| Clone Name | bast42e09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470959.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 353 bits (178), Expect = 3e-94 Identities = 303/345 (87%), Gaps = 6/345 (1%) Strand = Plus / Plus Query: 55 atggcgacgatcgtgaacacgacggaggaggagccgatgctggcggtggtgcgctccatc 114 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || | Sbjct: 1 atggcgacgatcgtgaacacgacggaggaggagccgatgctggccgtggtgcgcttcacc 60 Query: 115 gcgcagcagacctgggccgacgccggccccgaggtcgccgacccggaggtggcccgcctc 174 || ||| | ||||||| ||||||||| |||| |||||||| |||||||| |||| ||| Sbjct: 61 gccgagctggcctgggcggacgccggcgccgacgtcgccgagccggaggtcacccgtctc 120 Query: 175 tgcgccgaggcgcagcagcacgtcctcgccggccgctggctcgacatggccgccctcatg 234 |||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| Sbjct: 121 tgcgtcgaggcgcagcagcacatcctcgccgcccgctggctcgacatggcctccctcatg 180 Query: 235 ctcgcctccgccgacctcctcctcctctccccccgcgtcccc------gacaaagagctc 288 ||||||||||||||||||||||||| ||| | ||| ||||| |||||||| ||| Sbjct: 181 ctcgcctccgccgacctcctcctccaatccacgcgcctccccgacaaggacaaagatctc 240 Query: 289 gagtgcatcctcaccgtcatctgcaacctcgtcaccaaggccggatccgaggacgagtcg 348 |||||||||||| | |||||||||||||||||||||||||| ||||| | |||||| | Sbjct: 241 gagtgcatcctcgctatcatctgcaacctcgtcaccaaggcccgatcccaagacgaggcc 300 Query: 349 ctggagatcgccaggctcatctgcgccaagctcacccaccagccc 393 ||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 301 ctgcagatcgccgaactcatctgcgccaagctcacccaccagccc 345
>dbj|AK066032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046D12, full insert sequence Length = 1702 Score = 353 bits (178), Expect = 3e-94 Identities = 303/345 (87%), Gaps = 6/345 (1%) Strand = Plus / Plus Query: 55 atggcgacgatcgtgaacacgacggaggaggagccgatgctggcggtggtgcgctccatc 114 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || | Sbjct: 90 atggcgacgatcgtgaacacgacggaggaggagccgatgctggccgtggtgcgcttcacc 149 Query: 115 gcgcagcagacctgggccgacgccggccccgaggtcgccgacccggaggtggcccgcctc 174 || ||| | ||||||| ||||||||| |||| |||||||| |||||||| |||| ||| Sbjct: 150 gccgagctggcctgggcggacgccggcgccgacgtcgccgagccggaggtcacccgtctc 209 Query: 175 tgcgccgaggcgcagcagcacgtcctcgccggccgctggctcgacatggccgccctcatg 234 |||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| Sbjct: 210 tgcgtcgaggcgcagcagcacatcctcgccgcccgctggctcgacatggcctccctcatg 269 Query: 235 ctcgcctccgccgacctcctcctcctctccccccgcgtcccc------gacaaagagctc 288 ||||||||||||||||||||||||| ||| | ||| ||||| |||||||| ||| Sbjct: 270 ctcgcctccgccgacctcctcctccaatccacgcgcctccccgacaaggacaaagatctc 329 Query: 289 gagtgcatcctcaccgtcatctgcaacctcgtcaccaaggccggatccgaggacgagtcg 348 |||||||||||| | |||||||||||||||||||||||||| ||||| | |||||| | Sbjct: 330 gagtgcatcctcgctatcatctgcaacctcgtcaccaaggcccgatcccaagacgaggcc 389 Query: 349 ctggagatcgccaggctcatctgcgccaagctcacccaccagccc 393 ||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 390 ctgcagatcgccgaactcatctgcgccaagctcacccaccagccc 434
>dbj|AK060850.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E07, full insert sequence Length = 1650 Score = 353 bits (178), Expect = 3e-94 Identities = 303/345 (87%), Gaps = 6/345 (1%) Strand = Plus / Plus Query: 55 atggcgacgatcgtgaacacgacggaggaggagccgatgctggcggtggtgcgctccatc 114 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || | Sbjct: 52 atggcgacgatcgtgaacacgacggaggaggagccgatgctggccgtggtgcgcttcacc 111 Query: 115 gcgcagcagacctgggccgacgccggccccgaggtcgccgacccggaggtggcccgcctc 174 || ||| | ||||||| ||||||||| |||| |||||||| |||||||| |||| ||| Sbjct: 112 gccgagctggcctgggcggacgccggcgccgacgtcgccgagccggaggtcacccgtctc 171 Query: 175 tgcgccgaggcgcagcagcacgtcctcgccggccgctggctcgacatggccgccctcatg 234 |||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| Sbjct: 172 tgcgtcgaggcgcagcagcacatcctcgccgcccgctggctcgacatggcctccctcatg 231 Query: 235 ctcgcctccgccgacctcctcctcctctccccccgcgtcccc------gacaaagagctc 288 ||||||||||||||||||||||||| ||| | ||| ||||| |||||||| ||| Sbjct: 232 ctcgcctccgccgacctcctcctccaatccacgcgcctccccgacaaggacaaagatctc 291 Query: 289 gagtgcatcctcaccgtcatctgcaacctcgtcaccaaggccggatccgaggacgagtcg 348 |||||||||||| | |||||||||||||||||||||||||| ||||| | |||||| | Sbjct: 292 gagtgcatcctcgctatcatctgcaacctcgtcaccaaggcccgatcccaagacgaggcc 351 Query: 349 ctggagatcgccaggctcatctgcgccaagctcacccaccagccc 393 ||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 352 ctgcagatcgccgaactcatctgcgccaagctcacccaccagccc 396
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15, complete sequence Length = 144778 Score = 268 bits (135), Expect = 1e-68 Identities = 204/227 (89%) Strand = Plus / Minus Query: 55 atggcgacgatcgtgaacacgacggaggaggagccgatgctggcggtggtgcgctccatc 114 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || | Sbjct: 9090 atggcgacgatcgtgaacacgacggaggaggagccgatgctggccgtggtgcgcttcacc 9031 Query: 115 gcgcagcagacctgggccgacgccggccccgaggtcgccgacccggaggtggcccgcctc 174 || ||| | ||||||| ||||||||| |||| |||||||| |||||||| |||| ||| Sbjct: 9030 gccgagctggcctgggcggacgccggcgccgacgtcgccgagccggaggtcacccgtctc 8971 Query: 175 tgcgccgaggcgcagcagcacgtcctcgccggccgctggctcgacatggccgccctcatg 234 |||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| Sbjct: 8970 tgcgtcgaggcgcagcagcacatcctcgccgcccgctggctcgacatggcctccctcatg 8911 Query: 235 ctcgcctccgccgacctcctcctcctctccccccgcgtccccgacaa 281 ||||||||||||||||||||||||| ||| | ||| |||||||||| Sbjct: 8910 ctcgcctccgccgacctcctcctccaatccacgcgcctccccgacaa 8864 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Minus Query: 286 ctcgagtgcatcctcaccgtcatctgcaacctcgtcaccaaggccggatccgaggacgag 345 ||||||||||||||| | |||||||||||||||||||||||||| ||||| | |||||| Sbjct: 8775 ctcgagtgcatcctcgctatcatctgcaacctcgtcaccaaggcccgatcccaagacgag 8716 Query: 346 tcgctggagatcgccaggctcatctgcgccaagctcacccaccagccc 393 | ||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 8715 gccctgcagatcgccgaactcatctgcgccaagctcacccaccagccc 8668
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 268 bits (135), Expect = 1e-68 Identities = 204/227 (89%) Strand = Plus / Minus Query: 55 atggcgacgatcgtgaacacgacggaggaggagccgatgctggcggtggtgcgctccatc 114 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || | Sbjct: 213270 atggcgacgatcgtgaacacgacggaggaggagccgatgctggccgtggtgcgcttcacc 213211 Query: 115 gcgcagcagacctgggccgacgccggccccgaggtcgccgacccggaggtggcccgcctc 174 || ||| | ||||||| ||||||||| |||| |||||||| |||||||| |||| ||| Sbjct: 213210 gccgagctggcctgggcggacgccggcgccgacgtcgccgagccggaggtcacccgtctc 213151 Query: 175 tgcgccgaggcgcagcagcacgtcctcgccggccgctggctcgacatggccgccctcatg 234 |||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| Sbjct: 213150 tgcgtcgaggcgcagcagcacatcctcgccgcccgctggctcgacatggcctccctcatg 213091 Query: 235 ctcgcctccgccgacctcctcctcctctccccccgcgtccccgacaa 281 ||||||||||||||||||||||||| ||| | ||| |||||||||| Sbjct: 213090 ctcgcctccgccgacctcctcctccaatccacgcgcctccccgacaa 213044 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Minus Query: 286 ctcgagtgcatcctcaccgtcatctgcaacctcgtcaccaaggccggatccgaggacgag 345 ||||||||||||||| | |||||||||||||||||||||||||| ||||| | |||||| Sbjct: 212955 ctcgagtgcatcctcgctatcatctgcaacctcgtcaccaaggcccgatcccaagacgag 212896 Query: 346 tcgctggagatcgccaggctcatctgcgccaagctcacccaccagccc 393 | ||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 212895 gccctgcagatcgccgaactcatctgcgccaagctcacccaccagccc 212848 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 22916813 ccgacctcctcctcctctcc 22916794 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccccgcg 271 |||||||||||||||||| ||||| Sbjct: 10758761 acctcctcctcctctcccaccgcg 10758738
