ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast42a05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 476 bits (240), Expect = e-131 Identities = 396/448 (88%) Strand = Plus / Plus Query: 1 tacctcatgacgacggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcac 60 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct: 139 tacctcatgacgacggcgcgcgcggacgcgccgccgtacgggatcgacttcccgacgcac 198 Query: 61 atgcccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctc 120 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 199 atgcccacggggagattctcaaacgggctcaacatcccggacatcatcagcgagtacctc 258 Query: 121 ggggcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtc 180 ||| | |||| || ||||||||||||||||| || | || ||||| ||||| |||||| Sbjct: 259 gggtcccagcctgctctgccgtacctgagcccggacctccgaggcgagaaccttctcgtc 318 Query: 181 ggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtg 240 |||||||||||||| ||||||||||||||||||||||||||||| ||| | || |||||| Sbjct: 319 ggcgccaacttcgcctccgccggcgtcggcatcctcaacgacaccggcatccagttcgtg 378 Query: 241 aacatcatcaggatcgcgcagcagctgcagaacttccaggactaccagcggaggctggcg 300 ||||| || ||||||| ||||||||| | |||||| || |||||||||||| |||||| Sbjct: 379 aacataattaggatcggtcagcagctggacaacttcgagaactaccagcggaatctggcg 438 Query: 301 gcgtacatcggcgaggacgcggcgaggcagcgcgtgagccagtcgctggtgctcatcacc 360 |||| | ||||||||||||||||||||||| ||| |||||||| ||||||||||| Sbjct: 439 gcgttcgtcggcgaggacgcggcgaggcaggtggtgcagcagtcgctcgtgctcatcacg 498 Query: 361 ctcggcggcaacgacttcgtcaacaactactacctggtgcccttctccgccaggtcccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 499 ctcggcggcaacgacttcgtcaacaactactacctggtgccattctccgtcaggtcccga 558 Query: 421 cagttcgagatccacgactacgtcccct 448 ||||||| ||||| || |||||||||| Sbjct: 559 cagttcgccatccaggattacgtcccct 586
>gb|AY106609.1| Zea mays PCO140750 mRNA sequence Length = 634 Score = 444 bits (224), Expect = e-121 Identities = 351/392 (89%), Gaps = 1/392 (0%) Strand = Plus / Plus Query: 1 tacctcatgacgacggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcac 60 ||||||||||| |||||||| || |||||||||||| |||| |||||||||||||||||| Sbjct: 243 tacctcatgaccacggcgcgggccgacgcgccgccctacgggatcgacttccccacgcac 302 Query: 61 atgcccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctc 120 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 303 ctgcccacggggcggttctccaacgggctcaacatccccgacatcatcagcgagcacctc 362 Query: 121 ggggcagagccggcgctgccgtacctgagcccctacatgcgcgg-cgacaacctgctcgt 179 || | |||| |||||||| ||||| |||||| || | ||||| |||| | |||||||| Sbjct: 363 ggctcccagcccgcgctgccctacctcagccccgacctccgcgggcgaccagctgctcgt 422 Query: 180 cggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgt 239 ||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||||| Sbjct: 423 cggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacaccggcatacagttcgt 482 Query: 240 gaacatcatcaggatcgcgcagcagctgcagaacttccaggactaccagcggaggctggc 299 |||||||||| |||||| |||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 483 gaacatcatcgggatcgggcagcagctgcacaacttccaggactaccagcagaggctggc 542 Query: 300 ggcgtacatcggcgaggacgcggcgaggcagcgcgtgagccagtcgctggtgctcatcac 359 |||| | ||||||| ||||||||||||||| ||||||| | |||| || |||||||| Sbjct: 543 cgcgttcgtcggcgacgacgcggcgaggcaggtcgtgagcaatgcgctcgtcctcatcac 602 Query: 360 cctcggcggcaacgacttcgtcaacaactact 391 ||||||||||||||||||||||||||||||| Sbjct: 603 gctcggcggcaacgacttcgtcaacaactact 634
>dbj|AK121383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127I10, full insert sequence Length = 1929 Score = 428 bits (216), Expect = e-117 Identities = 393/448 (87%), Gaps = 3/448 (0%) Strand = Plus / Plus Query: 1 tacctcatgacgacggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcac 60 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct: 641 tacctcatgacgacggcgcgcgcggacgcgccgccgtacgggatcgacttcccgacgcac 700 Query: 61 atgcccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctc 120 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 701 atgcccacggggagattctcaaacgggctcaacatcccggacatcatcagcgagtacctc 760 Query: 121 ggggcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtc 180 ||| | |||| || ||||||||||||||||| || | || ||||| ||||| |||||| Sbjct: 761 gggtcccagcctgctctgccgtacctgagcccggacctccgaggcgagaaccttctcgtc 820 Query: 181 ggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtg 240 |||||||||||||| ||||||||||||||||||||||||||||| ||| | || |||||| Sbjct: 821 ggcgccaacttcgcctccgccggcgtcggcatcctcaacgacaccggcatccagttcgtg 880 Query: 241 aacatcatcaggatcgcgcagcagctgcagaacttccaggactaccagcggaggctggcg 300 ||||| || ||||||| ||||||||| | ||||| | ||||||||||||| ||| || Sbjct: 881 aacataattaggatcggtcagcagctgga-cacttcga-gactaccagcggaatctgccg 938 Query: 301 gcgtacatcggcgaggacgcggcgaggcagcgcgtgagccagtcgctggtgctcatcacc 360 |||| | ||||||||||||||||||||||| ||| |||||||| ||||||||||| Sbjct: 939 gcgttcgtcggcgaggacgcggcgaggcaggtggtgcagcagtcgctcgtgctcatcacg 998 Query: 361 ctcggcggcaacgacttcgtcaacaactactacctggtgcccttctccgccaggtcccag 420 |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 999 ctcggcggcaacgacttcgtcaac-actactacctggtgccattctccgtcaggtcccga 1057 Query: 421 cagttcgagatccacgactacgtcccct 448 ||||||| ||||| || |||||||||| Sbjct: 1058 cagttcgccatccaggattacgtcccct 1085
>ref|XM_466762.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1344 Score = 226 bits (114), Expect = 5e-56 Identities = 237/278 (85%) Strand = Plus / Plus Query: 13 acggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcacatgcccacgggg 72 ||||||||||| ||||||||||| |||||||||||| ||| |||||| | ||||||| Sbjct: 244 acggcgcgcgccgacgcgccgccgtacggcatcgactacccgacgcaccaggccacgggc 303 Query: 73 aggttctccaacgggctcaacatccccgacatcatcagcgagtacctcggggcagagccg 132 ||||||||||||||||||||||||||||||| ||||||||| | || ||||| ||||| Sbjct: 304 cggttctccaacgggctcaacatccccgacattatcagcgagcatcttggggccgagcct 363 Query: 133 gcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgccaacttc 192 || |||||||||||||||| | | || || ||||| |||||||||||||| |||||| Sbjct: 364 gcattgccgtacctgagccctgagctccgaggggacaagctgctcgtcggcgcgaacttc 423 Query: 193 gcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaacatcatcagg 252 ||||| ||||||||||| ||||| || ||||| || ||||||||||||||||| |||||| Sbjct: 424 gcgtcggccggcgtcgggatcctgaatgacaccggggtgcaattcgtgaacataatcagg 483 Query: 253 atcgcgcagcagctgcagaacttccaggactaccagcg 290 |||| | ||||||||| |||||| ||| |||||||| Sbjct: 484 atcggcgatcagctgcagtacttccgggagtaccagcg 521 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 346 ctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccc 402 |||||||||||||| || || |||||||||||||| |||||||||||||| |||||| Sbjct: 577 ctggtgctcatcacgctgggaggcaacgacttcgtgaacaactactacctcgtgccc 633
>dbj|AK108108.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-B09, full insert sequence Length = 1344 Score = 226 bits (114), Expect = 5e-56 Identities = 237/278 (85%) Strand = Plus / Plus Query: 13 acggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcacatgcccacgggg 72 ||||||||||| ||||||||||| |||||||||||| ||| |||||| | ||||||| Sbjct: 244 acggcgcgcgccgacgcgccgccgtacggcatcgactacccgacgcaccaggccacgggc 303 Query: 73 aggttctccaacgggctcaacatccccgacatcatcagcgagtacctcggggcagagccg 132 ||||||||||||||||||||||||||||||| ||||||||| | || ||||| ||||| Sbjct: 304 cggttctccaacgggctcaacatccccgacattatcagcgagcatcttggggccgagcct 363 Query: 133 gcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgccaacttc 192 || |||||||||||||||| | | || || ||||| |||||||||||||| |||||| Sbjct: 364 gcattgccgtacctgagccctgagctccgaggggacaagctgctcgtcggcgcgaacttc 423 Query: 193 gcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaacatcatcagg 252 ||||| ||||||||||| ||||| || ||||| || ||||||||||||||||| |||||| Sbjct: 424 gcgtcggccggcgtcgggatcctgaatgacaccggggtgcaattcgtgaacataatcagg 483 Query: 253 atcgcgcagcagctgcagaacttccaggactaccagcg 290 |||| | ||||||||| |||||| ||| |||||||| Sbjct: 484 atcggcgatcagctgcagtacttccgggagtaccagcg 521 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 346 ctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccc 402 |||||||||||||| || || |||||||||||||| |||||||||||||| |||||| Sbjct: 577 ctggtgctcatcacgctgggaggcaacgacttcgtgaacaactactacctcgtgccc 633
