 1681 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 1424 tcctcttcctccgccgccgccgc 1402
>dbj|AK067357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099I15, full insert sequence Length = 3919 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 556 tcctcttcctccgccgccgccgc 578
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 389 aggacctcaagaactgggacgcagagttcgtcaag 423 ||||||||||||||| |||||| || ||||||||| Sbjct: 10638413 aggacctcaagaacttggacgccgacttcgtcaag 10638379 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcgc 51 ||||| ||||||||||||||||||| Sbjct: 18606483 tcctcctcctccgccgccgccgcgc 18606507 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 14003949 tcctcctcctccgccgccgccgcg 14003926
>emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072M01, complete sequence Length = 127712 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgcgct 52 |||||||||||||||||||||| |||| Sbjct: 78293 ttcctcttcctccgccgccgccccgct 78267
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgc 49 ||||||||||||||||||||||| Sbjct: 130929 tcctcttcctccgccgccgccgc 130907 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 171619 ccgccgccgccgcgcttcctc 171599
>dbj|AP004928.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01G01, TM0081b, complete sequence Length = 44292 Score = 46.1 bits (23), Expect = 0.096 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 29 ctcttcctccgccgccgccgc-gcttcctca 58 ||||||||||||||||||||| ||||||||| Sbjct: 900 ctcttcctccgccgccgccgctgcttcctca 930
>ref|NM_126370.2| Arabidopsis thaliana ASK16 (ARABIDOPSIS SKP1-LIKE 16); ubiquitin-protein ligase AT2G03190 (ASK16) mRNA, complete cds Length = 688 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccga 233 ||||||||||| |||||||||||||| Sbjct: 109 cacatgatcgatgacgactgcgccga 134
>ref|NM_193015.2| Oryza sativa (japonica cultivar-group), mRNA Length = 846 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaa 254 |||||||||| ||| ||||||||| |||| |||||||||||||| Sbjct: 243 acatgatcgacaacgtctgcgccgatcacgggatcccgctccccaa 288
>gb|AY017824.1| Oryza sativa microsatellite MRG0149 containing (AG)X13, genomic sequence Length = 226 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcgct 52 ||||| |||||||||||||||||||| Sbjct: 150 tcctcctcctccgccgccgccgcgct 125
>gb|BT015726.1| Arabidopsis thaliana At2g03190 gene, complete cds Length = 513 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccga 233 ||||||||||| |||||||||||||| Sbjct: 91 cacatgatcgatgacgactgcgccga 116
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcgct 52 ||||| |||||||||||||||||||| Sbjct: 51251 tcctcctcctccgccgccgccgcgct 51226
>gb|BT015070.1| Arabidopsis thaliana At2g03190 gene, complete cds Length = 625 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccga 233 ||||||||||| |||||||||||||| Sbjct: 105 cacatgatcgatgacgactgcgccga 130
>ref|XM_955698.1| Neurospora crassa OR74A hypothetical protein (NCU08969.1) partial mRNA Length = 1224 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgcc 47 |||||||||||||||||||||| Sbjct: 772 ttcctcttcctccgccgccgcc 751
>ref|XM_331360.1| Neurospora crassa OR74A hypothetical protein (NCU08969.1) partial mRNA Length = 1224 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgcc 47 |||||||||||||||||||||| Sbjct: 772 ttcctcttcctccgccgccgcc 751
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 159 ggagttcgaggtggaggaggcggtcg 184 |||||||| ||||||||||||||||| Sbjct: 193297 ggagttcggggtggaggaggcggtcg 193322
>ref|XM_794074.1| PREDICTED: Strongylocentrotus purpuratus similar to S-phase kinase-associated protein 1A (Cyclin A/CDK2-associated protein p19) (p19A) (p19skp1) (LOC594639), mRNA Length = 423 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 catcccgctccccaacgtcaactcca 265 |||||| ||||||||||||||||||| Sbjct: 93 catccctctccccaacgtcaactcca 118
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgcc 47 |||||||||||||||||||||| Sbjct: 77556 ttcctcttcctccgccgccgcc 77535
>gb|AC005313.3| Arabidopsis thaliana chromosome 2 clone T18E12 map CIC11A04, complete sequence Length = 91318 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 208 cacatgatcgaggacgactgcgccga 233 ||||||||||| |||||||||||||| Sbjct: 49258 cacatgatcgatgacgactgcgccga 49233
>gb|AC020779.10| Homo sapiens chromosome 15, clone RP11-2I17, complete sequence Length = 171123 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 32 ttcctccgccgccgccgcgcttcctc 57 |||| ||||||||||||||||||||| Sbjct: 168246 ttccgccgccgccgccgcgcttcctc 168221
>gb|AC009690.17| Homo sapiens chromosome 15, clone RP11-106M3, complete sequence Length = 184640 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 32 ttcctccgccgccgccgcgcttcctc 57 |||| ||||||||||||||||||||| Sbjct: 15266 ttccgccgccgccgccgcgcttcctc 15241
>emb|BX842093.1|CNS09Y8W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccga 233 ||||||||||| |||||||||||||| Sbjct: 109 cacatgatcgatgacgactgcgccga 134
