ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast42b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 214 2e-52
2gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome... 214 2e-52
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 214 2e-52
4dbj|AK063646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
5ref|XM_420078.1| PREDICTED: Gallus gallus similar to GalNAc alph... 42 1.5
6gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 1.5
7gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.5
8emb|AL159972.8| Human DNA sequence from clone RP11-157H4 on chro... 42 1.5
9emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.5
10gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.5
11gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.0
12gb|AC125252.7| Mus musculus chromosome 5, clone RP23-388M10, com... 40 6.0
13gb|BC101902.1| Rattus norvegicus sterol regulatory element bindi... 40 6.0
14gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.0
15ref|NM_033218.1| Mus musculus sterol regulatory element binding ... 40 6.0
16gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 6.0
17ref|XM_756491.1| Ustilago maydis 521 hypothetical protein (UM054... 40 6.0
18ref|XM_538511.2| PREDICTED: Canis familiaris similar to Neutral ... 40 6.0
19gb|AC104325.28| Mus musculus strain C57BL/6J clone rp23-204m3 ma... 40 6.0
20emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.0
21emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.0
22emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.0
23emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 40 6.0
24gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene clust... 40 6.0
25gb|AE012109.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.0
26gb|AF374267.1| Mus musculus sterol regulatory element binding pr... 40 6.0
27dbj|AK155857.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 6.0
28dbj|AK172219.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.0
29ref|NM_001033694.1| Rattus norvegicus sterol regulatory element ... 40 6.0
30gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.0
31gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.0
32gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.0
33dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
34gb|AC093133.3| Papio anubis clone RP41-57F8, complete sequence 40 6.0
35dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.0
36ref|NM_211761.1| Eremothecium gossypii AGR034Wp (AGR034W), mRNA 40 6.0
37gb|AC105358.7| Mus musculus chromosome 15, clone RP24-291F2, com... 40 6.0
38gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
39emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.0
40dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.0
41gb|AD000017.1|MSGY409 Mycobacterium tuberculosis sequence from c... 40 6.0 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  214 bits (108), Expect = 2e-52
 Identities = 156/172 (90%)
 Strand = Plus / Plus

                                                                            
Query: 267      gctgcgacgtcttcagcggcagctgggtccgcgatgtcgacggctccgcggcggagggct 326
                |||||||||||||||||||||||||||||||||| | || ||||  ||  |||| ||  |
Sbjct: 10078135 gctgcgacgtcttcagcggcagctgggtccgcgacgacggcggcggcggcgcggcggcgt 10078194

                                                                            
Query: 327      acaccgggtacaagtgcccggtcatcgacgcggagttcaactgccagctctatggccgcc 386
                ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 10078195 acaccgggtacaactgcccggtcatcgacgcggagttcaactgccagctgtacggccggc 10078254

                                                                    
Query: 387      cggactccgactacctccggtaccgctggaagccggccagctgcgagctacc 438
                ||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 10078255 cggactccgactacctccggtaccggtggaagccggccggctgcgagctacc 10078306



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 185      cacgccgtctcgctgtccgcctcggcgctcgccgtcgggctcgcgcggcgccaccgg 241
                |||||| |||||||| | |||||||||||| || ||||||| ||||| |||||||||
Sbjct: 10078062 cacgccttctcgctgccggcctcggcgctctccttcgggctagcgcgccgccaccgg 10078118
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>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0078C05, complete sequence
          Length = 122116

 Score =  214 bits (108), Expect = 2e-52
 Identities = 156/172 (90%)
 Strand = Plus / Plus

                                                                         
Query: 267   gctgcgacgtcttcagcggcagctgggtccgcgatgtcgacggctccgcggcggagggct 326
             |||||||||||||||||||||||||||||||||| | || ||||  ||  |||| ||  |
Sbjct: 23756 gctgcgacgtcttcagcggcagctgggtccgcgacgacggcggcggcggcgcggcggcgt 23815

