ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast42a03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, complete sequence Length = 152272 Score = 46.1 bits (23), Expect = 0.030 Identities = 26/27 (96%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagaggcggcgg 89 |||||||||||||||||| |||||||| Sbjct: 38776 caccatgcggccaccgaggggcggcgg 38802 Score = 38.2 bits (19), Expect = 7.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 99 cggccgcggtggcgaccgaggtggacgcttcggtggaggcggc 141 |||| ||||||||| | | ||||| ||||||||||| |||||| Sbjct: 38839 cggcggcggtggcggcaggggtggccgcttcggtggcggcggc 38881
>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, sequencing in progress, complete sequence Length = 152272 Score = 46.1 bits (23), Expect = 0.030 Identities = 26/27 (96%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagaggcggcgg 89 |||||||||||||||||| |||||||| Sbjct: 38776 caccatgcggccaccgaggggcggcgg 38802 Score = 38.2 bits (19), Expect = 7.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 99 cggccgcggtggcgaccgaggtggacgcttcggtggaggcggc 141 |||| ||||||||| | | ||||| ||||||||||| |||||| Sbjct: 38839 cggcggcggtggcggcaggggtggccgcttcggtggcggcggc 38881
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.030 Identities = 26/27 (96%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagaggcggcgg 89 |||||||||||||||||| |||||||| Sbjct: 21036461 caccatgcggccaccgaggggcggcgg 21036487 Score = 38.2 bits (19), Expect = 7.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 99 cggccgcggtggcgaccgaggtggacgcttcggtggaggcggc 141 |||| ||||||||| | | ||||| ||||||||||| |||||| Sbjct: 21036524 cggcggcggtggcggcaggggtggccgcttcggtggcggcggc 21036566
>dbj|AK121986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108P09, full insert sequence Length = 928 Score = 46.1 bits (23), Expect = 0.030 Identities = 26/27 (96%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagaggcggcgg 89 |||||||||||||||||| |||||||| Sbjct: 78 caccatgcggccaccgaggggcggcgg 104 Score = 38.2 bits (19), Expect = 7.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 99 cggccgcggtggcgaccgaggtggacgcttcggtggaggcggc 141 |||| ||||||||| | | ||||| ||||||||||| |||||| Sbjct: 141 cggcggcggtggcggcaggggtggccgcttcggtggcggcggc 183
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.030 Identities = 26/27 (96%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagaggcggcgg 89 |||||||||||||||||| |||||||| Sbjct: 21346702 caccatgcggccaccgaggggcggcgg 21346728 Score = 38.2 bits (19), Expect = 7.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 99 cggccgcggtggcgaccgaggtggacgcttcggtggaggcggc 141 |||| ||||||||| | | ||||| ||||||||||| |||||| Sbjct: 21346765 cggcggcggtggcggcaggggtggccgcttcggtggcggcggc 21346807
>ref|XM_859578.1| PREDICTED: Canis familiaris similar to CG11412-PA, isoform A, transcript variant 2 (LOC612880), mRNA Length = 2928 Score = 44.1 bits (22), Expect = 0.12 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 cggtggaggcggccgcggcggc 150 |||||||||||||||||||||| Sbjct: 61 cggtggaggcggccgcggcggc 82
>ref|XM_480201.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1104 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccgc 153 ||||||||||||||||||||| Sbjct: 690 ggaggcggccgcggcggccgc 670
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ggaggcggccgcggcggccgc 153 ||||||||||||||||||||| Sbjct: 612195 ggaggcggccgcggcggccgc 612215
>ref|XM_602541.2| PREDICTED: Bos taurus similar to RNA binding motif protein 24 (LOC524220), mRNA Length = 2875 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 cggtggaggcggccgcggcgg 149 ||||||||||||||||||||| Sbjct: 813 cggtggaggcggccgcggcgg 793
>ref|XM_953968.1| Neurospora crassa OR74A hypothetical protein (NCU07548.1) partial mRNA Length = 1248 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ggcggcggaggtttccgcggc 102 ||||||||||||||||||||| Sbjct: 1030 ggcggcggaggtttccgcggc 1050
>ref|XM_327833.1| Neurospora crassa OR74A hypothetical protein (NCU07548.1) partial mRNA Length = 1248 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ggcggcggaggtttccgcggc 102 ||||||||||||||||||||| Sbjct: 1030 ggcggcggaggtttccgcggc 1050
