ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast42e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 280 2e-72
2dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic D... 280 2e-72
3dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic D... 125 7e-26
4dbj|AP004630.3| Oryza sativa (japonica cultivar-group) genomic D... 125 7e-26
5dbj|AK068185.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 7e-26
6ref|XM_467628.1| Oryza sativa (japonica cultivar-group), mRNA 84 2e-13
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 84 2e-13
8dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic D... 84 2e-13
9dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic D... 84 2e-13
10gb|DQ429567.1| Sorghum bicolor voucher PI585454 locus pSB1120 ge... 50 0.003
11gb|DQ429566.1| Sorghum bicolor voucher PI267539 locus pSB1120 ge... 50 0.003
12gb|DQ429565.1| Sorghum bicolor voucher PI267408 locus pSB1120 ge... 50 0.003
13gb|DQ429564.1| Sorghum bicolor voucher PI221607 locus pSB1120 ge... 50 0.003
14gb|DQ429563.1| Sorghum bicolor voucher PI152702 locus pSB1120 ge... 50 0.003
15gb|DQ429562.1| Sorghum bicolor voucher NSL92371 locus pSB1120 ge... 50 0.003
16gb|DQ429561.1| Sorghum bicolor voucher NSL87902b locus pSB1120 g... 50 0.003
17gb|DQ429560.1| Sorghum bicolor voucher NSL87902a locus pSB1120 g... 50 0.003
18gb|DQ429559.1| Sorghum bicolor voucher NSL87666 locus pSB1120 ge... 50 0.003
19gb|DQ429558.1| Sorghum bicolor voucher NSL77217 locus pSB1120 ge... 50 0.003
20gb|DQ429557.1| Sorghum bicolor voucher NSL77034 locus pSB1120 ge... 50 0.003
21gb|DQ429556.1| Sorghum bicolor voucher NSL56174 locus pSB1120 ge... 50 0.003
22gb|DQ429555.1| Sorghum bicolor voucher NSL56003 locus pSB1120 ge... 50 0.003
23gb|DQ429554.1| Sorghum bicolor voucher NSL55243 locus pSB1120 ge... 50 0.003
24gb|DQ429553.1| Sorghum bicolor voucher NSL51365 locus pSB1120 ge... 50 0.003
25gb|DQ429552.1| Sorghum bicolor voucher NSL51030 locus pSB1120 ge... 50 0.003
26gb|DQ429551.1| Sorghum bicolor voucher NSL50875 locus pSB1120 ge... 50 0.003
27gb|DQ429550.1| Sorghum bicolor voucher BTx623 locus pSB1120 geno... 50 0.003
28ref|NM_193176.1| Oryza sativa (japonica cultivar-group), predic... 46 0.049
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.049
30dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.049
31dbj|AK101002.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.049
32ref|XM_464563.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.19
33dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.19
34dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.19
35dbj|AK067907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.19
36gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.76
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.76
38gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.76
39gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.76
40dbj|AK106150.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.76
41dbj|AK104714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.76
42dbj|AK066587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.76
43ref|NM_196495.1| Oryza sativa (japonica cultivar-group) putative... 40 3.0
44gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 3.0
45gb|DQ429568.1| Sorghum propinquum locus pSB1120 genomic sequence 40 3.0
46gb|AC182812.1| Gasterosteus aculeatus clone VMRC28-91C14, comple... 40 3.0
47dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
48dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 3.0
49gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 40 3.0
50gb|AY648560.1| Klebsiella pneumoniae strain M5a1 Orf1 gene, part... 40 3.0
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  280 bits (141), Expect = 2e-72
 Identities = 207/229 (90%)
 Strand = Plus / Minus

                                                                           
Query: 7       gtacctgatgatgcggccgcgctccgtgtacctcgtcgactacgcctgcttccgcaccaa 66
               |||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 8420847 gtacctcatgctgcggccgcgccccgtgtacctcgtcgactacgcgtgcttccgcaccaa 8420788

                                                                           
Query: 67      gcccagccaccgcgtccccttcggcaccttcctcgagcacgccaagctggtgacgttcat 126
               ||||| |  ||||||||| |||| ||| |||||||||||||||||||||||||||| | |
Sbjct: 8420787 gcccaactgccgcgtcccgttcgccacgttcctcgagcacgccaagctggtgacgtacgt 8420728

