ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast42b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477191.1| Oryza sativa (japonica cultivar-group), mRNA 291 1e-75
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
3dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
4dbj|AK105808.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
5gb|AY022620.1| Oryza sativa microsatellite MRG4945 containing (C... 111 2e-21
6ref|XM_470106.1| Oryza sativa (japonica cultivar-group), mRNA 101 2e-18
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 101 2e-18
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
9gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genom... 101 2e-18
10dbj|AK121940.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
11gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 42 1.6
12emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, com... 42 1.6
13gb|AC015804.14| Homo sapiens chromosome 17, clone RP11-637C24, c... 42 1.6
14gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 1.6
15gb|AC116712.11| Mus musculus chromosome 1, clone RP23-105A17, co... 40 6.2
16ref|XM_955615.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
17ref|XM_326848.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
18gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC... 40 6.2
19emb|X74410.1|ACFIX A.caulinodans genes fixN, fixO, fixQ, fixP an... 40 6.2
20emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen... 40 6.2
21emb|AL513465.1|NCB13A5 Neurospora crassa DNA linkage group V BAC... 40 6.2
22emb|AL353822.2|NC15E6 Neurospora crassa DNA linkage group V Cosm... 40 6.2
23gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete seq... 40 6.2
24dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 6.2
25gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.2
26gb|AC013448.7| Homo sapiens BAC clone RP11-551D18 from 2, comple... 40 6.2
27ref|XM_321450.2| Anopheles gambiae str. PEST ENSANGP00000022179 ... 40 6.2
28gb|AC004828.2|AC004828 Homo sapiens clone DJ0514A23, complete se... 40 6.2
29dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.2
30dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 6.2 
>ref|XM_477191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1275

 Score =  291 bits (147), Expect = 1e-75
 Identities = 266/306 (86%), Gaps = 6/306 (1%)
 Strand = Plus / Plus

                                                                       
Query: 158 ggcgcagacgctgggcaacgtggtggtgtccattgtgggcacgggggtgctcggcctgcc 217
           ||||||||||||||| ||||||||||||||||| ||||| || |||||||||||||| ||
Sbjct: 90  ggcgcagacgctggggaacgtggtggtgtccatcgtggggaccggggtgctcggcctccc 149

                                                                       
Query: 218 ctacgccttccgagccgccggctgggtcgccggatccctcggcgttgccgccgcaggatt 277
           |||||| |||||  ||||||||||||||||||| || |||||||| |||||||| |||| 
Sbjct: 150 ctacgcgttccgcaccgccggctgggtcgccggctcgctcggcgtcgccgccgccggatg 209

                                                                       
Query: 278 cgccatgctctactgcatgctcctcctcgtggactgtagagataaattgcaagaggaaga 337
           ||||| |||||||||||||||||||||||| ||||| |||||||||||| ||||| ||||
Sbjct: 210 cgccacgctctactgcatgctcctcctcgttgactgcagagataaattggaagagaaaga 269

                                                                       
Query: 338 aactgatgaacccaagaat------tatacatatggagatttgggtgagaagtgctttgg 391
           | |||| ||| || |  ||      ||||||||||| ||||||||||| ||||| |||||
Sbjct: 270 atctgaagaaacctaccatggtcactatacatatggtgatttgggtgaaaagtgttttgg 329

                                                                       
Query: 392 cactattggtcgatgcttgacggaaattctcattcttgtctcacaagcaggtggttctgt 451
           |||||| |||||||||||||| ||||| ||||| ||||| || ||||||||||| |||||
Sbjct: 330 cactataggtcgatgcttgacagaaatcctcatccttgtttcccaagcaggtggatctgt 389

                 
Query: 452 agctta 457
           ||||||
Sbjct: 390 agctta 395
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  188 bits (95), Expect = 1e-44
 Identities = 137/151 (90%)
 Strand = Plus / Plus