>gb|AC022046.11| Homo sapiens chromosome , clone RP11-13L22, complete sequence Length = 169553 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccgc 153 ||||||||||||||||||||| Sbjct: 125333 ggaggcggccgcggcggccgc 125313
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 ggtggaggcggccgcggcggc 150 ||||||||||||||||||||| Sbjct: 3605794 ggtggaggcggccgcggcggc 3605774 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 cgcggccgcggtggcgacc 115 ||||||||||||||||||| Sbjct: 4243132 cgcggccgcggtggcgacc 4243114 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 ccgcggccgcggtggcgac 114 ||||||||||||||||||| Sbjct: 290091 ccgcggccgcggtggcgac 290073
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 ggtggaggcggccgcggcggc 150 ||||||||||||||||||||| Sbjct: 4382605 ggtggaggcggccgcggcggc 4382625 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ggaggcggccgcggcggccgc 153 ||||||||||||||||||||| Sbjct: 3504974 ggaggcggccgcggcggccgc 3504994 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccg 152 |||||||||||||||||||| Sbjct: 1743728 ggaggcggccgcggcggccg 1743709 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcgg 149 ||||||||||||||||||| Sbjct: 1068458 gtggaggcggccgcggcgg 1068440 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcggccgc 153 ||||||||||| ||||||||||| Sbjct: 792147 gtggaggcggctgcggcggccgc 792125
>gb|DQ119598.1| Ameiva auberi HOXA13 (HOXA13) gene, partial cds Length = 447 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 cggtggaggcggccgcggcggccgc 153 |||||| |||||||||||||||||| Sbjct: 47 cggtggcggcggccgcggcggccgc 71
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 ggtggaggcggccgcggcggc 150 ||||||||||||||||||||| Sbjct: 145399 ggtggaggcggccgcggcggc 145419
>dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_B10 Length = 115074 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 ggtggaggcggccgcggcggc 150 ||||||||||||||||||||| Sbjct: 29781 ggtggaggcggccgcggcggc 29801
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ggaggcggccgcggcggccgc 153 ||||||||||||||||||||| Sbjct: 138393 ggaggcggccgcggcggccgc 138413
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ggaggcggccgcggcggccgc 153 ||||||||||||||||||||| Sbjct: 60691 ggaggcggccgcggcggccgc 60711
>gb|AY108045.1| Zea mays PCO088666 mRNA sequence Length = 871 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagagg 83 ||||||||||||||||||||| Sbjct: 132 caccatgcggccaccgagagg 152
>ref|XM_510006.1| PREDICTED: Pan troglodytes similar to muscle beta spectrin (LOC452970), mRNA Length = 7365 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagag 82 |||||||||||||||||||| Sbjct: 6697 caccatgcggccaccgagag 6716
>ref|XM_507567.1| PREDICTED Oryza sativa (japonica cultivar-group), P0582D05.138 mRNA Length = 2586 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccg 152 |||||||||||||||||||| Sbjct: 212 ggaggcggccgcggcggccg 193
>ref|XM_479934.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2214 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccg 152 |||||||||||||||||||| Sbjct: 224 ggaggcggccgcggcggccg 205
>ref|XM_507118.2| PREDICTED Oryza sativa (japonica cultivar-group), P0582D05.138 mRNA Length = 2620 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccg 152 |||||||||||||||||||| Sbjct: 224 ggaggcggccgcggcggccg 205
>ref|XM_472579.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 867 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcggc 150 |||||||||||||||||||| Sbjct: 138 gtggaggcggccgcggcggc 119
>gb|AY499432.1| Uncultured delta proteobacterium clone RAI-124 16S ribosomal RNA gene, partial sequence Length = 571 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gccgaaacccttcctcactc 42 |||||||||||||||||||| Sbjct: 401 gccgaaacccttcctcactc 382
>ref|XM_956905.1| Neurospora crassa OR74A hypothetical protein (NCU08811.1) partial mRNA Length = 1491 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cactcccgcccccgccgcca 57 |||||||||||||||||||| Sbjct: 636 cactcccgcccccgccgcca 655
>ref|XM_330927.1| Neurospora crassa OR74A hypothetical protein (NCU08811.1) partial mRNA Length = 1491 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cactcccgcccccgccgcca 57 |||||||||||||||||||| Sbjct: 636 cactcccgcccccgccgcca 655