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 196 bits (99), Expect = 4e-47 Identities = 183/211 (86%) Strand = Plus / Plus Query: 238 gtgaacatcatcaggatcgcgcagcagctgcagaacttccaggactaccagcggaggctg 297 |||||||| || ||||||| ||||||||| | |||||| || |||||||||||| ||| Sbjct: 126807 gtgaacataattaggatcggtcagcagctggacaacttcgagaactaccagcggaatctg 126866 Query: 298 gcggcgtacatcggcgaggacgcggcgaggcagcgcgtgagccagtcgctggtgctcatc 357 ||||||| | ||||||||||||||||||||||| ||| |||||||| ||||||||| Sbjct: 126867 gcggcgttcgtcggcgaggacgcggcgaggcaggtggtgcagcagtcgctcgtgctcatc 126926 Query: 358 accctcggcggcaacgacttcgtcaacaactactacctggtgcccttctccgccaggtcc 417 || ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 126927 acgctcggcggcaacgacttcgtcaacaactactacctggtgccattctccgtcaggtcc 126986 Query: 418 cagcagttcgagatccacgactacgtcccct 448 | ||||||| ||||| || |||||||||| Sbjct: 126987 cgacagttcgccatccaggattacgtcccct 127017 Score = 163 bits (82), Expect = 6e-37 Identities = 103/110 (93%) Strand = Plus / Plus Query: 1 tacctcatgacgacggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcac 60 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct: 126383 tacctcatgacgacggcgcgcgcggacgcgccgccgtacgggatcgacttcccgacgcac 126442 Query: 61 atgcccacggggaggttctccaacgggctcaacatccccgacatcatcag 110 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 126443 atgcccacggggagattctcaaacgggctcaacatcccggacatcatcag 126492 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 110 gcgagtacctcggggcagagccggcgctgccgtacctgagcccctacatgcgcggcgaca 169 |||||||||||||| | |||| || ||||||||||||||||| || | || ||||| | Sbjct: 126597 gcgagtacctcgggtcccagcctgctctgccgtacctgagcccggacctccgaggcgaga 126656 Query: 170 acctgctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacac 224 |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 126657 accttctcgtcggcgccaacttcgcctccgccggcgtcggcatcctcaacgacac 126711
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 196 bits (99), Expect = 4e-47 Identities = 183/211 (86%) Strand = Plus / Plus Query: 238 gtgaacatcatcaggatcgcgcagcagctgcagaacttccaggactaccagcggaggctg 297 |||||||| || ||||||| ||||||||| | |||||| || |||||||||||| ||| Sbjct: 69427 gtgaacataattaggatcggtcagcagctggacaacttcgagaactaccagcggaatctg 69486 Query: 298 gcggcgtacatcggcgaggacgcggcgaggcagcgcgtgagccagtcgctggtgctcatc 357 ||||||| | ||||||||||||||||||||||| ||| |||||||| ||||||||| Sbjct: 69487 gcggcgttcgtcggcgaggacgcggcgaggcaggtggtgcagcagtcgctcgtgctcatc 69546 Query: 358 accctcggcggcaacgacttcgtcaacaactactacctggtgcccttctccgccaggtcc 417 || ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 69547 acgctcggcggcaacgacttcgtcaacaactactacctggtgccattctccgtcaggtcc 69606 Query: 418 cagcagttcgagatccacgactacgtcccct 448 | ||||||| ||||| || |||||||||| Sbjct: 69607 cgacagttcgccatccaggattacgtcccct 69637 Score = 163 bits (82), Expect = 6e-37 Identities = 103/110 (93%) Strand = Plus / Plus Query: 1 tacctcatgacgacggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcac 60 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct: 69003 tacctcatgacgacggcgcgcgcggacgcgccgccgtacgggatcgacttcccgacgcac 69062 Query: 61 atgcccacggggaggttctccaacgggctcaacatccccgacatcatcag 110 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 69063 atgcccacggggagattctcaaacgggctcaacatcccggacatcatcag 69112 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 110 gcgagtacctcggggcagagccggcgctgccgtacctgagcccctacatgcgcggcgaca 169 |||||||||||||| | |||| || ||||||||||||||||| || | || ||||| | Sbjct: 69217 gcgagtacctcgggtcccagcctgctctgccgtacctgagcccggacctccgaggcgaga 69276 Query: 170 acctgctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacac 224 |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 69277 accttctcgtcggcgccaacttcgcctccgccggcgtcggcatcctcaacgacac 69331
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 196 bits (99), Expect = 4e-47 Identities = 183/211 (86%) Strand = Plus / Plus Query: 238 gtgaacatcatcaggatcgcgcagcagctgcagaacttccaggactaccagcggaggctg 297 |||||||| || ||||||| ||||||||| | |||||| || |||||||||||| ||| Sbjct: 25342868 gtgaacataattaggatcggtcagcagctggacaacttcgagaactaccagcggaatctg 25342927 Query: 298 gcggcgtacatcggcgaggacgcggcgaggcagcgcgtgagccagtcgctggtgctcatc 357 ||||||| | ||||||||||||||||||||||| ||| |||||||| ||||||||| Sbjct: 25342928 gcggcgttcgtcggcgaggacgcggcgaggcaggtggtgcagcagtcgctcgtgctcatc 25342987 Query: 358 accctcggcggcaacgacttcgtcaacaactactacctggtgcccttctccgccaggtcc 417 || ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 25342988 acgctcggcggcaacgacttcgtcaacaactactacctggtgccattctccgtcaggtcc 25343047 Query: 418 cagcagttcgagatccacgactacgtcccct 448 | ||||||| ||||| || |||||||||| Sbjct: 25343048 cgacagttcgccatccaggattacgtcccct 25343078 Score = 163 bits (82), Expect = 6e-37 Identities = 103/110 (93%) Strand = Plus / Plus Query: 1 tacctcatgacgacggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcac 60 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct: 25342444 tacctcatgacgacggcgcgcgcggacgcgccgccgtacgggatcgacttcccgacgcac 25342503 Query: 61 atgcccacggggaggttctccaacgggctcaacatccccgacatcatcag 110 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 25342504 atgcccacggggagattctcaaacgggctcaacatcccggacatcatcag 25342553 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 110 gcgagtacctcggggcagagccggcgctgccgtacctgagcccctacatgcgcggcgaca 169 |||||||||||||| | |||| || ||||||||||||||||| || | || ||||| | Sbjct: 25342658 gcgagtacctcgggtcccagcctgctctgccgtacctgagcccggacctccgaggcgaga 25342717 Query: 170 acctgctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacac 224 |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 25342718 accttctcgtcggcgccaacttcgcctccgccggcgtcggcatcctcaacgacac 25342772
>ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative early nodulin gene (Enod) related protein (OSJNBa0071K18.9), mRNA Length = 1384 Score = 180 bits (91), Expect = 3e-42 Identities = 160/183 (87%) Strand = Plus / Plus Query: 64 cccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctcggg 123 |||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| Sbjct: 225 cccacggggaggttctccaatggcctcaacatcccggacatcatcagcgagcacctcggc 284 Query: 124 gcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggc 183 || ||||| | || || ||||| ||||| || | ||||||| ||| || ||||||||| Sbjct: 285 gccgagcccaccctcccttacctcagcccggacctccgcggcgccaagctcctcgtcggc 344 Query: 184 gccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaac 243 ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 345 gccaacttcgcctccgccggcgtcggcatcctcaacgacaccggcatccaattcgtgaac 404 Query: 244 atc 246 ||| Sbjct: 405 atc 407 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 344 cgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccct 403 |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 505 cgctcgtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctcgtcccct 564 Query: 404 tctccgccaggtcccagcagttcgagatccacgactacgtccccttc 450 ||||| | | ||||||||||||| ||| ||||||||||| |||| Sbjct: 565 tctccctccgctcccagcagttcgccctccccgactacgtccgcttc 611