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgcc 47 |||||||||||||||||||||| Sbjct: 17444 ttcctcttcctccgccgccgcc 17465
>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485D10 Length = 147464 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 cctcttcctccgccgccgccgc 49 |||||||||||||||||||||| Sbjct: 133071 cctcttcctccgccgccgccgc 133092
>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0009J19 Length = 156988 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 cctcttcctccgccgccgccgc 49 |||||||||||||||||||||| Sbjct: 60176 cctcttcctccgccgccgccgc 60197
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgcgcttcc 55 |||||| ||| ||||||||||||||||||| Sbjct: 31414 ttcctcctccgccgccgccgccgcgcttcc 31385
>dbj|AK101453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039P18, full insert sequence Length = 3504 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgcgcttcc 55 |||||| ||| ||||||||||||||||||| Sbjct: 269 ttcctcctccgccgccgccgccgcgcttcc 298
>dbj|AK073278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025L08, full insert sequence Length = 846 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgacaacggcatcccgctccccaa 254 |||||||||| ||| ||||||||| |||| |||||||||||||| Sbjct: 243 acatgatcgacaacgtctgcgccgatcacgggatcccgctccccaa 288
>gb|AY823272.1| Notothenia coriiceps TCP1-beta mRNA, complete cds Length = 1931 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 aggaggcggtcgccatggagtc 194 |||||||||||||||||||||| Sbjct: 1309 aggaggcggtcgccatggagtc 1330
>ref|NM_113081.1| Arabidopsis thaliana ASK10; ubiquitin-protein ligase AT3G21860 (ASK10) mRNA, complete cds Length = 459 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 atcgagtactgcaacaagcac 303 ||||||||||||||||||||| Sbjct: 166 atcgagtactgcaacaagcac 186
>ref|NM_113079.2| Arabidopsis thaliana ASK7; ubiquitin-protein ligase AT3G21840 (ASK7) mRNA, complete cds Length = 709 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 atcgagtactgcaacaagcac 303 ||||||||||||||||||||| Sbjct: 235 atcgagtactgcaacaagcac 255
>ref|NM_113080.1| Arabidopsis thaliana ASK9 (ARABIDOPSIS SKP1-LIKE 9); ubiquitin-protein ligase AT3G21850 (ASK9) mRNA, complete cds Length = 462 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 atcgagtactgcaacaagcac 303 ||||||||||||||||||||| Sbjct: 169 atcgagtactgcaacaagcac 189
>ref|NM_113078.1| Arabidopsis thaliana ASK8; ubiquitin-protein ligase AT3G21830 (ASK8) mRNA, complete cds Length = 459 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 atcgagtactgcaacaagcac 303 ||||||||||||||||||||| Sbjct: 166 atcgagtactgcaacaagcac 186
>gb|AY702980.1| Platynereis dumerilii retinal homeobox (rx) mRNA, partial cds Length = 1001 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 ccggcgagaagaagatgatca 136 ||||||||||||||||||||| Sbjct: 275 ccggcgagaagaagatgatca 295
>ref|XM_550497.1| Oryza sativa (japonica cultivar-group), mRNA Length = 336 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 caagctcatcgagtactgcaacaagcacg 304 |||| ||||||||||||||| |||||||| Sbjct: 39 caagatcatcgagtactgcaccaagcacg 67
>ref|XM_482076.1| Oryza sativa (japonica cultivar-group), mRNA Length = 510 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 207 ccacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 259 ||||||||||||||| |||||| |||| || || | || ||||||||||||| Sbjct: 108 ccacatgatcgaggatgactgcaccgataatggggttcccctccccaacgtca 160
>ref|XM_480992.1| Oryza sativa (japonica cultivar-group), mRNA Length = 498 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ctcttcctccgccgccgccgc 49 ||||||||||||||||||||| Sbjct: 177 ctcttcctccgccgccgccgc 197
>ref|XM_450435.1| Oryza sativa (japonica cultivar-group), mRNA Length = 504 Score = 42.1 bits (21), Expect = 1.5 Identities = 80/99 (80%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 209 acatgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactcca 265 ||||||||||||| ||||||||| ||||||| ||||| ||| |||||||| | || Sbjct: 128 acatgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgccgccg 187 Query: 266 agatcctctccaagctcatcgagtactgcaacaagcacg 304 | |||||| ||| | | ||||||||||||||| ||||| Sbjct: 188 acatcctcgccatggtggtcgagtactgcaacaggcacg 226
>ref|XM_450421.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3899 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 caacggcatcccgctccccaacgtc 258 |||||||||||| |||||||||||| Sbjct: 3330 caacggcatccctctccccaacgtc 3354
>ref|NM_197208.1| Oryza sativa (japonica cultivar-group) putative leaf protein (OSJNBa0078O01.26), mRNA Length = 1542 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcgc 51 ||||| ||||||||||||||||||| Sbjct: 111 tcctcctcctccgccgccgccgcgc 135
>ref|XM_477666.1| Oryza sativa (japonica cultivar-group), mRNA Length = 917 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 gaggacctcaagaactgggac 408 ||||||||||||||||||||| Sbjct: 417 gaggacctcaagaactgggac 437
