| Clone Name | bast42c03 |
|---|---|
| Clone Library Name | barley_pub |
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 73.9 bits (180), Expect = 2e-13 Identities = 36/78 (46%), Positives = 49/78 (62%) Frame = +1 Query: 199 DSTVDTGNNNQIGTTLRSDFPPYGRDMPGGARATGRFGNGRLPPDFISEALGLPPLVPAY 378 DS DTGNNN + T ++S++ PYG D ATGRF NG + D++++ +G+ +VPAY Sbjct: 210 DSVFDTGNNNNLETKIKSNYRPYGMDFKFRV-ATGRFSNGMVASDYLAKYMGVKEIVPAY 268 Query: 379 LDPAYGIGDFARGVCFAS 432 LDP D GV FAS Sbjct: 269 LDPKIQPNDLLTGVSFAS 286
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 73.2 bits (178), Expect = 3e-13 Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 6/84 (7%) Frame = +1 Query: 199 DSTVDTGNNNQIGTTLRSDFPPYGRDMPGGARATGRFGNGRLPPDFISEALGLPPLVPAY 378 DS DTGNNN + T L+ ++ PYG D P G ATGRF NGR+ D+IS+ LG+ +VPAY Sbjct: 131 DSIFDTGNNNNLDTKLKCNYRPYGMDFPMGV-ATGRFSNGRVASDYISKYLGVKEIVPAY 189 Query: 379 LDP------AYGIGDFARGVCFAS 432 +D D GV FAS Sbjct: 190 VDKKLQQNNELQQSDLLTGVSFAS 213
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 41.2 bits (95), Expect = 0.001 Identities = 31/79 (39%), Positives = 41/79 (51%) Frame = +1 Query: 199 DSTVDTGNNNQIGTTLRSDFPPYGRDMPGGARATGRFGNGRLPPDFISEALGLPPLVPAY 378 DS DTG + PP+G G GR+ +GRL DFI+E+LGLP L A+ Sbjct: 36 DSNSDTGG---LSAAFGQAGPPHGSSFFGSP--AGRYCDGRLVIDFIAESLGLPYL-SAF 89 Query: 379 LDPAYGIGDFARGVCFASA 435 LD +F+ G FA+A Sbjct: 90 LDSVG--SNFSHGANFATA 106
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 40.4 bits (93), Expect = 0.002 Identities = 32/79 (40%), Positives = 39/79 (49%) Frame = +1 Query: 199 DSTVDTGNNNQIGTTLRSDFPPYGRDMPGGARATGRFGNGRLPPDFISEALGLPPLVPAY 378 DS DTG L PPYG R+TGR+ +GRL DFI+E+ LP L P Y Sbjct: 40 DSNSDTGGKAAAFYPLN---PPYGETF--FHRSTGRYSDGRLIIDFIAESFNLPYLSP-Y 93 Query: 379 LDPAYGIGDFARGVCFASA 435 L +F G FA+A Sbjct: 94 LSSLG--SNFKHGADFATA 110
>FEOB2_PORGI (Q7MVL1) Ferrous iron transport protein B homolog| Length = 725 Score = 29.6 bits (65), Expect = 3.4 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 Query: 313 NGRLPPDFISEALGLPPLVPAYLDPAYGIG 402 NGR P + + L P VPAYL GIG Sbjct: 471 NGRWPTQILLATIFLTPAVPAYLRGVIGIG 500
>AGT23_ARATH (Q9SR86) Alanine--glyoxylate aminotransferase 2 homolog 3,| mitochondrial precursor (EC 2.6.1.44) (Beta-alanine-pyruvate aminotransferase 3) Length = 481 Score = 29.3 bits (64), Expect = 4.4 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +1 Query: 304 RFGNGRLPPDFISEAL----GLPPLVPAYLDPAYGIGDFARGVCFA 429 +FG FI E++ G+ L P YL AY I A GVC A Sbjct: 249 QFGTSGQVAGFIGESIQGVGGIVELAPGYLPAAYDIVRKAGGVCIA 294
>CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity factor 6| Length = 548 Score = 28.9 bits (63), Expect = 5.8 Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 7/58 (12%) Frame = +1 Query: 235 GTTLRSDFPPYGRDM-------PGGARATGRFGNGRLPPDFISEALGLPPLVPAYLDP 387 G R FPP GR PGG R G G G PP F + G+ P P P Sbjct: 191 GINARLPFPPGGRGRGRFPTSGPGGDRFPGPAGPGGPPPPF---SAGMTPPRPPMCPP 245
>RAVR1_HUMAN (Q8IY67) Protein raver-1| Length = 606 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 4/49 (8%) Frame = +1 Query: 262 PYGRDMPGGARATGRFGN----GRLPPDFISEALGLPPLVPAYLDPAYG 396 P G PG A G G LPP+ PPL+P+ L PA G Sbjct: 400 PLGALQPGAQPANPLLGELPAGGGLPPELPPRRGKPPPLLPSVLGPAGG 448
>KUP1_CHRVO (Q7NUG7) Probable potassium transport system protein kup 1| Length = 640 Score = 28.1 bits (61), Expect = 9.9 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%) Frame = +1 Query: 283 GGARATGRFGNGRLP--PDFIS---EALGLPPLVPAYLDPAYGIG 402 G AR T R+G P P+ ++ EALGLPPL P L +Y +G Sbjct: 547 GMARVTARYGYMEEPDVPEAMARAAEALGLPPLEP--LSTSYYLG 589
>OXAL2_PONPY (Q5R7D0) Probable inner membrane protein OXA1L2, mitochondrial| precursor Length = 334 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 320 RPLPNRPV-ARAPPGMSRP*GGKSDRSVVPIWLLLPVSTVES 198 RPLP + AR PP P G + R +P+W + PVS V + Sbjct: 11 RPLPALQLWARDPPLAPVPTSG-AKRPTLPVWAVTPVSAVHA 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,772,796 Number of Sequences: 219361 Number of extensions: 645429 Number of successful extensions: 2473 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2376 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2459 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)