ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast42d03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196495.1| Oryza sativa (japonica cultivar-group) putative beta-ketoacyl-CoA synthase (OSJNBa0032I20.8), mRNA Length = 1572 Score = 190 bits (96), Expect = 3e-45 Identities = 177/204 (86%) Strand = Plus / Plus Query: 234 cgcgccggcgctggccatggcgtgctgggcggcggcgctggcggcgtacacgtacgcgtc 293 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | Sbjct: 225 cgcgccggcgctggcggtggcgtgctgggcggcggcgctggcggcgtacacctacgccgc 284 Query: 294 gtcgcggccgcagccggtctacctggtggacctggccgggtacaagccgccggcggagct 353 ||| || |||| || |||||||| | ||||| ||||| |||||| ||||| ||||| Sbjct: 285 gtcccgcccgcgccccgtctacctcatcgacctcgccggctacaaggcgccgcgggagca 344 Query: 354 ggaggcgtcgcgcgccaagaccatcgtccacttccagcggtgcgggcggttcagcgagca 413 |||||||||||||||||||| |||| ||||||| |||||||||||||||||||| | Sbjct: 345 cgaggcgtcgcgcgccaagacgatcgcccacttcgggcggtgcgggcggttcagcggcga 404 Query: 414 gagcatggcgttccagaagcggat 437 |||||||||||||||||||||||| Sbjct: 405 gagcatggcgttccagaagcggat 428 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 59 agctgctgaggacggtgaagcaggcgacgatggaccacgccggc 102 ||||| ||||||||||||||| |||||| | | ||||||||||| Sbjct: 11 agctggtgaggacggtgaagctggcgaccaagaaccacgccggc 54
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 190 bits (96), Expect = 3e-45 Identities = 177/204 (86%) Strand = Plus / Minus Query: 234 cgcgccggcgctggccatggcgtgctgggcggcggcgctggcggcgtacacgtacgcgtc 293 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | Sbjct: 14051275 cgcgccggcgctggcggtggcgtgctgggcggcggcgctggcggcgtacacctacgccgc 14051216 Query: 294 gtcgcggccgcagccggtctacctggtggacctggccgggtacaagccgccggcggagct 353 ||| || |||| || |||||||| | ||||| ||||| |||||| ||||| ||||| Sbjct: 14051215 gtcccgcccgcgccccgtctacctcatcgacctcgccggctacaaggcgccgcgggagca 14051156 Query: 354 ggaggcgtcgcgcgccaagaccatcgtccacttccagcggtgcgggcggttcagcgagca 413 |||||||||||||||||||| |||| ||||||| |||||||||||||||||||| | Sbjct: 14051155 cgaggcgtcgcgcgccaagacgatcgcccacttcgggcggtgcgggcggttcagcggcga 14051096 Query: 414 gagcatggcgttccagaagcggat 437 |||||||||||||||||||||||| Sbjct: 14051095 gagcatggcgttccagaagcggat 14051072 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 59 agctgctgaggacggtgaagcaggcgacgatggaccacgccggc 102 ||||| ||||||||||||||| |||||| | | ||||||||||| Sbjct: 14051489 agctggtgaggacggtgaagctggcgaccaagaaccacgccggc 14051446 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 177 gctgtcgacgctcacgccggacaaggcg 204 |||||||||||||||| || |||||||| Sbjct: 20670818 gctgtcgacgctcacgtcgcacaaggcg 20670845
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 190 bits (96), Expect = 3e-45 Identities = 177/204 (86%) Strand = Plus / Minus Query: 234 cgcgccggcgctggccatggcgtgctgggcggcggcgctggcggcgtacacgtacgcgtc 293 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | Sbjct: 67404 cgcgccggcgctggcggtggcgtgctgggcggcggcgctggcggcgtacacctacgccgc 67345 Query: 294 gtcgcggccgcagccggtctacctggtggacctggccgggtacaagccgccggcggagct 353 ||| || |||| || |||||||| | ||||| ||||| |||||| ||||| ||||| Sbjct: 67344 gtcccgcccgcgccccgtctacctcatcgacctcgccggctacaaggcgccgcgggagca 67285 Query: 354 ggaggcgtcgcgcgccaagaccatcgtccacttccagcggtgcgggcggttcagcgagca 413 |||||||||||||||||||| |||| ||||||| |||||||||||||||||||| | Sbjct: 67284 cgaggcgtcgcgcgccaagacgatcgcccacttcgggcggtgcgggcggttcagcggcga 67225 Query: 414 gagcatggcgttccagaagcggat 437 |||||||||||||||||||||||| Sbjct: 67224 gagcatggcgttccagaagcggat 67201 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 59 agctgctgaggacggtgaagcaggcgacgatggaccacgccggc 102 ||||| ||||||||||||||| |||||| | | ||||||||||| Sbjct: 67618 agctggtgaggacggtgaagctggcgaccaagaaccacgccggc 67575