>gb|AY022702.1| Oryza sativa microsatellite MRG5027 containing (CCG)X8, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ctcttcctccgccgccgccgc 49 ||||||||||||||||||||| Sbjct: 93 ctcttcctccgccgccgccgc 113
>ref|XM_590665.2| PREDICTED: Bos taurus similar to Myb-binding protein 1A (LOC513045), mRNA Length = 5292 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 caagagctcggacggcgagga 161 ||||||||||||||||||||| Sbjct: 2007 caagagctcggacggcgagga 2027
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0094K23, complete sequence Length = 167482 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgcc 47 ||||||||||||||||||||| Sbjct: 82471 tcctcttcctccgccgccgcc 82451
>gb|AF162281.1| Synthetic construct containing Giardia duodenalis beta-tublin (bTUB-1) gene, partial cds Length = 1485 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 ggcgaggagttcgaggtggaggagg 178 |||||||||||||||| |||||||| Sbjct: 1402 ggcgaggagttcgaggaggaggagg 1426
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcgc 51 ||||| ||||||||||||||||||| Sbjct: 99441 tcctcctcctccgccgccgccgcgc 99465
>ref|XM_773685.1| Giardia lamblia ATCC 50803 tubulin beta chain (GLP_82_78422_77079) partial mRNA Length = 1344 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 ggcgaggagttcgaggtggaggagg 178 |||||||||||||||| |||||||| Sbjct: 1297 ggcgaggagttcgaggaggaggagg 1321
>gb|DQ446683.1| Arabidopsis thaliana clone pENTR221-At3g21850 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3g21850) mRNA, complete cds Length = 462 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 atcgagtactgcaacaagcac 303 ||||||||||||||||||||| Sbjct: 169 atcgagtactgcaacaagcac 189
>emb|Y14856.1|AMFAP1 Antirrhinum majus mRNA for fimbriata-associated protein 1, partial Length = 486 Score = 42.1 bits (21), Expect = 1.5 Identities = 72/89 (80%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaag 267 ||||||||||||||||| || ||||| |||| || || ||||| ||||||| | ||| Sbjct: 91 cacatgatcgaggacgattgtgccgataacgttattcccctcccaaacgtcaccggcaaa 150 Query: 268 atcctctccaagctcatcgagtactgcaa 296 |||||||| || | ||||| |||||||| Sbjct: 151 atcctctcgaaagtgatcgaatactgcaa 179
>emb|X06748.1|GLTUBB Giardia lamblia mRNA for beta-tubulin Length = 1359 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 ggcgaggagttcgaggtggaggagg 178 |||||||||||||||| |||||||| Sbjct: 1297 ggcgaggagttcgaggaggaggagg 1321
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 6736 ccgccgccgccgcgcttcctc 6716
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 578 ccgccgccgccgcgcttcctc 558
>gb|DQ056602.1| Arabidopsis thaliana E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3g21860) mRNA, complete cds Length = 459 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 atcgagtactgcaacaagcac 303 ||||||||||||||||||||| Sbjct: 166 atcgagtactgcaacaagcac 186
>gb|DQ056601.1| Arabidopsis thaliana putative E3 ubiquitin ligase SCF complex subunit SKP1/ASK (At3g21830) mRNA, complete cds Length = 459 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 atcgagtactgcaacaagcac 303 ||||||||||||||||||||| Sbjct: 166 atcgagtactgcaacaagcac 186
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ctcttcctccgccgccgccgc 49 ||||||||||||||||||||| Sbjct: 158253 ctcttcctccgccgccgccgc 158273
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 153 cggcgaggagttcgaggtggaggaggcgg 181 |||||||||| |||||| ||||||||||| Sbjct: 501111 cggcgaggaggtcgaggcggaggaggcgg 501139 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 17556140 tcctcctcctccgccgccgccgcg 17556117 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 14948836 ttcctcctcctccgccgccgccgc 14948813 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 14468473 ttcctcctcctccgccgccgccgc 14468450 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tcctccgccgccgccgcgct 52 |||||||||||||||||||| Sbjct: 3852360 tcctccgccgccgccgcgct 3852341 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 1816804 tcctcctcctccgccgccgccgcg 1816781
>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete sequence Length = 198374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tctttttcctcttcctccgcc 41 ||||||||||||||||||||| Sbjct: 165748 tctttttcctcttcctccgcc 165768
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551C06 Length = 149829 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ctcttcctccgccgccgccgc 49 ||||||||||||||||||||| Sbjct: 137793 ctcttcctccgccgccgccgc 137813
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ctcttcctccgccgccgccgc 49 ||||||||||||||||||||| Sbjct: 115539 ctcttcctccgccgccgccgc 115519
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgcc 47 ||||||||||||||||||||| Sbjct: 138864 tcctcttcctccgccgccgcc 138844
>dbj|AP005788.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515A04 Length = 146160 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 234 caacggcatcccgctccccaacgtc 258 |||||||||||| |||||||||||| Sbjct: 101215 caacggcatccctctccccaacgtc 101191
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 49782 ccgccgccgccgcgcttcctc 49802
>dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_B10 Length = 115074 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgcc 47 ||||||||||||||||||||| Sbjct: 23246 tcctcttcctccgccgccgcc 23226
>dbj|AP005260.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0557D09 Length = 135315 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgcc 47 ||||||||||||||||||||| Sbjct: 100721 tcctcttcctccgccgccgcc 100701
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 gaggacctcaagaactgggac 408 ||||||||||||||||||||| Sbjct: 98367 gaggacctcaagaactgggac 98387
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ctcttcctccgccgccgccgc 49 ||||||||||||||||||||| Sbjct: 40723 ctcttcctccgccgccgccgc 40703
>dbj|AB025634.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSD21 Length = 59793 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 atcgagtactgcaacaagcac 303 ||||||||||||||||||||| Sbjct: 56952 atcgagtactgcaacaagcac 56932 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 atcgagtactgcaacaagcac 303 ||||||||||||||||||||| Sbjct: 54264 atcgagtactgcaacaagcac 54244 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 atcgagtactgcaacaagcac 303 ||||||||||||||||||||| Sbjct: 52584 atcgagtactgcaacaagcac 52564 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 atcgagtactgcaacaagcac 303 ||||||||||||||||||||| Sbjct: 50656 atcgagtactgcaacaagcac 50636
>dbj|AK120203.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037L24, full insert sequence Length = 1846 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcgc 51 ||||| ||||||||||||||||||| Sbjct: 177 tcctcctcctccgccgccgccgcgc 201
>dbj|AK111610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100B16, full insert sequence Length = 3899 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 caacggcatcccgctccccaacgtc 258 |||||||||||| |||||||||||| Sbjct: 3330 caacggcatccctctccccaacgtc 3354
>dbj|AK111519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H13, full insert sequence Length = 2619 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 caacggcatcccgctccccaacgtc 258 |||||||||||| |||||||||||| Sbjct: 2179 caacggcatccctctccccaacgtc 2203
>dbj|AK107372.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B05, full insert sequence Length = 1382 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgcc 47 ||||||||||||||||||||| Sbjct: 432 tcctcttcctccgccgccgcc 452
>dbj|AK103426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128L01, full insert sequence Length = 2413 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 153 cggcgaggagttcgaggtggaggaggcgg 181 |||||||||| |||||| ||||||||||| Sbjct: 152 cggcgaggaggtcgaggcggaggaggcgg 124
>dbj|AK102131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085C17, full insert sequence Length = 918 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 gaggacctcaagaactgggac 408 ||||||||||||||||||||| Sbjct: 418 gaggacctcaagaactgggac 438
>dbj|AK065762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042H11, full insert sequence Length = 1876 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ctcttcctccgccgccgccgc 49 ||||||||||||||||||||| Sbjct: 182 ctcttcctccgccgccgccgc 202
>dbj|AK063241.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-G04, full insert sequence Length = 945 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 454 ccgccgccgccgcgcttcctc 434
>dbj|AK062616.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-B03, full insert sequence Length = 787 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 150 ccgccgccgccgcgcttcctc 170
>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete sequence Length = 94903 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 82403 ccgccgccgccgcgcttcctc 82383
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 7599 ccgccgccgccgcgcttcctc 7579
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 153 cggcgaggagttcgaggtggaggaggcgg 181 |||||||||| |||||| ||||||||||| Sbjct: 501111 cggcgaggaggtcgaggcggaggaggcgg 501139 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 17510511 tcctcctcctccgccgccgccgcg 17510488 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 14903119 ttcctcctcctccgccgccgccgc 14903096 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 14422757 ttcctcctcctccgccgccgccgc 14422734 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tcctccgccgccgccgcgct 52 |||||||||||||||||||| Sbjct: 3852334 tcctccgccgccgccgcgct 3852315 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 1816782 tcctcctcctccgccgccgccgcg 1816759
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccgccgccgccgcgcttcctc 57 ||||||||||||||||||||| Sbjct: 131754 ccgccgccgccgcgcttcctc 131734
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 153 cggcgaggagttcgaggtggaggaggcgg 181 |||||||||| |||||| ||||||||||| Sbjct: 45661 cggcgaggaggtcgaggcggaggaggcgg 45633