>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full insert sequence Length = 1375 Score = 180 bits (91), Expect = 3e-42 Identities = 160/183 (87%) Strand = Plus / Plus Query: 64 cccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctcggg 123 |||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| Sbjct: 237 cccacggggaggttctccaatggcctcaacatcccggacatcatcagcgagcacctcggc 296 Query: 124 gcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggc 183 || ||||| | || || ||||| ||||| || | ||||||| ||| || ||||||||| Sbjct: 297 gccgagcccaccctcccttacctcagcccggacctccgcggcgccaagctcctcgtcggc 356 Query: 184 gccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaac 243 ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 357 gccaacttcgcctccgccggcgtcggcatcctcaacgacaccggcatccaattcgtgaac 416 Query: 244 atc 246 ||| Sbjct: 417 atc 419 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 344 cgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccct 403 |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 517 cgctcgtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctcgtcccct 576 Query: 404 tctccgccaggtcccagcagttcgagatccacgactacgtccccttc 450 ||||| | | ||||||||||||| ||| ||||||||||| |||| Sbjct: 577 tctccctccgctcccagcagttcgccctccccgactacgtccgcttc 623
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 170 bits (86), Expect = 2e-39 Identities = 155/178 (87%) Strand = Plus / Minus Query: 64 cccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctcggg 123 |||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| Sbjct: 103248 cccacggggaggttctccaatggcctcaacatcccggacatcatcagcgagcacctcggc 103189 Query: 124 gcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggc 183 || ||||| | || || ||||| ||||| || | ||||||| ||| || ||||||||| Sbjct: 103188 gccgagcccaccctcccttacctcagcccggacctccgcggcgccaagctcctcgtcggc 103129 Query: 184 gccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtga 241 ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||| Sbjct: 103128 gccaacttcgcctccgccggcgtcggcatcctcaacgacaccggcatccaattcgtga 103071 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 344 cgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccct 403 |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 102881 cgctcgtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctcgtcccct 102822 Query: 404 tctccgccaggtcccagcagttcgagatccacgactacgtccccttc 450 ||||| | | ||||||||||||| ||| ||||||||||| |||| Sbjct: 102821 tctccctccgctcccagcagttcgccctccccgactacgtccgcttc 102775
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 170 bits (86), Expect = 2e-39 Identities = 155/178 (87%) Strand = Plus / Plus Query: 64 cccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctcggg 123 |||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| Sbjct: 16556994 cccacggggaggttctccaatggcctcaacatcccggacatcatcagcgagcacctcggc 16557053 Query: 124 gcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggc 183 || ||||| | || || ||||| ||||| || | ||||||| ||| || ||||||||| Sbjct: 16557054 gccgagcccaccctcccttacctcagcccggacctccgcggcgccaagctcctcgtcggc 16557113 Query: 184 gccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtga 241 ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||| Sbjct: 16557114 gccaacttcgcctccgccggcgtcggcatcctcaacgacaccggcatccaattcgtga 16557171 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 344 cgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccct 403 |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 16557361 cgctcgtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctcgtcccct 16557420 Query: 404 tctccgccaggtcccagcagttcgagatccacgactacgtccccttc 450 ||||| | | ||||||||||||| ||| ||||||||||| |||| Sbjct: 16557421 tctccctccgctcccagcagttcgccctccccgactacgtccgcttc 16557467
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 170 bits (86), Expect = 2e-39 Identities = 155/178 (87%) Strand = Plus / Plus Query: 64 cccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctcggg 123 |||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| Sbjct: 16565235 cccacggggaggttctccaatggcctcaacatcccggacatcatcagcgagcacctcggc 16565294 Query: 124 gcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggc 183 || ||||| | || || ||||| ||||| || | ||||||| ||| || ||||||||| Sbjct: 16565295 gccgagcccaccctcccttacctcagcccggacctccgcggcgccaagctcctcgtcggc 16565354 Query: 184 gccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtga 241 ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||| Sbjct: 16565355 gccaacttcgcctccgccggcgtcggcatcctcaacgacaccggcatccaattcgtga 16565412 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 344 cgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccct 403 |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 16565602 cgctcgtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctcgtcccct 16565661 Query: 404 tctccgccaggtcccagcagttcgagatccacgactacgtccccttc 450 ||||| | | ||||||||||||| ||| ||||||||||| |||| Sbjct: 16565662 tctccctccgctcccagcagttcgccctccccgactacgtccgcttc 16565708
>ref|XM_483839.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1523 Score = 143 bits (72), Expect = 6e-31 Identities = 186/224 (83%) Strand = Plus / Plus Query: 1 tacctcatgacgacggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcac 60 ||||| |||||||||||||| |||||| |||||||| ||||| | |||| ||| || ||| Sbjct: 264 tacctgatgacgacggcgcgggcggactcgccgccctacggcgtggactacccgacccac 323 Query: 61 atgcccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctc 120 |||||||| | |||||||| || |||||| |||||||||||||||||||||||||| Sbjct: 324 cgcgccacggggcgcttctccaatggcctcaacgtccccgacatcatcagcgagtacctc 383 Query: 121 ggggcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtc 180 || || || | | |||||| ||||| ||||| || || ||| ||| |||||| | Sbjct: 384 ggcgccgaatccgtgctgccttacctcagcccgcacctggacggacccaagctgctccac 443 Query: 181 ggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacac 224 |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 444 ggcgccaacttcgcctccgccggcgtcggcatcctcaacgacac 487 Score = 119 bits (60), Expect = 8e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 344 cgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccct 403 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| | Sbjct: 607 cgctggtgctcatcacgctcggcggcaacgacttcatcaacaactactacctggtgccat 666 Query: 404 tctccgccaggtcccagcagttcg 427 |||| |||||||||| | |||||| Sbjct: 667 tctcagccaggtcccgggagttcg 690