                                                                           
Query: 127     cgagggggcctccattgacgagcgcagcgtccggttcatgacgcggctgctggagcggtc 186
                ||||| || ||||| |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 8420727 ggagggcgcgtccatcgacgagcgcagcgtgcggttcatgacgcggctgctcgagcggtc 8420668

                                                                
Query: 187     cggtctcggggaggagacgtgcctgccccccgcgcaccacttcatcccg 235
                || ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 8420667 ggggctcggggaggagacgtgcctgccgccggcgcaccacttcatcccg 8420619



 Score =  125 bits (63), Expect = 7e-26
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                           
Query: 145     cgagcgcagcgtccggttcatgacgcggctgctggagcggtccggtctcggggaggagac 204
               |||||||||||| |||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 8610290 cgagcgcagcgtgcggttcatgacgcggctgctcgagcggtcggggctcggggaggagac 8610231

                                              
Query: 205     gtgcctgccccccgcgcaccacttcatcccg 235
               ||||||||| || |||||||||| |||||||
Sbjct: 8610230 gtgcctgccgccggcgcaccactacatcccg 8610200



 Score =  101 bits (51), Expect = 1e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                           
Query: 149     cgcagcgtccggttcatgacgcggctgctggagcggtccggtctcggggaggagacgtgc 208
               |||||||| |||||||||||||||||||| ||||| || || ||||||||||||||||||
Sbjct: 8522482 cgcagcgtgcggttcatgacgcggctgctcgagcgatcggggctcggggaggagacgtgc 8522541

                                          
Query: 209     ctgccccccgcgcaccacttcatcccg 235
               ||||| || ||| |||||| |||||||
Sbjct: 8522542 ctgccaccggcgaaccactacatcccg 8522568



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                           
Query: 15      tgatgcggccgcgctccgtgtacctcgtcgactacgcctgcttccgcaccaagcccagcc 74
               ||||||| |||||  | |||||||||||||||||||| |||||||||||   ||||| | 
Sbjct: 8610405 tgatgcgcccgcgggcggtgtacctcgtcgactacgcgtgcttccgcacggcgcccaact 8610346

                                                 
Query: 75      accgcgtccccttcggcaccttcctcgagcacgc 108
                ||||||||| |||| ||| ||||||||||||||
Sbjct: 8610345 gccgcgtccctttcgccacgttcctcgagcacgc 8610312



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                           
Query: 35      tacctcgtcgactacgcctgcttccgcaccaagcccagccaccgcgtccccttcggcacc 94
               ||||||||||||||||||||||||||  |  |||| ||| ||||| |||| |||| ||||
Sbjct: 8657361 tacctcgtcgactacgcctgcttccggcctcagccgagcaaccgcctcccattcgccacc 8657302

                           
Query: 95      ttcctcgagcac 106
               |||  |||||||
Sbjct: 8657301 ttcgccgagcac 8657290



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                           
Query: 35      tacctcgtcgactacgcctgcttccgcaccaagcccagccaccgcgtccccttcggcacc 94
               ||||||||||| ||||| |||||||||||   ||||| |  ||| ||||||   | ||||
Sbjct: 8522383 tacctcgtcgattacgcgtgcttccgcacggcgcccaactgccgtgtccccgcagccacc 8522442

                                  
Query: 95      ttcctcgagcacgccaagc 113
               ||||||||| |||||||||
Sbjct: 8522443 ttcctcgagtacgccaagc 8522461
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>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0092H22
          Length = 165194

 Score =  280 bits (141), Expect = 2e-72
 Identities = 207/229 (90%)
 Strand = Plus / Minus

                                                                         
Query: 7     gtacctgatgatgcggccgcgctccgtgtacctcgtcgactacgcctgcttccgcaccaa 66
             |||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 35548 gtacctcatgctgcggccgcgccccgtgtacctcgtcgactacgcgtgcttccgcaccaa 35489