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 190 bits (96), Expect = 3e-45 Identities = 177/204 (86%) Strand = Plus / Minus Query: 234 cgcgccggcgctggccatggcgtgctgggcggcggcgctggcggcgtacacgtacgcgtc 293 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | Sbjct: 14059517 cgcgccggcgctggcggtggcgtgctgggcggcggcgctggcggcgtacacctacgccgc 14059458 Query: 294 gtcgcggccgcagccggtctacctggtggacctggccgggtacaagccgccggcggagct 353 ||| || |||| || |||||||| | ||||| ||||| |||||| ||||| ||||| Sbjct: 14059457 gtcccgcccgcgccccgtctacctcatcgacctcgccggctacaaggcgccgcgggagca 14059398 Query: 354 ggaggcgtcgcgcgccaagaccatcgtccacttccagcggtgcgggcggttcagcgagca 413 |||||||||||||||||||| |||| ||||||| |||||||||||||||||||| | Sbjct: 14059397 cgaggcgtcgcgcgccaagacgatcgcccacttcgggcggtgcgggcggttcagcggcga 14059338 Query: 414 gagcatggcgttccagaagcggat 437 |||||||||||||||||||||||| Sbjct: 14059337 gagcatggcgttccagaagcggat 14059314 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 59 agctgctgaggacggtgaagcaggcgacgatggaccacgccggc 102 ||||| ||||||||||||||| |||||| | | ||||||||||| Sbjct: 14059731 agctggtgaggacggtgaagctggcgaccaagaaccacgccggc 14059688 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 177 gctgtcgacgctcacgccggacaaggcg 204 |||||||||||||||| || |||||||| Sbjct: 20682090 gctgtcgacgctcacgtcgcacaaggcg 20682117
>gb|AY108266.1| Zea mays PCO146059 mRNA sequence Length = 561 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 355 gaggcgtcgcgcgccaagaccatcgtccacttccagcggtgcgggcggttcagcgagcag 414 ||||| || ||||||||||| |||| ||||||| ||||||||||||||||||||| || Sbjct: 362 gaggcctcccgcgccaagacgatcgcccacttcgggcggtgcgggcggttcagcgacgag 421 Query: 415 agcatggcgttccagaagcggat 437 ||||||||||||||||||||||| Sbjct: 422 agcatggcgttccagaagcggat 444
>ref|NM_187760.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 273 ggcggcgtacacgtacgcgtcgtcgcggccgcagccggtctacctggtggacctggccgg 332 |||||||||| ||||||| ||||||||||| |||||| |||||||||||||| ||||| Sbjct: 219 ggcggcgtacgcgtacgccatgtcgcggccgcggccggtgtacctggtggacctcgccgg 278 Query: 333 gtacaagccgccggcggagctggaggcgtcgcgcgccaagaccatc 378 |||||||||| ||||| || |||||| |||||||| || ||||| Sbjct: 279 gtacaagccggcggcgtcgcacgaggcgacgcgcgccgagtccatc 324
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 273 ggcggcgtacacgtacgcgtcgtcgcggccgcagccggtctacctggtggacctggccgg 332 |||||||||| ||||||| ||||||||||| |||||| |||||||||||||| ||||| Sbjct: 3384633 ggcggcgtacgcgtacgccatgtcgcggccgcggccggtgtacctggtggacctcgccgg 3384692 Query: 333 gtacaagccgccggcggagctggaggcgtcgcgcgccaagaccatc 378 |||||||||| ||||| || |||||| |||||||| || ||||| Sbjct: 3384693 gtacaagccggcggcgtcgcacgaggcgacgcgcgccgagtccatc 3384738
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 273 ggcggcgtacacgtacgcgtcgtcgcggccgcagccggtctacctggtggacctggccgg 332 |||||||||| ||||||| ||||||||||| |||||| |||||||||||||| ||||| Sbjct: 44581 ggcggcgtacgcgtacgccatgtcgcggccgcggccggtgtacctggtggacctcgccgg 44522 Query: 333 gtacaagccgccggcggagctggaggcgtcgcgcgccaagaccatc 378 |||||||||| ||||| || |||||| |||||||| || ||||| Sbjct: 44521 gtacaagccggcggcgtcgcacgaggcgacgcgcgccgagtccatc 44476
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 273 ggcggcgtacacgtacgcgtcgtcgcggccgcagccggtctacctggtggacctggccgg 332 |||||||||| ||||||| ||||||||||| |||||| |||||||||||||| ||||| Sbjct: 3384744 ggcggcgtacgcgtacgccatgtcgcggccgcggccggtgtacctggtggacctcgccgg 3384803 Query: 333 gtacaagccgccggcggagctggaggcgtcgcgcgccaagaccatc 378 |||||||||| ||||| || |||||| |||||||| || ||||| Sbjct: 3384804 gtacaagccggcggcgtcgcacgaggcgacgcgcgccgagtccatc 3384849
