ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast42a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RS10_ORYSA (Q9AYP4) 40S ribosomal protein S10 174 1e-43
2RS10C_ARATH (Q9LTF2) 40S ribosomal protein S10-3 168 8e-42
3RS10A_ARATH (Q9SW09) 40S ribosomal protein S10-1 167 1e-41
4RS10B_ARATH (Q9FFS8) 40S ribosomal protein S10-2 155 7e-38
5RS10_LUMRU (O77302) 40S ribosomal protein S10 125 5e-29
6RS10_SPOFR (Q962R9) 40S ribosomal protein S10 125 5e-29
7RS10_DICDI (O77082) 40S ribosomal protein S10 120 3e-27
8RS10_ICTPU (Q90YR4) 40S ribosomal protein S10 117 2e-26
9RS10_RAT (P63326) 40S ribosomal protein S10 116 4e-26
10RS10_MOUSE (P63325) 40S ribosomal protein S10 116 4e-26
11RS10_HUMAN (P46783) 40S ribosomal protein S10 116 4e-26
12RS10B_DROME (Q9VWG3) 40S ribosomal protein S10b 115 5e-26
13RS10_XENLA (Q07254) 40S ribosomal protein S10 115 6e-26
14RS10A_YEAST (Q08745) 40S ribosomal protein S10-A 113 2e-25
15RS10B_YEAST (P46784) 40S ribosomal protein S10-B 113 3e-25
16RS10A_DROME (Q9VB14) 40S ribosomal protein S10a 109 3e-24
17RS10B_SCHPO (O13614) 40S ribosomal protein S10-B 107 1e-23
18RS10A_SCHPO (O14112) 40S ribosomal protein S10-A 105 5e-23
19PLEC1_MOUSE (Q9QXS1) Plectin-1 (PLTN) (PCN) (Fragment) 92 1e-18
20PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN) 92 1e-18
21PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal prot... 86 4e-17
22GYRA_BACHD (O50628) DNA gyrase subunit A (EC 5.99.1.3) 31 2.0
23SYTL1_HUMAN (Q8IYJ3) Synaptotagmin-like protein 1 (Exophilin-7) ... 30 2.7
24SNIP1_HUMAN (Q8TAD8) Smad nuclear-interacting protein 1 30 2.7
25CBF3B_YEAST (P40969) Centromere DNA-binding protein complex CBF3... 29 5.9
26MSC6_YEAST (Q08818) Meiotic sister-chromatid recombination prote... 29 5.9
27MRD1_CRYNE (Q5KJL5) Multiple RNA-binding domain-containing prote... 29 7.7

>RS10_ORYSA (Q9AYP4) 40S ribosomal protein S10|
          Length = 183

 Score =  174 bits (440), Expect = 1e-43
 Identities = 82/96 (85%), Positives = 87/96 (90%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 273
           MII KKNR EICKYLFQEGVLYAKKDYNLAKHPQ+D  NL+VIK MQSFKSKEYVRETFS
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKFMQSFKSKEYVRETFS 60

Query: 274 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 381
           WQ+YYWYLTNDGIE L  +LNLPSEIVP TLKKSA+
Sbjct: 61  WQYYYWYLTNDGIEHLLNYLNLPSEIVPATLKKSAR 96



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>RS10C_ARATH (Q9LTF2) 40S ribosomal protein S10-3|
          Length = 179

 Score =  168 bits (425), Expect = 8e-42
 Identities = 76/96 (79%), Positives = 89/96 (92%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 273
           MIIS+ NR+EICKYLF+EGV +AKKD+NLAKHP +D  NL+VIKLMQSFKSKEYVRETF+
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 274 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 381
           W HYYW+LTN+GIEFLRT+LNLPS++VP TLKKSAK
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAK 96



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>RS10A_ARATH (Q9SW09) 40S ribosomal protein S10-1|
          Length = 177

 Score =  167 bits (424), Expect = 1e-41
 Identities = 76/96 (79%), Positives = 88/96 (91%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 273
           MIIS+ NRREICKYLF+EGV +AKKD+NL KHP +D  NL+VIKLMQSFKSKEYVRETF+
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 274 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 381
           W HYYW+LTN+GIEFLRT+LNLPS++VP TLKKSAK
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAK 96



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>RS10B_ARATH (Q9FFS8) 40S ribosomal protein S10-2|
          Length = 180

 Score =  155 bits (391), Expect = 7e-38
 Identities = 73/97 (75%), Positives = 87/97 (89%), Gaps = 1/97 (1%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDA-SNLEVIKLMQSFKSKEYVRETF 270
           MIIS+ NRREI KYLF+EGVL+AKKD+NL +HP +++  NL+VIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 271 SWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 381
           +W HYYW+LTN+GI+FLRT+LNLPSEIVP TLKK  K
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQK 97