>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06, complete sequence Length = 145517 Score = 268 bits (135), Expect = 1e-68 Identities = 204/227 (89%) Strand = Plus / Minus Query: 55 atggcgacgatcgtgaacacgacggaggaggagccgatgctggcggtggtgcgctccatc 114 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || | Sbjct: 144557 atggcgacgatcgtgaacacgacggaggaggagccgatgctggccgtggtgcgcttcacc 144498 Query: 115 gcgcagcagacctgggccgacgccggccccgaggtcgccgacccggaggtggcccgcctc 174 || ||| | ||||||| ||||||||| |||| |||||||| |||||||| |||| ||| Sbjct: 144497 gccgagctggcctgggcggacgccggcgccgacgtcgccgagccggaggtcacccgtctc 144438 Query: 175 tgcgccgaggcgcagcagcacgtcctcgccggccgctggctcgacatggccgccctcatg 234 |||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| Sbjct: 144437 tgcgtcgaggcgcagcagcacatcctcgccgcccgctggctcgacatggcctccctcatg 144378 Query: 235 ctcgcctccgccgacctcctcctcctctccccccgcgtccccgacaa 281 ||||||||||||||||||||||||| ||| | ||| |||||||||| Sbjct: 144377 ctcgcctccgccgacctcctcctccaatccacgcgcctccccgacaa 144331 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Minus Query: 286 ctcgagtgcatcctcaccgtcatctgcaacctcgtcaccaaggccggatccgaggacgag 345 ||||||||||||||| | |||||||||||||||||||||||||| ||||| | |||||| Sbjct: 144242 ctcgagtgcatcctcgctatcatctgcaacctcgtcaccaaggcccgatcccaagacgag 144183 Query: 346 tcgctggagatcgccaggctcatctgcgccaagctcacccaccagccc 393 | ||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 144182 gccctgcagatcgccgaactcatctgcgccaagctcacccaccagccc 144135
>gb|BT018659.1| Zea mays clone EL01N0508G06.d mRNA sequence Length = 1595 Score = 264 bits (133), Expect = 2e-67 Identities = 285/335 (85%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 55 atggcgacgatcgtgaacacgacggaggaggagccgatgctggcggtggtgcgctccatc 114 |||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||| || | Sbjct: 124 atggcgaccatcgtaaacacgacggaggaggagccgatgctggccgtggtccgcttcacc 183 Query: 115 gcgcagcagacctgggccgacgccggccccgaggtcgccgacccggaggtggcccgcctc 174 || ||| ||||||||||||| ||||| |||||||||||||| ||||| ||||||| Sbjct: 184 gctgagctcgcctgggccgacgcgggcccggaggtcgccgaccccgaggtcacccgccta 243 Query: 175 tgcgccgaggcgcagcagcacgtcctcgccggccgctggctcgacatggccgccctcatg 234 || |||||||||| |||| ||||||| || || ||||||||||||||| |||| ||| Sbjct: 244 tgtctcgaggcgcaggagcatatcctcgcggggcggtggctcgacatggcctcccttatg 303 Query: 235 ctcgcctccgccgacctcctcctcctctccc---cccgcgtccccgacaaagagctcgag 291 |||||||||||||||||||||||| ||||| | |||||| | |||||||| || ||| Sbjct: 304 ctcgcctccgccgacctcctcctcacctccccgtcgcgcgtctcggacaaagacctggag 363 Query: 292 tgcatcctcaccgtcatctgcaacctcgtcaccaaggccggatccgaggacgagtcgctg 351 ||| | ||| |||||||||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 364 tgcgttctctccgtcatctgcagcctcgtcaccaaggccggatccgaggaccaggcgctg 423 Query: 352 gagatcgccaggctcatctgcgccaagctcaccca 386 ||||| || ||||||||||| ||||||||||| Sbjct: 424 cagatcaccgaactcatctgcgctaagctcaccca 458
>gb|AY104398.1| Zea mays PCO096110 mRNA sequence Length = 1724 Score = 264 bits (133), Expect = 2e-67 Identities = 285/335 (85%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 55 atggcgacgatcgtgaacacgacggaggaggagccgatgctggcggtggtgcgctccatc 114 |||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||| || | Sbjct: 175 atggcgaccatcgtaaacacgacggaggaggagccgatgctggccgtggtccgcttcacc 234 Query: 115 gcgcagcagacctgggccgacgccggccccgaggtcgccgacccggaggtggcccgcctc 174 || ||| ||||||||||||| ||||| |||||||||||||| ||||| ||||||| Sbjct: 235 gctgagctcgcctgggccgacgcgggcccggaggtcgccgaccccgaggtcacccgccta 294 Query: 175 tgcgccgaggcgcagcagcacgtcctcgccggccgctggctcgacatggccgccctcatg 234 || |||||||||| |||| ||||||| || || ||||||||||||||| |||| ||| Sbjct: 295 tgtctcgaggcgcaggagcatatcctcgcggggcggtggctcgacatggcctcccttatg 354 Query: 235 ctcgcctccgccgacctcctcctcctctccc---cccgcgtccccgacaaagagctcgag 291 |||||||||||||||||||||||| ||||| | |||||| | |||||||| || ||| Sbjct: 355 ctcgcctccgccgacctcctcctcacctccccgtcgcgcgtctcggacaaagacctggag 414 Query: 292 tgcatcctcaccgtcatctgcaacctcgtcaccaaggccggatccgaggacgagtcgctg 351 ||| | ||| |||||||||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 415 tgcgttctctccgtcatctgcagcctcgtcaccaaggccggatccgaggaccaggcgctg 474 Query: 352 gagatcgccaggctcatctgcgccaagctcaccca 386 ||||| || ||||||||||| ||||||||||| Sbjct: 475 cagatcaccgaactcatctgcgctaagctcaccca 509
>gb|AC164294.2| Mus musculus BAC clone RP24-556J13 from chromosome 14, complete sequence Length = 143851 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 246 cgacctcctcctcctctcccccc 268 ||||||||||||||||||||||| Sbjct: 30059 cgacctcctcctcctctcccccc 30081
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctccccccgcg 271 ||||||||||||||||||||||| Sbjct: 494865 cctcctcctcctctccccccgcg 494887
>gb|AC121791.3| Mus musculus BAC clone RP23-401H19 from chromosome 14, complete sequence Length = 197720 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 246 cgacctcctcctcctctcccccc 268 ||||||||||||||||||||||| Sbjct: 59146 cgacctcctcctcctctcccccc 59124
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.37 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 221 tggccgccctcatgctcgcctccgccgacctcctcctc 258 |||||||||||||| ||||||||||| |||||||||| Sbjct: 26276646 tggccgccctcatgtccgcctccgccg-cctcctcctc 26276610 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 249 cctcctcctcctctccccccgcgtc 273 |||||||||||||||||||| |||| Sbjct: 7855579 cctcctcctcctctcccccctcgtc 7855555
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 44.1 bits (22), Expect = 0.37 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 221 tggccgccctcatgctcgcctccgccgacctcctcctc 258 |||||||||||||| ||||||||||| |||||||||| Sbjct: 141186 tggccgccctcatgtccgcctccgccg-cctcctcctc 141150
>dbj|AK107748.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H06, full insert sequence Length = 512 Score = 44.1 bits (22), Expect = 0.37 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 221 tggccgccctcatgctcgcctccgccgacctcctcctc 258 |||||||||||||| ||||||||||| |||||||||| Sbjct: 246 tggccgccctcatgtccgcctccgccg-cctcctcctc 210
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 ctggcggtggtgcgctccatcg 115 |||||||||||||||||||||| Sbjct: 3513435 ctggcggtggtgcgctccatcg 3513414
>ref|XM_481420.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2208 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 242 ccgccgacctcctcctcctctccccccgcgtcc 274 |||||||||||| || |||||||| |||||||| Sbjct: 62 ccgccgacctccgccgcctctcccaccgcgtcc 94
>ref|XM_467138.1| Oryza sativa (japonica cultivar-group), mRNA Length = 703 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 gccgccctcatgctcgcctccgccg 247 ||||||||| ||||||||||||||| Sbjct: 408 gccgccctcctgctcgcctccgccg 384
>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16, complete sequence Length = 164501 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 242 ccgccgacctcctcctcctctccccccgcgtcc 274 |||||||||||| || |||||||| |||||||| Sbjct: 43949 ccgccgacctccgccgcctctcccaccgcgtcc 43981
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19, complete sequence Length = 158749 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 242 ccgccgacctcctcctcctctccccccgcgtcc 274 |||||||||||| || |||||||| |||||||| Sbjct: 19298 ccgccgacctccgccgcctctcccaccgcgtcc 19266
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 345 gtcgctggagatcgccaggctcatc 369 ||||| ||||||||||||||||||| Sbjct: 3972833 gtcgcgggagatcgccaggctcatc 3972809
>gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosome 9, complete sequence Length = 198803 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 acctcctcctcctctcccccc 268 ||||||||||||||||||||| Sbjct: 53439 acctcctcctcctctcccccc 53459
>gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome Length = 221454 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 tcctcctcctctccccccgcg 271 ||||||||||||||||||||| Sbjct: 106408 tcctcctcctctccccccgcg 106388
>gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, complete genome Length = 215678 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 tcctcctcctctccccccgcg 271 ||||||||||||||||||||| Sbjct: 106416 tcctcctcctctccccccgcg 106396
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 cgccggccccgaggtcgccga 155 ||||||||||||||||||||| Sbjct: 4873006 cgccggccccgaggtcgccga 4873026