                                                                         
Query: 327   acaccgggtacaagtgcccggtcatcgacgcggagttcaactgccagctctatggccgcc 386
             ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 23816 acaccgggtacaactgcccggtcatcgacgcggagttcaactgccagctgtacggccggc 23875

                                                                 
Query: 387   cggactccgactacctccggtaccgctggaagccggccagctgcgagctacc 438
             ||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 23876 cggactccgactacctccggtaccggtggaagccggccggctgcgagctacc 23927



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                      
Query: 185   cacgccgtctcgctgtccgcctcggcgctcgccgtcgggctcgcgcggcgccaccgg 241
             |||||| |||||||| | |||||||||||| || ||||||| ||||| |||||||||
Sbjct: 23683 cacgccttctcgctgccggcctcggcgctctccttcgggctagcgcgccgccaccgg 23739
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  214 bits (108), Expect = 2e-52
 Identities = 156/172 (90%)
 Strand = Plus / Plus

                                                                            
Query: 267      gctgcgacgtcttcagcggcagctgggtccgcgatgtcgacggctccgcggcggagggct 326
                |||||||||||||||||||||||||||||||||| | || ||||  ||  |||| ||  |
Sbjct: 10076256 gctgcgacgtcttcagcggcagctgggtccgcgacgacggcggcggcggcgcggcggcgt 10076315

                                                                            
Query: 327      acaccgggtacaagtgcccggtcatcgacgcggagttcaactgccagctctatggccgcc 386
                ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 10076316 acaccgggtacaactgcccggtcatcgacgcggagttcaactgccagctgtacggccggc 10076375

                                                                    
Query: 387      cggactccgactacctccggtaccgctggaagccggccagctgcgagctacc 438
                ||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 10076376 cggactccgactacctccggtaccggtggaagccggccggctgcgagctacc 10076427



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 185      cacgccgtctcgctgtccgcctcggcgctcgccgtcgggctcgcgcggcgccaccgg 241
                |||||| |||||||| | |||||||||||| || ||||||| ||||| |||||||||
Sbjct: 10076183 cacgccttctcgctgccggcctcggcgctctccttcgggctagcgcgccgccaccgg 10076239
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>dbj|AK063646.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-H07, full
           insert sequence
          Length = 1399

 Score =  214 bits (108), Expect = 2e-52
 Identities = 156/172 (90%)
 Strand = Plus / Plus

                                                                       
Query: 267 gctgcgacgtcttcagcggcagctgggtccgcgatgtcgacggctccgcggcggagggct 326
           |||||||||||||||||||||||||||||||||| | || ||||  ||  |||| ||  |
Sbjct: 162 gctgcgacgtcttcagcggcagctgggtccgcgacgacggcggcggcggcgcggcggcgt 221

                                                                       
Query: 327 acaccgggtacaagtgcccggtcatcgacgcggagttcaactgccagctctatggccgcc 386
           ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 222 acaccgggtacaactgcccggtcatcgacgcggagttcaactgccagctgtacggccggc 281

                                                               
Query: 387 cggactccgactacctccggtaccgctggaagccggccagctgcgagctacc 438
           ||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 282 cggactccgactacctccggtaccggtggaagccggccggctgcgagctacc 333



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 185 cacgccgtctcgctgtccgcctcggcgctcgccgtcgggctcgcgcggcgccaccgg 241
           |||||| |||||||| | |||||||||||| || ||||||| ||||| |||||||||
Sbjct: 89  cacgccttctcgctgccggcctcggcgctctccttcgggctagcgcgccgccaccgg 145
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>ref|XM_420078.1| PREDICTED: Gallus gallus similar to GalNAc alpha
           2,6-sialyltransferase (LOC422075), mRNA
          Length = 1958

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 165 tgctcgccgtgctgctgctcc 185
           |||||||||||||||||||||
Sbjct: 209 tgctcgccgtgctgctgctcc 229
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 211     gctcgccgtcgggctcgcgcg 231
               |||||||||||||||||||||
Sbjct: 2008851 gctcgccgtcgggctcgcgcg 2008831
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 209     gcgctcgccgtcgggctcgcg 229
               |||||||||||||||||||||
Sbjct: 2021096 gcgctcgccgtcgggctcgcg 2021076
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>emb|AL159972.8| Human DNA sequence from clone RP11-157H4 on chromosome 13 Contains part
              of the KLF12 gene for Kruppel-like factor 12, complete
              sequence
          Length = 149512

