>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 3)
          Length = 437

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 10/45 (22%)
 Frame = +3

Query: 294 HPHRHL---QPRHQGRIR-------GRVAGDRQAHLRQAHPPARR 398
           HP R     QPRH GR R       GR  G  + HLRQA  PA R
Sbjct: 153 HPRRQRLREQPRHAGRPRRRQPPRRGRSRGTHRRHLRQAPRPAVR 197

>TER_EUGGR (Q5EU90) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC|
           1.3.1.44)
          Length = 539

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 4   SPTPAAA*QRREGVRPAMATIVNTTEEEPMLAVVRS-IAQQTWADAGPEVADPEVA 168
           SPT       R  +RP  A  + T  E P +A   S  A   WA AGP+ A P VA
Sbjct: 42  SPTSLVRGVDRGLMRPTTAAALTTMREVPQMAEGFSGEATSAWAAAGPQWAAPLVA 97

>CSPG2_BOVIN (P81282) Versican core protein precursor (Large fibroblast|
           proteoglycan) (Chondroitin sulfate proteoglycan core
           protein 2) (PG-M) (Glial hyaluronate-binding protein)
           (GHAP)
          Length = 3381

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 4   SPTPAAA*QRREGVRPAMATIVNTTEE 84
           SPTP    +R E +RPAM T+  T +E
Sbjct: 674 SPTPRTGRERTETLRPAMRTVTYTNDE 700

>TNK1_MOUSE (Q99ML2) Non-receptor tyrosine-protein kinase TNK1 (EC 2.7.10.2)|
           (Kinase of embryonic stem cells)
          Length = 666

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +3

Query: 294 HPHRHLQPRHQGRIRGRVAGDRQAHLRQAHPPAR 395
           HP     P H  + RG   GDR+    Q  PPAR
Sbjct: 448 HPAHRGSPAHGEKCRGGTDGDREKATLQDLPPAR 481

>DHPS_SHIFL (P0AC15) Dihydropteroate synthase (EC 2.5.1.15) (DHPS)|
           (Dihydropteroate pyrophosphorylase)
          Length = 282

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 37  EGVRPAMATIVNTTEEEPMLAVVRSIAQQTWADAGPEVADPEVARLCAEAQQHVL 201
           E  RP  A +    E + ++ VV +IAQ+       + + PEV R  A+   H++
Sbjct: 60  ESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHII 114

>DHPS_ECOLI (P0AC13) Dihydropteroate synthase (EC 2.5.1.15) (DHPS)|
           (Dihydropteroate pyrophosphorylase)
          Length = 282

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 37  EGVRPAMATIVNTTEEEPMLAVVRSIAQQTWADAGPEVADPEVARLCAEAQQHVL 201
           E  RP  A +    E + ++ VV +IAQ+       + + PEV R  A+   H++
Sbjct: 60  ESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHII 114

>DHPS_ECOL6 (P0AC14) Dihydropteroate synthase (EC 2.5.1.15) (DHPS)|
           (Dihydropteroate pyrophosphorylase)
          Length = 282

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 37  EGVRPAMATIVNTTEEEPMLAVVRSIAQQTWADAGPEVADPEVARLCAEAQQHVL 201
           E  RP  A +    E + ++ VV +IAQ+       + + PEV R  A+   H++
Sbjct: 60  ESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHII 114


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,104,894
Number of Sequences: 219361
Number of extensions: 468726
Number of successful extensions: 1830
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)