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 242 ccgccgacctcctcctcctctccccccgcgtcc 274 |||||||||||| || |||||||| |||||||| Sbjct: 12374537 ccgccgacctccgccgcctctcccaccgcgtcc 12374569
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 gccgccctcatgctcgcctccgccg 247 ||||||||| ||||||||||||||| Sbjct: 26635312 gccgccctcctgctcgcctccgccg 26635336 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 cggccccgaggtcgccgacccgga 161 ||||| |||||||||||||||||| Sbjct: 22920662 cggcctcgaggtcgccgacccgga 22920639
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 249 cctcctcctcctctccccccgcgtc 273 |||||||||||||||||||| |||| Sbjct: 69961 cctcctcctcctctcccccctcgtc 69937
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 gccgccctcatgctcgcctccgccg 247 ||||||||| ||||||||||||||| Sbjct: 69473 gccgccctcctgctcgcctccgccg 69497
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0045D08 Length = 160541 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 242 ccgccgacctcctcctcctctccccccgcgtcc 274 |||||||||||| || |||||||| |||||||| Sbjct: 133186 ccgccgacctccgccgcctctcccaccgcgtcc 133218
>dbj|AK121046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054K18, full insert sequence Length = 703 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 gccgccctcatgctcgcctccgccg 247 ||||||||| ||||||||||||||| Sbjct: 408 gccgccctcctgctcgcctccgccg 384
>dbj|AK101762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064B21, full insert sequence Length = 3488 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 242 ccgccgacctcctcctcctctccccccgcgtcc 274 |||||||||||| || |||||||| |||||||| Sbjct: 198 ccgccgacctccgccgcctctcccaccgcgtcc 230
>dbj|AK067034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089M24, full insert sequence Length = 1951 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 cctcctcctcctctccccccgcgtc 273 |||||||||||||||||||| |||| Sbjct: 35 cctcctcctcctctcccccctcgtc 59
>gb|AC160119.3| Mus musculus BAC clone RP23-431F16 from chromosome 9, complete sequence Length = 190900 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctcccccc 268 ||||||||||||||||||||| Sbjct: 92115 acctcctcctcctctcccccc 92095
>gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocyclic beta-lactam antibiotic nocardicin A biosynthesis gene cluster, partial sequence Length = 33451 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccgacccggaggtggcccgc 171 |||||||||||||||||||| Sbjct: 28285 ccgacccggaggtggcccgc 28304
>ref|XM_476127.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 603 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 tcgcctccgccgacctcctcctcc 259 ||||||||||||||||| |||||| Sbjct: 251 tcgcctccgccgacctcgtcctcc 274
>ref|XM_476054.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1200 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 200 acctcctcctcctctccccc 181
>ref|XM_511456.1| PREDICTED: Pan troglodytes similar to neurogenic differentiation 2 (LOC454631), mRNA Length = 1302 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 409 cctcctcctcctctcccccc 390
>gb|AC116671.14| Mus musculus chromosome 3, clone RP23-111L16, complete sequence Length = 207768 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 94971 cctcctcctcctctcccccc 94990
>gb|BC058610.1| Mus musculus myosin, light polypeptide kinase, mRNA (cDNA clone MGC:60832 IMAGE:30056142), complete cds Length = 5992 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 5905 cctcctcctcctctcccccc 5886
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gccgacccggaggtggcccg 170 |||||||||||||||||||| Sbjct: 523161 gccgacccggaggtggcccg 523180
>gb|AC156936.5| Mus musculus BAC clone RP24-90K8 from chromosome 14, complete sequence Length = 203649 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 92785 cctcctcctcctctcccccc 92766
>gb|AC154204.2| Mus musculus BAC clone RP24-393D5 from chromosome 17, complete sequence Length = 183408 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 181996 cctcctcctcctctcccccc 181977
>ref|NM_197568.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0025B05.3), mRNA Length = 1056 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 aggccggatccgaggacgag 345 |||||||||||||||||||| Sbjct: 659 aggccggatccgaggacgag 640
>ref|NM_191199.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1164 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 ccctcatgctcgcctccgccgacc 250 ||||||||| |||||||||||||| Sbjct: 479 ccctcatgcgcgcctccgccgacc 502
>ref|NM_006160.2| Homo sapiens neurogenic differentiation 2 (NEUROD2), mRNA Length = 2019 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 454 cctcctcctcctctcccccc 435
>gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, complete sequence Length = 182465 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 86053 cctcctcctcctctcccccc 86034
>gb|BT019365.1| Homo sapiens neurogenic differentiation 2 mRNA, complete cds Length = 1149 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 256 cctcctcctcctctcccccc 237
>gb|AC079290.12| Mus musculus chromosome 18, clone RP23-330E13, complete sequence Length = 202255 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 92274 cctcctcctcctctcccccc 92293
>gb|AE000664.1|MMAE000664 Mus musculus TCR beta locus from bases 250554 to 501917 (section 2 of 3) of the complete sequence Length = 251364 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 137235 cctcctcctcctctcccccc 137254
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gccggccccgaggtcgccga 155 |||||||||||||||||||| Sbjct: 1054127 gccggccccgaggtcgccga 1054146
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 tcgcctccgccgacctcctcctcc 259 ||||| |||||||||||||||||| Sbjct: 179298 tcgccgccgccgacctcctcctcc 179275
>gb|AC114621.8| Mus musculus chromosome 3, clone RP24-93M7, complete sequence Length = 198404 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 107642 cctcctcctcctctcccccc 107623
>gb|AC166331.5| Mus musculus chromosome 3, clone RP23-277D9, complete sequence Length = 187537 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 13372 cctcctcctcctctcccccc 13353
>gb|BC097157.1| Danio rerio zgc:114097, mRNA (cDNA clone MGC:114097 IMAGE:7448089), complete cds Length = 1579 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 942 ccgacctcctcctcctctcc 961
>gb|AC119875.7| Mus musculus chromosome 1, clone RP24-291C20, complete sequence Length = 162379 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 150339 cctcctcctcctctcccccc 150320
>gb|AC161050.2| Mus musculus BAC clone RP23-477C12 from chromosome 12, complete sequence Length = 197084 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 189367 cctcctcctcctctcccccc 189348
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 27529 acctcctcctcctctccccc 27548
>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0015G13, complete sequence Length = 143966 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 tcgcctccgccgacctcctcctcc 259 ||||||||||||||||| |||||| Sbjct: 36704 tcgcctccgccgacctcgtcctcc 36681
>gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete sequence Length = 164461 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ggcgcagcagcacgtcctcg 202 |||||||||||||||||||| Sbjct: 2361 ggcgcagcagcacgtcctcg 2342
>gb|AC115036.10| Mus musculus chromosome 7, clone RP24-274F20, complete sequence Length = 173506 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 105370 cctcctcctcctctcccccc 105389
>gb|AC129593.4| Mus musculus BAC clone RP24-142E6 from chromosome 7, complete sequence Length = 210291 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 207301 cctcctcctcctctcccccc 207282
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 tcgcctccgccgacctcctcctcc 259 ||||||||||||||||| |||||| Sbjct: 165320 tcgcctccgccgacctcgtcctcc 165297
