ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast42b03 |
|---|---|
| Clone Library Name | barley_pub |
>HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)| Length = 176 Score = 51.2 bits (121), Expect = 6e-07 Identities = 25/61 (40%), Positives = 43/61 (70%) Frame = +1 Query: 169 IPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAE 348 +P YPEMIV+ + +L EPNGS+++AI++ IE + G+LP + ++ +HL++M + E Sbjct: 12 LPPYPEMIVKTLEALNEPNGSNKSAISKYIETTY---GELPDA--TVLGSHLNKMKDSGE 66 Query: 349 L 351 L Sbjct: 67 L 67
>H12_ARATH (P26569) Histone H1.2| Length = 273 Score = 49.3 bits (116), Expect = 2e-06 Identities = 31/89 (34%), Positives = 48/89 (53%) Frame = +1 Query: 88 SRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAA 267 S++ T A ++P + P+Y EMI +AI +L+E GSSQ AI + IE Sbjct: 35 SKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEK 94 Query: 268 HGAGGDLPPSHPALVAAHLSRMSAAAELV 354 H + LPP+ L+ +L R+ A+ +LV Sbjct: 95 HKS---LPPTFRKLLLVNLKRLVASEKLV 120
>H1_WHEAT (P27806) Histone H1| Length = 238 Score = 48.9 bits (115), Expect = 3e-06 Identities = 32/96 (33%), Positives = 49/96 (51%) Frame = +1 Query: 79 SQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRI 258 ++P++ A S+ G PR PSY EM+ EAIA+L+E +GSS AI + I Sbjct: 28 AKPAKAPKAAKAKKSTPGPKKPRVTP---AHPSYAEMVSEAIAALKERSGSSTIAIGKFI 84 Query: 259 EAAHGAGGDLPPSHPALVAAHLSRMSAAAELVAFAG 366 E H A LP + ++ + ++ AA +L G Sbjct: 85 EDKHKA--HLPANFRKILLTQIKKLVAAGKLTKVKG 118
>H1_PEA (P08283) Histone H1 (PsH1b) (PsH1b-40)| Length = 265 Score = 46.6 bits (109), Expect = 1e-05 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Frame = +1 Query: 118 TSSGGQSSPRAAS---DLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAGGDL 288 T S P+ AS + A P+Y EMI +AI SL+E NGSSQ AIA+ IE L Sbjct: 42 TKKAKGSKPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQ---KQL 98 Query: 289 PPSHPALVAAHLSRMSAAAELVAFAG 366 P + L+ +L + A+ +L+ G Sbjct: 99 PANFKKLLLQNLKKNVASGKLIKVKG 124
>H1_LYCES (P37218) Histone H1| Length = 287 Score = 45.4 bits (106), Expect = 3e-05 Identities = 30/93 (32%), Positives = 48/93 (51%) Frame = +1 Query: 76 DSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARR 255 ++ P ++ +A T + ++PR S P Y EMI +AI +L+E GSSQ AI + Sbjct: 25 EANPPAKSGKAKKETKAKKPAAPRKRSATPTHPPYFEMIKDAIVTLKERTGSSQHAITKF 84 Query: 256 IEAAHGAGGDLPPSHPALVAAHLSRMSAAAELV 354 IE + LP + L+ L + A+ +LV Sbjct: 85 IEEKQKS---LPSNFKKLLLTQLKKFVASEKLV 114
>H11_ARATH (P26568) Histone H1.1| Length = 274 Score = 44.7 bits (104), Expect = 6e-05 Identities = 26/61 (42%), Positives = 38/61 (62%) Frame = +1 Query: 172 PSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAEL 351 P+Y EMI +AI +L+E GSSQ AI + IE +LPP+ L+ +L R+ A+ +L Sbjct: 63 PTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKR---KELPPTFRKLLLLNLKRLVASGKL 119 Query: 352 V 354 V Sbjct: 120 V 120
>H1_MAIZE (P23444) Histone H1| Length = 245 Score = 44.7 bits (104), Expect = 6e-05 Identities = 31/89 (34%), Positives = 45/89 (50%) Frame = +1 Query: 85 PSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEA 264 P+ A A A + + + AS + Y EM+ EAI SL+E GSS AIA+ +E Sbjct: 23 PAAPAADANAAKAKKATAPKKRASPTHL--PYAEMVSEAITSLKERTGSSSYAIAKFVED 80 Query: 265 AHGAGGDLPPSHPALVAAHLSRMSAAAEL 351 H A LPP+ L+ L ++ A +L Sbjct: 81 KHKA--KLPPNFRKLLNVQLKKLVAGGKL 107
>H1_EUPES (Q9M5W4) Histone H1| Length = 229 Score = 44.3 bits (103), Expect = 7e-05 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 2/117 (1%) Frame = +1 Query: 10 PNSHPLARSLTHAHSR--TRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYP 183 P S P+ +T S+ T+A ++ A S G SS PS+ Sbjct: 5 PVSAPVVPEVTERKSKRGTKAAAVKVPKEKKKVIAAKKPKSKGTSSH---------PSFF 55 Query: 184 EMIVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAELV 354 EMI +AI++L+E GSSQ AI + +E H LP + L+ HL ++ A+ +LV Sbjct: 56 EMISDAISTLKERTGSSQYAINKFVEDKH---KQLPSNFRKLLLFHLKKLVASGKLV 109
>H1_ASCIM (Q9UV33) Histone H1| Length = 213 Score = 39.3 bits (90), Expect = 0.002 Identities = 20/56 (35%), Positives = 33/56 (58%) Frame = +1 Query: 97 ATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEA 264 A A A + +++P+ + PSY EM+ +AI L+E NGSS+ AI + I++ Sbjct: 3 AATASAAATPAKKAAPKKPAAAPEHPSYKEMLTKAITELKERNGSSRQAIKKFIQS 58
>H11_VOLCA (Q08864) Histone H1-I| Length = 260 Score = 37.4 bits (85), Expect = 0.009 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%) Frame = +1 Query: 7 APNSHPLARSLTHAHS-RTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYP 183 AP P A + A + + +A + + +A +A + + P+AA P Y Sbjct: 6 APVVAPAAEAAPAAEAPKAKAPKAKAPKQPKAPKAPKEPKAPKEKKPKAAP---THPPYI 62 Query: 184 EMIVEAIASLREPNGSSQAAIARRIEAAHG 273 EM+ +AI +L+E NGSS A+ + IE +G Sbjct: 63 EMVKDAITTLKERNGSSLPALKKFIENKYG 92
>H14_CAEEL (O17536) Histone H1.4 (Histone H1-like protein 4)| Length = 252 Score = 36.6 bits (83), Expect = 0.015 Identities = 21/62 (33%), Positives = 34/62 (54%) Frame = +1 Query: 94 RATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHG 273 +AT+A AT + P +D A P + M+ EAI+S+++ G S+AAI + I + Sbjct: 27 KATKASKATKAKTTKVPMVKAD-AAHPPFINMVTEAISSIKDRKGPSRAAILKYITTKYT 85 Query: 274 AG 279 G Sbjct: 86 LG 87
>H1_ASHGO (Q75C22) Histone H1| Length = 225 Score = 36.2 bits (82), Expect = 0.020 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = +1 Query: 109 GMATSSG--GQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAG 279 G +SG G+ A +P Y ++IVEA+ SL E GSS+ AI + I + G Sbjct: 2 GPKATSGTRGRGKKVGTKTAAPLPKYKDLIVEAVVSLAERGGSSRQAIKKFIRDKYAVG 60
>H1_LYCPN (P40267) Histone H1| Length = 202 Score = 35.4 bits (80), Expect = 0.033 Identities = 20/61 (32%), Positives = 33/61 (54%) Frame = +1 Query: 172 PSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAEL 351 P Y +MI EA+ +L E GSS A+A+ +E H +LP + ++ L +A +L Sbjct: 50 PPYFQMIKEALLALNEKGGSSPYAVAKYMEDKH--KDELPANFRKILGLQLKNSAAKGKL 107 Query: 352 V 354 + Sbjct: 108 I 108