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 120    tctccttgtctttgtggaaga 140
              |||||||||||||||||||||
Sbjct: 102957 tctccttgtctttgtggaaga 102937
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 209    gcgctcgccgtcgggctcgcg 229
              |||||||||||||||||||||
Sbjct: 182559 gcgctcgccgtcgggctcgcg 182539
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 193     ctcgctgtccgcctcggcgct 213
               |||||||||||||||||||||
Sbjct: 1182395 ctcgctgtccgcctcggcgct 1182375
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 204     cctcggcgctcgccgtcgggctcg 227
               |||||||||||||| |||||||||
Sbjct: 2767747 cctcggcgctcgccttcgggctcg 2767770
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>gb|AC125252.7| Mus musculus chromosome 5, clone RP23-388M10, complete sequence
          Length = 212724

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    ctttccctctccttgtcttt 132
              ||||||||||||||||||||
Sbjct: 171864 ctttccctctccttgtcttt 171845
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>gb|BC101902.1| Rattus norvegicus sterol regulatory element binding factor 2
            (predicted), mRNA (cDNA clone MGC:124823 IMAGE:7934137),
            complete cds
          Length = 5060

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  ccgctggaagccggccagct 428
            ||||||||||||||||||||
Sbjct: 3155 ccgctggaagccggccagct 3136
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 60      tgatcgattcgtcggccggt 79
               ||||||||||||||||||||
Sbjct: 4297756 tgatcgattcgtcggccggt 4297775
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>ref|NM_033218.1| Mus musculus sterol regulatory element binding factor 2 (Srebf2),
            mRNA
          Length = 4570

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  ccgctggaagccggccagct 428
            ||||||||||||||||||||
Sbjct: 3140 ccgctggaagccggccagct 3121
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   tgctcgccgtgctgctgctc 184
             ||||||||||||||||||||
Sbjct: 15483 tgctcgccgtgctgctgctc 15502
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>ref|XM_756491.1| Ustilago maydis 521 hypothetical protein (UM05437.1) partial mRNA
          Length = 1878

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   cccaccgcagcaagagagtt 38
            ||||||||||||||||||||
Sbjct: 1692 cccaccgcagcaagagagtt 1711
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>ref|XM_538511.2| PREDICTED: Canis familiaris similar to Neutral amino acid
           transporter A (SATT) (Alanine/serine/cysteine/ threonine
           transporter) (ASCT1) (LOC481391), mRNA
          Length = 1590

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 cgcctcggcgctcgccgtcg 221
           ||||||||||||||||||||
Sbjct: 372 cgcctcggcgctcgccgtcg 391
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>gb|AC104325.28| Mus musculus strain C57BL/6J clone rp23-204m3 map 15, complete sequence
          Length = 224086

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   ccgctggaagccggccagct 428
             ||||||||||||||||||||
Sbjct: 48686 ccgctggaagccggccagct 48667
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>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13
          Length = 244800

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     tgatcgattcgtcggccggt 79
              ||||||||||||||||||||
Sbjct: 138701 tgatcgattcgtcggccggt 138720
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>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    cgcctcggcgctcgccgtcg 221
              ||||||||||||||||||||
Sbjct: 206465 cgcctcggcgctcgccgtcg 206484
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>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14
          Length = 278492

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     tgatcgattcgtcggccggt 79
              ||||||||||||||||||||
Sbjct: 174706 tgatcgattcgtcggccggt 174725
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>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 410    cgctggaagccggccagctg 429
              ||||||||||||||||||||
Sbjct: 254499 cgctggaagccggccagctg 254480
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>gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene cluster, complete sequence
          Length = 31310