>gb|AC122350.4| Mus musculus BAC clone RP23-383P18 from chromosome 17, complete sequence Length = 198521 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 30729 cctcctcctcctctcccccc 30748
>gb|AC140208.2| Mus musculus BAC clone RP24-469B21 from chromosome 14, complete sequence Length = 200350 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 16751 cctcctcctcctctcccccc 16770
>gb|AC122204.3| Mus musculus BAC clone RP23-73N8 from chromosome 1, complete sequence Length = 197949 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 78357 cctcctcctcctctcccccc 78376
>gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome 7, complete sequence Length = 230675 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 201224 cctcctcctcctctcccccc 201243
>gb|L31905.1|CYARNAPC Uncultured cyanobacterium clone 1CNH RNA polymerase gene, partial cds Length = 270 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 35 ccgaggacgagtggctggagatcg 58
>ref|NM_001025516.1| Danio rerio zgc:114097 (zgc:114097), mRNA Length = 1579 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 942 ccgacctcctcctcctctcc 961
>gb|AC123751.6| Mus musculus chromosome 8, clone RP24-187F1, complete sequence Length = 159523 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 107671 cctcctcctcctctcccccc 107652
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 12981898 ccgacctcctcctcctctcc 12981879
>gb|AC154647.2| Mus musculus BAC clone RP23-283P8 from chromosome 17, complete sequence Length = 208252 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 131355 cctcctcctcctctcccccc 131374
>gb|AC160114.2| Mus musculus BAC clone RP24-70J8 from chromosome 13, complete sequence Length = 237699 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 172269 cctcctcctcctctcccccc 172250
>gb|BC045197.1| Mus musculus myosin, light polypeptide kinase, mRNA (cDNA clone IMAGE:5025519), partial cds Length = 3470 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 3376 cctcctcctcctctcccccc 3357
>gb|AC110253.10| Mus musculus chromosome 5, clone RP23-270N2, complete sequence Length = 224182 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 gccgacctcctcctcctctccccc 267 ||||||||||||||||| |||||| Sbjct: 127006 gccgacctcctcctcctgtccccc 126983
>gb|AC007568.1| Homo sapiens BAC clone CTB-180P8 from 7q31.2, complete sequence Length = 137277 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 32435 acctcctcctcctctccccc 32416
>gb|AC125228.4| Mus musculus BAC clone RP23-45H9 from chromosome 6, complete sequence Length = 261600 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 203520 cctcctcctcctctcccccc 203539
>gb|AC126029.3| Mus musculus BAC clone RP23-389K5 from chromosome 19, complete sequence Length = 212472 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 135466 cctcctcctcctctcccccc 135447
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gccgatgctggcggtggtgc 106 |||||||||||||||||||| Sbjct: 4889318 gccgatgctggcggtggtgc 4889299
>emb|CT025836.2| uncultured sulfate-reducing bacterium, fosws7f8, complete sequence Length = 31798 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cgacaaagagctcgagtgca 295 |||||||||||||||||||| Sbjct: 9101 cgacaaagagctcgagtgca 9082
>ref|XM_381097.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00921.1) partial mRNA Length = 864 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 ccgccgacctcctcctcctc 261 |||||||||||||||||||| Sbjct: 284 ccgccgacctcctcctcctc 303
>gb|AC104103.5| Mus musculus BAC clone RP24-378I6 from chromosome 17, complete sequence Length = 137278 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 107180 cctcctcctcctctcccccc 107161
>gb|AC124558.4| Mus musculus BAC clone RP23-248O8 from chromosome 10, complete sequence Length = 199938 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 150599 cctcctcctcctctcccccc 150580
>gb|BC038902.1| Mus musculus myosin, light polypeptide kinase, mRNA (cDNA clone IMAGE:4988546), with apparent retained intron Length = 762 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 666 cctcctcctcctctcccccc 647
>gb|AC123537.3| Macaca mulatta clone CH250-75G11, complete sequence Length = 172942 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 149402 acctcctcctcctctccccc 149383
>gb|AC122452.4| Mus musculus BAC clone RP24-255M5 from chromosome 16, complete sequence Length = 181463 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 87689 cctcctcctcctctcccccc 87708
>gb|AC104100.6| Mus musculus BAC clone RP24-374D12 from chromosome 7, complete sequence Length = 139125 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 76555 cctcctcctcctctcccccc 76536
>gb|AC125128.3| Mus musculus BAC clone RP24-289N17 from chromosome 14, complete sequence Length = 180645 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 158901 cctcctcctcctctcccccc 158882
>gb|AC122911.4| Mus musculus BAC clone RP23-60K16 from 8, complete sequence Length = 150400 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 7009 cctcctcctcctctcccccc 6990
>gb|AC122192.4| Mus musculus BAC clone RP23-45B2 from 14, complete sequence Length = 178698 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 173623 cctcctcctcctctcccccc 173642
>gb|AC125183.4| Mus musculus BAC clone RP23-297M4 from 5, complete sequence Length = 221622 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 105564 cctcctcctcctctcccccc 105583
>ref|NM_139300.2| Mus musculus myosin, light polypeptide kinase (Mylk), mRNA Length = 6021 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 5922 cctcctcctcctctcccccc 5903
>gb|AC108392.17| Mus musculus chromosome 10, clone RP23-121B23, complete sequence Length = 207763 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 28723 cctcctcctcctctcccccc 28742
>gb|AC023248.20| Mus musculus chromosome 7, clone RP23-124B2, complete sequence Length = 211123 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 36621 cctcctcctcctctcccccc 36640
>gb|AC110166.17| Mus musculus chromosome 16, clone RP23-80O10, complete sequence Length = 131042 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 20798 cctcctcctcctctcccccc 20817
>gb|AC144512.1| Pan troglodytes BAC clone RP43-51G12 from 7, complete sequence Length = 161807 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 122141 acctcctcctcctctccccc 122160
>gb|AY237727.2| Mus musculus 130 kDa myosin light chain kinase (mlyk) mRNA, complete cds Length = 3545 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 3446 cctcctcctcctctcccccc 3427
>emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on chromosome 9 Contains the TSC1 gene for tuberous sclerosis 1, the C9orf9 gene for chromosome 9 open reading frame 9 protein, the 5' end of gene FLJ32704, two novel gene, the 5' end of a novel gene and three CpG islands, complete sequence Length = 199113 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gacctcctcctcctctcccc 266 |||||||||||||||||||| Sbjct: 39044 gacctcctcctcctctcccc 39063
>emb|AL121832.56|HSJ908M14 Human DNA sequence from clone RP5-908M14 on chromosome 20 Contains the RPS21 gene for ribosomal protein S21, the C20orf150 gene for a novel protein similar to Mus musculus cables,, the C20orf151 gene for a novel protein weakly similar to retinoblastoma binding protein 8 (RBBP8), a novel gene and four CpG islands, complete sequence Length = 79951 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgacctcctcctcctctccc 265 |||||||||||||||||||| Sbjct: 53203 cgacctcctcctcctctccc 53184
>emb|CR954985.1| Human DNA sequence from clone XX-HCC1954_35K08, complete sequence Length = 164576 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 133440 cctcctcctcctctcccccc 133459
>ref|XM_962281.1| PREDICTED: Tribolium castaneum similar to DNA mismatch repair protein Msh2 (MutS protein homolog 2) (LOC655722), mRNA Length = 2818 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 1218 ccgacctcctcctcctctcc 1237