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 65 tgaggacggtgaagcaggcgacgatg 90 |||||||||||||||||||||||||| Sbjct: 1611828 tgaggacggtgaagcaggcgacgatg 1611803 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 344 cggcggagctggaggcgtcgcgcgc 368 ||||||||||||||||| ||||||| Sbjct: 2785757 cggcggagctggaggcgacgcgcgc 2785733 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cgtgaacgcgccggcgctgg 247 |||||||||||||||||||| Sbjct: 4169500 cgtgaacgcgccggcgctgg 4169481
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 tcacgctgctcgccgtggtggcgccgcag 177 |||||||||||| |||||||||||||||| Sbjct: 1994783 tcacgctgctcgacgtggtggcgccgcag 1994811
>gb|AY530039.1| Uncultured bacterium clone envL1N04 formaldehyde activating enzyme (fae) gene, partial cds Length = 238 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 152 cgctgctcgccgtggtggcgccg 174 ||||||||||||||||||||||| Sbjct: 28 cgctgctcgccgtggtggcgccg 50
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 264 ggcggcgctggcggcgtacacgt 286 ||||||||||||||||||||||| Sbjct: 3451390 ggcggcgctggcggcgtacacgt 3451368
>gb|DQ173649.1| Uncultured bacterium clone BACfae11 formaldehyde activating enzyme (fae) gene, partial cds Length = 234 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 152 cgctgctcgccgtggtggcgccg 174 ||||||||||||||||||||||| Sbjct: 56 cgctgctcgccgtggtggcgccg 78
>gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030E22, complete sequence Length = 135468 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 261 ggcggcggcgctggcggcgtac 282 |||||||||||||||||||||| Sbjct: 61168 ggcggcggcgctggcggcgtac 61147
>gb|AY566301.1| Zea mays 4-coumarate coenzyme A ligase (4CL) mRNA, complete cds Length = 1668 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 gccgccggcggagctggaggcg 360 |||||||||||||||||||||| Sbjct: 1383 gccgccggcggagctggaggcg 1404
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 261 ggcggcggcgctggcggcgtac 282 |||||||||||||||||||||| Sbjct: 22504023 ggcggcggcgctggcggcgtac 22504002
>gb|AY105108.1| Zea mays PCO063262 mRNA sequence Length = 2090 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 gccgccggcggagctggaggcg 360 |||||||||||||||||||||| Sbjct: 1535 gccgccggcggagctggaggcg 1556
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 261 ggcggcggcgctggcggcgtac 282 |||||||||||||||||||||| Sbjct: 22813934 ggcggcggcgctggcggcgtac 22813913
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gcgccggcgctggccatggcg 255 ||||||||||||||||||||| Sbjct: 3320588 gcgccggcgctggccatggcg 3320608
>ref|XM_971393.1| PREDICTED: Tribolium castaneum hypothetical protein LOC664470 (LOC664470), mRNA Length = 825 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 catggcgtgctgggcggcggc 269 ||||||||||||||||||||| Sbjct: 570 catggcgtgctgggcggcggc 550
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 270 gctggcggcgtacacgtacgcgtcg 294 ||||||||||||||||||| ||||| Sbjct: 9191 gctggcggcgtacacgtactcgtcg 9167
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene cluster, partial sequence Length = 127559 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctgggcggcggcgctggcgg 277 ||||||||||||||||||||| Sbjct: 58397 gctgggcggcggcgctggcgg 58417
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 ccggacaaggcgcgcgccctg 213 ||||||||||||||||||||| Sbjct: 2796800 ccggacaaggcgcgcgccctg 2796820