>H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific| linker histone H1-like protein) [Contains: Sperm-specific protein PHI-3 (Protamine-like protein PHI-3) (PL-IV)] Length = 202 Score = 35.4 bits (80), Expect = 0.033 Identities = 26/71 (36%), Positives = 34/71 (47%) Frame = +1 Query: 52 SRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGS 231 SR+R+R R P R + T PRAA + PS MIV AI +++ GS Sbjct: 7 SRSRSRSRSKSPKRSPAKKARKTPK----KPRAAGGVKK-PSTLSMIVAAITAMKNRKGS 61 Query: 232 SQAAIARRIEA 264 S AI + I A Sbjct: 62 SVQAIRKYILA 72
>H1L1_OSTED (Q86QH9) Sperm-specific H1/protamine-like protein type 1 precursor| [Contains: Sperm-specific protein OE1 (Sperm-specific linker histone H1-like protein OE1); Sperm-specific protein OE3 (Protamine-like OS3)] Length = 202 Score = 34.7 bits (78), Expect = 0.057 Identities = 26/71 (36%), Positives = 34/71 (47%) Frame = +1 Query: 52 SRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGS 231 SR+R+R R P R + T PRAA A P+ MIV AI +++ GS Sbjct: 8 SRSRSRSRSKSPKRSPAKKARKTPK----KPRAAGG-AKKPTTLSMIVAAITAMKNRKGS 62 Query: 232 SQAAIARRIEA 264 S AI + I A Sbjct: 63 SVQAIRKYILA 73
>H15_CAEEL (O01833) Histone H1.5 (Histone H1-like protein 5)| Length = 224 Score = 34.7 bits (78), Expect = 0.057 Identities = 22/73 (30%), Positives = 39/73 (53%) Frame = +1 Query: 100 TQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAG 279 T+A AT + P+ +A P + MI EA+++L++ GSS+ AI + I A + G Sbjct: 15 TKASKATKAKATKIPKVKV-VAAHPPFINMITEAVSNLKDRKGSSRVAIFKFITAKYTLG 73 Query: 280 GDLPPSHPALVAA 318 + ++ L +A Sbjct: 74 DQVNKTNAHLRSA 86
>H12_VOLCA (Q08865) Histone H1-II| Length = 240 Score = 34.7 bits (78), Expect = 0.057 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +1 Query: 172 PSYPEMIVEAIASLREPNGSSQAAIARRIEAAHG 273 P Y +M+ +AI SL+E +GSS A+ + IEA +G Sbjct: 25 PPYIQMVTDAILSLKERDGSSLPALKKFIEAKYG 58
>SYFB_SYNPX (Q7U6V9) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 814 Score = 34.7 bits (78), Expect = 0.057 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 13/107 (12%) Frame = +1 Query: 100 TQAGMATSSGGQSSPRAASD--------LAVIPSYPEMIVEAIASLREPNGSSQAAIARR 255 ++ G+AT S G + A +D +A + + ++E + P+G S IAR Sbjct: 124 SELGLATESDGIAELDALTDELPALGAPVAPMLGLDDTVLELAITANRPDGLSMVGIARE 183 Query: 256 IEAAHGAGGDLP-----PSHPALVAAHLSRMSAAAELVAFAGGKYAL 381 + A G+ LP P+H L A SAA+ AGG Y + Sbjct: 184 VAALTGSALTLPVLTLKPAHELLQA------SAASAEAMQAGGLYGI 224
>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)| Length = 939 Score = 34.3 bits (77), Expect = 0.074 Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 8/103 (7%) Frame = +1 Query: 7 APNSHPLARSLTHAHSRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPE 186 AP+ P A + R R + + R A A ++ ++P A SD Sbjct: 18 APSPAPAAEPESRRRDGGRLRASQTSDAPRVAAAAAAAAAAASAAPSAPSD--------R 69 Query: 187 MIVEAIASLREPNGSSQAAIAR--------RIEAAHGAGGDLP 291 ++ +P G +Q A R R+EAA GAG D P Sbjct: 70 LLFSRRGQGADPGGKAQDAQPRPDVARADPRLEAASGAGADSP 112
>H1D_STRPU (P15870) Histone H1-delta| Length = 185 Score = 34.3 bits (77), Expect = 0.074 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = +1 Query: 70 ERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIA 249 + D+ P+ A + S P+ A P Y +MI A+ SL+E GSS+ AI Sbjct: 3 DTDAAPAAPAPSTPKKAAKKKASKPKTP---ASHPKYSDMIASALESLKEKKGSSRQAIL 59 Query: 250 RRIEAAHGAG 279 + ++A G Sbjct: 60 KYVKANFTVG 69
>H1A_OLILU (P82898) Histone H1A (Fragment)| Length = 47 Score = 33.9 bits (76), Expect = 0.097 Identities = 15/31 (48%), Positives = 23/31 (74%) Frame = +1 Query: 172 PSYPEMIVEAIASLREPNGSSQAAIARRIEA 264 P+Y +M+ +AI +L++ NGSS AI + IEA Sbjct: 1 PTYYDMVKDAIVALKDRNGSSMQAIKKYIEA 31
>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2| Length = 954 Score = 33.5 bits (75), Expect = 0.13 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 2/87 (2%) Frame = +1 Query: 94 RATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHG 273 R AG GG+SS + LA Y E+ I +R PNG+ Q R+ + Sbjct: 310 RGGAAGAFGRQGGKSSKARKNRLAKRHEYEELKAPTIGGVRIPNGNGQTIRLRQGASLAD 369 Query: 274 AGGDLPPSHPALVAA--HLSRMSAAAE 348 + + ALV HL +M+ A + Sbjct: 370 LAEKINVNQAALVTVLFHLGQMATATQ 396
>H1L_MYTCA (P22974) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific| linker histone H1-like protein) Length = 148 Score = 33.5 bits (75), Expect = 0.13 Identities = 25/71 (35%), Positives = 33/71 (46%) Frame = +1 Query: 52 SRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGS 231 SR+R+R R P R + T R A+ A PS MIV AI +++ GS Sbjct: 7 SRSRSRSRSKSPKRSPAKKARKTPK-----KRRATGGAKKPSTLSMIVAAIQAMKNRKGS 61 Query: 232 SQAAIARRIEA 264 S AI + I A Sbjct: 62 SVQAIRKYILA 72
>AROA2_BURPS (P39915) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 463 Score = 33.1 bits (74), Expect = 0.17 Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Frame = +1 Query: 31 RSLTHAHSRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLA--VIPSYPEMIVEAI 204 R ++ +R R R + G A G R ++L+ V+ S PE+ AI Sbjct: 358 RGRSYYVARCRRDSRMAMCFSLPAHGGRAVRHPGSRLHRQDAELSSKVVRSVPEVWGMAI 417 Query: 205 ASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAA 318 +LR P+G + A+A R E+ G GD+ P L AA Sbjct: 418 TALRCPSGGALRAMA-RFESMTGQRGDVVSQLPLLGAA 454
>H1_YEAST (P53551) Histone H1| Length = 258 Score = 32.7 bits (73), Expect = 0.22 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Frame = +1 Query: 52 SRTRARERDSQPSRRATQAGM--ATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPN 225 S T+ + +P AT G +TS A + A SY E+I+E + +L+E Sbjct: 6 STTKTTSKGKKP---ATSKGKEKSTSKAAIKKTTAKKEEASSKSYRELIIEGLTALKERK 62 Query: 226 GSSQAAIARRIE 261 GSS+ A+ + I+ Sbjct: 63 GSSRPALKKFIK 74