>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7 Length = 349652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 247548 ccgaggacgagtggctggagatcg 247571
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ccgaggtcgccgacccggag 162 |||||||||||||||||||| Sbjct: 236266 ccgaggtcgccgacccggag 236285
>gb|BC022481.1| Homo sapiens neurogenic differentiation 2, mRNA (cDNA clone MGC:26304 IMAGE:4816285), complete cds Length = 2019 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 454 cctcctcctcctctcccccc 435
>emb|AL663012.3|OSJN00217 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0069N01, complete sequence Length = 180264 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccccgcg 271 |||||||||||||||||| ||||| Sbjct: 9234 acctcctcctcctctcccaccgcg 9211
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 125588 ccgacctcctcctcctctcc 125569
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 11269 ccgacctcctcctcctctcc 11250
>emb|AL035436.3|DMC163A10 Drosophila melanogaster cosmid clone 163A10 Length = 36056 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 28939 cctcctcctcctctcccccc 28958
>gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, complete sequence Length = 205604 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 gccgacctcctcctcctctccccc 267 ||||||||||||||||| |||||| Sbjct: 18401 gccgacctcctcctcctgtccccc 18378
>emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 bp, chromosome 7 Length = 281000 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 227981 cctcctcctcctctcccccc 228000
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 115744 acctcctcctcctctccccc 115763
>gb|AC161757.5| Mus musculus BAC clone RP24-87P2 from chromosome 5, complete sequence Length = 193583 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 44660 cctcctcctcctctcccccc 44679
>gb|AC096782.6| Oryza sativa chromosome 10 BAC OSJNBa0025B05 genomic sequence, complete sequence Length = 14849 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 aggccggatccgaggacgag 345 |||||||||||||||||||| Sbjct: 6493 aggccggatccgaggacgag 6474
>gb|AF448085.1| Synechococcus sp. HOS RNA polymerase subunit (rpoC1) gene, partial cds Length = 565 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 355 ccgaggacgagtggctggagatcg 378
>gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, complete sequence Length = 157216 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 36943 cctcctcctcctctcccccc 36962
>gb|AY119554.1| Drosophila melanogaster GH28348 full insert cDNA Length = 5886 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ggcgcagcagcacgtcctcg 202 |||||||||||||||||||| Sbjct: 3509 ggcgcagcagcacgtcctcg 3490
>emb|CR624963.1| full-length cDNA clone CS0DF008YN08 of Fetal brain of Homo sapiens (human) Length = 1938 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 406 cctcctcctcctctcccccc 387
>dbj|AK024247.1| Homo sapiens cDNA FLJ14185 fis, clone NT2RP2005719, weakly similar to GPI-ANCHORED PROTEIN P137 Length = 3449 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 1802 cctcctcctcctctcccccc 1821
>emb|CR590531.1| full-length cDNA clone CS0DF027YM01 of Fetal brain of Homo sapiens (human) Length = 1950 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 437 cctcctcctcctctcccccc 418
>gb|DQ388145.1| Homo sapiens isolate cftr13838_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) gene, complete cds; and CTTNBP2 (CTTNBP2) gene, partial cds Length = 422127 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 336326 acctcctcctcctctccccc 336307
>gb|DQ388144.1| Homo sapiens isolate cftr13838_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 423518 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 337707 acctcctcctcctctccccc 337688
>gb|DQ388143.1| Homo sapiens isolate cftr11589_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 460130 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 338172 acctcctcctcctctccccc 338153
>gb|DQ388142.1| Homo sapiens isolate cftr11589_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 461372 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 338831 acctcctcctcctctccccc 338812
>gb|DQ388141.1| Homo sapiens isolate cftr11521_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 459743 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 340686 acctcctcctcctctccccc 340667
>gb|DQ388140.1| Homo sapiens isolate cftr11521_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 468331 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 346540 acctcctcctcctctccccc 346521
>gb|DQ388139.1| Homo sapiens isolate cftr11376_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 480116 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 352533 acctcctcctcctctccccc 352514
>gb|DQ388138.1| Homo sapiens isolate cftr11376_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 450881 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 343129 acctcctcctcctctccccc 343110
>gb|DQ388135.1| Homo sapiens isolate cftr11321_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 429415 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 336939 acctcctcctcctctccccc 336920
>gb|DQ388134.1| Homo sapiens isolate cftr11321_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 434687 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 342204 acctcctcctcctctccccc 342185
>gb|DQ388137.1| Homo sapiens isolate cftr11373_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 411333 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 335869 acctcctcctcctctccccc 335850
>gb|DQ388136.1| Homo sapiens isolate cftr11373_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) gene, partial cds; and CTTNBP2 (CTTNBP2) gene, complete cds Length = 446786 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 335880 acctcctcctcctctccccc 335861
>gb|DQ388133.1| Homo sapiens isolate cftr10976_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 462987 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 339810 acctcctcctcctctccccc 339791
>gb|DQ388132.1| Homo sapiens isolate cftr10976_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 456610 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 338984 acctcctcctcctctccccc 338965
>gb|DQ388131.1| Homo sapiens isolate cftr10543_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 443905 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 336166 acctcctcctcctctccccc 336147
>gb|DQ388130.1| Homo sapiens isolate cftr10543_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 459213 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 336185 acctcctcctcctctccccc 336166
>gb|DQ388129.1| Homo sapiens isolate cftr10540_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 458144 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 335872 acctcctcctcctctccccc 335853
>gb|DQ388128.1| Homo sapiens isolate cftr10540_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 451649 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 335892 acctcctcctcctctccccc 335873
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agcacgtcctcgccggccgc 210 |||||||||||||||||||| Sbjct: 140755 agcacgtcctcgccggccgc 140774
>ref|NM_164858.1| Drosophila melanogaster junctophilin CG4405-RB, transcript variant B (jp), mRNA Length = 5760 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ggcgcagcagcacgtcctcg 202 |||||||||||||||||||| Sbjct: 3509 ggcgcagcagcacgtcctcg 3490
>ref|NM_078801.4| Drosophila melanogaster junctophilin CG4405-RA, transcript variant A (jp), mRNA Length = 5900 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ggcgcagcagcacgtcctcg 202 |||||||||||||||||||| Sbjct: 3604 ggcgcagcagcacgtcctcg 3585
>gb|AY089493.1| Drosophila melanogaster GH05993 full insert cDNA Length = 2839 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ggcgcagcagcacgtcctcg 202 |||||||||||||||||||| Sbjct: 1822 ggcgcagcagcacgtcctcg 1803