                                                                           
Query: 158     ggcgcagacgctgggcaacgtggtggtgtccattgtgggcacgggggtgctcggcctgcc 217
               ||||||||||||||| ||||||||||||||||| ||||| || |||||||||||||| ||
Sbjct: 7342695 ggcgcagacgctggggaacgtggtggtgtccatcgtggggaccggggtgctcggcctccc 7342754

                                                                           
Query: 218     ctacgccttccgagccgccggctgggtcgccggatccctcggcgttgccgccgcaggatt 277
               |||||| |||||  ||||||||||||||||||| || |||||||| |||||||| |||| 
Sbjct: 7342755 ctacgcgttccgcaccgccggctgggtcgccggctcgctcggcgtcgccgccgccggatg 7342814

                                              
Query: 278     cgccatgctctactgcatgctcctcctcgtg 308
               ||||| |||||||||||||||||||||||||
Sbjct: 7342815 cgccacgctctactgcatgctcctcctcgtg 7342845



 Score =  121 bits (61), Expect = 2e-24
 Identities = 91/101 (90%)
 Strand = Plus / Plus

                                                                           
Query: 357     tatacatatggagatttgggtgagaagtgctttggcactattggtcgatgcttgacggaa 416
               ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||| |||
Sbjct: 7343658 tatacatatggtgatttgggtgaaaagtgttttggcactataggtcgatgcttgacagaa 7343717

                                                        
Query: 417     attctcattcttgtctcacaagcaggtggttctgtagctta 457
               || ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 7343718 atcctcatccttgtttcccaagcaggtggatctgtagctta 7343758
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>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0086N05
          Length = 163670

 Score =  188 bits (95), Expect = 1e-44
 Identities = 137/151 (90%)
 Strand = Plus / Plus

                                                                         
Query: 158   ggcgcagacgctgggcaacgtggtggtgtccattgtgggcacgggggtgctcggcctgcc 217
             ||||||||||||||| ||||||||||||||||| ||||| || |||||||||||||| ||
Sbjct: 69376 ggcgcagacgctggggaacgtggtggtgtccatcgtggggaccggggtgctcggcctccc 69435

                                                                         
Query: 218   ctacgccttccgagccgccggctgggtcgccggatccctcggcgttgccgccgcaggatt 277
             |||||| |||||  ||||||||||||||||||| || |||||||| |||||||| |||| 
Sbjct: 69436 ctacgcgttccgcaccgccggctgggtcgccggctcgctcggcgtcgccgccgccggatg 69495

                                            
Query: 278   cgccatgctctactgcatgctcctcctcgtg 308
             ||||| |||||||||||||||||||||||||
Sbjct: 69496 cgccacgctctactgcatgctcctcctcgtg 69526



 Score =  121 bits (61), Expect = 2e-24
 Identities = 91/101 (90%)
 Strand = Plus / Plus

                                                                         
Query: 357   tatacatatggagatttgggtgagaagtgctttggcactattggtcgatgcttgacggaa 416
             ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||| |||
Sbjct: 70339 tatacatatggtgatttgggtgaaaagtgttttggcactataggtcgatgcttgacagaa 70398

                                                      
Query: 417   attctcattcttgtctcacaagcaggtggttctgtagctta 457
             || ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 70399 atcctcatccttgtttcccaagcaggtggatctgtagctta 70439
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>dbj|AK105808.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B09, full
           insert sequence
          Length = 1381

 Score =  176 bits (89), Expect = 4e-41
 Identities = 178/208 (85%), Gaps = 6/208 (2%)
 Strand = Plus / Plus

                                                                       
Query: 256 tcggcgttgccgccgcaggattcgccatgctctactgcatgctcctcctcgtggactgta 315
           ||||||| |||||||| |||| ||||| |||||||||||||||||||||||| ||||| |
Sbjct: 43  tcggcgtcgccgccgccggatgcgccacgctctactgcatgctcctcctcgttgactgca 102

                                                                       
Query: 316 gagataaattgcaagaggaagaaactgatgaacccaagaat------tatacatatggag 369
           ||||||||||| ||||| ||||| |||| ||| || |  ||      ||||||||||| |
Sbjct: 103 gagataaattggaagagaaagaatctgaagaaacctaccatggtcactatacatatggtg 162

