ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast42c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NO93_SOYBN (Q02921) Early nodulin 93 (N-93) 77 3e-14

>NO93_SOYBN (Q02921) Early nodulin 93 (N-93)|
          Length = 105

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 38/84 (45%), Positives = 47/84 (55%)
 Frame = +2

Query: 116 ANPENKLALAKRCSREXXXXXXXXXXXXXXXXXXXXXXXXRMLPWAKANLNPTGQALIIC 295
           A+ + KLA AKRCS E                        RMLPWA+ANLN T QALII 
Sbjct: 14  ASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTAQALIIS 73

Query: 296 TVAGMAYFVAADKTILSLARRHSY 367
           T    AYF+ ADKT+L+ AR++S+
Sbjct: 74  TATAAAYFIVADKTVLATARKNSF 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,247,441
Number of Sequences: 219361
Number of extensions: 577725
Number of successful extensions: 1635
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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