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 143 bits (72), Expect = 6e-31 Identities = 186/224 (83%) Strand = Plus / Plus Query: 1 tacctcatgacgacggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcac 60 ||||| |||||||||||||| |||||| |||||||| ||||| | |||| ||| || ||| Sbjct: 28339398 tacctgatgacgacggcgcgggcggactcgccgccctacggcgtggactacccgacccac 28339457 Query: 61 atgcccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctc 120 |||||||| | |||||||| || |||||| |||||||||||||||||||||||||| Sbjct: 28339458 cgcgccacggggcgcttctccaatggcctcaacgtccccgacatcatcagcgagtacctc 28339517 Query: 121 ggggcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtc 180 || || || | | |||||| ||||| ||||| || || ||| ||| |||||| | Sbjct: 28339518 ggcgccgaatccgtgctgccttacctcagcccgcacctggacggacccaagctgctccac 28339577 Query: 181 ggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacac 224 |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 28339578 ggcgccaacttcgcctccgccggcgtcggcatcctcaacgacac 28339621 Score = 119 bits (60), Expect = 8e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 344 cgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccct 403 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| | Sbjct: 28339852 cgctggtgctcatcacgctcggcggcaacgacttcatcaacaactactacctggtgccat 28339911 Query: 404 tctccgccaggtcccagcagttcg 427 |||| |||||||||| | |||||| Sbjct: 28339912 tctcagccaggtcccgggagttcg 28339935 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cgacggcgcgcgcggacgcg 30 |||||||||||||||||||| Sbjct: 18200070 cgacggcgcgcgcggacgcg 18200089
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 143 bits (72), Expect = 6e-31 Identities = 186/224 (83%) Strand = Plus / Plus Query: 1 tacctcatgacgacggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcac 60 ||||| |||||||||||||| |||||| |||||||| ||||| | |||| ||| || ||| Sbjct: 68204 tacctgatgacgacggcgcgggcggactcgccgccctacggcgtggactacccgacccac 68263 Query: 61 atgcccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctc 120 |||||||| | |||||||| || |||||| |||||||||||||||||||||||||| Sbjct: 68264 cgcgccacggggcgcttctccaatggcctcaacgtccccgacatcatcagcgagtacctc 68323 Query: 121 ggggcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtc 180 || || || | | |||||| ||||| ||||| || || ||| ||| |||||| | Sbjct: 68324 ggcgccgaatccgtgctgccttacctcagcccgcacctggacggacccaagctgctccac 68383 Query: 181 ggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacac 224 |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 68384 ggcgccaacttcgcctccgccggcgtcggcatcctcaacgacac 68427 Score = 119 bits (60), Expect = 8e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 344 cgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccct 403 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| | Sbjct: 68658 cgctggtgctcatcacgctcggcggcaacgacttcatcaacaactactacctggtgccat 68717 Query: 404 tctccgccaggtcccagcagttcg 427 |||| |||||||||| | |||||| Sbjct: 68718 tctcagccaggtcccgggagttcg 68741
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 143 bits (72), Expect = 6e-31 Identities = 186/224 (83%) Strand = Plus / Plus Query: 1 tacctcatgacgacggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcac 60 ||||| |||||||||||||| |||||| |||||||| ||||| | |||| ||| || ||| Sbjct: 131213 tacctgatgacgacggcgcgggcggactcgccgccctacggcgtggactacccgacccac 131272 Query: 61 atgcccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctc 120 |||||||| | |||||||| || |||||| |||||||||||||||||||||||||| Sbjct: 131273 cgcgccacggggcgcttctccaatggcctcaacgtccccgacatcatcagcgagtacctc 131332 Query: 121 ggggcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtc 180 || || || | | |||||| ||||| ||||| || || ||| ||| |||||| | Sbjct: 131333 ggcgccgaatccgtgctgccttacctcagcccgcacctggacggacccaagctgctccac 131392 Query: 181 ggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacac 224 |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131393 ggcgccaacttcgcctccgccggcgtcggcatcctcaacgacac 131436 Score = 119 bits (60), Expect = 8e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 344 cgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccct 403 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| | Sbjct: 131667 cgctggtgctcatcacgctcggcggcaacgacttcatcaacaactactacctggtgccat 131726 Query: 404 tctccgccaggtcccagcagttcg 427 |||| |||||||||| | |||||| Sbjct: 131727 tctcagccaggtcccgggagttcg 131750
>dbj|AK106778.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H02, full insert sequence Length = 1523 Score = 135 bits (68), Expect = 1e-28 Identities = 185/224 (82%) Strand = Plus / Plus Query: 1 tacctcatgacgacggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcac 60 ||||| |||||||||||||| |||||| |||||||| ||||| | |||| ||| || ||| Sbjct: 264 tacctgatgacgacggcgcgggcggactcgccgccctacggcgtggactacccgacccac 323 Query: 61 atgcccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctc 120 |||||||| | |||||||| || |||||| |||||||||||||||||||||||||| Sbjct: 324 cgcgccacggggcgcttctccaatggcctcaacgtccccgacatcatcagcgagtacctc 383 Query: 121 ggggcagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtc 180 || || || | | |||||| ||||| ||||| || || ||| ||| |||||| | Sbjct: 384 ggcgccgaatccgtgctgccttacctcagcccgcacctggacggacccaagctgctccac 443 Query: 181 ggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacac 224 |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 444 ggcgccaacttcgcctccgcctgcgtcggcatcctcaacgacac 487 Score = 119 bits (60), Expect = 8e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 344 cgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccct 403 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| | Sbjct: 607 cgctggtgctcatcacgctcggcggcaacgacttcatcaacaactactacctggtgccat 666 Query: 404 tctccgccaggtcccagcagttcg 427 |||| |||||||||| | |||||| Sbjct: 667 tctcagccaggtcccgggagttcg 690
>ref|XM_468393.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1517 Score = 121 bits (61), Expect = 2e-24 Identities = 154/185 (83%) Strand = Plus / Plus Query: 65 ccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctcgggg 124 |||| |||||||||||||| || ||||| || ||||| ||||| ||| |||| || | Sbjct: 275 ccaccgggaggttctccaatggcaagaacatgcctgacattatcagtgagcacctgggag 334 Query: 125 cagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcg 184 | ||||||| | |||||||||||||||| | || |||||||| ||||||||||||| Sbjct: 335 ctgagccggtgttgccgtacctgagcccggagctggacggcgacaggctgctcgtcggcg 394 Query: 185 ccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaaca 244 | ||||||||||| |||||| |||||||||| |||||||| |||||||| |||| ||||| Sbjct: 395 cgaacttcgcgtcggccggcatcggcatcctgaacgacaccggcgtgcagttcgcgaaca 454 Query: 245 tcatc 249 ||||| Sbjct: 455 tcatc 459 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 342 gtcgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacct 395 |||||||| ||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 552 gtcgctggcgctcatcacgctgggcggcaacgacttcgtgaacaactactacct 605
>ref|XM_507548.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.14 mRNA Length = 1525 Score = 121 bits (61), Expect = 2e-24 Identities = 154/185 (83%) Strand = Plus / Plus Query: 65 ccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctcgggg 124 |||| |||||||||||||| || ||||| || ||||| ||||| ||| |||| || | Sbjct: 275 ccaccgggaggttctccaatggcaagaacatgcctgacattatcagtgagcacctgggag 334 Query: 125 cagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcg 184 | ||||||| | |||||||||||||||| | || |||||||| ||||||||||||| Sbjct: 335 ctgagccggtgttgccgtacctgagcccggagctggacggcgacaggctgctcgtcggcg 394 Query: 185 ccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaaca 244 | ||||||||||| |||||| |||||||||| |||||||| |||||||| |||| ||||| Sbjct: 395 cgaacttcgcgtcggccggcatcggcatcctgaacgacaccggcgtgcagttcgcgaaca 454 Query: 245 tcatc 249 ||||| Sbjct: 455 tcatc 459 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 342 gtcgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacct 395 |||||||| ||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 552 gtcgctggcgctcatcacgctgggcggcaacgacttcgtgaacaactactacct 605