>H1G_STRPU (P07796) Histone H1-gamma, late| Length = 217 Score = 32.7 bits (73), Expect = 0.22 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = +1 Query: 136 SSPRAASDLAVIPSYP---EMIVEAIASLREPNGSSQAAIARRIEA 264 + P+ A V P++P +M+V A+ +L+E GSS AI + I A Sbjct: 4 AKPKVAKKARVAPAHPPSSQMVVAAVTALKERGGSSTQAIKKYIAA 49
>NIPA_XENLA (Q6P7H4) NIPA-like protein (Zinc finger C3HC-type protein 1-like)| Length = 477 Score = 32.3 bits (72), Expect = 0.28 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 7 APNSHPLARSLTHAHSRTRARERDSQPSRRATQAGMATSSGGQSSPRAASD 159 A + P+ RS+ + E S P RRA + + +SS +SPR+ D Sbjct: 345 AVRNRPVTRSMGQGENTGLGNELHSSPHRRAKRPRLCSSSSSDTSPRSCFD 395
>H1_DICDI (P54671) Histone H1| Length = 179 Score = 32.3 bits (72), Expect = 0.28 Identities = 17/38 (44%), Positives = 22/38 (57%) Frame = +1 Query: 172 PSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAGGD 285 P+Y MI AIA ++ GSSQ AI + IEA + D Sbjct: 24 PTYQVMISTAIAHYKDRTGSSQPAIIKYIEANYNVAPD 61
>ARLY_HALMA (Q5UZ47) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 499 Score = 32.3 bits (72), Expect = 0.28 Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 4/99 (4%) Frame = +1 Query: 49 HSRTRARERDSQPSRRATQAGMAT----SSGGQSSPRAASDLAVIPSYPEMIVEAIASLR 216 H A +RD RR AG SS A+DLAV ++ M+ E R Sbjct: 7 HETANADDRDETVVRRDRFAGGPARSFLSSLSDDERIFAADLAVDRAHVVMLAEREIIDR 66 Query: 217 EPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRM 333 E G AA+A +A H A D H A+ +A + R+ Sbjct: 67 ETAGDVLAALADVEDAGHDALPDGEDVHEAIESAVIERV 105
>JUND_RAT (P52909) Transcription factor jun-D| Length = 341 Score = 32.3 bits (72), Expect = 0.28 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 9/84 (10%) Frame = +1 Query: 94 RATQAGMATSS-GGQSSPRAASDLAVIPSYPEMIVEAIAS-----LREPNGSSQAAIARR 255 + +Q G AT++ G +P A +DLA P E V A S P G++ A A Sbjct: 149 KQSQLGAATAATSGAPAPPAPADLAATPGATETPVYANLSSFAGGAGPPGGAATVAFAAE 208 Query: 256 ---IEAAHGAGGDLPPSHPALVAA 318 GA G PP HP +AA Sbjct: 209 PVPFPPPPGALGPPPPPHPPRLAA 232
>JUND_MOUSE (P15066) Transcription factor jun-D| Length = 341 Score = 32.3 bits (72), Expect = 0.28 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 9/84 (10%) Frame = +1 Query: 94 RATQAGMATSS-GGQSSPRAASDLAVIPSYPEMIVEAIAS-----LREPNGSSQAAIARR 255 + +Q G AT++ G +P A +DLA P E V A S P G++ A A Sbjct: 149 KQSQLGAATAATSGAPAPPAPADLAATPGATETPVYANLSSFAGGAGPPGGAATVAFAAE 208 Query: 256 ---IEAAHGAGGDLPPSHPALVAA 318 GA G PP HP +AA Sbjct: 209 PVPFPPPPGALGPPPPPHPPRLAA 232
>H1_LYTPI (P06144) Late histone H1| Length = 210 Score = 32.0 bits (71), Expect = 0.37 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Frame = +1 Query: 136 SSPRAASDLAVIPSYP---EMIVEAIASLREPNGSSQAAIARRIEA 264 + P+ A P++P +M+V AI +L+E GSS AI + I A Sbjct: 4 AKPKTAKKARAAPAHPPTSQMVVAAITALKERGGSSNQAIKKYIAA 49
>H1X_CAEEL (Q18336) Histone H1.X (Histone H1-like protein 1)| Length = 232 Score = 32.0 bits (71), Expect = 0.37 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = +1 Query: 172 PSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAGGDLP 291 PSY +MI AI ++ GSS+AAI + I + G +LP Sbjct: 38 PSYMDMIKGAIQAIDNGTGSSKAAILKYIAQNYHVGENLP 77
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 31.2 bits (69), Expect = 0.63 Identities = 28/107 (26%), Positives = 37/107 (34%), Gaps = 12/107 (11%) Frame = +1 Query: 10 PNSHPLARSLTHAHSRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEM 189 PN P R T + +R+ E + P RR Q G T S S A SD P Sbjct: 1076 PNHPPAPRGRTASETRSEGSEYEEIPKRR-RQRGSETGSETHESDLAPSDKEAPPPKEGT 1134 Query: 190 IVEAIASLREPNGSSQAAIA------------RRIEAAHGAGGDLPP 294 + + + P A A R + + G GG PP Sbjct: 1135 LTQVPLAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPP 1181
>UL25_HCMVA (P16761) Tegument protein UL25| Length = 656 Score = 31.2 bits (69), Expect = 0.63 Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 2/102 (1%) Frame = +1 Query: 7 APNSHPLARSLTHAHSRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVI--PSY 180 AP+S L R + + E+ SRR Q G ++P+A V PS Sbjct: 67 APSSFELVRETGGTGAAKKPSEKKRSSSRRQPQIAAGAPRGSPATPKAGKSPKVSRPPSV 126 Query: 181 PEMIVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPA 306 P + + N SS + +R + + + P P+ Sbjct: 127 PSLPENGAGGGGDDNSSSGGSSSRTTSNSSRSTSPVAPGEPS 168
>KCNN2_MOUSE (P58390) Small conductance calcium-activated potassium channel| protein 2 (SK2) Length = 574 Score = 31.2 bits (69), Expect = 0.63 Identities = 26/77 (33%), Positives = 35/77 (45%) Frame = +1 Query: 52 SRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGS 231 SR +E DS+ A + GG SSP AA+ A S PE++V S E N S Sbjct: 20 SRRNLQEMDSEAQPLQPPASVVGGGGGASSPSAAA--AASSSAPEIVV----SKPEHNNS 73 Query: 232 SQAAIARRIEAAHGAGG 282 + A+ +G GG Sbjct: 74 NNLAL-------YGTGG 83
>CDX4_MOUSE (Q07424) Homeobox protein CDX-4 (Caudal-type homeobox protein 4)| Length = 282 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +1 Query: 97 ATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAA 243 ++ AG+ TS GG SP AS+ P YP + S +P+G S A Sbjct: 24 SSTAGVGTS-GGSGSPLPASNFTAAPVYPHYVGYPHMSNMDPHGPSLGA 71
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 31.2 bits (69), Expect = 0.63 Identities = 36/109 (33%), Positives = 45/109 (41%), Gaps = 15/109 (13%) Frame = +1 Query: 88 SRRATQAGMATSSGGQSSPR---AASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRI 258 SR+A TS G ++ A+S L+ PS P + V A A + G +QAA Sbjct: 4 SRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAVSAAALVS--GGVAQAA----- 56 Query: 259 EAAHGAGGDLPPSHPALVA------------AHLSRMSAAAELVAFAGG 369 G+GG P P LVA LSR S AA A GG Sbjct: 57 ----GSGGLGGPVRPVLVAPAVSGSGGGAVSTGLSRHSCAARPSAGVGG 101