>gb|AC010198.8| Homo sapiens 12p11-37.2-54.4 BAC RP11-77I22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 199070 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 179934 cctcctcctcctctcccccc 179953
>dbj|AK134416.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030475O12 product:hypothetical protein, full insert sequence Length = 2273 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 1994 cctcctcctcctctcccccc 1975
>gb|AC096774.1| Homo sapiens BAC clone RP11-286D5 from 4, complete sequence Length = 178438 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 98187 cctcctcctcctctcccccc 98206
>gb|AF314149.1|AF314149 Mus musculus telokin mRNA, complete cds Length = 1565 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 718 cctcctcctcctctcccccc 699
>dbj|AK164403.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230008N13 product:hypothetical protein, full insert sequence Length = 2992 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 1982 cctcctcctcctctcccccc 1963
>dbj|AK162008.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720464I06 product:myosin, light polypeptide kinase, full insert sequence Length = 2329 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 2256 cctcctcctcctctcccccc 2237
>gb|AC151970.5| Mus musculus BAC clone RP24-255F16 from chromosome 15, complete sequence Length = 181163 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 100802 cctcctcctcctctcccccc 100783
>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold Length = 1678549 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 1585881 acctcctcctcctctccccc 1585862
>gb|AC156988.6| Mus musculus chromosome 1, clone RP23-362H15, complete sequence Length = 148819 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 77475 cctcctcctcctctcccccc 77494
>dbj|AB021742.1| Homo sapiens NDRF mRNA for neuroD-related factor, complete cds Length = 6246 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 3434 cctcctcctcctctcccccc 3415
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete sequence Length = 142114 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 aggccggatccgaggacgag 345 |||||||||||||||||||| Sbjct: 3405 aggccggatccgaggacgag 3424
>emb|BX511250.8| Zebrafish DNA sequence from clone CH211-57K11 in linkage group 16, complete sequence Length = 189081 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 91722 ccgacctcctcctcctctcc 91703
>gb|AC159622.2| Mus musculus BAC clone RP24-289D12 from chromosome 12, complete sequence Length = 174662 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 90384 cctcctcctcctctcccccc 90403
>gb|AC154198.3| Mus musculus BAC clone RP24-393P24 from chromosome 13, complete sequence Length = 142792 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 44531 cctcctcctcctctcccccc 44550
>gb|BC034209.1| Mus musculus myosin, light polypeptide kinase, mRNA (cDNA clone IMAGE:4988328), partial cds Length = 1140 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 1040 cctcctcctcctctcccccc 1021
>gb|BC037721.1| Mus musculus myosin, light polypeptide kinase, mRNA (cDNA clone IMAGE:4237841), partial cds Length = 2547 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 2456 cctcctcctcctctcccccc 2437
>gb|AY237726.1| Mus musculus 220 kDa myosin light chain kinase (Mlyk) mRNA, complete cds Length = 6021 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 5922 cctcctcctcctctcccccc 5903
>dbj|AK028422.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432404H11 product:unclassifiable, full insert sequence Length = 2621 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 2017 acctcctcctcctctccccc 1998
>gb|DQ356264.1| Homo sapiens isolate cftr14672_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 425451 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 339711 acctcctcctcctctccccc 339692
>gb|DQ356263.1| Homo sapiens isolate cftr14672_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 458173 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 345171 acctcctcctcctctccccc 345152
>gb|DQ356262.1| Homo sapiens isolate cftr14663_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 451123 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 338196 acctcctcctcctctccccc 338177
>gb|DQ356261.1| Homo sapiens isolate cftr14663_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) gene, partial cds; and CTTNBP2 (CTTNBP2) gene, complete cds Length = 449665 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 340433 acctcctcctcctctccccc 340414
>gb|DQ356260.1| Homo sapiens isolate cftr10975_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 447228 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 339833 acctcctcctcctctccccc 339814
>gb|DQ356259.1| Homo sapiens isolate cftr10975_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 450685 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 338968 acctcctcctcctctccccc 338949
>gb|DQ356258.1| Homo sapiens isolate cftr10471_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) gene, partial cds; and CTTNBP2 (CTTNBP2) gene, complete cds Length = 461061 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 324261 acctcctcctcctctccccc 324242
>gb|DQ356257.1| Homo sapiens isolate cftr10471_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 495329 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 348609 acctcctcctcctctccccc 348590
>dbj|AK053079.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930045I23 product:unclassifiable, full insert sequence Length = 3871 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 2813 cctcctcctcctctcccccc 2832
>gb|AC158659.6| Mus musculus 6 BAC RP23-381J6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198792 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 184592 cctcctcctcctctcccccc 184573
>dbj|AK078556.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820449L08 product:MYOSIN LIGHT CHAIN KINASE, SMOOTH MUSCLE (EC 2.7.1.117) (MLCK) [CONTAINS: TELOKIN] (FRAGMENT) homolog [Ovis aries], full insert sequence Length = 2645 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 2570 cctcctcctcctctcccccc 2551
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gccgacctcctcctcctctc 263 |||||||||||||||||||| Sbjct: 21454088 gccgacctcctcctcctctc 21454069 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gccgacctcctcctcctctc 263 |||||||||||||||||||| Sbjct: 21443426 gccgacctcctcctcctctc 21443407 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 cgccgacctcctcctcctct 262 |||||||||||||||||||| Sbjct: 17030470 cgccgacctcctcctcctct 17030489
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 tcgcctccgccgacctcctcctcc 259 ||||| |||||||||||||||||| Sbjct: 3811626 tcgccgccgccgacctcctcctcc 3811603
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 aggccggatccgaggacgag 345 |||||||||||||||||||| Sbjct: 20498115 aggccggatccgaggacgag 20498134
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 tcgcctccgccgacctcctcctcc 259 ||||||||||||||||| |||||| Sbjct: 6334965 tcgcctccgccgacctcgtcctcc 6334942 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 4141050 acctcctcctcctctccccc 4141069
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 12978673 ccgacctcctcctcctctcc 12978654
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ccctcatgctcgcctccgccgacc 250 ||||||||| |||||||||||||| Sbjct: 31280793 ccctcatgcgcgcctccgccgacc 31280770
>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR07D23, complete sequence Length = 176610 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ggcgcagcagcacgtcctcg 202 |||||||||||||||||||| Sbjct: 174250 ggcgcagcagcacgtcctcg 174269
>emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013A04, complete sequence Length = 188209 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccccgcg 271 |||||||||||||||||| ||||| Sbjct: 157988 acctcctcctcctctcccaccgcg 157965
