ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast42d01 |
|---|---|
| Clone Library Name | barley_pub |
>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC| 2.3.1.-) (DBTNBT) Length = 441 Score = 61.2 bits (147), Expect = 1e-09 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 3/114 (2%) Frame = +2 Query: 95 SSSFKVTRISEGAVKPASETPDHTLPLAWVDRYPTHRGLVESMHIFRSGADAAPG---VI 265 S+ F V + V P+ +P T+ L+ VD RG+ ++ +F + + + +I Sbjct: 6 STDFHVKKFDPVMVAPSLPSPKATVQLSVVDSLTICRGIFNTLLVFNAPDNISADPVKII 65 Query: 266 REALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAAAECSLEDVRFLE 427 REAL K L +++PLAGR+ E G + CT DG F EA E ++ +R L+ Sbjct: 66 REALSKVLVYYFPLAGRL-RSKEIGELEVECTGDGALFVEAMVEDTISVLRDLD 118
>T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 50.8 bits (120), Expect = 1e-06 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 7/113 (6%) Frame = +2 Query: 89 MASSSFKVTRISEGAVKPASETPDHTLPLAWVDRYPTHRGLVESMHIFRSGADAAPGV-- 262 M + V I + V P+ P TL L+ +D P RG + + + + + + + Sbjct: 1 MEKTDLHVNLIEKVMVGPSPPLPKTTLQLSSIDNLPGVRGSIFNALLIYNASPSPTMISA 60 Query: 263 -----IREALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAAAECSL 406 IREAL K L ++ P AGR+ + E G + CT +G F EA A+ L Sbjct: 61 DPAKPIREALAKILVYYPPFAGRL-RETENGDLEVECTGEGAMFLEAMADNEL 112
>DBBT_TAXCU (Q9FPW3) 2-alpha-hydroxytaxane 2-O-benzoyltransferase (EC| 2.3.1.166) (TBT) (2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase) (DBBT) Length = 440 Score = 50.8 bits (120), Expect = 1e-06 Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Frame = +2 Query: 104 FKVTRISEGAVKPASETPDHTLPLAWVDRYPTHRGLVESMHIF----RSGADAAPG-VIR 268 F V I V P ++P + L L+ +D RGL + ++ R A P IR Sbjct: 4 FNVDMIERVIVAPCLQSPKNILHLSPIDNKT--RGLTNILSVYNASQRVSVSADPAKTIR 61 Query: 269 EALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAAAECSL 406 EAL K L ++ P AGR+ E G + CT +G F EA A+ L Sbjct: 62 EALSKVLVYYPPFAGRL-RNTENGDLEVECTGEGAVFVEAMADNDL 106
>DBAT_TAXCU (Q9M6E2) 10-deacetylbaccatin III 10-O-acetyltransferase (EC| 2.3.1.167) (DBAT) Length = 440 Score = 50.8 bits (120), Expect = 1e-06 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 4/108 (3%) Frame = +2 Query: 95 SSSFKVTRISEGAVKPASETPDHTLPLAWVDRYPTHRGLVESMHIFRSGADAAP----GV 262 S+ F V + V P+ +P L L+ +D P R + + + + +D V Sbjct: 4 STEFVVRSLERVMVAPSQPSPKAFLQLSTLDNLPGVRENIFNTLLVYNASDRVSVDPAKV 63 Query: 263 IREALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAAAECSL 406 IR+AL K L ++ P AGR+ + E G + CT +G F EA A+ L Sbjct: 64 IRQALSKVLVYYSPFAGRL-RKKENGDLEVECTGEGALFVEAMADTDL 110
>T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 48.9 bits (115), Expect = 5e-06 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 8/99 (8%) Frame = +2 Query: 134 VKPASETPDHTLPLAWVDRYPTHRGLV-ESMHIFRSG-------ADAAPGVIREALGKAL 289 V P+ P TL L+ +D P RG + ++ I+ + AD A +IREAL K L Sbjct: 16 VGPSLPLPKTTLQLSSIDNLPGVRGSIFNALLIYNASPSPTMVSADPAK-LIREALAKIL 74 Query: 290 AFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAAAECSL 406 ++ P AGR+ + E G + CT +G F EA A+ L Sbjct: 75 VYYPPFAGRL-RETENGDLEVECTGEGAMFLEAMADNEL 112
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 45.8 bits (107), Expect = 4e-05 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Frame = +2 Query: 134 VKPASETPDHTLPLAWVD---RYP-THRGLV----------ESMHIFRSGADAAPGVIRE 271 V+PA ETP+ +L L+ +D R P +H G V +++H S A ++ E Sbjct: 11 VRPAEETPNKSLWLSNIDMILRTPYSHTGAVLIYKQPDNNEDNIHPSSSMYFDA-NILIE 69 Query: 272 ALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAAAECSLED 412 AL KAL FYP+AGR+ ++ I C A+G F EA + LED Sbjct: 70 ALSKALVPFYPMAGRLKINGDR--YEIDCNAEGALFVEAESSHVLED 114