>KCNN2_RAT (P70604) Small conductance calcium-activated potassium channel| protein 2 (SK2) Length = 580 Score = 30.8 bits (68), Expect = 0.82 Identities = 26/77 (33%), Positives = 34/77 (44%) Frame = +1 Query: 52 SRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGS 231 SR E DS+ A + GG SSP AA+ A S PE++V S E N S Sbjct: 20 SRRNLHEMDSEAQPLQPPASVVGGGGGASSPSAAA--AASSSAPEIVV----SKPEHNNS 73 Query: 232 SQAAIARRIEAAHGAGG 282 + A+ +G GG Sbjct: 74 NNLAL-------YGTGG 83
>H11_GLYBA (P40263) Histone H1-I| Length = 233 Score = 30.8 bits (68), Expect = 0.82 Identities = 20/77 (25%), Positives = 32/77 (41%) Frame = +1 Query: 40 THAHSRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLRE 219 T +A P++ +A A G P+ + P EM+V A+ +L E Sbjct: 10 TPVEEAPKAASPAKSPAKSPGRAKKAKKDGSDK-PKKPKAIPTHPPVSEMVVNALKTLNE 68 Query: 220 PNGSSQAAIARRIEAAH 270 GSS AI + + A + Sbjct: 69 KGGSSVIAIKKFLVATY 85
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 30.8 bits (68), Expect = 0.82 Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 3/100 (3%) Frame = +1 Query: 7 APNSHPLARSLTHAHSRTRARERDSQPSRRATQAGM--ATSSGGQSSPRAASDLAVIPSY 180 +PN LA +LT AHSR+ + R + RA+ G+ + G S + DLA Sbjct: 576 SPNRESLALALTAAHSRSGSEGRTPE---RASSPGLNKPLLATGDSPAPSVGDLAACAPS 632 Query: 181 PEMIVEAIASLRE-PNGSSQAAIARRIEAAHGAGGDLPPS 297 P SL P + +R A G GG LP S Sbjct: 633 PTSAAHMPCSLGPLPREDPLTSPSR---AQGGLGGQLPAS 669
>SYA_SILPO (Q5LRU1) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 890 Score = 30.8 bits (68), Expect = 0.82 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 25/108 (23%) Frame = +1 Query: 133 QSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIA---RRIEAAHGAG-------- 279 Q R + A++ + P + E + +L + + Q +A R + A GAG Sbjct: 723 QEGARLSQVTAMLKAQPAEVAERVRALMDERKALQNEVAQLRRDLAMAGGAGQGGGAETH 782 Query: 280 --GDLP-----------PSHPALVAAHLSRM-SAAAELVAFAGGKYAL 381 G +P PAL+ H SRM S A L+A AGGK A+ Sbjct: 783 EVGGVPFLAQVLSGVSGKDLPALIDEHKSRMGSGAVLLIADAGGKAAV 830
>H1O_CHITH (Q07134) Histone H1, orphon| Length = 244 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Frame = +1 Query: 79 SQPSRRATQAGMATSSGGQSSPRAASDLA--VIPSYP---EMIVEAIASLREPNGSSQAA 243 S P + +A A S P++ V P++P EM+V A+ +L+E GSS A Sbjct: 19 SPPKGKKEKAPKAPKSPKAEKPKSDKPKKPKVAPTHPPVSEMVVNAVTTLKERGGSSLIA 78 Query: 244 IARRIEAAH 270 I + + A + Sbjct: 79 IKKFVAAQY 87
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 30.4 bits (67), Expect = 1.1 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = +1 Query: 88 SRRATQAGMATSSGGQSSPR---AASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRI 258 SR+A TS G ++ A+S L+ PS P + S+ ++ + Sbjct: 4 SRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAA-----------SAATLVSGGV 52 Query: 259 EAAHGAGGDLPPSHPALVAAHLSRMSAAAELVA 357 A G+GG P P LVAA +S ++A V+ Sbjct: 53 APAAGSGGLGGPGRPVLVAAAVSGSASAGGAVS 85
>H1B_STRPU (P15869) Histone H1-beta, late embryonic| Length = 211 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = +1 Query: 172 PSYPEMIVEAIASLREPNGSSQAAIARRIE 261 PS EM++ AI +L+E GSS AI + IE Sbjct: 19 PSSSEMVLAAITALKERGGSSAQAIRKYIE 48
>H11_GLYSA (P40266) Histone H1-I| Length = 233 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = +1 Query: 130 GQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAH 270 G P+ + P EM+V A+ +L E GSS AI + + A + Sbjct: 39 GSDKPKKPKAIPTHPPVSEMVVNALKTLNEKGGSSVIAIKKFLVATY 85
>TRPD_PSEAE (P20574) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)| Length = 349 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +1 Query: 190 IVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAE-LVAFAG 366 IV A+A +RE Q + + G GGD A++ +S+AA +VA AG Sbjct: 55 IVGAVAVMRELADGVQLPTLKHVVDVVGTGGD---------GANIFNVSSAASFVVAAAG 105 Query: 367 GKYALH 384 GK A H Sbjct: 106 GKVAKH 111
>SYY_PROAC (Q6A7W0) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 418 Score = 30.0 bits (66), Expect = 1.4 Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 3/107 (2%) Frame = +1 Query: 64 ARERDSQPSRRATQAGMA---TSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSS 234 AR+ + +P RRA Q +A T R A++ A + LR+ + + Sbjct: 280 ARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAA------QAIFGRGELRDLDERT 333 Query: 235 QAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAELVAFAGGKY 375 +++ + AAH GG+ P A+VAA + + GG Y Sbjct: 334 VLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSGGRRAVAEGGAY 380
>H11_CAEEL (P10771) Histone H1.1| Length = 207 Score = 30.0 bits (66), Expect = 1.4 Identities = 28/94 (29%), Positives = 41/94 (43%) Frame = +1 Query: 85 PSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEA 264 P +A +A T +P A P Y MI EAI L++ G+S+ AI + I Sbjct: 15 PKAKAAKAAKPTKVAKAKAPVAH------PPYINMIKEAIKQLKDRKGASKQAILKFISQ 68 Query: 265 AHGAGGDLPPSHPALVAAHLSRMSAAAELVAFAG 366 + G ++ + L A L R + LV AG Sbjct: 69 NYKLGDNVIQINAHLRQA-LKRGVTSKALVQAAG 101
>ATM_MOUSE (Q62388) Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia| telangiectasia mutated homolog) (A-T, mutated homolog) Length = 3066 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 2/92 (2%) Frame = +1 Query: 73 RDSQPS-RRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIA 249 RDS S +R T + + G+ D I + PE++VE + +L E S+ + + Sbjct: 1307 RDSYVSQKRETATKVYDTLKGEDFLGKQIDQVFISNLPEIVVELLMTLHETADSADSDAS 1366 Query: 250 RRIEAAHGAGGDLPPS-HPALVAAHLSRMSAA 342 + A GDL P+ +P +H+ + + A Sbjct: 1367 QSATALCDFSGDLDPAPNPPYFPSHVIQATFA 1398
>H5_CAIMO (P06513) Histone H5| Length = 193 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = +1 Query: 172 PSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAG 279 PSY EMIV AI + + GSS+ +I + +++ + G Sbjct: 27 PSYSEMIVAAIRAEKSRGGSSRQSIQKYVKSHYKVG 62