>ref|NM_126267.1| Arabidopsis thaliana transcription factor AT2G02060 mRNA, complete cds Length = 1881 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tcttcctccgccgccgccgc 49 |||||||||||||||||||| Sbjct: 730 tcttcctccgccgccgccgc 749
>ref|NM_124538.3| Arabidopsis thaliana unknown protein AT5G51590 mRNA, complete cds Length = 1740 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 cttcctccgccgccgccgcg 50 |||||||||||||||||||| Sbjct: 324 cttcctccgccgccgccgcg 343
>ref|NM_129095.2| Arabidopsis thaliana transcription factor AT2G35430 mRNA, complete cds Length = 1023 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tcttcctccgccgccgccgc 49 |||||||||||||||||||| Sbjct: 434 tcttcctccgccgccgccgc 453
>ref|NM_101868.3| Arabidopsis thaliana ASK4; ubiquitin-protein ligase AT1G20140 (ASK4) mRNA, complete cds Length = 752 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccgacaacgg 239 |||||||| ||||||||||| ||||| ||||| Sbjct: 166 cacatgattgaggacgactgtgccgataacgg 197
>ref|NM_129119.1| Arabidopsis thaliana transcription factor AT2G35640 mRNA, complete cds Length = 1023 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 444 ttcctcctcctccgccgccgccgc 467
>gb|BT020232.1| Arabidopsis thaliana At2g35430 gene, complete cds Length = 980 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tcttcctccgccgccgccgc 49 |||||||||||||||||||| Sbjct: 434 tcttcctccgccgccgccgc 453
>ref|XM_483293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2519 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 1440 tcctcctcctccgccgccgccgcg 1417
>ref|XM_482709.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1029 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 168 ttcctcctcctccgccgccgccgc 145
>ref|XM_466365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 558 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tcctccgccgccgccgcgct 52 |||||||||||||||||||| Sbjct: 320 tcctccgccgccgccgcgct 339
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 cggcgaggagttcgaggtggagga 176 |||||||||||||||||| ||||| Sbjct: 5133 cggcgaggagttcgaggtcgagga 5110
>ref|NM_196490.1| Oryza sativa (japonica cultivar-group) contains similarity to glutathione reductase (NADPH) (OSJNBa0032I20.3), mRNA Length = 1665 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 28 tcctcctcctccgccgccgccgcg 51
>ref|NM_192572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3189 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 55 tcctcctcctccgccgccgccgcg 78
>ref|XM_478048.1| Oryza sativa (japonica cultivar-group), mRNA Length = 453 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 314 tcctcctcctccgccgccgccgcg 291
>ref|NM_193414.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1326 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgc 49 ||||||||||||| |||||||||| Sbjct: 755 ttcctcttcctccaccgccgccgc 778
>ref|XM_469574.1| Oryza sativa (japonica cultivar-group), mRNA Length = 735 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||||||| |||||||||||||| Sbjct: 133 tcctcttccgccgccgccgccgcg 156
>ref|NM_193018.1| Oryza sativa (japonica cultivar-group), mRNA Length = 702 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 242 tcccgctccccaacgtcaactccaagatcctc 273 ||||||||||||||||| |||| |||| |||| Sbjct: 359 tcccgctccccaacgtcgactctaagaccctc 390
>ref|XM_525706.1| PREDICTED: Pan troglodytes LOC470324 (LOC470324), mRNA Length = 15741 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 1030 ttcctcctcctccgccgccgccgc 1007
>ref|XM_477103.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2292 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cgccgccgcgcttcctcatc 60 |||||||||||||||||||| Sbjct: 698 cgccgccgcgcttcctcatc 717
>ref|XM_477043.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ggagttcgaggtggaggagg 178 |||||||||||||||||||| Sbjct: 297 ggagttcgaggtggaggagg 316 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ggagttcgaggtggaggagg 178 |||||||||||||||||||| Sbjct: 213 ggagttcgaggtggaggagg 232
>ref|NM_186391.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 387 tcctcctcctccgccgccgccgcg 364
>ref|XM_473527.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2592 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 150 ttcctcctcctccgccgccgccgc 173
>gb|BC085311.1| Mus musculus huntingtin interacting protein 2, mRNA (cDNA clone MGC:103385 IMAGE:30148009), complete cds Length = 971 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcttcctccgccgccgcc 47 |||||||||||||||||||| Sbjct: 82 cctcttcctccgccgccgcc 63
>gb|AC119857.10| Mus musculus chromosome 3, clone RP23-257A18, complete sequence Length = 152106 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ctcccatctttttcctcttc 34 |||||||||||||||||||| Sbjct: 128873 ctcccatctttttcctcttc 128854
>gb|AY648761.1| Danio rerio nucleolin mRNA, complete cds Length = 2672 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tttcctcttcctccgccgcc 44 |||||||||||||||||||| Sbjct: 1606 tttcctcttcctccgccgcc 1587