                                                                       
Query: 370 atttgggtgagaagtgctttggcactattggtcgatgcttgacggaaattctcattcttg 429
           |||||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||| ||||
Sbjct: 163 atttgggtgaaaagtgttttggcactataggtcgatgcttgacagaaatcctcatccttg 222

                                       
Query: 430 tctcacaagcaggtggttctgtagctta 457
           | || ||||||||||| |||||||||||
Sbjct: 223 tttcccaagcaggtggatctgtagctta 250
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>gb|AY022620.1| Oryza sativa microsatellite MRG4945 containing (CAC)X8, closest to
           marker C1023A, genomic sequence
          Length = 224

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 217 cctacgccttccgagccgccggctgggtcgccggatccctcggcgttgccgccgcaggat 276
           ||||||| |||||  ||||||||||||||||||| || |||||||| |||||||| ||||
Sbjct: 1   cctacgcgttccgcaccgccggctgggtcgccggctcgctcggcgtcgccgccgccggat 60

                                           
Query: 277 tcgccatgctctactgcatgctcctcctcgtg 308
            ||||| |||||||||||||||||||||||||
Sbjct: 61  gcgccacgctctactgcatgctcctcctcgtg 92
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>ref|XM_470106.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1283

 Score =  101 bits (51), Expect = 2e-18
 Identities = 123/147 (83%)
 Strand = Plus / Plus

                                                                       
Query: 158 ggcgcagacgctgggcaacgtggtggtgtccattgtgggcacgggggtgctcggcctgcc 217
           ||||||||||||||||||| | || || ||||| || ||||| || ||||||||||| ||
Sbjct: 80  ggcgcagacgctgggcaacatcgtcgtctccatcgtcggcaccggcgtgctcggcctccc 139

                                                                       
Query: 218 ctacgccttccgagccgccggctgggtcgccggatccctcggcgttgccgccgcaggatt 277
           ||||||||||||  || |||||||| |||||||| | |||||||| |||| ||| ||   
Sbjct: 140 ctacgccttccgcacctccggctggctcgccggagctctcggcgtcgccggcgccggcgc 199

                                      
Query: 278 cgccatgctctactgcatgctcctcct 304
           |||||   |||||||||||||||||||
Sbjct: 200 cgccaccttctactgcatgctcctcct 226
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  101 bits (51), Expect = 2e-18
 Identities = 123/147 (83%)
 Strand = Plus / Plus

                                                                            
Query: 158      ggcgcagacgctgggcaacgtggtggtgtccattgtgggcacgggggtgctcggcctgcc 217
                ||||||||||||||||||| | || || ||||| || ||||| || ||||||||||| ||
Sbjct: 33967567 ggcgcagacgctgggcaacatcgtcgtctccatcgtcggcaccggcgtgctcggcctccc 33967626

                                                                            
Query: 218      ctacgccttccgagccgccggctgggtcgccggatccctcggcgttgccgccgcaggatt 277
                ||||||||||||  || |||||||| |||||||| | |||||||| |||| ||| ||   
Sbjct: 33967627 ctacgccttccgcacctccggctggctcgccggagctctcggcgtcgccggcgccggcgc 33967686

                                           
Query: 278      cgccatgctctactgcatgctcctcct 304
                |||||   |||||||||||||||||||
Sbjct: 33967687 cgccaccttctactgcatgctcctcct 33967713
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  101 bits (51), Expect = 2e-18
 Identities = 123/147 (83%)
 Strand = Plus / Plus

                                                                            
Query: 158      ggcgcagacgctgggcaacgtggtggtgtccattgtgggcacgggggtgctcggcctgcc 217
                ||||||||||||||||||| | || || ||||| || ||||| || ||||||||||| ||
Sbjct: 34058039 ggcgcagacgctgggcaacatcgtcgtctccatcgtcggcaccggcgtgctcggcctccc 34058098