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 29.6 bits (65), Expect = 1.8 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 7/113 (6%) Frame = +1 Query: 31 RSLTHAHSRTRARERDSQPSRRATQAGMATSSGGQSSPRAAS-------DLAVIPSYPEM 189 ++L A R R+ PS + T++ ++SS Q++P + + L PS Sbjct: 204 KALEEARQRARSIASAVAPSSQRTES-FSSSSTPQTAPTSINAAGLRTLSLRTDPSRTTA 262 Query: 190 IVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAE 348 + + + + SS+ R+ GDLPP P++ AH++ S AE Sbjct: 263 QNRSRTMMDDASESSKRIHLSRL-------GDLPPLDPSIDTAHIATTSVDAE 308
>ARMX2_MOUSE (Q6A058) Armadillo repeat-containing X-linked protein 2| Length = 784 Score = 29.6 bits (65), Expect = 1.8 Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 4/95 (4%) Frame = +1 Query: 19 HPLARSLTHAHSRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVE 198 HP+A T RA + T G A SGG ++PRAA+ S M V Sbjct: 304 HPVAAQSTGVVVPPRAVQYSGAA---VTSGGAAVPSGGAATPRAAASTQRTASTEVMQVP 360 Query: 199 AIASLRE----PNGSSQAAIARRIEAAHGAGGDLP 291 +A+ E P + A +A H + P Sbjct: 361 RVAAATEATETPRIGTPAMVAEASLPVHSGAAENP 395
>SYFB_SYNSC (Q3AJY9) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 807 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 8/72 (11%) Frame = +1 Query: 100 TQAGMATSSGG--------QSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARR 255 T+ G+ S G +S P S +A + + ++E + P+G S IAR Sbjct: 124 TELGLTEQSDGIAILDELDESLPPNGSPVAPLLGLDDTVLELAITANRPDGLSMVGIARE 183 Query: 256 IEAAHGAGGDLP 291 + A G LP Sbjct: 184 VAALTGGSLSLP 195
>H13_GLYBA (P40265) Histone H1-III| Length = 228 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +1 Query: 142 PRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAH 270 P+ A P EM+V AI +L+E GSS AI + + A + Sbjct: 31 PKKAKAPRTHPPVSEMVVNAIKTLKERGGSSLQAIKKFLAAQY 73
>H1E_CHITE (P40278) Histone H1E| Length = 237 Score = 29.3 bits (64), Expect = 2.4 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = +1 Query: 79 SQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYP---EMIVEAIASLREPNGSSQAAIA 249 S P + +A A + S + A P++P EM+V AI +L+E GSS AI Sbjct: 19 SSPKGKKEKAPKAPKAEKPKSDKPKKPKAA-PTHPPVSEMVVNAITTLKERGGSSLIAIK 77 Query: 250 RRIEAAH 270 + + A + Sbjct: 78 KFVAAQY 84
>H1E_CHIPA (P40262) Histone H1E| Length = 235 Score = 29.3 bits (64), Expect = 2.4 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = +1 Query: 79 SQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYP---EMIVEAIASLREPNGSSQAAIA 249 S P + +A A + S + A P++P EM+V AI +L+E GSS AI Sbjct: 19 SSPKGKKEKAPKAPKAEKPKSDKPKKPKAA-PTHPPVSEMVVNAITTLKERGGSSLIAIK 77 Query: 250 RRIEAAH 270 + + A + Sbjct: 78 KFVAAQY 84
>YDM5_SCHPO (P87136) Hypothetical protein C57A7.05 in chromosome I| Length = 1337 Score = 29.3 bits (64), Expect = 2.4 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Frame = +1 Query: 55 RTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSS 234 + AR+ QPS + ++SS QSS + IPS + ++ + R+P+ S Sbjct: 116 KDNARDIPQQPSHSQNPSSSSSSSSSQSSQHSTHLQFQIPSNEKKSLDDPSPRRKPSFFS 175 Query: 235 QAAIARRIEAAHGAGG-DLPPS 297 ++ + R+ +LPPS Sbjct: 176 KSNLKRKYRYLKNPDAWNLPPS 197
>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)| Length = 1285 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +3 Query: 9 PQFPPPRSLTHTRAQSHTRSRERQPAQPAGDAGRHG 116 P PPR+ THTR S SR P++P HG Sbjct: 540 PNSLPPRAATHTRPPSRPPSR---PSRPPSHPSAHG 572
>DAN1_YEAST (P47178) Cell wall protein DAN1 precursor (Covalently-linked cell| wall protein 13) Length = 298 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +1 Query: 79 SQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAA 243 S+ S AT++ ++ S ++S AAS A + S IAS E + +S A Sbjct: 134 SEASSAATESSSSSESSAETSSNAASTQATVSSESSSAASTIASSAESSVASSVA 188
>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22| Length = 907 Score = 29.3 bits (64), Expect = 2.4 Identities = 39/136 (28%), Positives = 50/136 (36%), Gaps = 13/136 (9%) Frame = +1 Query: 7 APNSHPLARSLTHAHSRTRARERDSQPSRRATQAGMATSSGG--QSSPRAASDLAVIPSY 180 +P+ P + S A SR+ +R R PSR G Q SPR I + Sbjct: 11 SPSPRPRSPSPA-APSRSWSRSRHESPSRSPAPMRERREEEGNEQRSPRQ------IAHH 63 Query: 181 PEMIVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPP-------SHPALVAAHLSRMSA 339 P R P GS + A RR +A G G P S P + +A Sbjct: 64 P----------RSPRGSDRRAEPRRRDAGGGGGDKYRPAKARKQRSPPPAATEEQKQAAA 113 Query: 340 AAE----LVAFAGGKY 375 AE L A +GG Y Sbjct: 114 KAEYERLLTARSGGTY 129 Score = 28.9 bits (63), Expect = 3.1 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Frame = +1 Query: 13 NSHPLARSLTHAHSRTRARERDSQPSR-----RATQAGMATSSGGQSSPRAASDLAVIPS 177 N PL+RS + + S + R RDS PSR R + A ++ G S R + PS Sbjct: 816 NRSPLSRSPSGSRSPSPRRRRDS-PSRSPVRDRESGGRAAAAAPGNSEARRGRSYSRSPS 874 Query: 178 YPEMIVEAIASLREPNGSSQAAIARR 255 A + R + SS A+ R+ Sbjct: 875 RTRSPSPAPSRRRRRDSSSDASAPRK 900
>KHSE_RHILO (Q985W2) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)| Length = 320 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = +1 Query: 154 SDLAVIPSYPEMIVEAIA--SLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVA 315 S + + P +I+ + SLR P + A + + + A H AG D P + P +A Sbjct: 89 SVIGTLAGRPAVIITFLEGLSLRRPTATHCAEVGKALAALHLAGADFPMTRPNALA 144
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/88 (28%), Positives = 34/88 (38%) Frame = +1 Query: 10 PNSHPLARSLTHAHSRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEM 189 PN P R T + +R+ E + P RR Q G T S S A SD P+ E Sbjct: 1073 PNHPPAPRGRTASETRSEGSEYEEIPKRR-RQRGSETGSETHESDLAPSDKEA-PTPKEG 1130 Query: 190 IVEAIASLREPNGSSQAAIARRIEAAHG 273 + + P G+ + R A G Sbjct: 1131 TLTQVPLAPPPPGAPPSPAPARFTARGG 1158
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +3 Query: 6 RPQFPPPRSLTHTRAQSHTRSRERQPAQPAGDAGRHG 116 R PPPR T+ R SH+ SR+ P++ GD +G Sbjct: 229 RDYAPPPRDYTY-RDYSHSSSRDDYPSRGYGDRDGYG 264
