| Clone Name | bast41h11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SL9A1_RABIT (P23791) Sodium/hydrogen exchanger 1 (Na(+)/H(+) exc... | 28 | 9.2 | 2 | TIF1A_MOUSE (Q64127) Transcription intermediary factor 1-alpha (... | 28 | 9.2 |
|---|
>SL9A1_RABIT (P23791) Sodium/hydrogen exchanger 1 (Na(+)/H(+) exchanger 1)| (NHE-1) (Solute carrier family 9 member 1) Length = 816 Score = 27.7 bits (60), Expect = 9.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +2 Query: 23 RSHTVISSPTDQTTPERNRAEER 91 RSH + SPTD TTP+ + ER Sbjct: 33 RSHGLQLSPTDSTTPDSQPSRER 55
>TIF1A_MOUSE (Q64127) Transcription intermediary factor 1-alpha (TIF1-alpha)| (Tripartite motif protein 24) Length = 1051 Score = 27.7 bits (60), Expect = 9.2 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = +3 Query: 45 HPQTRPPRNATEQRSGKDAAEPGIGG 122 H Q RPP N T Q PG+ G Sbjct: 648 HAQPRPPSNRTVQSPNSSVPSPGLAG 673 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,802,551 Number of Sequences: 219361 Number of extensions: 280629 Number of successful extensions: 1165 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1165 length of database: 80,573,946 effective HSP length: 19 effective length of database: 76,406,087 effective search space used: 1833746088 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)