>ref|XM_594563.2| PREDICTED: Bos taurus similar to gametogenetin-binding protein 1 (LOC516410), mRNA Length = 1485 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tcttcctccgccgccgccgc 49 |||||||||||||||||||| Sbjct: 893 tcttcctccgccgccgccgc 874
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tcccctcgtcgatggcggcc 105 |||||||||||||||||||| Sbjct: 1081181 tcccctcgtcgatggcggcc 1081162
>ref|XM_421373.1| PREDICTED: Gallus gallus similar to hypothetical protein (LOC423465), mRNA Length = 2220 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ttcctccgccgccgccgcgc 51 |||||||||||||||||||| Sbjct: 117 ttcctccgccgccgccgcgc 98
>ref|XM_960303.1| Neurospora crassa OR74A probable alpha-aminoadipate reductase large subunit [MIPS] (NCU03010.1) partial mRNA Length = 3525 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 gaggacctcaagaactggga 407 |||||||||||||||||||| Sbjct: 1873 gaggacctcaagaactggga 1892
>gb|AY183333.1| Lytechinus semituberculatus isolate GC374 Galapagos 4 bindin gene, partial cds Length = 1256 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 catctttttcctcttcctcc 38 |||||||||||||||||||| Sbjct: 1072 catctttttcctcttcctcc 1053
>ref|XM_330196.1| Neurospora crassa OR74A probable alpha-aminoadipate reductase large subunit [MIPS] (NCU03010.1) partial mRNA Length = 3525 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 gaggacctcaagaactggga 407 |||||||||||||||||||| Sbjct: 1873 gaggacctcaagaactggga 1892
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cgagaagaagatgatcacgc 139 |||||||||||||||||||| Sbjct: 1955607 cgagaagaagatgatcacgc 1955588
>ref|NM_016786.2| Mus musculus huntingtin interacting protein 2 (Hip2), mRNA Length = 4795 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcttcctccgccgccgcc 47 |||||||||||||||||||| Sbjct: 147 cctcttcctccgccgccgcc 128
>gb|AC164002.4| Mus musculus chromosome 3, clone RP24-114A9, complete sequence Length = 198340 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctcccatctttttcctcttc 34 |||||||||||||||||||| Sbjct: 136189 ctcccatctttttcctcttc 136208
>gb|AY190958.1| Drosophila virilis clone DVIF01_45_J10 (D1457) genomic sequence Length = 44255 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcgccgacaacggcatcc 244 |||||||||||||||||||| Sbjct: 39287 ctgcgccgacaacggcatcc 39268
>gb|AC136513.2| Mus musculus BAC clone RP23-477N9 from chromosome 5, complete sequence Length = 188517 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctcttcctccgccgccgcc 47 |||||||||||||||||||| Sbjct: 4606 cctcttcctccgccgccgcc 4625
>gb|M91667.2|HUMGMPIPDI Homo sapiens cGMP-inhibited cAMP phosphodiesterase (PDE3A) mRNA, complete cds Length = 3993 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 335 ttcctcctcctccgccgccgccgc 312
>ref|XM_776421.1| PREDICTED: Strongylocentrotus purpuratus similar to Nuclear pore complex protein Nup205 (Nucleoporin Nup205) (205 kDa nucleoporin) (LOC576076), mRNA Length = 6057 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccaagatcctctccaagctc 282 |||||||||||||||||||| Sbjct: 2135 ccaagatcctctccaagctc 2154
>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 1765 ttcctcctcctccgccgccgccgc 1788
>emb|AL389890.1|NCB24P7 Neurospora crassa DNA linkage group I BAC clone B24P7 Length = 77715 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 gaggacctcaagaactggga 407 |||||||||||||||||||| Sbjct: 55528 gaggacctcaagaactggga 55547
>gb|AC129102.5| Homo sapiens 12 BAC RP11-284H19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 59942 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 18391 ttcctcctcctccgccgccgccgc 18368
>gb|AC116021.5| Homo sapiens chromosome 11, clone CTD-2589M5, complete sequence Length = 167757 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ctcccatctttttcctcttcctcc 38 ||||||||| |||||||||||||| Sbjct: 85297 ctcccatctgtttcctcttcctcc 85274
>gb|AE012337.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 245 of 460 of the complete genome Length = 11412 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gacggcgaggagttcgaggt 170 |||||||||||||||||||| Sbjct: 2066 gacggcgaggagttcgaggt 2085
>gb|AY098980.1| Arabidopsis thaliana At1g20140/T20H2_8 mRNA, complete cds Length = 492 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccgacaacgg 239 |||||||| ||||||||||| ||||| ||||| Sbjct: 97 cacatgattgaggacgactgtgccgataacgg 128
>gb|AC006532.5| Arabidopsis thaliana chromosome 2 clone F14H20 map CIC11A04, complete sequence Length = 76976 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tcttcctccgccgccgccgc 49 |||||||||||||||||||| Sbjct: 69660 tcttcctccgccgccgccgc 69679
>gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete sequence Length = 107436 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 60859 ttcctcctcctccgccgccgccgc 60836
>gb|AC005936.3| Arabidopsis thaliana chromosome 2 clone F5O4 map CIC11A04, complete sequence Length = 93212 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tcttcctccgccgccgccgc 49 |||||||||||||||||||| Sbjct: 88159 tcttcctccgccgccgccgc 88140