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 1572384 acctcctcctcctctccccc 1572365
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold Length = 1825024 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 1611227 acctcctcctcctctccccc 1611208
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold Length = 1819346 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 1581934 acctcctcctcctctccccc 1581915
>gb|AC153849.8| Mus musculus BAC RP23-97L11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205220 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 43965 cctcctcctcctctcccccc 43984
>gb|AC116543.6| Drosophila melanogaster X BAC RP98-1A14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182387 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 84963 cctcctcctcctctcccccc 84944
>gb|AC138303.4| Mus musculus BAC clone RP23-43G12 from chromosome 12, complete sequence Length = 207693 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 179191 cctcctcctcctctcccccc 179210 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 179092 cctcctcctcctctcccccc 179111
>gb|AY157712.1| Oryzias latipes putative zinc finger transcription factor (DMRT1a) gene, complete cds Length = 27078 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 11136 cctcctcctcctctcccccc 11155
>emb|AJ621016.1| Synechococcus sp. Minos02 partial rpoC1 gene for DNA-dependent RNA polymerase Length = 514 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 279 ccgaggacgagtggctggagatcg 302
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ccctcatgctcgcctccgccgacc 250 ||||||||| |||||||||||||| Sbjct: 35076 ccctcatgcgcgcctccgccgacc 35053
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gcgcagcagcacgtcctcgc 203 |||||||||||||||||||| Sbjct: 6437771 gcgcagcagcacgtcctcgc 6437790
>gb|DQ354391.1| Homo sapiens isolate cftr01814_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 439798 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 351205 acctcctcctcctctccccc 351186
>gb|DQ354390.1| Homo sapiens isolate cftr01814_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 437219 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 342461 acctcctcctcctctccccc 342442
>gb|DQ354389.1| Homo sapiens isolate cftr14683_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 430078 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 337571 acctcctcctcctctccccc 337552
>gb|DQ354388.1| Homo sapiens isolate cftr14683_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 461441 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 337684 acctcctcctcctctccccc 337665
>emb|AJ621524.1| uncultured Synechococcus sp. partial rpoC1 gene for DNA-dependent RNA polymerase, clone RFLP-type S43 Length = 403 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 222 ccgaggacgagtggctggagatcg 245
>emb|AJ621522.1| uncultured Synechococcus sp. partial rpoC1 gene for DNA-dependent RNA polymerase, clone RFLP-type S39 Length = 403 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 222 ccgaggacgagtggctggagatcg 245
>emb|AJ621516.1| uncultured Synechococcus sp. partial rpoC1 gene for DNA-dependent RNA polymerase, clone RFLP-type S32 Length = 403 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 222 ccgaggacgagtggctggagatcg 245
>emb|AJ621515.1| uncultured Synechococcus sp. partial rpoC1 gene for DNA-dependent RNA polymerase, clone RFLP-type S31 Length = 403 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 222 ccgaggacgagtggctggagatcg 245
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 59596 ccgacctcctcctcctctcc 59577
>emb|AJ621023.1| Synechococcus sp. Eum14 partial rpoC1 gene for DNA-dependent RNA polymerase Length = 514 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 279 ccgaggacgagtggctggagatcg 302
>emb|AJ621019.1| Synechococcus sp. Minos12 partial rpoC1 gene for DNA-dependent RNA polymerase Length = 514 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 279 ccgaggacgagtggctggagatcg 302
>emb|AJ621018.1| Synechococcus sp. Oli31 partial rpoC1 gene for DNA-dependent RNA polymerase Length = 514 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 279 ccgaggacgagtggctggagatcg 302
>emb|AJ621017.1| Synechococcus sp. Max42 partial rpoC1 gene for DNA-dependent RNA polymerase Length = 514 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 279 ccgaggacgagtggctggagatcg 302
>emb|AJ621006.1| Synechococcus sp. RS9905 partial rpoC1 gene for DNA-dependent RNA polymerase Length = 403 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 222 ccgaggacgagtggctggagatcg 245
>gb|AF245158.1|AF245158 Synechococcus PCC7920 RNA polymerase subunit (rpoC1) gene, partial cds Length = 560 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 357 ccgaggacgagtggctggagatcg 380
>gb|AF245139.1|AF245139 Synechococcus sp. PS681 RNA polymerase subunit (rpoC1) gene, partial cds Length = 563 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 355 ccgaggacgagtggctggagatcg 378
>gb|AF245137.1|AF245137 Synechococcus sp. PS678 RNA polymerase subunit (rpoC1) gene, partial cds Length = 572 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 365 ccgaggacgagtggctggagatcg 388
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 cggccccgaggtcgccgacccgga 161 ||||| |||||||||||||||||| Sbjct: 40464 cggcctcgaggtcgccgacccgga 40441
>emb|AJ584738.1| Uncultured Synechococcus sp. partial rpoC1 gene for DNA-dependent RNA polymerase, clone RFLP-type S42 Length = 403 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 222 ccgaggacgagtggctggagatcg 245
>emb|AJ584732.1| Uncultured Synechococcus sp. partial rpoC1 gene for DNA-dependent RNA polymerase, clone RFLP-type S27 Length = 403 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 222 ccgaggacgagtggctggagatcg 245
>emb|AJ584729.1| Uncultured Synechococcus sp. partial rpoC1 gene for DNA-dependent RNA polymerase, clone RFLP-type S19 Length = 403 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 222 ccgaggacgagtggctggagatcg 245
>gb|AY890500.1| Synthetic construct Homo sapiens clone FLH141689.01X neurogenic differentiation 2 (NEUROD2) mRNA, complete cds Length = 1149 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 256 cctcctcctcctctcccccc 237
>gb|AC157093.4| Mus musculus 6 BAC RP24-338D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 185068 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 176145 cctcctcctcctctcccccc 176164
>gb|AC158183.2| Selaginella moellendorffii clone JGIASXY-5D8, complete sequence Length = 39479 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 35039 cctcctcctcctctcccccc 35020
>gb|AY888251.1| Synthetic construct Homo sapiens clone FLH009489.01X neurogenic differentiation 2 (NEUROD2) mRNA, complete cds Length = 1149 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 256 cctcctcctcctctcccccc 237
>dbj|AK122148.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138H13, full insert sequence Length = 1333 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 ccctcatgctcgcctccgccgacc 250 ||||||||| |||||||||||||| Sbjct: 501 ccctcatgcgcgcctccgccgacc 524
>emb|Z50182.1|RSMGPGN R.sphaeroides mgpS gene and putative open reading frame Length = 3900 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gccggccccgaggtcgccga 155 |||||||||||||||||||| Sbjct: 2762 gccggccccgaggtcgccga 2781
>dbj|AK109114.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C05, full insert sequence Length = 1492 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 346 ccgacctcctcctcctctcc 365
>dbj|AK103412.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128G01, full insert sequence Length = 1665 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 345 acctcctcctcctctccccc 326