>ref|XM_507046.2| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.14 mRNA Length = 1558 Score = 121 bits (61), Expect = 2e-24 Identities = 154/185 (83%) Strand = Plus / Plus Query: 65 ccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctcgggg 124 |||| |||||||||||||| || ||||| || ||||| ||||| ||| |||| || | Sbjct: 275 ccaccgggaggttctccaatggcaagaacatgcctgacattatcagtgagcacctgggag 334 Query: 125 cagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcg 184 | ||||||| | |||||||||||||||| | || |||||||| ||||||||||||| Sbjct: 335 ctgagccggtgttgccgtacctgagcccggagctggacggcgacaggctgctcgtcggcg 394 Query: 185 ccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaaca 244 | ||||||||||| |||||| |||||||||| |||||||| |||||||| |||| ||||| Sbjct: 395 cgaacttcgcgtcggccggcatcggcatcctgaacgacaccggcgtgcagttcgcgaaca 454 Query: 245 tcatc 249 ||||| Sbjct: 455 tcatc 459 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 342 gtcgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacct 395 |||||||| ||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 552 gtcgctggcgctcatcacgctgggcggcaacgacttcgtgaacaactactacct 605
>dbj|AK106084.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B01, full insert sequence Length = 1525 Score = 121 bits (61), Expect = 2e-24 Identities = 154/185 (83%) Strand = Plus / Plus Query: 65 ccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctcgggg 124 |||| |||||||||||||| || ||||| || ||||| ||||| ||| |||| || | Sbjct: 275 ccaccgggaggttctccaatggcaagaacatgcctgacattatcagtgagcacctgggag 334 Query: 125 cagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcg 184 | ||||||| | |||||||||||||||| | || |||||||| ||||||||||||| Sbjct: 335 ctgagccggtgttgccgtacctgagcccggagctggacggcgacaggctgctcgtcggcg 394 Query: 185 ccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaaca 244 | ||||||||||| |||||| |||||||||| |||||||| |||||||| |||| ||||| Sbjct: 395 cgaacttcgcgtcggccggcatcggcatcctgaacgacaccggcgtgcagttcgcgaaca 454 Query: 245 tcatc 249 ||||| Sbjct: 455 tcatc 459 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 342 gtcgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacct 395 |||||||| ||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 552 gtcgctggcgctcatcacgctgggcggcaacgacttcgtgaacaactactacct 605
>dbj|AK099251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154O11, full insert sequence Length = 1517 Score = 121 bits (61), Expect = 2e-24 Identities = 154/185 (83%) Strand = Plus / Plus Query: 65 ccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctcgggg 124 |||| |||||||||||||| || ||||| || ||||| ||||| ||| |||| || | Sbjct: 275 ccaccgggaggttctccaatggcaagaacatgcctgacattatcagtgagcacctgggag 334 Query: 125 cagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcg 184 | ||||||| | |||||||||||||||| | || |||||||| ||||||||||||| Sbjct: 335 ctgagccggtgttgccgtacctgagcccggagctggacggcgacaggctgctcgtcggcg 394 Query: 185 ccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaaca 244 | ||||||||||| |||||| |||||||||| |||||||| |||||||| |||| ||||| Sbjct: 395 cgaacttcgcgtcggccggcatcggcatcctgaacgacaccggcgtgcagttcgcgaaca 454 Query: 245 tcatc 249 ||||| Sbjct: 455 tcatc 459 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 342 gtcgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacct 395 |||||||| ||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 552 gtcgctggcgctcatcacgctgggcggcaacgacttcgtgaacaactactacct 605
>dbj|AK060243.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G01, full insert sequence Length = 1558 Score = 121 bits (61), Expect = 2e-24 Identities = 154/185 (83%) Strand = Plus / Plus Query: 65 ccacggggaggttctccaacgggctcaacatccccgacatcatcagcgagtacctcgggg 124 |||| |||||||||||||| || ||||| || ||||| ||||| ||| |||| || | Sbjct: 275 ccaccgggaggttctccaatggcaagaacatgcctgacattatcagtgagcacctgggag 334 Query: 125 cagagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcg 184 | ||||||| | |||||||||||||||| | || |||||||| ||||||||||||| Sbjct: 335 ctgagccggtgttgccgtacctgagcccggagctggacggcgacaggctgctcgtcggcg 394 Query: 185 ccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaaca 244 | ||||||||||| |||||| |||||||||| |||||||| |||||||| |||| ||||| Sbjct: 395 cgaacttcgcgtcggccggcatcggcatcctgaacgacaccggcgtgcagttcgcgaaca 454 Query: 245 tcatc 249 ||||| Sbjct: 455 tcatc 459 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 342 gtcgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacct 395 |||||||| ||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 552 gtcgctggcgctcatcacgctgggcggcaacgacttcgtgaacaactactacct 605
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 75 gttctccaacgggctcaacatccccgacatcatcagcgagtacctcggggcagagccggc 134 ||||||||| || ||||||||||| |||||||||| |||| ||||||| || |||||| | Sbjct: 17888879 gttctccaatggcctcaacatcccggacatcatcaacgagcacctcggcgccgagccgac 17888820 Query: 135 gctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgccaacttcgc 194 || || ||||| ||||| || | || |||| ||| || |||||||||||||||||||| Sbjct: 17888819 cctcccttacctcagcccggaccttcgtggcgccaagctcctcgtcggcgccaacttcgc 17888760 Query: 195 gtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtga 241 ||||| |||||||||||||||||||||| ||| | || ||||||| Sbjct: 17888759 ctccgctagcgtcggcatcctcaacgacaccggcatccagttcgtga 17888713 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 349 gtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgcccttctcc 408 |||||||||||||||||||||||||||||| | | |||||||||||| || || |||||| Sbjct: 17888525 gtgctcatcaccctcggcggcaacgacttcatgaccaactactacctcgtccctttctcc 17888466 Query: 409 gccaggtcccagcagttcgagatccacgactacgtccccttc 450 | ||||||||||||| ||| ||||||||||| |||| Sbjct: 17888465 cttcgctcccagcagttcgccctccccgactacgtccgcttc 17888424
>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 75 gttctccaacgggctcaacatccccgacatcatcagcgagtacctcggggcagagccggc 134 ||||||||| || ||||||||||| |||||||||| |||| ||||||| || |||||| | Sbjct: 8714 gttctccaatggcctcaacatcccggacatcatcaacgagcacctcggcgccgagccgac 8655 Query: 135 gctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgccaacttcgc 194 || || ||||| ||||| || | || |||| ||| || |||||||||||||||||||| Sbjct: 8654 cctcccttacctcagcccggaccttcgtggcgccaagctcctcgtcggcgccaacttcgc 8595 Query: 195 gtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtga 241 ||||| |||||||||||||||||||||| ||| | || ||||||| Sbjct: 8594 ctccgctagcgtcggcatcctcaacgacaccggcatccagttcgtga 8548 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 349 gtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgcccttctcc 408 |||||||||||||||||||||||||||||| | | |||||||||||| || || |||||| Sbjct: 8360 gtgctcatcaccctcggcggcaacgacttcatgaccaactactacctcgtccctttctcc 8301 Query: 409 gccaggtcccagcagttcgagatccacgactacgtccccttc 450 | ||||||||||||| ||| ||||||||||| |||| Sbjct: 8300 cttcgctcccagcagttcgccctccccgactacgtccgcttc 8259
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455H03 Length = 175947 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 75 gttctccaacgggctcaacatccccgacatcatcagcgagtacctcggggcagagccggc 134 ||||||||| || ||||||||||| |||||||||| |||| ||||||| || |||||| | Sbjct: 136001 gttctccaatggcctcaacatcccggacatcatcaacgagcacctcggcgccgagccgac 135942 Query: 135 gctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgccaacttcgc 194 || || ||||| ||||| || | || |||| ||| || |||||||||||||||||||| Sbjct: 135941 cctcccttacctcagcccggaccttcgtggcgccaagctcctcgtcggcgccaacttcgc 135882 Query: 195 gtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtga 241 ||||| |||||||||||||||||||||| ||| | || ||||||| Sbjct: 135881 ctccgctagcgtcggcatcctcaacgacaccggcatccagttcgtga 135835 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 349 gtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgcccttctcc 408 |||||||||||||||||||||||||||||| | | |||||||||||| || || |||||| Sbjct: 135647 gtgctcatcaccctcggcggcaacgacttcatgaccaactactacctcgtccctttctcc 135588 Query: 409 gccaggtcccagcagttcgagatccacgactacgtccccttc 450 | ||||||||||||| ||| ||||||||||| |||| Sbjct: 135587 cttcgctcccagcagttcgccctccccgactacgtccgcttc 135546