>ref|NM_001024858.1| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis, clinical type I) (SPTB), transcript variant 1, mRNA Length = 10064 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagag 82 |||||||||||||||||||| Sbjct: 6370 caccatgcggccaccgagag 6389
>ref|NM_000347.4| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis, clinical type I) (SPTB), transcript variant 2, mRNA Length = 6695 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagag 82 |||||||||||||||||||| Sbjct: 6370 caccatgcggccaccgagag 6389
>emb|AM117164.1| Lactobacillus paracasei partial 16S rRNA gene, clone 3F3 Length = 457 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gccgaaacccttcctcactc 42 |||||||||||||||||||| Sbjct: 301 gccgaaacccttcctcactc 282
>gb|AY225606.1| Uncultured delta proteobacterium clone AT-s3-57 16S ribosomal RNA gene, partial sequence Length = 1439 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gccgaaacccttcctcactc 42 |||||||||||||||||||| Sbjct: 371 gccgaaacccttcctcactc 352
>emb|X59511.1|HSBSPEC3 H.sapiens mRNA for beta-spectrin (3' partial) Length = 954 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagag 82 |||||||||||||||||||| Sbjct: 592 caccatgcggccaccgagag 611
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggaggcggccgcggcggccg 152 |||||||||||||||||||| Sbjct: 97335 ggaggcggccgcggcggccg 97354
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gaggcggccgcggcggccgc 153 |||||||||||||||||||| Sbjct: 1699923 gaggcggccgcggcggccgc 1699904
>dbj|AB238995.1| Uncultured delta proteobacterium gene for 16S rRNA, partial sequence, clone: BJS81-003 Length = 949 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gccgaaacccttcctcactc 42 |||||||||||||||||||| Sbjct: 428 gccgaaacccttcctcactc 409
>gb|AF465439.1| Homo sapiens beta I spectrin form betaI sigma3 mRNA, partial cds; alternatively spliced Length = 3456 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagag 82 |||||||||||||||||||| Sbjct: 2311 caccatgcggccaccgagag 2330
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcggc 150 |||||||||||||||||||| Sbjct: 21701239 gtggaggcggccgcggcggc 21701220 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 ccttcctcactcccgcccccgcc 53 |||||||| |||||||||||||| Sbjct: 22219541 ccttcctccctcccgcccccgcc 22219563
>dbj|AB080104.1| Uncultured marine bacterium gene for 16S rRNA, partial sequence, clone:BSS4 Length = 196 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gccgaaacccttcctcactc 42 |||||||||||||||||||| Sbjct: 85 gccgaaacccttcctcactc 66
>gb|DQ206956.1| Uncultured bacterium clone fh04 16S ribosomal RNA gene, partial sequence Length = 700 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gccgaaacccttcctcactc 42 |||||||||||||||||||| Sbjct: 426 gccgaaacccttcctcactc 407
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 ggtggaggcggccgcggcggccgc 153 ||||||| |||||||||||||||| Sbjct: 3154456 ggtggagtcggccgcggcggccgc 3154479 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 2721585 tggaggcggccgcggcggc 2721567
>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0009H02 Length = 155388 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccg 152 |||||||||||||||||||| Sbjct: 26089 ggaggcggccgcggcggccg 26070
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccg 152 |||||||||||||||||||| Sbjct: 143228 ggaggcggccgcggcggccg 143209
>dbj|AK101091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024M15, full insert sequence Length = 2214 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccg 152 |||||||||||||||||||| Sbjct: 224 ggaggcggccgcggcggccg 205
>dbj|AK100132.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010C03, full insert sequence Length = 2586 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccg 152 |||||||||||||||||||| Sbjct: 212 ggaggcggccgcggcggccg 193
>emb|AM229429.1| Uncultured Streptococcus sp. partial 16S rRNA gene, clone VP40 Length = 167 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gccgaaacccttcctcactc 42 |||||||||||||||||||| Sbjct: 77 gccgaaacccttcctcactc 58