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>RS10_LUMRU (O77302) 40S ribosomal protein S10|
          Length = 156

 Score =  125 bits (315), Expect = 5e-29
 Identities = 57/96 (59%), Positives = 75/96 (78%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 273
           M++SKKNR  I +YLF+EGVL AKKD++L KH ++D  NL VI+ MQS  S+ YV+E F 
Sbjct: 1   MLMSKKNRVMIYEYLFKEGVLVAKKDFHLPKHGEIDVPNLHVIRAMQSLVSRGYVKEQFC 60

Query: 274 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 381
           W+HYYWYL N+GI++LR FL+LP EIVP TLK+  +
Sbjct: 61  WRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTR 96



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>RS10_SPOFR (Q962R9) 40S ribosomal protein S10|
          Length = 158

 Score =  125 bits (315), Expect = 5e-29
 Identities = 58/97 (59%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDA-SNLEVIKLMQSFKSKEYVRETF 270
           M++ K+NR  I +YLF+EGV+ AKKDY+  KHP ++   NL+VIK MQS KS+ YV+E F
Sbjct: 1   MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 60

Query: 271 SWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 381
           +W+H+YWYLTN+GIE+LR FL+LP EIVP TLK+S +
Sbjct: 61  AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 97



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>RS10_DICDI (O77082) 40S ribosomal protein S10|
          Length = 153

 Score =  120 bits (300), Expect = 3e-27
 Identities = 52/95 (54%), Positives = 78/95 (82%), Gaps = 1/95 (1%)
 Frame = +1

Query: 97  IISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDA-SNLEVIKLMQSFKSKEYVRETFS 273
           +I  +N+  I +YLFQEGVL A KD++LAKHPQ++  SNL+V+++++SFKS+++V ETF+
Sbjct: 2   LIPTENKLAIYRYLFQEGVLVAPKDFHLAKHPQIETVSNLDVLQILRSFKSRKFVTETFN 61

Query: 274 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSA 378
           WQ+YYW LT +GI++LRT+L +P  +VP T+KK A
Sbjct: 62  WQYYYWVLTEEGIKYLRTYLQVPESVVPATMKKQA 96



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>RS10_ICTPU (Q90YR4) 40S ribosomal protein S10|
          Length = 166

 Score =  117 bits (293), Expect = 2e-26
 Identities = 55/99 (55%), Positives = 76/99 (76%), Gaps = 3/99 (3%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQV---DASNLEVIKLMQSFKSKEYVRE 264
           M++ KKNR  I + LF+EGV+ AKKD +LAKHP++   +  NL V+K MQS KS  YV+E
Sbjct: 1   MLMPKKNRIAIYELLFKEGVMVAKKDVHLAKHPELADKNVPNLHVMKAMQSLKSCGYVKE 60

Query: 265 TFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 381
            F+W+H+YWYLTN+GI++LR FL+LP EIVP TL++  +
Sbjct: 61  QFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTR 99



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>RS10_RAT (P63326) 40S ribosomal protein S10|
          Length = 165

 Score =  116 bits (290), Expect = 4e-26
 Identities = 53/97 (54%), Positives = 76/97 (78%), Gaps = 3/97 (3%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQV---DASNLEVIKLMQSFKSKEYVRE 264
           M++ KKNR  I + LF+EGV+ AKKD ++ KHP++   +  NL V+K MQS KS+ YV+E
Sbjct: 1   MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60

Query: 265 TFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKS 375
            F+W+H+YWYLTN+GI++LR +L+LP EIVP TL++S
Sbjct: 61  QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97



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>RS10_MOUSE (P63325) 40S ribosomal protein S10|
          Length = 165

 Score =  116 bits (290), Expect = 4e-26
 Identities = 53/97 (54%), Positives = 76/97 (78%), Gaps = 3/97 (3%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQV---DASNLEVIKLMQSFKSKEYVRE 264
           M++ KKNR  I + LF+EGV+ AKKD ++ KHP++   +  NL V+K MQS KS+ YV+E
Sbjct: 1   MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60

Query: 265 TFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKS 375
            F+W+H+YWYLTN+GI++LR +L+LP EIVP TL++S
Sbjct: 61  QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97



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>RS10_HUMAN (P46783) 40S ribosomal protein S10|
          Length = 165

 Score =  116 bits (290), Expect = 4e-26
 Identities = 53/97 (54%), Positives = 76/97 (78%), Gaps = 3/97 (3%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQV---DASNLEVIKLMQSFKSKEYVRE 264
           M++ KKNR  I + LF+EGV+ AKKD ++ KHP++   +  NL V+K MQS KS+ YV+E
Sbjct: 1   MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60

Query: 265 TFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKS 375
            F+W+H+YWYLTN+GI++LR +L+LP EIVP TL++S
Sbjct: 61  QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97