>gb|AF021262.1|AF021262 Streptomyces roseosporus daptomycin biosynthetic protein subunit gene, partial cds Length = 7914 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctgggcggcggcgctggcgg 277 ||||||||||||||||||||| Sbjct: 4325 gctgggcggcggcgctggcgg 4345
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ggtctacctggtggacctggc 329 ||||||||||||||||||||| Sbjct: 578673 ggtctacctggtggacctggc 578653
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ggccatggcgtgctgggcgg 265 |||||||||||||||||||| Sbjct: 1408558 ggccatggcgtgctgggcgg 1408539
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cgcgccggcgctggccatgg 253 |||||||||||||||||||| Sbjct: 394691 cgcgccggcgctggccatgg 394710
>gb|DQ067053.1| Uncultured bacterium clone pLWFae-12 formaldehyde-activating enzyme (fae) gene, partial cds Length = 306 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 cacgctgctcgccgtggtggcgcc 173 ||||||||| |||||||||||||| Sbjct: 90 cacgctgctggccgtggtggcgcc 113
>ref|XM_493792.1| Oryza sativa (japonica cultivar-group), Ozsa8511 predicted mRNA Length = 1017 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gccatggcgtgctgggcggcggcg 270 |||||||||||| ||||||||||| Sbjct: 851 gccatggcgtgcggggcggcggcg 828
>ref|XM_466920.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1807 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 1168 cgccggcctcatgtaccacc 1149
>ref|XM_507511.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1 mRNA Length = 1701 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 1045 cgccggcctcatgtaccacc 1026
>ref|XM_507510.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1 mRNA Length = 1704 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 1048 cgccggcctcatgtaccacc 1029
>ref|XM_506875.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1 mRNA Length = 1720 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 1050 cgccggcctcatgtaccacc 1031
>ref|XM_466759.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3140 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 345 ggcggagctggaggcgtcgcgcgccaag 372 ||||| |||||||||| ||||||||||| Sbjct: 141 ggcggcgctggaggcggcgcgcgccaag 168
>ref|NM_197594.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0015I11.12), mRNA Length = 936 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 177 gctgtcgacgctcacgccggacaaggcg 204 |||||||||||||||| || |||||||| Sbjct: 24 gctgtcgacgctcacgtcgcacaaggcg 51
>ref|XM_479203.1| Oryza sativa (japonica cultivar-group), mRNA Length = 165 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cgtacacgtacgcgtcgtcg 297 |||||||||||||||||||| Sbjct: 63 cgtacacgtacgcgtcgtcg 82
>ref|XM_478176.1| Oryza sativa (japonica cultivar-group), mRNA Length = 909 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 acgcgccggcgctggccatggcgt 256 ||||||||||| |||||||||||| Sbjct: 836 acgcgccggcgttggccatggcgt 813
>ref|XM_473109.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4233 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 345 ggcggagctggaggcgtcgcgcgccaag 372 ||||| |||||||||| ||||||||||| Sbjct: 6 ggcggcgctggaggcggcgcgcgccaag 33
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggcggcggcgctggcggcgt 280 |||||||||||||||||||| Sbjct: 2474311 ggcggcggcgctggcggcgt 2474292
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cgctgctcgccgtggtggcg 171 |||||||||||||||||||| Sbjct: 894288 cgctgctcgccgtggtggcg 894307