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   gctcgccgtgctgctgctcc 185
             ||||||||||||||||||||
Sbjct: 21926 gctcgccgtgctgctgctcc 21945
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>gb|AE012109.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 17 of
            460 of the complete genome
          Length = 11866

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 405  ggtaccgctggaagccggcc 424
            ||||||||||||||||||||
Sbjct: 6247 ggtaccgctggaagccggcc 6266
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>gb|AF374267.1| Mus musculus sterol regulatory element binding protein 2 (Srebp2)
            mRNA, partial cds
          Length = 4158

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  ccgctggaagccggccagct 428
            ||||||||||||||||||||
Sbjct: 2993 ccgctggaagccggccagct 2974
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>dbj|AK155857.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F730307I05
            product:sterol regulatory element binding factor 2, full
            insert sequence
          Length = 4044

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  ccgctggaagccggccagct 428
            ||||||||||||||||||||
Sbjct: 3088 ccgctggaagccggccagct 3069
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>dbj|AK172219.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830106O06 product:sterol regulatory
            element binding factor 2, full insert sequence
          Length = 4995

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  ccgctggaagccggccagct 428
            ||||||||||||||||||||
Sbjct: 3149 ccgctggaagccggccagct 3130
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>ref|NM_001033694.1| Rattus norvegicus sterol regulatory element binding factor 2
            (predicted) (Srebf2_predicted), mRNA
          Length = 5060

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  ccgctggaagccggccagct 428
            ||||||||||||||||||||
Sbjct: 3155 ccgctggaagccggccagct 3136
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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    tcgacggctccgcggcggag 322
              ||||||||||||||||||||
Sbjct: 773202 tcgacggctccgcggcggag 773221
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    ggtaccgctggaagccggcc 424
              ||||||||||||||||||||
Sbjct: 181679 ggtaccgctggaagccggcc 181698
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 210     cgctcgccgtcgggctcgcg 229
               ||||||||||||||||||||
Sbjct: 2869644 cgctcgccgtcgggctcgcg 2869625
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 105     ggcctcgcctttccctctcc 124
               ||||||||||||||||||||
Sbjct: 1800296 ggcctcgcctttccctctcc 1800277
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>gb|AC093133.3| Papio anubis clone RP41-57F8, complete sequence
          Length = 177993

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   cgggctcgcgcggcgccacc 239
             ||||||||||||||||||||
Sbjct: 91964 cgggctcgcgcggcgccacc 91983
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 165     tgctcgccgtgctgctgctc 184
               ||||||||||||||||||||
Sbjct: 8707645 tgctcgccgtgctgctgctc 8707626
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>ref|NM_211761.1| Eremothecium gossypii AGR034Wp (AGR034W), mRNA
          Length = 480

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 303 tcgacggctccgcggcggag 322
           ||||||||||||||||||||
Sbjct: 431 tcgacggctccgcggcggag 450
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>gb|AC105358.7| Mus musculus chromosome 15, clone RP24-291F2, complete sequence
          Length = 179508

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   ccgctggaagccggccagct 428
             ||||||||||||||||||||
Sbjct: 80404 ccgctggaagccggccagct 80423
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 105     ggcctcgcctttccctctcc 124
               ||||||||||||||||||||
Sbjct: 1800274 ggcctcgcctttccctctcc 1800255
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>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132026

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   ggcctcgcctttccctctcc 124
             ||||||||||||||||||||
Sbjct: 40186 ggcctcgcctttccctctcc 40205
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 164     gtgctcgccgtgctgctgct 183
               ||||||||||||||||||||
Sbjct: 1778770 gtgctcgccgtgctgctgct 1778789
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>gb|AD000017.1|MSGY409 Mycobacterium tuberculosis sequence from clone y409
          Length = 41321

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    tgatcgattcgtcggccggt 79
             ||||||||||||||||||||
Sbjct: 12767 tgatcgattcgtcggccggt 12748


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,639,623
Number of Sequences: 3902068
Number of extensions: 2639623
Number of successful extensions: 57123
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55862
Number of HSP's gapped (non-prelim): 1257
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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