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 109 bits (55), Expect = 8e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 127 gagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgcc 186 ||||||| | |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 34987311 gagccggtgttgccgtacctgagcccggagctggacggcgacaggctgctcgtcggcgcg 34987252 Query: 187 aacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaacatc 246 ||||||||||| |||||| |||||||||| |||||||| |||||||| |||| ||||||| Sbjct: 34987251 aacttcgcgtcggccggcatcggcatcctgaacgacaccggcgtgcagttcgcgaacatc 34987192 Query: 247 atc 249 ||| Sbjct: 34987191 atc 34987189 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 13 acggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcacatgcccacgggg 72 ||||||||||| ||||||||||| |||||||||||| ||| |||||| | ||||||| Sbjct: 24536010 acggcgcgcgccgacgcgccgccgtacggcatcgactacccgacgcaccaggccacgggc 24536069 Query: 73 aggttctccaacgggctcaacatccccgacatcatcag 110 ||||||||||||||||||||||||||||||| ||||| Sbjct: 24536070 cggttctccaacgggctcaacatccccgacattatcag 24536107 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 137 tgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgccaacttcgcgt 196 |||||||||||||||| | | || || ||||| |||||||||||||| |||||||||| Sbjct: 24536223 tgccgtacctgagccctgagctccgaggggacaagctgctcgtcggcgcgaacttcgcgt 24536282 Query: 197 ccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgt 239 | ||||||||||| ||||| || ||||| || ||||||||||| Sbjct: 24536283 cggccggcgtcgggatcctgaatgacaccggggtgcaattcgt 24536325 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 342 gtcgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacct 395 |||||||| ||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 34987096 gtcgctggcgctcatcacgctgggcggcaacgacttcgtgaacaactactacct 34987043 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 346 ctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccc 402 |||||||||||||| || || |||||||||||||| |||||||||||||| |||||| Sbjct: 24536547 ctggtgctcatcacgctgggaggcaacgacttcgtgaacaactactacctcgtgccc 24536603 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 175 ctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgt 230 |||| ||||| |||||||||||||| ||||| |||||| || ||||| || ||||| Sbjct: 30574339 ctcggcggcgtcaacttcgcgtccggcggcgccggcattctgaacgagacgggcgt 30574284
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 109 bits (55), Expect = 8e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 127 gagccggcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgcc 186 ||||||| | |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 47652 gagccggtgttgccgtacctgagcccggagctggacggcgacaggctgctcgtcggcgcg 47593 Query: 187 aacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgtgaacatc 246 ||||||||||| |||||| |||||||||| |||||||| |||||||| |||| ||||||| Sbjct: 47592 aacttcgcgtcggccggcatcggcatcctgaacgacaccggcgtgcagttcgcgaacatc 47533 Query: 247 atc 249 ||| Sbjct: 47532 atc 47530 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 342 gtcgctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacct 395 |||||||| ||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 47437 gtcgctggcgctcatcacgctgggcggcaacgacttcgtgaacaactactacct 47384
>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1014_H03 Length = 132696 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 13 acggcgcgcgcggacgcgccgccccacggcatcgacttccccacgcacatgcccacgggg 72 ||||||||||| ||||||||||| |||||||||||| ||| |||||| | ||||||| Sbjct: 50111 acggcgcgcgccgacgcgccgccgtacggcatcgactacccgacgcaccaggccacgggc 50170 Query: 73 aggttctccaacgggctcaacatccccgacatcatcag 110 ||||||||||||||||||||||||||||||| ||||| Sbjct: 50171 cggttctccaacgggctcaacatccccgacattatcag 50208 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 137 tgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgccaacttcgcgt 196 |||||||||||||||| | | || || ||||| |||||||||||||| |||||||||| Sbjct: 50324 tgccgtacctgagccctgagctccgaggggacaagctgctcgtcggcgcgaacttcgcgt 50383 Query: 197 ccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgt 239 | ||||||||||| ||||| || ||||| || ||||||||||| Sbjct: 50384 cggccggcgtcgggatcctgaatgacaccggggtgcaattcgt 50426 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 346 ctggtgctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgccc 402 |||||||||||||| || || |||||||||||||| |||||||||||||| |||||| Sbjct: 50648 ctggtgctcatcacgctgggaggcaacgacttcgtgaacaactactacctcgtgccc 50704
>gb|AC104846.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0004C07, complete sequence Length = 135425 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 133 gcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgccaacttc 192 |||||||| |||||||||||| || | || ||||| |||||||| ||| ||||||||||| Sbjct: 42106 gcgctgccttacctgagccccgacctccgaggcgagaacctgcttgtctgcgccaacttc 42047 Query: 193 gcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgt 239 || |||||||| ||| |||||||||||||||| ||| | |||||||| Sbjct: 42046 gcctccgccggtgtcagcatcctcaacgacaccggcatccaattcgt 42000
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 133 gcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgccaacttc 192 |||||||| |||||||||||| || | || ||||| |||||||| ||| ||||||||||| Sbjct: 24441015 gcgctgccttacctgagccccgacctccgaggcgagaacctgcttgtctgcgccaacttc 24440956 Query: 193 gcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgt 239 || |||||||| ||| |||||||||||||||| ||| | |||||||| Sbjct: 24440955 gcctccgccggtgtcagcatcctcaacgacaccggcatccaattcgt 24440909 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 76 ttctccaacgggctcaacatccccgacatcatcagcgag 114 |||||||| || ||||||||||| ||||||| ||||||| Sbjct: 20702130 ttctccaatggcctcaacatcccggacatcaccagcgag 20702092
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 133 gcgctgccgtacctgagcccctacatgcgcggcgacaacctgctcgtcggcgccaacttc 192 |||||||| |||||||||||| || | || ||||| |||||||| ||| ||||||||||| Sbjct: 24752684 gcgctgccttacctgagccccgacctccgaggcgagaacctgcttgtctgcgccaacttc 24752625 Query: 193 gcgtccgccggcgtcggcatcctcaacgacacaggcgtgcaattcgt 239 || |||||||| ||| |||||||||||||||| ||| | |||||||| Sbjct: 24752624 gcctccgccggtgtcagcatcctcaacgacaccggcatccaattcgt 24752578 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 76 ttctccaacgggctcaacatccccgacatcatcagcgag 114 |||||||| || ||||||||||| ||||||| ||||||| Sbjct: 21012365 ttctccaatggcctcaacatcccggacatcaccagcgag 21012327
>gb|AY106104.1| Zea mays PCO141808 mRNA sequence Length = 590 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 321 ggcgaggcagcgcgtgagccagtcgctggtgctcatcaccctcggcggcaacgacttcgt 380 ||||| ||||| ||||| |||| | || ||||||||||| |||||||||||||||||||| Sbjct: 62 ggcgacgcagctcgtgaaccaggccctcgtgctcatcacgctcggcggcaacgacttcgt 121 Query: 381 caacaactactacctggtgccc 402 ||||||||||||||||||||| Sbjct: 122 gaacaactactacctggtgccc 143