                                                                         
Query: 67    gcccagccaccgcgtccccttcggcaccttcctcgagcacgccaagctggtgacgttcat 126
             ||||| |  ||||||||| |||| ||| |||||||||||||||||||||||||||| | |
Sbjct: 35488 gcccaactgccgcgtcccgttcgccacgttcctcgagcacgccaagctggtgacgtacgt 35429

                                                                         
Query: 127   cgagggggcctccattgacgagcgcagcgtccggttcatgacgcggctgctggagcggtc 186
              ||||| || ||||| |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 35428 ggagggcgcgtccatcgacgagcgcagcgtgcggttcatgacgcggctgctcgagcggtc 35369

                                                              
Query: 187   cggtctcggggaggagacgtgcctgccccccgcgcaccacttcatcccg 235
              || ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 35368 ggggctcggggaggagacgtgcctgccgccggcgcaccacttcatcccg 35320



 Score =  101 bits (51), Expect = 1e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                          
Query: 149    cgcagcgtccggttcatgacgcggctgctggagcggtccggtctcggggaggagacgtgc 208
              |||||||| |||||||||||||||||||| ||||| || || ||||||||||||||||||
Sbjct: 137183 cgcagcgtgcggttcatgacgcggctgctcgagcgatcggggctcggggaggagacgtgc 137242

                                         
Query: 209    ctgccccccgcgcaccacttcatcccg 235
              ||||| || ||| |||||| |||||||
Sbjct: 137243 ctgccaccggcgaaccactacatcccg 137269



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                          
Query: 35     tacctcgtcgactacgcctgcttccgcaccaagcccagccaccgcgtccccttcggcacc 94
              ||||||||||| ||||| |||||||||||   ||||| |  ||| ||||||   | ||||
Sbjct: 137084 tacctcgtcgattacgcgtgcttccgcacggcgcccaactgccgtgtccccgcagccacc 137143

                                 
Query: 95     ttcctcgagcacgccaagc 113
              ||||||||| |||||||||
Sbjct: 137144 ttcctcgagtacgccaagc 137162
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>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0037N01
          Length = 174085

 Score =  125 bits (63), Expect = 7e-26
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                         
Query: 145   cgagcgcagcgtccggttcatgacgcggctgctggagcggtccggtctcggggaggagac 204
             |||||||||||| |||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 25272 cgagcgcagcgtgcggttcatgacgcggctgctcgagcggtcggggctcggggaggagac 25213

                                            
Query: 205   gtgcctgccccccgcgcaccacttcatcccg 235
             ||||||||| || |||||||||| |||||||
Sbjct: 25212 gtgcctgccgccggcgcaccactacatcccg 25182



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                         
Query: 15    tgatgcggccgcgctccgtgtacctcgtcgactacgcctgcttccgcaccaagcccagcc 74
             ||||||| |||||  | |||||||||||||||||||| |||||||||||   ||||| | 
Sbjct: 25387 tgatgcgcccgcgggcggtgtacctcgtcgactacgcgtgcttccgcacggcgcccaact 25328

                                               
Query: 75    accgcgtccccttcggcaccttcctcgagcacgc 108
              ||||||||| |||| ||| ||||||||||||||
Sbjct: 25327 gccgcgtccctttcgccacgttcctcgagcacgc 25294



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 35    tacctcgtcgactacgcctgcttccgcaccaagcccagccaccgcgtccccttcggcacc 94
             ||||||||||||||||||||||||||  |  |||| ||| ||||| |||| |||| ||||
Sbjct: 72343 tacctcgtcgactacgcctgcttccggcctcagccgagcaaccgcctcccattcgccacc 72284

                         
Query: 95    ttcctcgagcac 106
             |||  |||||||
Sbjct: 72283 ttcgccgagcac 72272
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>dbj|AP004630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0031A09
          Length = 162511

 Score =  125 bits (63), Expect = 7e-26
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                         
Query: 145   cgagcgcagcgtccggttcatgacgcggctgctggagcggtccggtctcggggaggagac 204
             |||||||||||| |||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 85109 cgagcgcagcgtgcggttcatgacgcggctgctcgagcggtcggggctcggggaggagac 85050