>H10_RAT (P43278) Histone H1.0 (H1(0)) (Histone H1')| Length = 193 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +1 Query: 100 TQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAG 279 T+ +T + +AA P Y +MIV AI + + GSS+ +I + I++ + G Sbjct: 1 TENSTSTPAAKPKRAKAAKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKVG 60
>PTPA1_ASPOR (Q2UN27) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 478 Score = 25.8 bits (55), Expect(2) = 2.5 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +1 Query: 73 RDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAA 243 + + P T A ATS G+ P + + +P + +A R P SSQ A Sbjct: 403 QSTPPPSTGTAAPWATSRAGREPPTTSRIPSALPDTSRLPPGPMAPTRAPWASSQPA 459 Score = 21.9 bits (45), Expect(2) = 2.5 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = +3 Query: 9 PQFPPPRSLTHTRAQSHTRSRERQPA 86 P PP S HT + TR R+ P+ Sbjct: 360 PSAIPPPSRIHTSSGPETRPRQVPPS 385
>TMCC2_MOUSE (Q80W04) Transmembrane and coiled-coil domains protein 2| Length = 706 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 49 HSRTRARERDSQPSRRATQAGMATSSGGQSSP 144 HSR R+RER+ Q S+ A Q Q SP Sbjct: 89 HSRRRSREREHQASQEAQQQQQQQGLSDQDSP 120
>H13_CAEEL (Q19743) Histone H1.3 (Histone H1-like protein 3)| Length = 207 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +1 Query: 142 PRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAGGDL 288 P+A +A P Y M+ AI L+E GSS+ AI + I + G + Sbjct: 29 PKAKKPVAH-PPYINMVTAAINGLKERKGSSKIAILKYITKNYNVGDQI 76
>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2365 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 8/59 (13%) Frame = +1 Query: 4 CAPNSHPLA----RSLTHAHSRTRARERD----SQPSRRATQAGMATSSGGQSSPRAAS 156 CA +P A R++ + RT +RD S P+R Q + TS Q +PR +S Sbjct: 724 CARRDNPRASSRNRTIQRDNPRTSCAQRDNPRASSPNRTIQQENLRTSCTRQDNPRTSS 782 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 8/59 (13%) Frame = +1 Query: 4 CAPNSHPLA----RSLTHAHSRTRARERD----SQPSRRATQAGMATSSGGQSSPRAAS 156 CA +P A R++ + RT +RD S P+R Q TS + +PRA+S Sbjct: 676 CALRDNPRASSPSRTIQQENPRTSCAQRDDPRASSPNRTTQQENPRTSCARRDNPRASS 734
>BAB2_DROME (Q9W0K4) Protein bric-a-brac 2| Length = 1067 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +1 Query: 7 APNSHP-LARSLTHAHSRTRARERDSQPSRRATQAGMATSSGGQSS 141 APNS AR L+ R R RER+ + SR+ +SSG S+ Sbjct: 905 APNSAASYARELSRERERDRERERERELSRQYGSQSRGSSSGSGSA 950
>H5_CHICK (P02259) Histone H5| Length = 189 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/49 (34%), Positives = 29/49 (59%) Frame = +1 Query: 133 QSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAG 279 ++S R+AS P+Y EMI AI + + GSS+ +I + I++ + G Sbjct: 17 KASRRSASH----PTYSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYKVG 61
>GAGXE_DROME (Q9NBX5) Nucleic-acid-binding protein from transposon X-element| Length = 501 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +1 Query: 19 HPLARSLTHAHSRTRARERDSQPSRRATQAGMATSSGG-QSSPRAASDLAVIPSYPEMIV 195 H SLTH + + + D PSR+ +++ S G Q S A+S + I + Sbjct: 398 HKQPMSLTHQQQKQKQQPYDGSPSRQRSRSRTRASRGTLQRSTDASSSIEAILQTLNENI 457 Query: 196 EAIASLRE 219 ++ S++E Sbjct: 458 NSLRSIQE 465
>Y2218_STRAW (Q82KZ4) UPF0276 protein SAV2218| Length = 487 Score = 28.5 bits (62), Expect = 4.1 Identities = 26/89 (29%), Positives = 40/89 (44%) Frame = +1 Query: 91 RRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAH 270 + T+AG + + G ++ R A++L V S V AIA R +QAA A Sbjct: 285 KAGTRAGASAGAAGAAT-RTAAELTVAES---TAVGAIAGPRRGGADAQAAPRAAGTEAL 340 Query: 271 GAGGDLPPSHPALVAAHLSRMSAAAELVA 357 A P+ PA L++ + + LVA Sbjct: 341 SAASTSTPADPARQRLALAQAALLSALVA 369
>PKNI_MYCTU (P65730) Probable serine/threonine-protein kinase pknI (EC| 2.7.11.1) Length = 585 Score = 28.5 bits (62), Expect = 4.1 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 13/111 (11%) Frame = +1 Query: 4 CAPNSHPLARSLTHAHSRTRARERDSQP-----------SRRATQAGMATSSGGQSSPRA 150 C P A ++ + T+A+ +P SR T G S +A Sbjct: 443 CTPTECLAAATMLDDNDHTQAKTPPVRPFLMQFGEGQWKSRPETVQFPCVGPNGSPSTQA 502 Query: 151 ASDLAVIPSYPE--MIVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPS 297 + L + P+ ++ E + ++ Q A+ R I A GDLPP+ Sbjct: 503 TTQLLALRPQPQGDLVGEMVVTVHSNECGQQGAVIR-IPAVASRSGDLPPA 552
>PKNI_MYCBO (P65731) Probable serine/threonine-protein kinase pknI (EC| 2.7.11.1) Length = 585 Score = 28.5 bits (62), Expect = 4.1 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 13/111 (11%) Frame = +1 Query: 4 CAPNSHPLARSLTHAHSRTRARERDSQP-----------SRRATQAGMATSSGGQSSPRA 150 C P A ++ + T+A+ +P SR T G S +A Sbjct: 443 CTPTECLAAATMLDDNDHTQAKTPPVRPFLMQFGEGQWKSRPETVQFPCVGPNGSPSTQA 502 Query: 151 ASDLAVIPSYPE--MIVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPS 297 + L + P+ ++ E + ++ Q A+ R I A GDLPP+ Sbjct: 503 TTQLLALRPQPQGDLVGEMVVTVHSNECGQQGAVIR-IPAVASRSGDLPPA 552
>LMO6_MOUSE (Q80VL3) LIM domain only protein 6 (Triple LIM domain protein 6)| Length = 624 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%) Frame = +3 Query: 6 RPQFPPPRSLTHTRAQSHTRSRERQPAQPA----GDAGRHGH 119 RP+ PPPR+ + H R R+R + + GRHGH Sbjct: 499 RPRSPPPRTPSCHHHHHHRRRRQRHRRRGSHHHHHHPGRHGH 540
>REPS2_HUMAN (Q8NFH8) RalBP1-associated Eps domain-containing protein 2| (RalBP1-interacting protein 2) (Partner of RalBP1) Length = 660 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +3 Query: 9 PQFPPPR-SLTHTRAQSHTRSRERQPAQPAGDAG 107 P PPPR TH+RA S ++ QP+ PA +G Sbjct: 477 PPTPPPRPQKTHSRASSLDLNKVFQPSVPATKSG 510
>H11_WHEAT (P15871) Histone H1.1 (Fragment)| Length = 25 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/25 (52%), Positives = 19/25 (76%) Frame = +1 Query: 187 MIVEAIASLREPNGSSQAAIARRIE 261 M+ EAIA+L+E GSS+ AI ++ E Sbjct: 1 MVSEAIAALKEREGSSEFAIGKKKE 25