>ref|XM_595972.1| PREDICTED: Bos taurus similar to Catechol O-methyltransferase (LOC517795), mRNA Length = 777 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 agcagagcatggcgttccagaagc 433 ||||||||||||| |||||||||| Sbjct: 602 agcagagcatggccttccagaagc 579
>gb|AY576796.1| Actinoplanes phage phiAsp2, complete genome Length = 58638 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcacgccggacaaggcgcgc 207 |||||||||||||||||||| Sbjct: 2739 tcacgccggacaaggcgcgc 2758
>ref|XM_959005.1| Neurospora crassa OR74A hypothetical protein (NCU02104.1) partial mRNA Length = 1422 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gggcggcggcgctggcggcg 279 |||||||||||||||||||| Sbjct: 1206 gggcggcggcgctggcggcg 1225
>ref|XM_329293.1| Neurospora crassa OR74A hypothetical protein (NCU02104.1) partial mRNA Length = 1422 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gggcggcggcgctggcggcg 279 |||||||||||||||||||| Sbjct: 1206 gggcggcggcgctggcggcg 1225
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 ccatggcgtgctgggcggcggcgc 271 |||||||||||||||||| ||||| Sbjct: 1331377 ccatggcgtgctgggcggtggcgc 1331400
>gb|AE007239.1| Sinorhizobium meliloti 1021 plasmid pSymA section 45 of 121 of the complete plasmid sequence Length = 10029 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 gctggaggcgtcgcgcgcca 370 |||||||||||||||||||| Sbjct: 5386 gctggaggcgtcgcgcgcca 5405
>ref|NM_020728.1| Homo sapiens family with sequence similarity 62 (C2 domain containing) member B (FAM62B), mRNA Length = 5956 Score = 40.1 bits (20), Expect = 5.9 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 139 ctcctcgcggtcacgctgctcgccgtggtggcgccgcagc 178 ||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 400 ctcctcgcgctcgcgctgctcgcc-tggtgtcgccgcagc 438
>gb|AY702654.1| Chlamydomonas reinhardtii Set3p (Set3) mRNA, complete cds Length = 3059 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gggcggcggcgctggcggcg 279 |||||||||||||||||||| Sbjct: 2216 gggcggcggcgctggcggcg 2235
>ref|XM_544059.2| PREDICTED: Canis familiaris similar to NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1) (LOC486929), mRNA Length = 1065 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gggcggcggcgctggcggcg 279 |||||||||||||||||||| Sbjct: 491 gggcggcggcgctggcggcg 510
>gb|AY368150.1| Homo sapiens KIAA1228 protein mRNA, complete cds Length = 5956 Score = 40.1 bits (20), Expect = 5.9 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 139 ctcctcgcggtcacgctgctcgccgtggtggcgccgcagc 178 ||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 400 ctcctcgcgctcgcgctgctcgcc-tggtgtcgccgcagc 438
>ref|XM_965425.1| PREDICTED: Tribolium castaneum similar to CG32405-PA (LOC659093), mRNA Length = 312 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 tgctgggcggcggcgctggcggcg 279 ||||||| |||||||||||||||| Sbjct: 59 tgctggggggcggcgctggcggcg 36
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 cgcgtcgtcgcggccgcagc 307 |||||||||||||||||||| Sbjct: 3401710 cgcgtcgtcgcggccgcagc 3401691
>emb|X16881.1|GGCDC2 Chicken mRNA for CDC2 protein kinase Length = 1182 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gctgggcggcggcgctggcg 276 |||||||||||||||||||| Sbjct: 29 gctgggcggcggcgctggcg 48
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 345 ggcggagctggaggcgtcgcgcgccaag 372 ||||| |||||||||| ||||||||||| Sbjct: 118299 ggcggcgctggaggcggcgcgcgccaag 118272
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 345 ggcggagctggaggcgtcgcgcgccaag 372 ||||| |||||||||| ||||||||||| Sbjct: 60919 ggcggcgctggaggcggcgcgcgccaag 60892
