ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast42d10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DBP_HUMAN (Q10586) D site-binding protein (Albumin D box-binding... 28 6.9

>DBP_HUMAN (Q10586) D site-binding protein (Albumin D box-binding protein)|
           (Albumin D-element-binding protein) (TAXREB302)
          Length = 325

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 7/41 (17%)
 Frame = +2

Query: 314 GPHPAGDDDAPHRPK---GALRGRAGPIPR----VPLLWRR 415
           G   AG  DAP       G+ RGR GP+P      PLLW R
Sbjct: 67  GLETAGPADAPAGAVVGGGSPRGRPGPVPAPGLLAPLLWER 107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.300    0.115    0.333 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,900,701
Number of Sequences: 219361
Number of extensions: 418461
Number of successful extensions: 855
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
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