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccg 152 |||||||||||||||||||| Sbjct: 2065933 ggaggcggccgcggcggccg 2065914
>dbj|AK067165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096N08, full insert sequence Length = 2618 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggccg 152 |||||||||||||||||||| Sbjct: 224 ggaggcggccgcggcggccg 205
>emb|AL121774.5|CNS01DSF Human chromosome 14 DNA sequence BAC R-430G13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171030 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagag 82 |||||||||||||||||||| Sbjct: 67211 caccatgcggccaccgagag 67230
>gb|U73128.1|SSU73128 Sphingomonas sp. A8AN3 catechol 2,3-dioxygenase gene, complete cds and 2-hydroxymuconic semialdehyde hydrolase and 2-hydroxymuconic semialdehyde dehydrogenase genes, partial cds Length = 2331 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 ccgccgccaaacatcaccatgcgg 72 |||||||| ||||||||||||||| Sbjct: 1950 ccgccgccgaacatcaccatgcgg 1927
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcggc 150 |||||||||||||||||||| Sbjct: 12856 gtggaggcggccgcggcggc 12837
>dbj|AB209415.1| Homo sapiens mRNA for spectrin, beta, erythrocytic (includes spherocytosis, clinical type I) variant protein Length = 7481 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagag 82 |||||||||||||||||||| Sbjct: 6459 caccatgcggccaccgagag 6478
>gb|M37884.1|HUMSPC1 Human muscle beta spectrin mRNA, 3' end Length = 4190 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagag 82 |||||||||||||||||||| Sbjct: 3154 caccatgcggccaccgagag 3173
>gb|J05500.1|HUMSPTB Human beta-spectrin (SPTB) mRNA, complete cds Length = 6765 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagag 82 |||||||||||||||||||| Sbjct: 6411 caccatgcggccaccgagag 6430
>gb|M37885.1|HUMSPC2 Human brain beta spectrin mRNA, partial cds Length = 145 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagag 82 |||||||||||||||||||| Sbjct: 35 caccatgcggccaccgagag 54
>gb|U00909.1|HSU00909 Human beta-spectrin (HSPTB1) gene, Humbspec.32 exon sequence Length = 570 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caccatgcggccaccgagag 82 |||||||||||||||||||| Sbjct: 208 caccatgcggccaccgagag 227
>ref|NM_188346.1| Oryza sativa (japonica cultivar-group), Ozsa8097 predicted mRNA Length = 1434 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 1151 tggaggcggccgcggcggc 1169
>ref|XM_479814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1776 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcgg 149 ||||||||||||||||||| Sbjct: 1625 gtggaggcggccgcggcgg 1607
>ref|XM_479773.1| Oryza sativa (japonica cultivar-group), mRNA Length = 732 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 131 gtggaggcggccgcggcggccgc 153 ||||||||||| ||||||||||| Sbjct: 420 gtggaggcggctgcggcggccgc 442
>ref|XM_464466.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2270 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 234 tggaggcggccgcggcggc 252
>ref|NM_191922.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1173 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 ctcccgcccccgccgccaa 58 ||||||||||||||||||| Sbjct: 12 ctcccgcccccgccgccaa 30
>ref|XM_477990.1| Oryza sativa (japonica cultivar-group), mRNA Length = 993 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 130 ggtggaggcggccgcggcg 148 ||||||||||||||||||| Sbjct: 300 ggtggaggcggccgcggcg 318
>ref|XM_477548.1| Oryza sativa (japonica cultivar-group), mRNA Length = 555 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcggccgc 153 ||||||||||| ||||||||||| Sbjct: 312 gtggaggcggcggcggcggccgc 290
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 131 gtggaggcggccgcggcgg 149 ||||||||||||||||||| Sbjct: 165257 gtggaggcggccgcggcgg 165275
>gb|BT016623.1| Zea mays clone Contig456 mRNA sequence Length = 1039 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 cggtggaggcggccgcggc 147 ||||||||||||||||||| Sbjct: 517 cggtggaggcggccgcggc 535
>gb|AY551433.1| Hordeum vulgare subsp. vulgare GA 2-oxidase 5 (GA2ox5) mRNA, complete cds Length = 1394 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 131 gtggaggcggccgcggcgg 149 ||||||||||||||||||| Sbjct: 268 gtggaggcggccgcggcgg 286