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 169 aacctgctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggc 228 |||||||| ||| ||||||||||||| |||||||||||| |||||||||| ||||| ||| Sbjct: 27093457 aacctgcttgtctgcgccaacttcgcctccgccggcgtcagcatcctcaatgacaccggc 27093398 Query: 229 gtgcaattcgt 239 | |||||||| Sbjct: 27093397 atccaattcgt 27093387 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 aacgggctcaacatccccga 101 |||||||||||||||||||| Sbjct: 29304847 aacgggctcaacatccccga 29304866
>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0427D10 Length = 154192 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 169 aacctgctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggc 228 |||||||| ||| ||||||||||||| |||||||||||| |||||||||| ||||| ||| Sbjct: 96698 aacctgcttgtctgcgccaacttcgcctccgccggcgtcagcatcctcaatgacaccggc 96639 Query: 229 gtgcaattcgt 239 | |||||||| Sbjct: 96638 atccaattcgt 96628
>gb|AY491975.1| Agave americana GSDL-motif lipase (AEL) mRNA, AEL1 allele, complete cds Length = 1438 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 352 ctcatcaccctcggcggcaacgacttcgtcaacaactactacctggtgcccttctc 407 |||||||||||||| ||||| ||||| || |||||||||||| ||||||| ||||| Sbjct: 544 ctcatcaccctcggaggcaatgactttgttaacaactactacttggtgccattctc 599 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 85 gggctcaacatccccgacatcatcagcgagtacctcgg 122 |||||||||||||| ||||| ||||| ||| ||||||| Sbjct: 277 gggctcaacatccctgacattatcagtgagcacctcgg 314 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 211 atcctcaacgacacaggcgtgcaattcgtgaacatcatcaggat 254 |||||||||||||| ||| | |||||| | |||||||| ||||| Sbjct: 403 atcctcaacgacaccggcatccaattcatcaacatcattaggat 446
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 173 tgctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacga 221 |||||| ||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 8248181 tgctcggcggcgtcaacttcgcgtccggcggcgccggcctcctcaacga 8248229 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 180 cggcgccaacttcgcgtccgccggcgtcggcatcctcaacga 221 ||||| ||||||||| |||| ||||| ||||||||||||||| Sbjct: 6747231 cggcgtcaacttcgcctccggcggcggcggcatcctcaacga 6747272
>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624H09 Length = 158719 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 173 tgctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacga 221 |||||| ||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 140544 tgctcggcggcgtcaacttcgcgtccggcggcgccggcctcctcaacga 140592
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0603C10 Length = 187620 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 173 tgctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacga 221 |||||| ||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 41686 tgctcggcggcgtcaacttcgcgtccggcggcgccggcctcctcaacga 41734
>dbj|AK108686.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C04, full insert sequence Length = 1426 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 173 tgctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacga 221 |||||| ||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 375 tgctcggcggcgtcaacttcgcgtccggcggcgccggcctcctcaacga 423
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 180 cggcgccaacttcgcgtccgccggcgtcggcatcctcaacga 221 ||||| ||||||||| |||| ||||| ||||||||||||||| Sbjct: 76910 cggcgtcaacttcgcctccggcggcggcggcatcctcaacga 76951
>ref|NM_119022.2| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on ester bonds AT4G28780 mRNA, complete cds Length = 1582 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 352 ctcatcaccctcggcggcaacgacttcgtcaacaactact 391 ||||| || ||||||||||| || |||||||||||||||| Sbjct: 548 ctcatgactctcggcggcaatgatttcgtcaacaactact 587
>ref|XM_467638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1074 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 175 ctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgt 230 |||| ||||| |||||||||||||| ||||| |||||| || ||||| || ||||| Sbjct: 319 ctcggcggcgtcaacttcgcgtccggcggcgccggcattctgaacgagacgggcgt 374
>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69 Length = 197655 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 352 ctcatcaccctcggcggcaacgacttcgtcaacaactact 391 ||||| || ||||||||||| || |||||||||||||||| Sbjct: 137104 ctcatgactctcggcggcaatgatttcgtcaacaactact 137143
>emb|AL035353.1|ATF16A16 Arabidopsis thaliana DNA chromosome 4, BAC clone F16A16 (ESSAII project) Length = 97155 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Minus Query: 352 ctcatcaccctcggcggcaacgacttcgtcaacaactact 391 ||||| || ||||||||||| || |||||||||||||||| Sbjct: 39963 ctcatgactctcggcggcaatgatttcgtcaacaactact 39924
>emb|BX827615.1|CNS0A2RS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS84ZC10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1365 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 352 ctcatcaccctcggcggcaacgacttcgtcaacaactact 391 ||||| || ||||||||||| || |||||||||||||||| Sbjct: 515 ctcatgactctcggcggcaatgatttcgtcaacaactact 554
>gb|BT004465.1| Arabidopsis thaliana clone U20520 putative proline-rich APG protein (At4g28780) mRNA, complete cds Length = 1134 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 352 ctcatcaccctcggcggcaacgacttcgtcaacaactact 391 ||||| || ||||||||||| || |||||||||||||||| Sbjct: 490 ctcatgactctcggcggcaatgatttcgtcaacaactact 529
>gb|AY087166.1| Arabidopsis thaliana clone 324 mRNA, complete sequence Length = 1409 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 352 ctcatcaccctcggcggcaacgacttcgtcaacaactact 391 ||||| || ||||||||||| || |||||||||||||||| Sbjct: 548 ctcatgactctcggcggcaatgatttcgtcaacaactact 587
>gb|BT002993.1| Arabidopsis thaliana clone RAFL15-19-G19 (R20520) putative proline-rich APG protein (At4g28780) mRNA, complete cds Length = 1426 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 352 ctcatcaccctcggcggcaacgacttcgtcaacaactact 391 ||||| || ||||||||||| || |||||||||||||||| Sbjct: 548 ctcatgactctcggcggcaatgatttcgtcaacaactact 587
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 175 ctcgtcggcgccaacttcgcgtccgccggcgtcggcatcctcaacgacacaggcgt 230 |||| ||||| |||||||||||||| ||||| |||||| || ||||| || ||||| Sbjct: 86347 ctcggcggcgtcaacttcgcgtccggcggcgccggcattctgaacgagacgggcgt 86292
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 76 ttctccaacgggctcaacatccccgacatcatcagcgag 114 |||||||| || ||||||||||| ||||||| ||||||| Sbjct: 9191 ttctccaatggcctcaacatcccggacatcaccagcgag 9153
>ref|XM_659163.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6651.2), mRNA Length = 3330 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 tgctcatcaccctcggcggcaa 371 |||||||||||||||||||||| Sbjct: 1703 tgctcatcaccctcggcggcaa 1682
>ref|NM_122861.2| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on ester bonds AT5G33370 mRNA, complete cds Length = 1499 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 367 ggcaacgacttcgtcaacaactactacctggtgcccttctc 407 ||||| || |||||||||||||||||| |||| || ||||| Sbjct: 595 ggcaatgatttcgtcaacaactactacttggtccctttctc 635
>gb|AY659072.1| Synthetic construct Peudomonas aeruginosa clone FLH038040.01F PA2218 gene, partial cds Length = 1104 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 cggcggcaacgacttcgtcaa 383 ||||||||||||||||||||| Sbjct: 104 cggcggcaacgacttcgtcaa 124
>gb|AC131064.5| Homo sapiens chromosome 11, clone RP5-950E7, complete sequence Length = 106740 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 gtgagccagtcgctggtgctc 354 ||||||||||||||||||||| Sbjct: 103349 gtgagccagtcgctggtgctc 103329
