ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast42f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 82 6e-16
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 69 7e-12
3APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 51 2e-06
4APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 44 2e-04
5LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 35 0.088
6HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecith... 35 0.11
7LATS2_HUMAN (Q9NRM7) Serine/threonine-protein kinase LATS2 (EC 2... 32 0.97
8IF2_SYMTH (Q67P86) Translation initiation factor IF-2 29 4.8
9IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27) 29 6.3
10S230_PLAFO (P68875) Transmission-blocking target antigen S230 pr... 28 8.2
11S230_PLAF7 (P68874) Transmission-blocking target antigen S230 pr... 28 8.2

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 82.0 bits (201), Expect = 6e-16
 Identities = 43/93 (46%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
 Frame = +3

Query: 174 NYTSMFSFGDSLTDTGNLLVSS-PLSFNIVGRFPYGMTYFHRPTGRCSDGRLVVDFLAQA 350
           ++ ++F+FGDS +DTG    +  PL+       PYG T+FHR TGR SDGRL++DF+A++
Sbjct: 31  DFPAIFNFGDSNSDTGGKAAAFYPLNP------PYGETFFHRSTGRYSDGRLIIDFIAES 84

Query: 351 FGLPLLQPYLSR-GKDVRQGVNFAVGGATAMDP 446
           F LP L PYLS  G + + G +FA  G+T   P
Sbjct: 85  FNLPYLSPYLSSLGSNFKHGADFATAGSTIKLP 117



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +3

Query: 174 NYTSMFSFGDSLTDTGNLLVSSPLSFNIVGRFPYGMTYFHRPTGRCSDGRLVVDFLAQAF 353
           ++ ++F+FGDS +DTG L  +    F   G  P+G ++F  P GR  DGRLV+DF+A++ 
Sbjct: 27  HFPAIFNFGDSNSDTGGLSAA----FGQAGP-PHGSSFFGSPAGRYCDGRLVIDFIAESL 81

Query: 354 GLPLLQPYL-SRGKDVRQGVNFAVGGA 431
           GLP L  +L S G +   G NFA  G+
Sbjct: 82  GLPYLSAFLDSVGSNFSHGANFATAGS 108



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
 Frame = +3

Query: 183 SMFSFGDSLTDTGNLLVSSPLSFNIVGRF-PYGMTY-FHRPTGRCSDGRLVVDFLAQAFG 356
           ++F FGDS+ DTGN   ++ L   I   + PYGM + F   TGR S+G +  D+LA+  G
Sbjct: 204 AVFFFGDSVFDTGN---NNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMG 260

Query: 357 LPLLQP-YLS---RGKDVRQGVNFAVGGA 431
           +  + P YL    +  D+  GV+FA GGA
Sbjct: 261 VKEIVPAYLDPKIQPNDLLTGVSFASGGA 289



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
 Frame = +3

Query: 171 QNYT--SMFSFGDSLTDTGNLLVSSPLSFNIVGRF-PYGMTY-FHRPTGRCSDGRLVVDF 338
           QN T  ++F FGDS+ DTGN   ++ L   +   + PYGM +     TGR S+GR+  D+
Sbjct: 119 QNKTIPAVFFFGDSIFDTGN---NNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDY 175

Query: 339 LAQAFGLPLLQP-YLSR---------GKDVRQGVNFAVGGA 431
           +++  G+  + P Y+ +           D+  GV+FA GGA
Sbjct: 176 ISKYLGVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGA 216



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>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 645

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 26/88 (29%), Positives = 40/88 (45%)
 Frame = +3

Query: 177 YTSMFSFGDSLTDTGNLLVSSPLSFNIVGRFPYGMTYFHRPTGRCSDGRLVVDFLAQAFG 356
           Y +++ FGDSL+D GN            GR+              ++ +L  DF+AQ  G
Sbjct: 25  YNNLYVFGDSLSDGGNN-----------GRYTVDGI-------NGTESKLYNDFIAQQLG 66