>gb|AC005314.3| Arabidopsis thaliana chromosome 2 clone T32F12 map ve016, complete sequence Length = 79881 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tcttcctccgccgccgccgc 49 |||||||||||||||||||| Sbjct: 46890 tcttcctccgccgccgccgc 46909
>dbj|AK139564.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020004N20 product:huntingtin interacting protein 2, full insert sequence Length = 1634 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcttcctccgccgccgcc 47 |||||||||||||||||||| Sbjct: 173 cctcttcctccgccgccgcc 154
>dbj|AK166647.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0045H24 product:huntingtin interacting protein 2, full insert sequence Length = 1814 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcttcctccgccgccgcc 47 |||||||||||||||||||| Sbjct: 65 cctcttcctccgccgccgcc 46
>gb|AC032011.15| Homo sapiens chromosome 15, clone RP11-435J9, complete sequence Length = 201200 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ctccccaacgtcaactccaa 266 |||||||||||||||||||| Sbjct: 55749 ctccccaacgtcaactccaa 55768
>dbj|AK162142.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420435N04 product:huntingtin interacting protein 2, full insert sequence Length = 1545 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcttcctccgccgccgcc 47 |||||||||||||||||||| Sbjct: 97 cctcttcctccgccgccgcc 78
>ref|NM_000921.3| Homo sapiens phosphodiesterase 3A, cGMP-inhibited (PDE3A), mRNA Length = 4124 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 328 ttcctcctcctccgccgccgccgc 305
>dbj|AK160728.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010095B19 product:huntingtin interacting protein 2, full insert sequence Length = 971 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcttcctccgccgccgcc 47 |||||||||||||||||||| Sbjct: 116 cctcttcctccgccgccgcc 97
>gb|AY058205.1| Arabidopsis thaliana At1g20140/T20H2_8 mRNA, complete cds Length = 733 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccgacaacgg 239 |||||||| ||||||||||| ||||| ||||| Sbjct: 166 cacatgattgaggacgactgtgccgataacgg 197
>gb|AY224436.1| Oryza sativa (japonica cultivar-group) isolate 21639 PP2A regulatory subunit-like protein mRNA, complete cds Length = 1257 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 80 tcctcctcctccgccgccgccgcg 57
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 gacggcgaggagttcgaggt 170 |||||||||||||||||||| Sbjct: 2213752 gacggcgaggagttcgaggt 2213733
>dbj|AK035371.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530026F20 product:huntingtin interacting protein 2, full insert sequence Length = 1485 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcttcctccgccgccgcc 47 |||||||||||||||||||| Sbjct: 141 cctcttcctccgccgccgcc 122
>gb|AC091394.2|AC091394 Homo sapiens chromosome 5 clone CTD-2231K23, complete sequence Length = 134928 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctccccaacgtcaactccaa 266 |||||||||||||||||||| Sbjct: 39877 ctccccaacgtcaactccaa 39858
>dbj|AK031055.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5832447D15 product:huntingtin interacting protein 2, full insert sequence Length = 3216 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcttcctccgccgccgcc 47 |||||||||||||||||||| Sbjct: 97 cctcttcctccgccgccgcc 78
>dbj|AK018366.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030447B05 product:huntingtin interacting protein 2, full insert sequence Length = 1601 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcttcctccgccgccgcc 47 |||||||||||||||||||| Sbjct: 130 cctcttcctccgccgccgcc 111
>dbj|AK048194.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130040A15 product:huntingtin interacting protein 2, full insert sequence Length = 4795 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcttcctccgccgccgcc 47 |||||||||||||||||||| Sbjct: 147 cctcttcctccgccgccgcc 128
>emb|BX817718.1|CNS0AE5H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 716 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccgacaacgg 239 |||||||| ||||||||||| ||||| ||||| Sbjct: 131 cacatgattgaggacgactgtgccgataacgg 162
>emb|BX818214.1|CNS0AB2X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZG04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 733 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 208 cacatgatcgaggacgactgcgccgacaacgg 239 |||||||| ||||||||||| ||||| ||||| Sbjct: 147 cacatgattgaggacgactgtgccgataacgg 178
>emb|BX821089.1|CNS0A84R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL13ZH06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1031 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tcttcctccgccgccgccgc 49 |||||||||||||||||||| Sbjct: 434 tcttcctccgccgccgccgc 453
>emb|BX830336.1|CNS0A1GL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZC06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1699 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 cttcctccgccgccgccgcg 50 |||||||||||||||||||| Sbjct: 324 cttcctccgccgccgccgcg 343