>emb|AJ431260.1|UNK431260 Uncultured bacterium plasmid pB4 complete genome Length = 79370 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 tgctgggcggcggcgctggcggcg 279 ||||||||||||||| |||||||| Sbjct: 51756 tgctgggcggcggcggtggcggcg 51779
>emb|AL645855.25| Mouse DNA sequence from clone RP23-122N23 on chromosome 11 Contains a novel gene, complete sequence Length = 203914 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ggggagagagctagagatag 27 |||||||||||||||||||| Sbjct: 83283 ggggagagagctagagatag 83302
>ref|NM_205314.1| Gallus gallus cell division cycle 2, G1 to S and G2 to M (CDC2), mRNA Length = 1182 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gctgggcggcggcgctggcg 276 |||||||||||||||||||| Sbjct: 29 gctgggcggcggcgctggcg 48
>gb|AY119178.1| Drosophila melanogaster RH66281 full insert cDNA Length = 1886 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tcctcgcggtcacgctgctc 159 |||||||||||||||||||| Sbjct: 995 tcctcgcggtcacgctgctc 976
>gb|AE005950.1| Caulobacter crescentus CB15 section 276 of 359 of the complete genome Length = 12754 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gggcggcggcgctggcggcg 279 |||||||||||||||||||| Sbjct: 4835 gggcggcggcgctggcggcg 4816
>gb|AE012120.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 28 of 460 of the complete genome Length = 11505 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cgccggacaaggcgcgcgcc 210 |||||||||||||||||||| Sbjct: 8923 cgccggacaaggcgcgcgcc 8904
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 tgctgggcggcggcgctggcggcg 279 |||||||||||||||||| ||||| Sbjct: 161933 tgctgggcggcggcgctgtcggcg 161910
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgccggcgctggccatggcg 255 |||||||||||||||||||| Sbjct: 1820071 cgccggcgctggccatggcg 1820052
>ref|NM_057558.3| Drosophila melanogaster Crystallin CG16963-RA (Cry), mRNA Length = 1923 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tcctcgcggtcacgctgctc 159 |||||||||||||||||||| Sbjct: 996 tcctcgcggtcacgctgctc 977
>gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complete sequence Length = 201215 Score = 40.1 bits (20), Expect = 5.9 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 139 ctcctcgcggtcacgctgctcgccgtggtggcgccgcagc 178 ||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 196714 ctcctcgcgctcgcgctgctcgcc-tggtgtcgccgcagc 196676
>gb|AC011065.6| Drosophila melanogaster, chromosome 2L, region 33B-33B, BAC clone BACR37P12, complete sequence Length = 181103 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tcctcgcggtcacgctgctc 159 |||||||||||||||||||| Sbjct: 86768 tcctcgcggtcacgctgctc 86749
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 177 gctgtcgacgctcacgccggacaaggcg 204 |||||||||||||||| || |||||||| Sbjct: 72270 gctgtcgacgctcacgtcgcacaaggcg 72297
>emb|CR389164.1| Gallus gallus finished cDNA, clone ChEST22p1 Length = 706 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gctgggcggcggcgctggcg 276 |||||||||||||||||||| Sbjct: 21 gctgggcggcggcgctggcg 40
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gctgggcggcggcgctggcg 276 |||||||||||||||||||| Sbjct: 3990338 gctgggcggcggcgctggcg 3990319
>gb|AC156447.2| Volvox carteri clone JGIAOBO-33C7, complete sequence Length = 34892 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gggcggcggcgctggcggcg 279 |||||||||||||||||||| Sbjct: 15590 gggcggcggcgctggcggcg 15571
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cgccggacaaggcgcgcgcc 210 |||||||||||||||||||| Sbjct: 307625 cgccggacaaggcgcgcgcc 307606