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 128 tcggtggaggcggccgcggcggc 150 ||||||| ||||||||||||||| Sbjct: 537679 tcggtggcggcggccgcggcggc 537657
>gb|AC104283.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1607_F09, complete sequence Length = 95755 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 128 tcggtggaggcggccgcggcggc 150 |||||||||||||| |||||||| Sbjct: 65702 tcggtggaggcggcggcggcggc 65680
>gb|AY677128.1| Trametes versicolor strain KN9522 manganese peroxidase isozyme precursor (cmp1) mRNA, complete cds Length = 1361 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 cgcggccgcggtggcgacc 115 ||||||||||||||||||| Sbjct: 122 cgcggccgcggtggcgacc 104
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 135 aggcggccgcggcggccgc 153 ||||||||||||||||||| Sbjct: 4087944 aggcggccgcggcggccgc 4087926
>ref|XM_363848.1| Magnaporthe grisea 70-15 hypothetical protein (MG01774.4) partial mRNA Length = 2415 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 127 ttcggtggaggcggccgcggcggccgc 153 |||||||| ||||||||||| |||||| Sbjct: 1384 ttcggtggtggcggccgcggtggccgc 1410
>gb|AY427787.1| Bos taurus paternally expressed gene 3 (Peg3) mRNA, complete cds Length = 11076 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcggccgc 153 |||| |||||||||||||||||| Sbjct: 6926 gtggcggcggccgcggcggccgc 6904
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 135 aggcggccgcggcggccgc 153 ||||||||||||||||||| Sbjct: 77580 aggcggccgcggcggccgc 77562
>ref|XM_001006286.1| PREDICTED: Mus musculus similar to paternally expressed 3 (LOC677625), mRNA Length = 1116 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcggccgc 153 |||| |||||||||||||||||| Sbjct: 500 gtggcggcggccgcggcggccgc 478
>ref|XM_842588.1| Leishmania major strain Friedlin protein transport protein Sec24A (LMJ_0658) partial mRNA Length = 2901 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 135 aggcggccgcggcggccgc 153 ||||||||||||||||||| Sbjct: 47 aggcggccgcggcggccgc 65
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 cggtggaggcggccgcggc 147 ||||||||||||||||||| Sbjct: 130920 cggtggaggcggccgcggc 130938 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 129 cggtggaggcggccgcggc 147 ||||||||||||||||||| Sbjct: 107298 cggtggaggcggccgcggc 107280
>ref|XM_750594.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g13540) partial mRNA Length = 2292 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 100 ggccgcggtggcgaccgaggtgg 122 |||||||||||||| |||||||| Sbjct: 1012 ggccgcggtggcgatcgaggtgg 1034
>emb|AL161716.14| Human DNA sequence from clone RP11-266E6 on chromosome 13 Contains the 3' end of a novel gene, a guanidinoacetate N-methyltransferase (GAMT) pseudogene and a CpG island, complete sequence Length = 164345 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 42 cccgcccccgccgccaaacatca 64 |||||||||||| |||||||||| Sbjct: 57416 cccgcccccgccaccaaacatca 57394
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 135 aggcggccgcggcggccgc 153 ||||||||||||||||||| Sbjct: 278509 aggcggccgcggcggccgc 278491
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 gaggcggccgcggcggccg 152 ||||||||||||||||||| Sbjct: 303694 gaggcggccgcggcggccg 303712 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 gaggcggccgcggcggccg 152 ||||||||||||||||||| Sbjct: 301171 gaggcggccgcggcggccg 301189 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 gaggcggccgcggcggccg 152 ||||||||||||||||||| Sbjct: 299212 gaggcggccgcggcggccg 299230 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 gaggcggccgcggcggccg 152 ||||||||||||||||||| Sbjct: 275925 gaggcggccgcggcggccg 275943
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 gaggcggccgcggcggccg 152 ||||||||||||||||||| Sbjct: 211538 gaggcggccgcggcggccg 211556 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 gaggcggccgcggcggccg 152 ||||||||||||||||||| Sbjct: 188267 gaggcggccgcggcggccg 188285
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 gaggcggccgcggcggccg 152 ||||||||||||||||||| Sbjct: 76984 gaggcggccgcggcggccg 77002
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 gaggcggccgcggcggccg 152 ||||||||||||||||||| Sbjct: 29997 gaggcggccgcggcggccg 30015
