| Clone Name | bast41h11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY398368.1| Danio rerio clone RK066A1B03 KIAA0103-like protein mRNA, complete cds Length = 1435 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cacccacagaccagaccaccc 65 ||||||||||||||||||||| Sbjct: 1008 cacccacagaccagaccaccc 1028
>gb|AC093440.2| Drosophila melanogaster clone BACR34H03, complete sequence Length = 192132 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 cggcaaggatgctgctgaacccggc 113 ||||||||||||||||||| ||||| Sbjct: 121190 cggcaaggatgctgctgaaaccggc 121214
>gb|BC060910.1| Danio rerio cDNA clone IMAGE:4144140, **** WARNING: chimeric clone **** Length = 2260 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cacccacagaccagaccaccc 65 ||||||||||||||||||||| Sbjct: 991 cacccacagaccagaccaccc 1011
>ref|NM_213544.1| Danio rerio zgc:86891 (zgc:86891), mRNA Length = 1435 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cacccacagaccagaccaccc 65 ||||||||||||||||||||| Sbjct: 1008 cacccacagaccagaccaccc 1028
>gb|BC071517.1| Danio rerio zgc:86891, mRNA (cDNA clone MGC:86891 IMAGE:6904662), complete cds Length = 1443 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cacccacagaccagaccaccc 65 ||||||||||||||||||||| Sbjct: 1007 cacccacagaccagaccaccc 1027
>gb|AE003667.3| Drosophila melanogaster chromosome 2L, section 76 of 83 of the complete sequence Length = 257666 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 cggcaaggatgctgctgaacccggc 113 ||||||||||||||||||| ||||| Sbjct: 84182 cggcaaggatgctgctgaaaccggc 84206
>gb|AC002474.1|AC002474 Drosophila melanogaster DNA sequence (P1 DS05709 (D73)), complete sequence Length = 44834 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 cggcaaggatgctgctgaacccggc 113 ||||||||||||||||||| ||||| Sbjct: 23747 cggcaaggatgctgctgaaaccggc 23723
>emb|BX908791.12| Zebrafish DNA sequence from clone DKEY-261H15 in linkage group 18, complete sequence Length = 66694 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 tcagctcacccacagaccagacca 62 ||||||||||||| |||||||||| Sbjct: 52473 tcagctcacccactgaccagacca 52450
>gb|AC108401.19| Mus musculus chromosome 12, clone RP24-98A23, complete sequence Length = 213381 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 ggcaaggatgctgctgaac 108 ||||||||||||||||||| Sbjct: 209376 ggcaaggatgctgctgaac 209394
>gb|AC122191.4| Mus musculus BAC clone RP23-42J4 from 6, complete sequence Length = 250147 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 tcacccacagaccagacca 62 ||||||||||||||||||| Sbjct: 183066 tcacccacagaccagacca 183084
>gb|AC122832.4| Mus musculus BAC clone RP23-179D3 from 12, complete sequence Length = 224056 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 ggcaaggatgctgctgaac 108 ||||||||||||||||||| Sbjct: 165186 ggcaaggatgctgctgaac 165168
>gb|AC093252.3| Homo sapiens chromosome 5 clone RP11-15B5, complete sequence Length = 143060 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 87 agcggcaaggatgctgctg 105 ||||||||||||||||||| Sbjct: 121021 agcggcaaggatgctgctg 121003
>gb|AC116349.2| Homo sapiens chromosome 5 clone RP11-30F18, complete sequence Length = 164891 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 agcggcaaggatgctgctg 105 ||||||||||||||||||| Sbjct: 78863 agcggcaaggatgctgctg 78881
>gb|AF034099.3|AF034099 Laccaria bicolor malate synthase protein mRNA, complete cds Length = 1802 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 cacagtgatcagctcaccc 49 ||||||||||||||||||| Sbjct: 1444 cacagtgatcagctcaccc 1426
>emb|CR926318.2| Xenopus tropicalis finished cDNA, clone TEgg046h12 Length = 2950 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 gttcacacacagtgatcagctca 46 ||||||||||||||| ||||||| Sbjct: 1723 gttcacacacagtgagcagctca 1701 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 921,104 Number of Sequences: 3902068 Number of extensions: 921104 Number of successful extensions: 60256 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60237 Number of HSP's gapped (non-prelim): 19 length of query: 132 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 111 effective length of database: 17,151,101,840 effective search space: 1903772304240 effective search space used: 1903772304240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)