>IF2_SYMTH (Q67P86) Translation initiation factor IF-2| Length = 1044 Score = 28.1 bits (61), Expect = 5.3 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 4/120 (3%) Frame = +1 Query: 1 RCAPNSHPLARSLTHAHSRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSY 180 R A + P+A A + +A + + +P+ +A A A ++ + + A AV Sbjct: 160 RPAAEAQPVAERRAPAEA-AQAAQAERRPAEKAQPAAAAKAAPPEKAGAAPVPGAVAEQ- 217 Query: 181 PEMIVEAIASLREPNGSSQ----AAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAE 348 + A+ ++P G ++ AA A+ A G G P+ A A R +AAAE Sbjct: 218 -KQAATPAAAEQKPAGKAEQTAGAAQAKPARAEAGTGASSRPASAAPAAQGEKRPAAAAE 276
>H1_CHITH (P21895) Histone H1| Length = 231 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 7/76 (9%) Frame = +1 Query: 79 SQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYP-------EMIVEAIASLREPNGSSQ 237 S P+ +A+ + + + SD P P +MIV AI +L+E GSS Sbjct: 2 SDPAIEVAPVPVASPAKAKKEKKPKSDKPKKPKAPRTHPPVSDMIVNAIKTLKERGGSSV 61 Query: 238 AAIARRIEAAHGAGGD 285 AI + + A + D Sbjct: 62 QAIKKFLVAQYKVDTD 77
>MAGI2_HUMAN (Q86UL8) Membrane-associated guanylate kinase, WW and PDZ| domain-containing protein 2 (Membrane-associated guanylate kinase inverted 2) (MAGI-2) (Atrophin-1-interacting protein 1) (Atrophin-1-interacting protein A) Length = 1455 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/61 (34%), Positives = 26/61 (42%) Frame = +1 Query: 196 EAIASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAELVAFAGGKY 375 + + RE + S Q A R+E A G G PA A +A A A AGGK Sbjct: 1308 QRLGEQRERSASPQRAARPRLEEAPGGQGRPEAGRPASEARAPGLAAADAADAARAGGKE 1367 Query: 376 A 378 A Sbjct: 1368 A 1368
>H1_ECHCR (P02257) Histone H1, gonadal (Fragment)| Length = 171 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Frame = +1 Query: 79 SQPSRRATQAGMATSSGGQSSPRAASDL------AVIPSYPEMIVEAIASLREPNGSSQA 240 + P +RA + + SP+ S A P +MI AIA+ +E GSS A Sbjct: 2 ASPQKRAASPRKSPKKSPRKSPKKKSPRKRKARSAAHPPVIDMITAAIAAQKERRGSSVA 61 Query: 241 AIARRIEAAH 270 I I A + Sbjct: 62 KIQSYIAAKY 71
>VP26_EBV (P14348) Capsid protein VP26| Length = 176 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/68 (29%), Positives = 29/68 (42%) Frame = +1 Query: 103 QAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAGG 282 QA A S+G + +A AV S + +I+SLR + AA + G+GG Sbjct: 101 QAQAAASAGTGALASSAPSTAVAQSATPSVSSSISSLRAATSGATAAASAAAAVDTGSGG 160 Query: 283 DLPPSHPA 306 P A Sbjct: 161 GGQPHDTA 168
>BCSB3_ACEXY (Q9WX62) Cyclic di-GMP-binding protein precursor (Cellulose| synthase regulatory subunit) (Cellulose synthase protein B) (CDGBP) Length = 804 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = +1 Query: 190 IVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAA 345 +V IA L G+ A IA + A G DLPP A A ++ SA A Sbjct: 3 MVSLIALLVFATGAQAAPIASKAPAHQPTGSDLPPLPAAAPVAPAAQPSAQA 54
>H1A_PLADU (P06894) Histone H1A, sperm| Length = 121 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +1 Query: 145 RAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEA 264 R + A P M+V AI L+E GSS AI + I A Sbjct: 3 RRKTAAAAHPPVATMVVTAILGLKERKGSSMVAIKKYIAA 42
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 16/61 (26%) Frame = +3 Query: 6 RPQFPPPRSLTHTRAQSHTRSRERQPAQPA----------------GDAGRHGHLQRRPV 137 RP+ P P + A + R PA PA GD GRH H R P+ Sbjct: 206 RPRTPAPPAQPAAVAAAPARRGPASPASPAAGPVSAPGGGGAPSAGGDRGRHHHQHREPL 265 Query: 138 V 140 + Sbjct: 266 L 266
>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Activated in prostate cancer protein) Length = 2839 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +1 Query: 61 RARERDSQP-SRRATQAGMATSSGGQSSPRAASDLAVIPSYP 183 RA DS P S A++ GM+ + QS PR AS +A + P Sbjct: 2027 RAPRADSGPVSPAASRNGMSVAGNRQSEPRLASHVAADTAQP 2068
>BCSB1_ACEXY (P37716) Cyclic di-GMP-binding protein precursor (Cellulose| synthase regulatory subunit) (Cellulose synthase protein B) (CDGBP) Length = 802 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +1 Query: 190 IVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAE 348 +V IA L G+ A +A + A AG DLPP PA + + +A+A+ Sbjct: 3 MVSLIALLVFATGAQAAPVASKAPAPQPAGSDLPPL-PAAASQAATPAAASAD 54
>HXA13_MOUSE (Q62424) Homeobox protein Hox-A13 (Hox-1.10)| Length = 386 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Frame = +1 Query: 226 GSSQAAIARRIEAAHGAGGDLPPSHPALVAA--HLSRMSAAAELVAFAGGK 372 G++ AA A AA GAGG P HPA AA + S +AAA A A + Sbjct: 37 GAAAAAAAAAAAAAAGAGGGGFP-HPAAAAAGGNFSVAAAAAAAAAAAANQ 86
>GAG_SFV3L (P27400) Gag polyprotein (Core polyprotein)| Length = 643 Score = 27.7 bits (60), Expect = 7.0 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 7/87 (8%) Frame = +1 Query: 109 GMATSSGGQSSPRAASDLAVIPSYPEM-------IVEAIASLREPNGSSQAAIARRIEAA 267 G + SGG + ++ AV+PS P + I++ +A + P + QA + I A Sbjct: 238 GSSDGSGGSIPVQPSAPPAVLPSLPSLPAPVSQPIIQYVA--QPPVPAPQAIPIQHIRAV 295 Query: 268 HGAGGDLPPSHPALVAAHLSRMSAAAE 348 G P++P + L R SAA E Sbjct: 296 TGN----TPTNPRDIPMWLGRHSAAIE 318
>H12_GLYBA (P40264) Histone H1-II| Length = 232 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +1 Query: 172 PSYPEMIVEAIASLREPNGSSQAAIARRIEAAH 270 P EM+V AI +L+E GSS AI + + A + Sbjct: 41 PPVSEMVVNAIKTLKERGGSSLQAIKKFLVAQY 73
>H1_PARAN (P02256) Histone H1, gonadal| Length = 248 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +1 Query: 67 RERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYP---EMIVEAIASLREPNGSSQ 237 ++R + P + ++ + +SPR + A ++P EM+ AI +++E GSS Sbjct: 5 QKRAASPRKSPRKSPKKSPRKASASPRRKAKRARASTHPPVLEMVQAAITAMKERKGSSA 64 Query: 238 AAI 246 A I Sbjct: 65 AKI 67