>dbj|AK100216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045H21, full insert sequence Length = 1905 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 256 acctcctcctcctctccccc 237
>dbj|AK073826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067F03, full insert sequence Length = 1333 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 ccctcatgctcgcctccgccgacc 250 ||||||||| |||||||||||||| Sbjct: 501 ccctcatgcgcgcctccgccgacc 524
>gb|AF153339.1|AF153339 Synechococcus sp. C129 RNA polymerase subunit (rpoC1) gene, partial cds Length = 612 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 377 ccgaggacgagtggctggagatcg 400
>gb|AF153337.1|AF153337 Synechococcus sp. CC9702 RNA polymerase subunit (rpoC1) gene, partial cds Length = 612 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 377 ccgaggacgagtggctggagatcg 400
>gb|AF153336.1|AF153336 Synechococcus sp. WH8102 RNA polymerase subunit (rpoC1) gene, partial cds Length = 612 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 377 ccgaggacgagtggctggagatcg 400
>gb|AF153335.1|AF153335 Synechococcus sp. WH8113 RNA polymerase subunit (rpoC1) gene, partial cds Length = 612 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 377 ccgaggacgagtggctggagatcg 400
>gb|AF153334.1|AF153334 Synechococcus sp. WH8011 RNA polymerase subunit (rpoC1) gene, partial cds Length = 612 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 377 ccgaggacgagtggctggagatcg 400
>gb|AF153333.1|AF153333 Synechococcus sp. WH8112 RNA polymerase subunit (rpoC1) gene, partial cds Length = 612 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 377 ccgaggacgagtggctggagatcg 400
>gb|AF153332.1|AF153332 Synechococcus sp. CC9301 RNA polymerase subunit (rpoC1) gene, partial cds Length = 612 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 377 ccgaggacgagtggctggagatcg 400
>dbj|AK071222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085I16, full insert sequence Length = 1736 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 aggccggatccgaggacgag 345 |||||||||||||||||||| Sbjct: 1058 aggccggatccgaggacgag 1039
>emb|CT963096.1| M.spretus DNA sequence from clone XX-CH35_391C2 on chromosome 7, complete sequence Length = 164625 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 66176 cctcctcctcctctcccccc 66157
>gb|AC133197.3| Mus musculus BAC clone RP23-228E15 from 8, complete sequence Length = 197899 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 69067 cctcctcctcctctcccccc 69048
>dbj|AK061516.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H07, full insert sequence Length = 1074 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ccgacctcctcctcctctcc 264 |||||||||||||||||||| Sbjct: 143 ccgacctcctcctcctctcc 162
>gb|AC105165.11| Mus musculus chromosome 18, clone RP24-302C24, complete sequence Length = 186431 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 186403 cctcctcctcctctcccccc 186384
>gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR24A22, complete sequence Length = 183007 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ggcgcagcagcacgtcctcg 202 |||||||||||||||||||| Sbjct: 152254 ggcgcagcagcacgtcctcg 152235
>gb|AC004828.2|AC004828 Homo sapiens clone DJ0514A23, complete sequence Length = 183249 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 88958 cctcctcctcctctcccccc 88977
>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete sequence Length = 271507 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ggcgcagcagcacgtcctcg 202 |||||||||||||||||||| Sbjct: 114451 ggcgcagcagcacgtcctcg 114470
>gb|AE003426.3| Drosophila melanogaster chromosome X, section 10 of 74 of the complete sequence Length = 396604 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 211644 cctcctcctcctctcccccc 211663
>emb|CT009721.14| Mouse DNA sequence from clone RP23-130L13 on chromosome 9, complete sequence Length = 50450 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 10793 cctcctcctcctctcccccc 10812
>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105 Length = 340000 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 132402 cctcctcctcctctcccccc 132383
>emb|BX537569.1|HSM806197 Homo sapiens mRNA; cDNA DKFZp686D159 (from clone DKFZp686D159) Length = 6546 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 4847 cctcctcctcctctcccccc 4866
>gb|AC138725.3| Cercopithecus aethiops clone CH252-336C2, complete sequence Length = 174407 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 acctcctcctcctctccccc 267 |||||||||||||||||||| Sbjct: 131248 acctcctcctcctctccccc 131229
>gb|AF013610.1|AF013610 Synechococcus sp. CC9305-3 RNA polymerase subunit (rpoC1) gene, partial cds Length = 612 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 377 ccgaggacgagtggctggagatcg 400
>gb|AF013609.1|AF013609 Synechococcus sp. CC9317 RNA polymerase subunit (rpoC1) gene, partial cds Length = 612 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgaggacgagtcgctggagatcg 358 |||||||||||| ||||||||||| Sbjct: 377 ccgaggacgagtggctggagatcg 400
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 aggccggatccgaggacgag 345 |||||||||||||||||||| Sbjct: 20509387 aggccggatccgaggacgag 20509406
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 tcgcctccgccgacctcctcctcc 259 ||||| |||||||||||||||||| Sbjct: 3820320 tcgccgccgccgacctcctcctcc 3820297
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gccgacctcctcctcctctc 263 |||||||||||||||||||| Sbjct: 21382409 gccgacctcctcctcctctc 21382390 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gccgacctcctcctcctctc 263 |||||||||||||||||||| Sbjct: 21371747 gccgacctcctcctcctctc 21371728 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 cgccgacctcctcctcctct 262 |||||||||||||||||||| Sbjct: 16983846 cgccgacctcctcctcctct 16983865
>gb|U58681.1|HSU58681 Homo sapiens neurogenic basic-helix-loop-helix protein (NeuroD2) gene, complete cds Length = 1550 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 313 cctcctcctcctctcccccc 294
>emb|AL713941.3|CNS07YP9 Oryza sativa chromosome 12, . BAC OSJNBa0006M08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136254 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 cgccgacctcctcctcctct 262 |||||||||||||||||||| Sbjct: 118273 cgccgacctcctcctcctct 118254
>gb|AC151001.2| Mus musculus BAC clone RP23-45M16 from 7, complete sequence Length = 176698 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 36191 cctcctcctcctctcccccc 36172
>gb|AC134555.4| Mus musculus BAC clone RP24-320K4 from 17, complete sequence Length = 174388 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 172911 cctcctcctcctctcccccc 172930
>gb|AC124428.4| Mus musculus BAC clone RP24-239M23 from 5, complete sequence Length = 167334 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 103927 cctcctcctcctctcccccc 103946
>gb|AC129214.5| Mus musculus BAC clone RP24-426N11 from 16, complete sequence Length = 191966 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctcctcctcctctcccccc 268 |||||||||||||||||||| Sbjct: 15953 cctcctcctcctctcccccc 15972
>gb|AC000392.1|AC000392 Genomic sequence from Human 9q34, complete sequence Length = 44266 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 gacctcctcctcctctcccc 266 |||||||||||||||||||| Sbjct: 30333 gacctcctcctcctctcccc 30314 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,962,273 Number of Sequences: 3902068 Number of extensions: 3962273 Number of successful extensions: 140322 Number of sequences better than 10.0: 260 Number of HSP's better than 10.0 without gapping: 264 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 136949 Number of HSP's gapped (non-prelim): 3373 length of query: 425 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 403 effective length of database: 17,147,199,772 effective search space: 6910321508116 effective search space used: 6910321508116 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)