>gb|AC116533.11| Homo sapiens chromosome 11, clone RP11-466H18, complete sequence Length = 189143 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 gtgagccagtcgctggtgctc 354 ||||||||||||||||||||| Sbjct: 153901 gtgagccagtcgctggtgctc 153921
>emb|CR387369.1| Gallus gallus finished cDNA, clone ChEST284m18 Length = 1425 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 cagcagctgcagaacttccag 279 ||||||||||||||||||||| Sbjct: 1270 cagcagctgcagaacttccag 1250
>gb|AF299336.1|AF299336 Stigmatella aurantiaca myxochelin iron transport regulon, complete sequence Length = 19653 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 ccgtacctgagcccctacatg 159 ||||||||||||||||||||| Sbjct: 17820 ccgtacctgagcccctacatg 17840
>emb|BX829761.1|CNS0A1CZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB34ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1328 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 367 ggcaacgacttcgtcaacaactactacctggtgcccttctc 407 ||||| || |||||||||||||||||| |||| || ||||| Sbjct: 569 ggcaatgatttcgtcaacaactactacttggtccctttctc 609
>emb|BX833945.1|CNS09YWT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZB01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 367 ggcaacgacttcgtcaacaactactacctggtgcccttctc 407 ||||| || |||||||||||||||||| |||| || ||||| Sbjct: 572 ggcaatgatttcgtcaacaactactacttggtccctttctc 612
>gb|BT004981.1| Arabidopsis thaliana clone U20686 unknown protein (At5g33370) mRNA, complete cds Length = 1132 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 367 ggcaacgacttcgtcaacaactactacctggtgcccttctc 407 ||||| || |||||||||||||||||| |||| || ||||| Sbjct: 502 ggcaatgatttcgtcaacaactactacttggtccctttctc 542
>gb|AE004648.1| Pseudomonas aeruginosa PAO1, section 209 of 529 of the complete genome Length = 11031 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 cggcggcaacgacttcgtcaa 383 ||||||||||||||||||||| Sbjct: 6526 cggcggcaacgacttcgtcaa 6506
>gb|BT004124.1| Arabidopsis thaliana clone RAFL15-13-I02 (R20686) unknown protein (At5g33370) mRNA, complete cds Length = 1382 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 367 ggcaacgacttcgtcaacaactactacctggtgcccttctc 407 ||||| || |||||||||||||||||| |||| || ||||| Sbjct: 583 ggcaatgatttcgtcaacaactactacttggtccctttctc 623
>gb|AY087366.1| Arabidopsis thaliana clone 34612 mRNA, complete sequence Length = 1393 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 367 ggcaacgacttcgtcaacaactactacctggtgcccttctc 407 ||||| || |||||||||||||||||| |||| || ||||| Sbjct: 596 ggcaatgatttcgtcaacaactactacttggtccctttctc 636
>gb|AC051625.6|AC051625 Genomic Sequence For Arabidopsis thaliana Clone F19N02 From Chromosome V, complete sequence Length = 116461 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 367 ggcaacgacttcgtcaacaactactacctggtgcccttctc 407 ||||| || |||||||||||||||||| |||| || ||||| Sbjct: 58618 ggcaatgatttcgtcaacaactactacttggtccctttctc 58658
>dbj|AB046439.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F26J23 Length = 94609 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 367 ggcaacgacttcgtcaacaactactacctggtgcccttctc 407 ||||| || |||||||||||||||||| |||| || ||||| Sbjct: 57689 ggcaatgatttcgtcaacaactactacttggtccctttctc 57649
>emb|Z14064.1|PAOPDEG Pseudomonas aeruginosa opdE gene Length = 3929 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 cggcggcaacgacttcgtcaa 383 ||||||||||||||||||||| Sbjct: 2368 cggcggcaacgacttcgtcaa 2388
>gb|AC005320.1|AC005320 Human Chromosome 11p14.3 PAC clone pDJ950e7, complete sequence Length = 106729 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 gtgagccagtcgctggtgctc 354 ||||||||||||||||||||| Sbjct: 103342 gtgagccagtcgctggtgctc 103322
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ttcgtgaacatcatcaggatc 255 ||||||||||||||||||||| Sbjct: 1421756 ttcgtgaacatcatcaggatc 1421736
>gb|AC160930.2| Mus musculus BAC clone RP24-383F22 from chromosome 14, complete sequence Length = 230236 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agctgcagaacttccaggac 282 |||||||||||||||||||| Sbjct: 195013 agctgcagaacttccaggac 195032
>gb|AC151106.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNOa0281D22, complete sequence Length = 35282 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cgacggcgcgcgcggacgcg 30 |||||||||||||||||||| Sbjct: 9778 cgacggcgcgcgcggacgcg 9759
>ref|XM_952082.1| Neurospora crassa OR74A hypothetical protein (NCU01752.1) partial mRNA Length = 1854 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 catcaccctcggcggcaacg 373 |||||||||||||||||||| Sbjct: 918 catcaccctcggcggcaacg 937
>ref|XM_328190.1| Neurospora crassa OR74A hypothetical protein (NCU01752.1) partial mRNA Length = 1854 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 catcaccctcggcggcaacg 373 |||||||||||||||||||| Sbjct: 918 catcaccctcggcggcaacg 937
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cggcgcgcgcggacgcgccg 33 |||||||||||||||||||| Sbjct: 3938867 cggcgcgcgcggacgcgccg 3938848
>emb|AL355926.1|NCB17C10 Neurospora crassa DNA linkage group II BAC clone B17C10 Length = 68484 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 catcaccctcggcggcaacg 373 |||||||||||||||||||| Sbjct: 59259 catcaccctcggcggcaacg 59278
>gb|AE011844.1| Xanthomonas axonopodis pv. citri str. 306, section 222 of 469 of the complete genome Length = 13651 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 aacttcgcgtccgccggcgt 206 |||||||||||||||||||| Sbjct: 12788 aacttcgcgtccgccggcgt 12807
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 tcgcgcagcagctgcagaacttccagga 281 |||||||||||||||| |||||| |||| Sbjct: 362583 tcgcgcagcagctgcaaaacttcgagga 362610
>gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, complete sequence Length = 145242 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tcgacttccccacgcacatg 63 |||||||||||||||||||| Sbjct: 65219 tcgacttccccacgcacatg 65238
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cttcgcgtccgccggcgtcg 208 |||||||||||||||||||| Sbjct: 4338662 cttcgcgtccgccggcgtcg 4338643
>gb|AC154738.2| Mus musculus BAC clone RP24-390D14 from chromosome 14, complete sequence Length = 197100 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agctgcagaacttccaggac 282 |||||||||||||||||||| Sbjct: 31877 agctgcagaacttccaggac 31896
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 aacgggctcaacatccccga 101 |||||||||||||||||||| Sbjct: 93536 aacgggctcaacatccccga 93555
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gcccacggggaggttctcca 82 |||||||||||||||||||| Sbjct: 1046658 gcccacggggaggttctcca 1046639
>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0434E03 Length = 142414 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cgacggcgcgcgcggacgcg 30 |||||||||||||||||||| Sbjct: 22382 cgacggcgcgcgcggacgcg 22401
>ref|NM_210074.1| Eremothecium gossypii AEL141Wp (AEL141W), mRNA Length = 1299 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 tcgcgcagcagctgcagaacttccagga 281 |||||||||||||||| |||||| |||| Sbjct: 104 tcgcgcagcagctgcaaaacttcgagga 131
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gcccacggggaggttctcca 82 |||||||||||||||||||| Sbjct: 719635 gcccacggggaggttctcca 719616 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,643,827 Number of Sequences: 3902068 Number of extensions: 2643827 Number of successful extensions: 61540 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60506 Number of HSP's gapped (non-prelim): 995 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