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>RS10B_DROME (Q9VWG3) 40S ribosomal protein S10b|
          Length = 160

 Score =  115 bits (289), Expect = 5e-26
 Identities = 54/97 (55%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDA-SNLEVIKLMQSFKSKEYVRETF 270
           M + K +R  I +YLF+EGV+ AKKD++  KHP++++  NL VIK MQS  S+  V+E F
Sbjct: 1   MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60

Query: 271 SWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 381
           +W+HYYWYLTN+GIE LR++L+LP EIVP+TLK+ A+
Sbjct: 61  AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPAR 97



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>RS10_XENLA (Q07254) 40S ribosomal protein S10|
          Length = 165

 Score =  115 bits (288), Expect = 6e-26
 Identities = 53/97 (54%), Positives = 76/97 (78%), Gaps = 3/97 (3%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQV---DASNLEVIKLMQSFKSKEYVRE 264
           M++ KK+R  I + LF+EGV+ AKKD ++ KHP++   +  NL V+K MQS KS+ YV+E
Sbjct: 1   MLMPKKDRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60

Query: 265 TFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKS 375
            F+W+H+YWYLTN+GI++LR FL+LP EIVP TL++S
Sbjct: 61  QFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRS 97



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>RS10A_YEAST (Q08745) 40S ribosomal protein S10-A|
          Length = 105

 Score =  113 bits (283), Expect = 2e-25
 Identities = 51/90 (56%), Positives = 69/90 (76%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 273
           M++ K++R +I +YLFQEGV+ AKKD+N AKH ++D  NL VIK +QS  SK YV+  FS
Sbjct: 1   MLMPKEDRNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFS 60

Query: 274 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNT 363
           WQ+YY+ LT +G+E+LR +LNLP  IVP T
Sbjct: 61  WQYYYYTLTEEGVEYLREYLNLPEHIVPGT 90



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>RS10B_YEAST (P46784) 40S ribosomal protein S10-B|
          Length = 105

 Score =  113 bits (282), Expect = 3e-25
 Identities = 51/90 (56%), Positives = 68/90 (75%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 273
           M++ K+ R +I +YLFQEGV+ AKKD+N AKH ++D  NL VIK +QS  SK YV+  FS
Sbjct: 1   MLMPKQERNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFS 60

Query: 274 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNT 363
           WQ+YY+ LT +G+E+LR +LNLP  IVP T
Sbjct: 61  WQYYYYTLTEEGVEYLREYLNLPEHIVPGT 90



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>RS10A_DROME (Q9VB14) 40S ribosomal protein S10a|
          Length = 163

 Score =  109 bits (273), Expect = 3e-24
 Identities = 53/97 (54%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDA-SNLEVIKLMQSFKSKEYVRETF 270
           M I K NR  I +YLF+EGVL AKKD  + KH ++D   NL+VIK+MQS  S+ +V+E F
Sbjct: 1   MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60

Query: 271 SWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 381
           +W+H+YW LTN+GIE LR +L+LP EIVP+TL ++ +
Sbjct: 61  AWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTR 97



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>RS10B_SCHPO (O13614) 40S ribosomal protein S10-B|
          Length = 147

 Score =  107 bits (268), Expect = 1e-23
 Identities = 48/96 (50%), Positives = 72/96 (75%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 273
           M+I K+NR+ I + LFQ+GVL AKKD+NL KHP+V   NL+VIK  QS  S+ Y++  ++
Sbjct: 1   MLIPKENRKAIHQALFQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYN 60

Query: 274 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 381
           W  +Y+ LTN+G+E+LR +L+LP+E+VP T K+  +
Sbjct: 61  WGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVR 96



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>RS10A_SCHPO (O14112) 40S ribosomal protein S10-A|
          Length = 144

 Score =  105 bits (263), Expect = 5e-23
 Identities = 47/96 (48%), Positives = 71/96 (73%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 273
           M+I K+NR+ I + LF +GVL AKKD+NL KHP+V   NL+VIK  QS  S+ Y++  ++
Sbjct: 1   MLIPKENRKAIHQALFSQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYN 60

Query: 274 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 381
           W  +Y+ LTN+G+E+LR +L+LP+E+VP T K+  +
Sbjct: 61  WGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVR 96



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>PLEC1_MOUSE (Q9QXS1) Plectin-1 (PLTN) (PCN) (Fragment)|
          Length = 964

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 46/95 (48%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYN-LAKHPQVDA-SNLEVIKLMQSFKSKEYVRET 267
           M++     R I + LF+EGV+ AKKD    + HP V   +NL+V++ M S K++  VRET
Sbjct: 5   MLMPLDRLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLKARGLVRET 64