Query: 357 LPLLQPYLSRGKDVRQGVNFAVGGATAM 440
           + L+          + G N+A GGATA+
Sbjct: 67  IELVN-------SKKGGTNYAAGGATAV 87



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>HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecithin-dependent|
           haemolysin) (LDH) (Atypical phospholipase)
           (Phospholipase A2) (Lysophospholipase)
          Length = 418

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 27/80 (33%), Positives = 40/80 (50%)
 Frame = +3

Query: 192 SFGDSLTDTGNLLVSSPLSFNIVGRFPYGMTYFHRPTGRCSDGRLVVDFLAQAFGLPLLQ 371
           + GDSL+DTGN+  +S        RFP   ++F    G  S+G +  +++A+A  LPL  
Sbjct: 149 ALGDSLSDTGNIFNASQ------WRFPNPNSWF---LGHFSNGFVWTEYIAKAKNLPL-- 197

Query: 372 PYLSRGKDVRQGVNFAVGGA 431
                        N+AVGGA
Sbjct: 198 ------------YNWAVGGA 205



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>LATS2_HUMAN (Q9NRM7) Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 2) (Serine/threonine-protein
           kinase kpm) (Kinase phosphorylated during mitosis
           protein) (Warts-like kinase)
          Length = 1088

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -3

Query: 430 APPTAKLTPCRTSLPRDRYGCSSGSPNACARKSTTRRPSEQRP 302
           +PP + LTP R SL  D Y  SS S       +  RR S Q+P
Sbjct: 342 SPPQSLLTPSRNSLNVDLYELSSTSVQQWPAATLARRDSLQKP 384



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>IF2_SYMTH (Q67P86) Translation initiation factor IF-2|
          Length = 1044

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -3

Query: 451 KGGSMAVAP-PTAKLTPCRTSLPRDRYGCSSGSPNACARKSTTRRPSEQRPVGRWK*VMP 275
           K    A  P PT +  P +TSL  D +G  +      + K   R  +E+RP+   +   P
Sbjct: 68  KSAKPAAQPKPTREANPAKTSLLEDFFGSGTRPQRPLSEKRERRPLTERRPLAERR---P 124

Query: 274 YGKRP 260
             +RP
Sbjct: 125 LAERP 129



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>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)|
          Length = 512

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 29/107 (27%), Positives = 39/107 (36%), Gaps = 11/107 (10%)
 Frame = -3

Query: 448 GGSMA-VAPPTAKLTPCRTSLPRDRYGCSSGSPNACARKS--------TTRRPSEQRPVG 296
           GG +A + PP  K  P R      R G   G P A    S        T R P   RP  
Sbjct: 121 GGKVARLQPPPTKAQPARGGRRGRRRGRGRGGPGAADGLSDPRRRAPRTNRNPGGPRPGA 180

Query: 295 RWK--*VMPYGKRPTMLKESGLDTSRLPVSVRESPKLNMEV*FCPPP 161
            W      P+G+     ++      +    VR++P   M +   PPP
Sbjct: 181 GWTDGPGAPHGEAWRGSEQPDPPGGQRTRGVRQAPPPLMTLAIAPPP 227



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>S230_PLAFO (P68875) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 290 EVGHAVREAADDVEGERAGHEQVAGVGQGVAE 195
           EVG  V E   +  GE  G E+   VG+GV E
Sbjct: 396 EVGEEVGEEVGEEVGEEVGEEEGEEVGEGVGE 427



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>S230_PLAF7 (P68874) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 290 EVGHAVREAADDVEGERAGHEQVAGVGQGVAE 195
           EVG  V E   +  GE  G E+   VG+GV E
Sbjct: 396 EVGEEVGEEVGEEVGEEVGEEEGEEVGEGVGE 427


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,354,677
Number of Sequences: 219361
Number of extensions: 729399
Number of successful extensions: 2573
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2569
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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