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 45.1 bits (105), Expect = 7e-05 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Frame = +2 Query: 134 VKPASETPDHTLPLAWVD---RYP-THRGLV----------ESMHIFRSGADAAPGVIRE 271 V+PA ETP+ +L L+ +D R P +H G V +++H S A ++ E Sbjct: 11 VRPAEETPNKSLWLSKIDMILRTPYSHTGAVLIYKQPDNNEDNIHPSSSMYFDA-NILIE 69 Query: 272 ALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAAAECSLED 412 AL KAL +YP+AGR+ ++ I C A+G F EA + LED Sbjct: 70 ALSKALVPYYPMAGRLKINGDR--YEIDCNAEGALFVEAESSHVLED 114
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 42.0 bits (97), Expect = 6e-04 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 13/106 (12%) Frame = +2 Query: 134 VKPASETPDHTLPLAWVD---RYP-THRGLV---------ESMHIFRSGADAAPGVIREA 274 V+PA ETP+ +L L+ +D R P +H G V E S ++ EA Sbjct: 11 VRPAEETPNKSLWLSKIDMILRTPYSHTGAVLIYKQPDNNEDNIQPSSSMYFDANILIEA 70 Query: 275 LGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAAAECSLED 412 L KAL +YP+AGR+ ++ I C +G F EA + LED Sbjct: 71 LSKALVPYYPMAGRLKINGDR--YEIDCNGEGALFVEAESSHVLED 114
>YACK_RHIME (Q9X447) Hypothetical 80.6 kDa protein in ackA 5'region (ORFA)| Length = 733 Score = 30.8 bits (68), Expect = 1.5 Identities = 22/52 (42%), Positives = 28/52 (53%) Frame = +2 Query: 200 HRGLVESMHIFRSGADAAPGVIREALGKALAFFYPLAGRIVEQPEKGCPAIR 355 H L+E+ I AD A G IREAL +AL F GR+ E+G A+R Sbjct: 587 HHALLENK-IAALKADMAKGGIREALARALLFVGMARGRV---DERGFEAVR 634
>GCM1_MOUSE (P70348) Chorion-specific transcription factor GCMa (Glial cells| missing homolog 1) (GCM motif protein 1) (mGCMa) (mGCM1) Length = 436 Score = 30.0 bits (66), Expect = 2.5 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +2 Query: 8 QLKLKAPEPRPKTPTRTIANTRLKEAAMASSSFKVTRISEGAVK--PASETPDHTLPLAW 181 Q K + PRP+T A +K+ MAS+S + A K PA +LPL W Sbjct: 147 QSKGEHDHPRPETKLEAEARRAMKKVHMASASNSLRMKGRPAAKALPAEIPSQGSLPLTW 206
>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)| Length = 474 Score = 29.3 bits (64), Expect = 4.2 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%) Frame = +2 Query: 83 AAMASSSFKVTRISEGAVKPASETPDH--TLPLAWVDRYPTHRGLVESMHIFRSGADAAP 256 A M S++ +V IS+ +KP + TP L+ +D+ V + + + A + Sbjct: 2 ATMYSAAVEV--ISKETIKPTTPTPSQLKNFNLSLLDQCFPLYYYVPIILFYPATAANST 59 Query: 257 G---------VIREALGKALAFFYPLAGRIVE 325 G +++ +L K L FYP+AGR+++ Sbjct: 60 GSSNHHDDLDLLKSSLSKTLVHFYPMAGRMID 91
>GSA_RHOBA (Q7UPM9) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 439 Score = 28.9 bits (63), Expect = 5.5 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 324 STMRPASG*KKASALPSASRITPGAASAPDR 232 S RPA+G K +A AS + PG ++P R Sbjct: 8 SAARPAAGPKSVAAFQRASALMPGGVNSPAR 38
>SPL14_ARATH (Q8RY95) Squamosa promoter-binding-like protein 14 (SPL1-related| protein 2) Length = 1035 Score = 28.5 bits (62), Expect = 7.2 Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 1/31 (3%) Frame = +2 Query: 248 AAPGVIREALGKALAFFYPLAGRIVE-QPEK 337 AAP I ++LG+ +YP++ R+V+ QP++ Sbjct: 9 AAPMFIHQSLGRKRDLYYPMSNRLVQSQPQR 39
>END4_ENTFA (Q834D0) Probable endonuclease 4 (EC 3.1.21.2) (Endonuclease IV)| (Endodeoxyribonuclease IV) Length = 297 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -1 Query: 319 DAPRQRVEEGQRL-AQRLADHAGGRVGAGPE 230 D RQ +E Q L A ++ H G VGAGPE Sbjct: 89 DFLRQEIERAQALGATQITLHPGAHVGAGPE 119