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 345 ggcggagctggaggcgtcgcgcgccaag 372 ||||| |||||||||| ||||||||||| Sbjct: 25334360 ggcggcgctggaggcggcgcgcgccaag 25334333
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 cgtacacgtacgcgtcgtcg 297 |||||||||||||||||||| Sbjct: 25806740 cgtacacgtacgcgtcgtcg 25806721 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 acgcgccggcgctggccatggcgt 256 ||||||||||| |||||||||||| Sbjct: 18213002 acgcgccggcgttggccatggcgt 18212979
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 25467652 cgccggcctcatgtaccacc 25467633 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 345 ggcggagctggaggcgtcgcgcgccaag 372 ||||| |||||||||| ||||||||||| Sbjct: 24521225 ggcggcgctggaggcggcgcgcgccaag 24521198
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gccatggcgtgctgggcggcggcg 270 |||||||||||| ||||||||||| Sbjct: 9567189 gccatggcgtgcggggcggcggcg 9567212
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gccatggcgtgctgggcggcggcg 270 |||||||||||| ||||||||||| Sbjct: 100618 gccatggcgtgcggggcggcggcg 100641
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gccatggcgtgctgggcggcggcg 270 |||||||||||| ||||||||||| Sbjct: 5192 gccatggcgtgcggggcggcggcg 5215
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 cgcgccggcgctggccatgg 253 |||||||||||||||||||| Sbjct: 3801320 cgcgccggcgctggccatgg 3801301
>dbj|AP004051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1218_C12 Length = 105861 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 acgcgccggcgctggccatggcgt 256 ||||||||||| |||||||||||| Sbjct: 16245 acgcgccggcgttggccatggcgt 16222
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 123314 cgccggcctcatgtaccacc 123295
>dbj|AP004069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1626_B09 Length = 58749 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 12202 cgccggcctcatgtaccacc 12183
>gb|AE005123.1| Halobacterium sp. NRC-1 section 154 of 170 of the complete genome Length = 11202 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cggcggcgctggcggcgtac 282 |||||||||||||||||||| Sbjct: 10710 cggcggcgctggcggcgtac 10691
>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1014_H03 Length = 132696 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 345 ggcggagctggaggcgtcgcgcgccaag 372 ||||| |||||||||| ||||||||||| Sbjct: 35326 ggcggcgctggaggcggcgcgcgccaag 35299
>emb|Y15938.2|PACAPSID Porcine astrovirus gene for capsid protein precursor, genomic RNA Length = 2459 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 ggcgtcgcgcgccaagacca 376 |||||||||||||||||||| Sbjct: 572 ggcgtcgcgcgccaagacca 553
>dbj|AK120120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025O20, full insert sequence Length = 4796 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 345 ggcggagctggaggcgtcgcgcgccaag 372 ||||| |||||||||| ||||||||||| Sbjct: 140 ggcggcgctggaggcggcgcgcgccaag 167
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 cgtacacgtacgcgtcgtcg 297 |||||||||||||||||||| Sbjct: 123902 cgtacacgtacgcgtcgtcg 123883
>dbj|AK106111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D11, full insert sequence Length = 1701 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 1045 cgccggcctcatgtaccacc 1026
>dbj|AK104431.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-H12, full insert sequence Length = 1704 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 1048 cgccggcctcatgtaccacc 1029
>dbj|AK104329.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E12, full insert sequence Length = 1700 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 1045 cgccggcctcatgtaccacc 1026