Query: 268 FSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKK 372
           F+W H+YWYLTN+GI+ LR +L+LP EIVP +L++
Sbjct: 65  FAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQR 99



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>PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN)|
          Length = 4687

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 46/95 (48%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYN-LAKHPQVDA-SNLEVIKLMQSFKSKEYVRET 267
           M++     R I + LF+EGV+ AKKD    + HP V   +NL+V++ M S K++  VRET
Sbjct: 5   MLMPLDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMTSLKARGLVRET 64

Query: 268 FSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKK 372
           F+W H+YWYLTN+GI+ LR +L+LP EIVP +L++
Sbjct: 65  FAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQR 99



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>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)|
          Length = 4684

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
 Frame = +1

Query: 94  MIISKKNRREICKYLFQEGVLYAKKDYN-LAKHPQVDA-SNLEVIKLMQSFKSKEYVRET 267
           M++ +   R I + LF+EGV+ AKKD    + HP V   +NL+V++ M S +++  VRET
Sbjct: 5   MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64

Query: 268 FSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKK 372
           F+W H++WYLTN+GI  LR +L+LP EIV  +L++
Sbjct: 65  FAWCHFFWYLTNEGIAHLRQYLHLPPEIVAASLQR 99



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>GYRA_BACHD (O50628) DNA gyrase subunit A (EC 5.99.1.3)|
          Length = 833

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = +1

Query: 88  FAMIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVR-- 261
           F   +   N      +   +G +Y  K Y + +  +  A  + +I L+Q  +  EY+   
Sbjct: 542 FVQHLFTTNSHHTILFFTNKGKVYRLKGYEIPELGRT-AKGIPIINLLQ-IEQDEYISTI 599

Query: 262 ---ETFSWQHYYWYLTNDGI 312
              E F+  HY +++T DGI
Sbjct: 600 IPIEEFTEDHYLFFMTKDGI 619



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>SYTL1_HUMAN (Q8IYJ3) Synaptotagmin-like protein 1 (Exophilin-7) (JFC1 protein)|
           (SB146)
          Length = 562

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
 Frame = +3

Query: 150 SLVRQEGLQPGQAPPGRCLEPRGHQAHAELQVQGVRQGDXXXXXXXXXPDQR-RH*VPPH 326
           S+ R++  +  QAP        GH   AE  V+   +G          P +R R    P 
Sbjct: 105 SMRRKKSTRGDQAP--------GHDREAEAAVKEKEEGPEPRLTIDEAPQERLRETEGPD 156

Query: 327 LPQPAV*DRAQHPQEVRQA 383
            P P+V  +A  P+E  QA
Sbjct: 157 FPSPSVPLKASDPEEASQA 175



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>SNIP1_HUMAN (Q8TAD8) Smad nuclear-interacting protein 1|
          Length = 396

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 17/104 (16%)
 Frame = +3

Query: 120 RDLQVPLPGGSLVRQEGLQPGQAPP---------GRCLEPRGHQA---HAELQVQGV--- 254
           RD  V LP G +V+QE L P  APP         G    P    A   H   + +GV   
Sbjct: 17  RDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRS 76

Query: 255 --RQGDXXXXXXXXXPDQRRH*VPPHLPQPAV*DRAQHPQEVRQ 380
             ++ +         P  +R+  P H       +R  HP+  R+
Sbjct: 77  PPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRE 120



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>CBF3B_YEAST (P40969) Centromere DNA-binding protein complex CBF3 subunit B|
           (Centromere protein 3)
          Length = 608

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
 Frame = +1

Query: 199 DASNLEVIKLMQSFKSKEYVRETFS-WQHYYWYLTNDGI------EFLRTFLNLPSE 348
           D+  ++  KL+ +  SKEY+ +    WQ+Y +++TN G+      +  RT  NL ++
Sbjct: 39  DSECMKSTKLITASSSKEYLPDLLLFWQNYEYWITNIGLYKTKQRDLTRTPANLDTD 95



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>MSC6_YEAST (Q08818) Meiotic sister-chromatid recombination protein 6,|
           mitochondrial precursor
          Length = 692

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 121 EICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRET 267
           ++ K    E V Y +K YNLAK   +  SNL V K++  F    + R T
Sbjct: 599 KLYKSKHSEYVPYIEKYYNLAKDSSIRVSNLAVSKIL--FNLATFARNT 645



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>MRD1_CRYNE (Q5KJL5) Multiple RNA-binding domain-containing protein 1|
          Length = 769

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 274 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKS 375
           W+ + W    D  +    FLNLPS + P+T +K+
Sbjct: 10  WREWKWRGVGDKRQSRLIFLNLPSTLNPDTFRKT 43


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,859,034
Number of Sequences: 219361
Number of extensions: 749008
Number of successful extensions: 2763
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2745
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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