>MTFA_VIBVY (Q7MN36) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 359 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/60 (26%), Positives = 28/60 (46%) Frame = -2 Query: 249 ASAPDRKMCIDSTRPRWVGYRSTHASGSVWSGVSDAGFTAPSEIRVTLKLDDAMAASLRR 70 A P +C ++ + GY +H + + G+ F A + R TLKL++A + R Sbjct: 141 AKKPVFHLCFVASGHCFAGYSYSHNNSRFFMGIPRLKFPADAPSRSTLKLEEAFHVFIPR 200
>MTFA_VIBVU (Q8DFB2) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 359 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/60 (26%), Positives = 28/60 (46%) Frame = -2 Query: 249 ASAPDRKMCIDSTRPRWVGYRSTHASGSVWSGVSDAGFTAPSEIRVTLKLDDAMAASLRR 70 A P +C ++ + GY +H + + G+ F A + R TLKL++A + R Sbjct: 141 AKKPVFHLCFVASGHCFAGYSYSHNNSRFFMGIPRLKFPADAPSRSTLKLEEAFHVFIPR 200
>HID_DROME (Q24106) Cell death protein W (Protein head involution defective)| (Protein wrinkled) Length = 410 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/45 (26%), Positives = 28/45 (62%) Frame = +2 Query: 32 PRPKTPTRTIANTRLKEAAMASSSFKVTRISEGAVKPASETPDHT 166 P P + + +++++ + A+ +S+S + S+GA AS++P+ T Sbjct: 32 PLPSSASSSVSSSGVSSASASSASSSSSASSDGASSAASQSPNTT 76
>OTX1_HUMAN (P32242) Homeobox protein OTX1| Length = 354 Score = 28.1 bits (61), Expect = 9.4 Identities = 23/83 (27%), Positives = 36/83 (43%) Frame = -2 Query: 360 VQRMAGHPFSGCSTMRPASG*KKASALPSASRITPGAASAPDRKMCIDSTRPRWVGYRST 181 V+ +G SG T S +S+ S+S P AA+A + ST Sbjct: 115 VRESSGSESSGQFTPPAVSSSASSSSSASSSSANPAAAAAAG----LGGNPVAAASSLST 170 Query: 180 HASGSVWSGVSDAGFTAPSEIRV 112 A+ S+WS S + +AP+ + V Sbjct: 171 PAASSIWSPASISPGSAPASVSV 193
>DYHC_DICDI (P34036) Dynein heavy chain, cytosolic (DYHC)| Length = 4725 Score = 28.1 bits (61), Expect = 9.4 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +2 Query: 158 DHTLPLAWVDRYPTHRGLVESMHIFRSGADAAPG 259 DH+ WVD YPT L+ S ++ + D A G Sbjct: 1794 DHSKYSEWVDNYPTQLVLLTSQIVWSTQVDQALG 1827
>AP180_HUMAN (O60641) Clathrin coat assembly protein AP180 (Clathrin| coat-associated protein AP180) (91 kDa synaptosomal-associated protein) Length = 907 Score = 28.1 bits (61), Expect = 9.4 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 17/62 (27%) Frame = +2 Query: 23 APEPRPKTPTRTIANTRLKEA-----------------AMASSSFKVTRISEGAVKPASE 151 APEP P T T IA + A A+S + SEGA PA+ Sbjct: 405 APEPTPPTTTAEIATASASASTTTTVTAVTAEVDLFGDAFAASPGEAPAASEGAAAPATP 464 Query: 152 TP 157 TP Sbjct: 465 TP 466
>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1| Length = 2042 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 9/74 (12%) Frame = +2 Query: 26 PEPRPKTPTRTIANTRLKEAAMASSSFKVTRISEGAVKPASETPDHTL---------PLA 178 PEP+P TPT L AA + + + + V P P + P + Sbjct: 1427 PEPQPSTPTDQPITPELTSAATRGRTRRSSVKTPEPVVPTDPEPQPSTPTDQPITPKPTS 1486 Query: 179 WVDRYPTHRGLVES 220 W R HR V++ Sbjct: 1487 WATRGQAHRSSVKT 1500
>AROA_AERSA (Q03321) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 28.1 bits (61), Expect = 9.4 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = +2 Query: 44 TPTRTIANTRLKEA----AMASSSFKVTRISEGAVKPASETPDHTLPLAWVDRYPTHR 205 T R I N R+KE AMA+ K+ EG + + TP L A +D Y HR Sbjct: 329 TSIRNIYNWRVKETDRLHAMATDVRKLGVSEEGDLHYITVTPPTQLKHAEIDTYKHHR 386 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.138 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,572,911 Number of Sequences: 219361 Number of extensions: 739684 Number of successful extensions: 2318 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2268 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2305 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