                                                                            
Query: 218      ctacgccttccgagccgccggctgggtcgccggatccctcggcgttgccgccgcaggatt 277
                ||||||||||||  || |||||||| |||||||| | |||||||| |||| ||| ||   
Sbjct: 34058099 ctacgccttccgcacctccggctggctcgccggagctctcggcgtcgccggcgccggcgc 34058158

                                           
Query: 278      cgccatgctctactgcatgctcctcct 304
                |||||   |||||||||||||||||||
Sbjct: 34058159 cgccaccttctactgcatgctcctcct 34058185
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>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete
             sequence
          Length = 172337

 Score =  101 bits (51), Expect = 2e-18
 Identities = 123/147 (83%)
 Strand = Plus / Minus

                                                                         
Query: 158   ggcgcagacgctgggcaacgtggtggtgtccattgtgggcacgggggtgctcggcctgcc 217
             ||||||||||||||||||| | || || ||||| || ||||| || ||||||||||| ||
Sbjct: 90124 ggcgcagacgctgggcaacatcgtcgtctccatcgtcggcaccggcgtgctcggcctccc 90065

                                                                         
Query: 218   ctacgccttccgagccgccggctgggtcgccggatccctcggcgttgccgccgcaggatt 277
             ||||||||||||  || |||||||| |||||||| | |||||||| |||| ||| ||   
Sbjct: 90064 ctacgccttccgcacctccggctggctcgccggagctctcggcgtcgccggcgccggcgc 90005

                                        
Query: 278   cgccatgctctactgcatgctcctcct 304
             |||||   |||||||||||||||||||
Sbjct: 90004 cgccaccttctactgcatgctcctcct 89978
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>dbj|AK121940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D18, full
           insert sequence
          Length = 1515

 Score =  101 bits (51), Expect = 2e-18
 Identities = 123/147 (83%)
 Strand = Plus / Plus

                                                                       
Query: 158 ggcgcagacgctgggcaacgtggtggtgtccattgtgggcacgggggtgctcggcctgcc 217
           ||||||||||||||||||| | || || ||||| || ||||| || ||||||||||| ||
Sbjct: 93  ggcgcagacgctgggcaacatcgtcgtctccatcgtcggcaccggcgtgctcggcctccc 152

                                                                       
Query: 218 ctacgccttccgagccgccggctgggtcgccggatccctcggcgttgccgccgcaggatt 277
           ||||||||||||  || |||||||| |||||||| | |||||||| |||| ||| ||   
Sbjct: 153 ctacgccttccgcacctccggctggctcgccggagctctcggcgtcgccggcgccggcgc 212

                                      
Query: 278 cgccatgctctactgcatgctcctcct 304
           |||||   |||||||||||||||||||
Sbjct: 213 cgccaccttctactgcatgctcctcct 239
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>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 115    gggaggacgggagagggcgtggaggcgggggag 147
              ||||||| ||||| ||||| |||||||||||||
Sbjct: 116988 gggaggaggggagggggcggggaggcgggggag 116956



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 115  gggaggacgggagagggcgtggaggcgggggag 147
            ||||||| ||||| ||||| |||||||||||||
Sbjct: 6542 gggaggaggggagggggcggggaggcgggggag 6574
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>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence
          Length = 197615

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 208   tcggcctgccctacgccttcc 228
             |||||||||||||||||||||
Sbjct: 31845 tcggcctgccctacgccttcc 31865
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>gb|AC015804.14| Homo sapiens chromosome 17, clone RP11-637C24, complete sequence
          Length = 200452

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 327    caagaggaagaaactgatgaa 347
              |||||||||||||||||||||
Sbjct: 190069 caagaggaagaaactgatgaa 190049
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 160     cgcagacgctgggcaacgtggtggt 184
               ||||||||||||||| |||||||||
Sbjct: 3342603 cgcagacgctgggcagcgtggtggt 3342579
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>gb|AC116712.11| Mus musculus chromosome 1, clone RP23-105A17, complete sequence
          Length = 179782