>dbj|AK071869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118K14, full insert sequence Length = 1807 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 1168 cgccggcctcatgtaccacc 1149
>dbj|AK069959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G19, full insert sequence Length = 1720 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccggcctcatgtaccacc 115 |||||||||||||||||||| Sbjct: 1049 cgccggcctcatgtaccacc 1030
>dbj|AK067382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102B13, full insert sequence Length = 4538 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 345 ggcggagctggaggcgtcgcgcgccaag 372 ||||| |||||||||| ||||||||||| Sbjct: 141 ggcggcgctggaggcggcgcgcgccaag 168
>dbj|AK067306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100C22, full insert sequence Length = 5032 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 345 ggcggagctggaggcgtcgcgcgccaag 372 ||||| |||||||||| ||||||||||| Sbjct: 156 ggcggcgctggaggcggcgcgcgccaag 183
>gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43 of 83 of the complete sequence Length = 265341 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tcctcgcggtcacgctgctc 159 |||||||||||||||||||| Sbjct: 121537 tcctcgcggtcacgctgctc 121518
>gb|AY898810.1| Chlamydomonas incerta homoserine dehydrogenase (HSD) gene, partial cds; and inositol monophosphatase (IMP) and GSP1 (GSP1) genes, complete cds Length = 10638 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 ggcgtgctgggcggcggcgctggcggcg 279 ||||| ||||||||||||| |||||||| Sbjct: 9726 ggcgtcctgggcggcggcgttggcggcg 9753
>gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, region 33A3-33B2, P1 clones DS06189, DS04362, and DS07071, complete sequence Length = 170056 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tcctcgcggtcacgctgctc 159 |||||||||||||||||||| Sbjct: 18241 tcctcgcggtcacgctgctc 18260
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 gccggcgctggccatggcgt 256 |||||||||||||||||||| Sbjct: 577773 gccggcgctggccatggcgt 577792
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 accatggatcggcagctgct 65 |||||||||||||||||||| Sbjct: 561487 accatggatcggcagctgct 561468
>emb|Y18453.1|DM18453 Drosophila melanogaster dcy gene, exons 1 and 2 Length = 2998 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tcctcgcggtcacgctgctc 159 |||||||||||||||||||| Sbjct: 2070 tcctcgcggtcacgctgctc 2051
>dbj|AB037272.1| Porcine astrovirus gene for capsid protein precursor, complete cds Length = 2730 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 ggcgtcgcgcgccaagacca 376 |||||||||||||||||||| Sbjct: 851 ggcgtcgcgcgccaagacca 832
>dbj|AB033054.2| Homo sapiens mRNA for KIAA1228 protein, partial cds Length = 5742 Score = 40.1 bits (20), Expect = 5.9 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 139 ctcctcgcggtcacgctgctcgccgtggtggcgccgcagc 178 ||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 186 ctcctcgcgctcgcgctgctcgcc-tggtgtcgccgcagc 224 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,939,802 Number of Sequences: 3902068 Number of extensions: 2939802 Number of successful extensions: 73907 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 69640 Number of HSP's gapped (non-prelim): 4271 length of query: 437 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 415 effective length of database: 17,147,199,772 effective search space: 7116087905380 effective search space used: 7116087905380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