                                            
Query: 205   gtgcctgccccccgcgcaccacttcatcccg 235
             ||||||||| || |||||||||| |||||||
Sbjct: 85049 gtgcctgccgccggcgcaccactacatcccg 85019



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                         
Query: 15    tgatgcggccgcgctccgtgtacctcgtcgactacgcctgcttccgcaccaagcccagcc 74
             ||||||| |||||  | |||||||||||||||||||| |||||||||||   ||||| | 
Sbjct: 85224 tgatgcgcccgcgggcggtgtacctcgtcgactacgcgtgcttccgcacggcgcccaact 85165

                                               
Query: 75    accgcgtccccttcggcaccttcctcgagcacgc 108
              ||||||||| |||| ||| ||||||||||||||
Sbjct: 85164 gccgcgtccctttcgccacgttcctcgagcacgc 85131



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                          
Query: 35     tacctcgtcgactacgcctgcttccgcaccaagcccagccaccgcgtccccttcggcacc 94
              ||||||||||||||||||||||||||  |  |||| ||| ||||| |||| |||| ||||
Sbjct: 132180 tacctcgtcgactacgcctgcttccggcctcagccgagcaaccgcctcccattcgccacc 132121

                          
Query: 95     ttcctcgagcac 106
              |||  |||||||
Sbjct: 132120 ttcgccgagcac 132109
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>dbj|AK068185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135C17, full
           insert sequence
          Length = 1669

 Score =  125 bits (63), Expect = 7e-26
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                       
Query: 145 cgagcgcagcgtccggttcatgacgcggctgctggagcggtccggtctcggggaggagac 204
           |||||||||||| |||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 441 cgagcgcagcgtgcggttcatgacgcggctgctcgagcggtcggggctcggggaggagac 500

                                          
Query: 205 gtgcctgccccccgcgcaccacttcatcccg 235
           ||||||||| || |||||||||| |||||||
Sbjct: 501 gtgcctgccgccggcgcaccactacatcccg 531



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgatgcggccgcgctccgtgtacctcgtcgactacgcctgcttccgcaccaagcccagcc 74
           ||||||| |||||  | |||||||||||||||||||| |||||||||||   ||||| | 
Sbjct: 326 tgatgcgcccgcgggcggtgtacctcgtcgactacgcgtgcttccgcacggcgcccaact 385

                                             
Query: 75  accgcgtccccttcggcaccttcctcgagcacgc 108
            ||||||||| |||| ||| ||||||||||||||
Sbjct: 386 gccgcgtccctttcgccacgttcctcgagcacgc 419
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>ref|XM_467628.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1458

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                       
Query: 146 gagcgcagcgtccggttcatgacgcggctgctggagcggtccggtctcggggaggagacg 205
           ||||| |||||||||||||||||||| ||||| ||||| || || ||||| |||||||| 
Sbjct: 337 gagcggagcgtccggttcatgacgcgcctgctcgagcgatcgggcctcggcgaggagacc 396

                                         
Query: 206 tgcctgccccccgcgcaccacttcatcccg 235
           |||||||||  |||||| |||| |||||||
Sbjct: 397 tgcctgccctacgcgcagcactacatcccg 426
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                            
Query: 146      gagcgcagcgtccggttcatgacgcggctgctggagcggtccggtctcggggaggagacg 205
                ||||| |||||||||||||||||||| ||||| ||||| || || ||||| |||||||| 
Sbjct: 30519169 gagcggagcgtccggttcatgacgcgcctgctcgagcgatcgggcctcggcgaggagacc 30519228

                                              
Query: 206      tgcctgccccccgcgcaccacttcatcccg 235
                |||||||||  |||||| |||| |||||||
Sbjct: 30519229 tgcctgccctacgcgcagcactacatcccg 30519258



 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 23      ccgcgctccgtgtacctcgtcgactacgcctgct 56
               |||||| |||| ||||||||||||| ||||||||
Sbjct: 5932054 ccgcgccccgtctacctcgtcgacttcgcctgct 5932021
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>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0643A10
          Length = 187931

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                         
Query: 146   gagcgcagcgtccggttcatgacgcggctgctggagcggtccggtctcggggaggagacg 205
             ||||| |||||||||||||||||||| ||||| ||||| || || ||||| |||||||| 
Sbjct: 31177 gagcggagcgtccggttcatgacgcgcctgctcgagcgatcgggcctcggcgaggagacc 31236