>ref|NM_001003839.1| Danio rerio nucleolin (ncl), mRNA Length = 2672 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tttcctcttcctccgccgcc 44 |||||||||||||||||||| Sbjct: 1606 tttcctcttcctccgccgcc 1587
>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0066C06 Length = 162304 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 ||||||||||||| |||||||||| Sbjct: 45511 ttcctcttcctccaccgccgccgc 45488
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttcctcttcctccgccgccgccgc 49 ||||||||||||| |||||||||| Sbjct: 164529 ttcctcttcctccaccgccgccgc 164506
>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 75404 tcctcctcctccgccgccgccgcg 75381
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence Length = 147344 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||||||| |||||||||||||| Sbjct: 116832 tcctcttccgccgccgccgccgcg 116809
>gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thaliana chromosome 1, complete sequence Length = 92710 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 208 cacatgatcgaggacgactgcgccgacaacgg 239 |||||||| ||||||||||| ||||| ||||| Sbjct: 25410 cacatgattgaggacgactgtgccgataacgg 25379
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 29332 ttcctcctcctccgccgccgccgc 29355
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tcttcctccgccgccgccgc 49 |||||||||||||||||||| Sbjct: 142184 tcttcctccgccgccgccgc 142165
>dbj|AP004347.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0675B10 Length = 136229 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 54495 tcctcctcctccgccgccgccgcg 54518
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 150596 tcctcctcctccgccgccgccgcg 150573
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cgccgccgcgcttcctcatc 60 |||||||||||||||||||| Sbjct: 67232 cgccgccgcgcttcctcatc 67213
>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0081K20 Length = 117287 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ggagttcgaggtggaggagg 178 |||||||||||||||||||| Sbjct: 74108 ggagttcgaggtggaggagg 74089 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ggagttcgaggtggaggagg 178 |||||||||||||||||||| Sbjct: 74024 ggagttcgaggtggaggagg 74005
>dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1103_E04 Length = 111354 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 95308 tcctcctcctccgccgccgccgcg 95331
>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689H05 Length = 135803 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tcctccgccgccgccgcgct 52 |||||||||||||||||||| Sbjct: 123292 tcctccgccgccgccgcgct 123311
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 11836 tcctcctcctccgccgccgccgcg 11813
>dbj|AB018109.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K17N15 Length = 81293 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cttcctccgccgccgccgcg 50 |||||||||||||||||||| Sbjct: 57365 cttcctccgccgccgccgcg 57346
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 95043 tcctcctcctccgccgccgccgcg 95066
>dbj|AK120944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N02, full insert sequence Length = 2827 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cgccgccgcgcttcctcatc 60 |||||||||||||||||||| Sbjct: 928 cgccgccgcgcttcctcatc 947
>dbj|AK106450.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E11, full insert sequence Length = 1451 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||||||| |||||||||||||| Sbjct: 613 tcctcttccgccgccgccgccgcg 636
>dbj|AK104881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H01, full insert sequence Length = 1888 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 7 ttcctcctcctccgccgccgccgc 30
>dbj|AK101254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032F20, full insert sequence Length = 2519 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tcctcttcctccgccgccgccgcg 50 ||||| |||||||||||||||||| Sbjct: 1440 tcctcctcctccgccgccgccgcg 1417
>dbj|AK071511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096P04, full insert sequence Length = 824 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ttcctcttcctccgccgccgccgc 49 |||||| ||||||||||||||||| Sbjct: 530 ttcctcctcctccgccgccgccgc 553 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,513,465 Number of Sequences: 3902068 Number of extensions: 3513465 Number of successful extensions: 117719 Number of sequences better than 10.0: 276 Number of HSP's better than 10.0 without gapping: 302 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 109454 Number of HSP's gapped (non-prelim): 8207 length of query: 439 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 417 effective length of database: 17,147,199,772 effective search space: 7150382304924 effective search space used: 7150382304924 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