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 gcggccgcggtggcgaccg 116 ||||||||||||||||||| Sbjct: 132149 gcggccgcggtggcgaccg 132131
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 135 aggcggccgcggcggccgc 153 ||||||||||||||||||| Sbjct: 282031 aggcggccgcggcggccgc 282013
>gb|AE012021.1| Xanthomonas axonopodis pv. citri str. 306, section 399 of 469 of the complete genome Length = 10869 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgcccccgccgccaaaca 61 ||||||||||||||||||| Sbjct: 7387 ccgcccccgccgccaaaca 7369
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 gcggccgcggtggcgaccg 116 ||||||||||||||||||| Sbjct: 540469 gcggccgcggtggcgaccg 540487
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 130 ggtggaggcggccgcggcggccg 152 ||||||||| ||||||||||||| Sbjct: 572165 ggtggaggccgccgcggcggccg 572187
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 130 ggtggaggcggccgcggcggccg 152 |||||||||||| |||||||||| Sbjct: 20684816 ggtggaggcggcggcggcggccg 20684838
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 130 ggtggaggcggccgcggcg 148 ||||||||||||||||||| Sbjct: 16208297 ggtggaggcggccgcggcg 16208315 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcggccgc 153 ||||||||||| ||||||||||| Sbjct: 11386446 gtggaggcggcggcggcggccgc 11386424 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 130 ggtggaggcggccgcggcggccg 152 |||||||||||| |||||||||| Sbjct: 5570050 ggtggaggcggcggcggcggccg 5570028
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 128 tcggtggaggcggccgcggcggc 150 |||||||||||||| |||||||| Sbjct: 2498680 tcggtggaggcggcggcggcggc 2498658
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 7 cccctcactcctcgccgccgaaaccct 33 ||||||||||| |||||||||||||| Sbjct: 26868500 cccctcactcccagccgccgaaaccct 26868526 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 5379696 tggaggcggccgcggcggc 5379678
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 40327045 tggaggcggccgcggcggc 40327027 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 ctcccgcccccgccgccaa 58 ||||||||||||||||||| Sbjct: 27263622 ctcccgcccccgccgccaa 27263604 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 5799859 tggaggcggccgcggcggc 5799877
>dbj|AB197125.1| Burkholderia multivorans genes for GrpE, putative thioredoxin, DnaK, DnaJ, para-aminobenzoate synthetase component, complete and partial cds Length = 5596 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 129 cggtggaggcggccgcggcggcc 151 |||| |||||||||||||||||| Sbjct: 3876 cggtcgaggcggccgcggcggcc 3898
>dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1455F06 Length = 140848 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 36009 tggaggcggccgcggcggc 35991
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 99 cggccgcggtggcgaccgaggtg 121 ||||||||||||| ||||||||| Sbjct: 6269702 cggccgcggtggccaccgaggtg 6269680 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 gcggccgcggtggcgaccg 116 ||||||||||||||||||| Sbjct: 3063106 gcggccgcggtggcgaccg 3063088
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 ctcccgcccccgccgccaa 58 ||||||||||||||||||| Sbjct: 44139 ctcccgcccccgccgccaa 44121
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 3600 tggaggcggccgcggcggc 3618
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 124561 tggaggcggccgcggcggc 124579
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 130 ggtggaggcggccgcggcggccg 152 |||||||||||| |||||||||| Sbjct: 78427 ggtggaggcggcggcggcggccg 78449
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 33277 tggaggcggccgcggcggc 33259
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 cccgcccccgccgccaaac 60 ||||||||||||||||||| Sbjct: 2720544 cccgcccccgccgccaaac 2720526 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 ggcggaggtttccgcggcc 103 ||||||||||||||||||| Sbjct: 2297407 ggcggaggtttccgcggcc 2297389
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 125 gcttcggtggaggcggccgcggc 147 ||||||||| ||||||||||||| Sbjct: 4534494 gcttcggtgaaggcggccgcggc 4534516
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 7 cccctcactcctcgccgccgaaaccct 33 ||||||||||| |||||||||||||| Sbjct: 47043 cccctcactcccagccgccgaaaccct 47069