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ttgcaagaggaagaaactga 343
             ||||||||||||||||||||
Sbjct: 28116 ttgcaagaggaagaaactga 28097
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>ref|XM_955615.1| Neurospora crassa OR74A hypothetical protein (NCU01356.1) partial
           mRNA
          Length = 1626

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 123 gggagagggcgtggaggcgggggaggag 150
           ||||||||||| ||||| ||||||||||
Sbjct: 142 gggagagggcgaggaggagggggaggag 115
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>ref|XM_326848.1| Neurospora crassa OR74A hypothetical protein (NCU01356.1) partial
           mRNA
          Length = 1626

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 123 gggagagggcgtggaggcgggggaggag 150
           ||||||||||| ||||| ||||||||||
Sbjct: 142 gggagagggcgaggaggagggggaggag 115
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>gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC F26K24 genomic sequence,
             complete sequence
          Length = 100835

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   tactgcatgctcctcctcgt 307
             ||||||||||||||||||||
Sbjct: 59281 tactgcatgctcctcctcgt 59300
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>emb|X74410.1|ACFIX A.caulinodans genes fixN, fixO, fixQ, fixP and fixG
          Length = 4122

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  ctgggcgcagacgctgggca 174
            ||||||||||||||||||||
Sbjct: 1301 ctgggcgcagacgctgggca 1320
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>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   gacgctgggcaacgtggtgg 183
             ||||||||||||||||||||
Sbjct: 48134 gacgctgggcaacgtggtgg 48153
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>emb|AL513465.1|NCB13A5 Neurospora crassa DNA linkage group V BAC clone B13A5
          Length = 72305

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 123   gggagagggcgtggaggcgggggaggag 150
             ||||||||||| ||||| ||||||||||
Sbjct: 69482 gggagagggcgaggaggagggggaggag 69509
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>emb|AL353822.2|NC15E6 Neurospora crassa DNA linkage group V Cosmid contig 15E6
          Length = 61843

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 123   gggagagggcgtggaggcgggggaggag 150
             ||||||||||| ||||| ||||||||||
Sbjct: 44172 gggagagggcgaggaggagggggaggag 44145
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>gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete sequence
          Length = 128860

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   taaattgcaagaggaagaaa 339
             ||||||||||||||||||||
Sbjct: 70594 taaattgcaagaggaagaaa 70575
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    tcggcgttgccgccgcagga 275
              ||||||||||||||||||||
Sbjct: 850631 tcggcgttgccgccgcagga 850650
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 155     ctgggcgcagacgctgggca 174
               ||||||||||||||||||||
Sbjct: 2781889 ctgggcgcagacgctgggca 2781870
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>gb|AC013448.7| Homo sapiens BAC clone RP11-551D18 from 2, complete sequence
          Length = 129553

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ttgcaagaggaagaaactga 343
             ||||||||||||||||||||
Sbjct: 44485 ttgcaagaggaagaaactga 44466
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>ref|XM_321450.2| Anopheles gambiae str. PEST ENSANGP00000022179
           (ENSANGG00000019690), partial mRNA
          Length = 1821

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 47  gtcgccgccaccacggttgt 66
           ||||||||||||||||||||
Sbjct: 900 gtcgccgccaccacggttgt 881
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>gb|AC004828.2|AC004828 Homo sapiens clone DJ0514A23, complete sequence
          Length = 183249

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 414    gaaattctcattcttgtctcacaa 437
              ||||||||||||||||| ||||||
Sbjct: 121720 gaaattctcattcttgtttcacaa 121743
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>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    caagaggaagaaactgatga 346
              ||||||||||||||||||||
Sbjct: 136773 caagaggaagaaactgatga 136792
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>dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B5P9, LL56-APP
              region, complete sequence
          Length = 150681

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    caagaggaagaaactgatga 346
              ||||||||||||||||||||
Sbjct: 124996 caagaggaagaaactgatga 125015


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,534,234
Number of Sequences: 3902068
Number of extensions: 3534234
Number of successful extensions: 76861
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76529
Number of HSP's gapped (non-prelim): 327
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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