                                           
Query: 206   tgcctgccccccgcgcaccacttcatcccg 235
             |||||||||  |||||| |||| |||||||
Sbjct: 31237 tgcctgccctacgcgcagcactacatcccg 31266
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>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0617A09
          Length = 134804

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                          
Query: 146    gagcgcagcgtccggttcatgacgcggctgctggagcggtccggtctcggggaggagacg 205
              ||||| |||||||||||||||||||| ||||| ||||| || || ||||| |||||||| 
Sbjct: 125217 gagcggagcgtccggttcatgacgcgcctgctcgagcgatcgggcctcggcgaggagacc 125276

                                            
Query: 206    tgcctgccccccgcgcaccacttcatcccg 235
              |||||||||  |||||| |||| |||||||
Sbjct: 125277 tgcctgccctacgcgcagcactacatcccg 125306
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>gb|DQ429567.1| Sorghum bicolor voucher PI585454 locus pSB1120 genomic sequence
          Length = 791

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 721 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 765



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 594 cgtgtacctcgtggagtacggctgcttccggcccaagccc 633
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>gb|DQ429566.1| Sorghum bicolor voucher PI267539 locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429565.1| Sorghum bicolor voucher PI267408 locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429564.1| Sorghum bicolor voucher PI221607 locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429563.1| Sorghum bicolor voucher PI152702 locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429562.1| Sorghum bicolor voucher NSL92371 locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429561.1| Sorghum bicolor voucher NSL87902b locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429560.1| Sorghum bicolor voucher NSL87902a locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429559.1| Sorghum bicolor voucher NSL87666 locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429558.1| Sorghum bicolor voucher NSL77217 locus pSB1120 genomic sequence
          Length = 790

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 720 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 764



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 593 cgtgtacctcgtggagtacggctgcttccggcccaagccc 632
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>gb|DQ429557.1| Sorghum bicolor voucher NSL77034 locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429556.1| Sorghum bicolor voucher NSL56174 locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429555.1| Sorghum bicolor voucher NSL56003 locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429554.1| Sorghum bicolor voucher NSL55243 locus pSB1120 genomic sequence
          Length = 790

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 720 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 764



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 593 cgtgtacctcgtggagtacggctgcttccggcccaagccc 632
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>gb|DQ429553.1| Sorghum bicolor voucher NSL51365 locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>gb|DQ429552.1| Sorghum bicolor voucher NSL51030 locus pSB1120 genomic sequence
          Length = 791

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 721 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 765



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 594 cgtgtacctcgtggagtacggctgcttccggcccaagccc 633
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>gb|DQ429551.1| Sorghum bicolor voucher NSL50875 locus pSB1120 genomic sequence
          Length = 790

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 720 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 764



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 593 cgtgtacctcgtggagtacggctgcttccggcccaagccc 632
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>gb|DQ429550.1| Sorghum bicolor voucher BTx623 locus pSB1120 genomic sequence
          Length = 788

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgcctgccc 214
           |||||||||||||| || || ||||| |||||||||| |||||||
Sbjct: 718 cggctgctggagcgctcggggctcggcgaggagacgtccctgccc 762



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 591 cgtgtacctcgtggagtacggctgcttccggcccaagccc 630
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>ref|NM_193176.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1437

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgc 208
           ||||||||||||||||| || ||||| || |||||||||
Sbjct: 331 cggctgctggagcggtcggggctcggcgacgagacgtgc 369
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 170      cggctgctggagcggtccggtctcggggaggagacgtgc 208
                ||||||||||||||||| || ||||| || |||||||||
Sbjct: 19055751 cggctgctggagcggtcggggctcggcgacgagacgtgc 19055789
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>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0702H08
          Length = 166899

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 170   cggctgctggagcggtccggtctcggggaggagacgtgc 208
             ||||||||||||||||| || ||||| || |||||||||
Sbjct: 21168 cggctgctggagcggtcggggctcggcgacgagacgtgc 21206
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>dbj|AK101002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147G07, full
           insert sequence
          Length = 1933