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 16/61 (26%) Frame = +3 Query: 6 RPQFPPPRSLTHTRAQSHTRSRERQPAQPA----------------GDAGRHGHLQRRPV 137 RP+ P P + A + R PA PA GD GRH H R P+ Sbjct: 214 RPRTPAPPAQPAAVAAAPARRGPASPASPAAGPVSAPGGGGAPSGGGDRGRHHHQHREPL 273 Query: 138 V 140 + Sbjct: 274 L 274
>HXA13_HUMAN (P31271) Homeobox protein Hox-A13 (Hox-1J)| Length = 388 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Frame = +1 Query: 226 GSSQAAIARRIEAAHGAGGDLPPSHPALVAA--HLSRMSAAAELVAFAGGK 372 G++ AA A AA GAGG P HPA AA + S +AAA A A + Sbjct: 37 GAAAAAAAAAAAAAAGAGGGGFP-HPAAAAAGGNFSVAAAAAAAAAAAANQ 86
>H5_ANSAN (P02258) Histone H5| Length = 193 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = +1 Query: 145 RAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAG 279 RA A P+Y EMI AI + + GSS+ +I + +++ + G Sbjct: 18 RAPRKPASHPTYSEMIAAAIRADKSRGGSSRQSIQKYVKSHYKVG 62
>PRIM_MYXXA (P50070) DNA primase (EC 2.7.7.-)| Length = 606 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +1 Query: 235 QAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAE 348 +AA+ ++ AGGD PPS P A L + A E Sbjct: 422 EAALRSKVPLPKPAGGDAPPSSPNRPAPPLEKPPPALE 459
>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding| protein MBD6) Length = 1003 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 82 QPSRRATQAGMATSSGGQSSPRAASDLAVIPS 177 QPS T +G +S G +P AAS V+PS Sbjct: 458 QPSLPGTTSGSLSSVPGAPAPPAASKAPVVPS 489
>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)| Length = 606 Score = 27.3 bits (59), Expect = 9.1 Identities = 21/91 (23%), Positives = 32/91 (35%) Frame = +1 Query: 10 PNSHPLARSLTHAHSRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEM 189 P+SHP +L H H++ +A G + A A + + Sbjct: 180 PHSHPHPHALVHPHAK------------------LAAGGGAANGLNVAQYAAAMQQHYAA 221 Query: 190 IVEAIASLREPNGSSQAAIARRIEAAHGAGG 282 A A+ ++ AA A AA G GG Sbjct: 222 AAAAAAARNSAAAAAAAAAAAASAAAAGGGG 252
>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the| cerebellum 5) Length = 639 Score = 27.3 bits (59), Expect = 9.1 Identities = 29/109 (26%), Positives = 39/109 (35%), Gaps = 1/109 (0%) Frame = +1 Query: 49 HSRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPE-MIVEAIASLREPN 225 HSR RD + A A G Q S + P + M + A + P+ Sbjct: 169 HSRDFVLRRDLSATAPAAAMHGAPLGGEQRSGTGSPQHPAPPPHSAGMFISASGTYAGPD 228 Query: 226 GSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAELVAFAGGK 372 GS A+ + GA G P HP L +AAA A G+ Sbjct: 229 GSGGPALFPALHDTPGAPGGHP--HPLNGQMRLGLAAAAAAAAAELYGR 275
>HNF3A_MOUSE (P35582) Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box| protein A1) Length = 468 Score = 27.3 bits (59), Expect = 9.1 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 109 GMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAGGDL 288 G A+ G +P A+ + + L+ P SS A I + GA + Sbjct: 311 GKASQLEGAPAPGPAASPQTLDHSGATATGGASELKSPASSS----APPISSGPGALASV 366 Query: 289 PPSHPAL-VAAHLSRM 333 PPSHPA +A H S++ Sbjct: 367 PPSHPAHGLAPHESQL 382
>H5B_XENLA (P22845) Histone H5B (XLH5B) (H1E) (H1-SB)| Length = 194 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +1 Query: 112 MATSSGGQSSPR---AASDLAVIPSYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAG 279 M +S + PR A+ P Y +MI++A+ + + +GSS+ +I + I+ + G Sbjct: 1 MTENSAPAAKPRRSKASKKSTDHPKYSDMILDAVQAKKSRSGSSRQSIQKYIKNNYTVG 59
>DPO3A_HAEIN (P43743) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1159 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +1 Query: 13 NSHPLARSLTHAHSRTRARERDSQPSRR---ATQAGMATSS 126 +SHP++R L T R +D P+RR +T AG+ +S Sbjct: 962 SSHPVSRYLKELSHYTSTRLKDLAPNRRGQISTVAGLVVAS 1002
>H1B_CHITE (P40276) Histone H1B| Length = 232 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 172 PSYPEMIVEAIASLREPNGSSQAAIARRIEAAH 270 P EM+V A+ +L+E GSS AI + + A + Sbjct: 41 PPVSEMVVNAVKTLKERGGSSLQAIKKFLVAQY 73
>SRP54_ASPNG (Q00179) Signal recognition particle 54 kDa protein homolog| Length = 534 Score = 27.3 bits (59), Expect = 9.1 Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 1/87 (1%) Frame = +1 Query: 52 SRTRARERDSQPSRRATQAGMATSSGGQSSPRAASDLAVIPSYPEMIVEAIASLREPNGS 231 S T RE + S+ AGMA GGQ + + A L+ N Sbjct: 410 SGTTVREVEDLLSQHRMMAGMAKRVGGQK---------------KQMQRAQNMLKGGNKE 454 Query: 232 SQ-AAIARRIEAAHGAGGDLPPSHPAL 309 Q AA+ +R+ A GAGG P P + Sbjct: 455 QQLAAMQKRMAAMGGAGGGGFPGMPGM 481
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/52 (34%), Positives = 22/52 (42%) Frame = +1 Query: 220 PNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAHLSRMSAAAELVAFAGGKY 375 P Q A+A A H +G +H AAHL AA A A G+Y Sbjct: 312 PQQHHQQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAGQY 363
>REPS2_MOUSE (Q80XA6) RalBP1-associated Eps domain-containing protein 2| (RalBP1-interacting protein 2) (Partner of RalBP1) Length = 521 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +3 Query: 9 PQFPPPR-SLTHTRAQSHTRSRERQPAQPAGDAG 107 P PPPR TH+RA S ++ P+ PA ++G Sbjct: 338 PPTPPPRPQKTHSRASSLDLNKVFLPSAPAANSG 371
>PCP3_AMPCA (P80483) Peridinin-chlorophyll a-binding protein 3 (PCP)| Length = 323 Score = 27.3 bits (59), Expect = 9.1 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 9/72 (12%) Frame = +1 Query: 175 SYPEMIVEAIASLREPNGSSQAAIARRIEAAHGAGGDLPPSHPALVAAH---------LS 327 S P A+ L E + + R AAH D S+P LVA+ L+ Sbjct: 39 SNPRQAALAVEKLLETGLTMDPKLVRAAVAAHSKALDTAVSNPKLVASKEDFAAVNEALA 98 Query: 328 RMSAAAELVAFA 363 RM A+A+ FA Sbjct: 99 RMIASADKQKFA 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.124 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,451,753 Number of Sequences: 219361 Number of extensions: 598034 Number of successful extensions: 2469 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 2310 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2457 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