>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0081K20 Length = 117287 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 130 ggtggaggcggccgcggcggccg 152 |||||||||||| |||||||||| Sbjct: 83135 ggtggaggcggcggcggcggccg 83113
>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0656C04 Length = 143411 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcggccgc 153 ||||||||||| ||||||||||| Sbjct: 86957 gtggaggcggcggcggcggccgc 86935
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 7 cccctcactcctcgccgccgaaaccct 33 ||||||||||| |||||||||||||| Sbjct: 134553 cccctcactcccagccgccgaaaccct 134579
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 105999 tggaggcggccgcggcggc 105981
>ref|NM_001002887.1| Bos taurus paternally expressed gene 3 (PEG3), mRNA Length = 11076 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcggccgc 153 |||| |||||||||||||||||| Sbjct: 6926 gtggcggcggccgcggcggccgc 6904
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcggccgc 153 ||||||||||| ||||||||||| Sbjct: 91367 gtggaggcggctgcggcggccgc 91345
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 131 gtggaggcggccgcggcgg 149 ||||||||||||||||||| Sbjct: 96985 gtggaggcggccgcggcgg 96967
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_H04 Length = 151699 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 130 ggtggaggcggccgcggcg 148 ||||||||||||||||||| Sbjct: 28735 ggtggaggcggccgcggcg 28753
>dbj|AK100026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146I06, full insert sequence Length = 1567 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 130 ggtggaggcggccgcggcggccg 152 |||||||||||| |||||||||| Sbjct: 172 ggtggaggcggcggcggcggccg 150
>dbj|AK068173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133N02, full insert sequence Length = 3738 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 128 tcggtggaggcggccgcggcggc 150 |||||||||||||| |||||||| Sbjct: 95 tcggtggaggcggcggcggcggc 117
>dbj|AK066028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047H11, full insert sequence Length = 2270 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 234 tggaggcggccgcggcggc 252
>dbj|AK062581.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-B10, full insert sequence Length = 1357 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 tggaggcggccgcggcggc 150 ||||||||||||||||||| Sbjct: 418 tggaggcggccgcggcggc 400
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 130 ggtggaggcggccgcggcggccg 152 |||||||||||| |||||||||| Sbjct: 31742 ggtggaggcggcggcggcggccg 31720
>gb|AY104445.1| Zea mays PCO063886 mRNA sequence Length = 540 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 cggtggaggcggccgcggc 147 ||||||||||||||||||| Sbjct: 30 cggtggaggcggccgcggc 48
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 118 ggtggacgcttcggtggaggcgg 140 ||||| ||||||||||||||||| Sbjct: 608531 ggtggtcgcttcggtggaggcgg 608509
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 ccttcctcactcccgcccccgcc 53 |||||||| |||||||||||||| Sbjct: 89402 ccttcctccctcccgcccccgcc 89424
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 123 acgcttcggtggaggcggc 141 ||||||||||||||||||| Sbjct: 468411 acgcttcggtggaggcggc 468429
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 133 ggaggcggccgcggcggcc 151 ||||||||||||||||||| Sbjct: 2555155 ggaggcggccgcggcggcc 2555137
>gb|L14320.1|HSBBICP4A Bovine herpesvirus type 1 early-intermediate transcription control protein (BICP4) gene, complete cds Length = 8113 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 cggtggaggcggccgcggc 147 ||||||||||||||||||| Sbjct: 3733 cggtggaggcggccgcggc 3751 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,185,063 Number of Sequences: 3902068 Number of extensions: 1185063 Number of successful extensions: 121854 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114752 Number of HSP's gapped (non-prelim): 7102 length of query: 153 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 132 effective length of database: 17,151,101,840 effective search space: 2263945442880 effective search space used: 2263945442880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