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 170 cggctgctggagcggtccggtctcggggaggagacgtgc 208
           ||||||||||||||||| || ||||| || |||||||||
Sbjct: 407 cggctgctggagcggtcggggctcggcgacgagacgtgc 445
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>ref|XM_464563.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1929

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 23  ccgcgctccgtgtacctcgtcgactacgcctgct 56
           |||||| |||| ||||||||||||| ||||||||
Sbjct: 412 ccgcgccccgtctacctcgtcgacttcgcctgct 445
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>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0056C19
          Length = 147739

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 23     ccgcgctccgtgtacctcgtcgactacgcctgct 56
              |||||| |||| ||||||||||||| ||||||||
Sbjct: 110275 ccgcgccccgtctacctcgtcgacttcgcctgct 110242
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>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0544H11
          Length = 178376

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 23     ccgcgctccgtgtacctcgtcgactacgcctgct 56
              |||||| |||| ||||||||||||| ||||||||
Sbjct: 161856 ccgcgccccgtctacctcgtcgacttcgcctgct 161823
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>dbj|AK067907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127I02, full
           insert sequence
          Length = 1929

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 23  ccgcgctccgtgtacctcgtcgactacgcctgct 56
           |||||| |||| ||||||||||||| ||||||||
Sbjct: 412 ccgcgccccgtctacctcgtcgacttcgcctgct 445
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 32      gtgtacctcgtcgactacgcctgct 56
               |||||||||||||||||| ||||||
Sbjct: 6272697 gtgtacctcgtcgactactcctgct 6272673



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                        
Query: 179     gagcggtccggtctcggggaggagacgtgcctgccccccgcgcaccacttcatcccg 235
               |||||||| || |||||||||||||| ||||| || || ||  |||||| |||||||
Sbjct: 6272568 gagcggtcggggctcggggaggagacctgcctcccgccggccaaccactacatcccg 6272512
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 32      gtgtacctcgtcgactacgcctgct 56
               |||||||||||||||||| ||||||
Sbjct: 6271910 gtgtacctcgtcgactactcctgct 6271886



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                        
Query: 179     gagcggtccggtctcggggaggagacgtgcctgccccccgcgcaccacttcatcccg 235
               |||||||| || |||||||||||||| ||||| || || ||  |||||| |||||||
Sbjct: 6271781 gagcggtcggggctcggggaggagacctgcctcccgccggccaaccactacatcccg 6271725
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>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11,
              complete sequence
          Length = 115403

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 32     gtgtacctcgtcgactacgcctgct 56
              |||||||||||||||||| ||||||
Sbjct: 111308 gtgtacctcgtcgactactcctgct 111284



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                       
Query: 179    gagcggtccggtctcggggaggagacgtgcctgccccccgcgcaccacttcatcccg 235
              |||||||| || |||||||||||||| ||||| || || ||  |||||| |||||||
Sbjct: 111179 gagcggtcggggctcggggaggagacctgcctcccgccggccaaccactacatcccg 111123
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>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0024O21, complete sequence
          Length = 155651

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 32    gtgtacctcgtcgactacgcctgct 56
             |||||||||||||||||| ||||||
Sbjct: 85905 gtgtacctcgtcgactactcctgct 85881



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 179   gagcggtccggtctcggggaggagacgtgcctgccccccgcgcaccacttcatcccg 235
             |||||||| || |||||||||||||| ||||| || || ||  |||||| |||||||
Sbjct: 85776 gagcggtcggggctcggggaggagacctgcctcccgccggccaaccactacatcccg 85720
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>dbj|AK106150.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H08, full
           insert sequence
          Length = 1892

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 179 gagcggtccggtctcggggaggagacgtgcctgccccccgcgcaccacttcatcccg 235
           |||||||| || |||||||||||||| ||||| || || ||  |||||| |||||||
Sbjct: 563 gagcggtcggggctcggggaggagacctgcctcccgccggccaaccactacatcccg 619



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 32  gtgtacctcgtcgactacgcctgct 56
           |||||||||||||||||| ||||||
Sbjct: 434 gtgtacctcgtcgactactcctgct 458
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>dbj|AK104714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H10, full
           insert sequence
          Length = 1892

