ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast42d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MK14C_DROME (P83100) Putative mitogen-activated protein kinase 1... 29 5.8

>MK14C_DROME (P83100) Putative mitogen-activated protein kinase 14C (EC|
           2.7.11.24) (MAP kinase p38c)
          Length = 356

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
 Frame = -3

Query: 144 EEVRDVAHETV-----VHEAGVVHRRLLHRPQQLPIHGSDGARPLSLALS 10
           +E+R + ++ +     +H AGVVHR L  +P  + ++G+   R L   LS
Sbjct: 122 QEIRIILYQILRGLKYIHSAGVVHRDL--KPCNIAVNGNSEVRILDFGLS 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,068,008
Number of Sequences: 219361
Number of extensions: 462092
Number of successful extensions: 1310
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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