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 179 gagcggtccggtctcggggaggagacgtgcctgccccccgcgcaccacttcatcccg 235
           |||||||| || |||||||||||||| ||||| || || ||  |||||| |||||||
Sbjct: 563 gagcggtcggggctcggggaggagacctgcctcccgccggccaaccactacatcccg 619



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 32  gtgtacctcgtcgactacgcctgct 56
           |||||||||||||||||| ||||||
Sbjct: 434 gtgtacctcgtcgactactcctgct 458
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>dbj|AK066587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074H08, full
           insert sequence
          Length = 1966

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 179 gagcggtccggtctcggggaggagacgtgcctgccccccgcgcaccacttcatcccg 235
           |||||||| || |||||||||||||| ||||| || || ||  |||||| |||||||
Sbjct: 564 gagcggtcggggctcggggaggagacctgcctcccgccggccaaccactacatcccg 620



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 32  gtgtacctcgtcgactacgcctgct 56
           |||||||||||||||||| ||||||
Sbjct: 435 gtgtacctcgtcgactactcctgct 459
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>ref|NM_196495.1| Oryza sativa (japonica cultivar-group) putative beta-ketoacyl-CoA
           synthase (OSJNBa0032I20.8), mRNA
          Length = 1572

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 169 gcggctgctggagcggtccggtctcggggagg 200
           |||| ||||||||||||| || ||||||||||
Sbjct: 423 gcggatgctggagcggtcggggctcggggagg 454
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 52      ctgcttccgcaccaagcccagcca 75
               ||||||| ||||||||||||||||
Sbjct: 3399807 ctgcttcggcaccaagcccagcca 3399830
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>gb|DQ429568.1| Sorghum propinquum locus pSB1120 genomic sequence
          Length = 781

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 31  cgtgtacctcgtcgactacgcctgcttccgcaccaagccc 70
           |||||||||||| || |||| |||||||||  ||||||||
Sbjct: 584 cgtgtacctcgtggagtacggctgcttccggcccaagccc 623
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>gb|AC182812.1| Gasterosteus aculeatus clone VMRC28-91C14, complete sequence
          Length = 136032

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     cgtcgactacgcctgcttcc 59
              ||||||||||||||||||||
Sbjct: 115500 cgtcgactacgcctgcttcc 115481
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 169      gcggctgctggagcggtccggtctcggggagg 200
                |||| ||||||||||||| || ||||||||||
Sbjct: 14051077 gcggatgctggagcggtcggggctcggggagg 14051046
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 78      gcgtccccttcggcaccttcctcg 101
               ||||||| ||||||||||||||||
Sbjct: 2286853 gcgtcccgttcggcaccttcctcg 2286876
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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 169   gcggctgctggagcggtccggtctcggggagg 200
             |||| ||||||||||||| || ||||||||||
Sbjct: 67206 gcggatgctggagcggtcggggctcggggagg 67175
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>gb|AY648560.1| Klebsiella pneumoniae strain M5a1 Orf1 gene, partial cds; LysR-like
           regulatory protein (mhbR), putative 3-hydroxybenzoate
           transporter (mhbT), gentisate 1,2-dioxygenase (mhbD),
           fumarylpyruvate hydrolase (mhbH), maleylpyruvate
           isomerase (mhbI), 3-hydroxybenzoate-6-hydroxylase
           (mhbM), and Orf2 genes, complete cds; and Orf3 gene,
           partial cds
          Length = 8216

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 gctggtgacgttcatcgagg 131
           ||||||||||||||||||||
Sbjct: 456 gctggtgacgttcatcgagg 475
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 169      gcggctgctggagcggtccggtctcggggagg 200
                |||| ||||||||||||| || ||||||||||
Sbjct: 14059319 gcggatgctggagcggtcggggctcggggagg 14059288


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,304,801
Number of Sequences: 3902068
Number of extensions: 1304801
Number of successful extensions: 20978
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20735
Number of HSP's gapped (non-prelim): 239
length of query: 235
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 213
effective length of database: 17,147,199,772
effective search space: 3652353551436
effective search space used: 3652353551436
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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