ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast41h03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.21... 38 0.013
2GRN_RAT (P23785) Granulins precursor [Contains: Acrogranin; Gran... 33 0.24
3COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1... 32 0.54
4IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (E... 32 0.54
5GRN_MOUSE (P28798) Granulins precursor (Proepithelin) (PEPI) (PC... 30 3.5

>LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.210) (Limonoid|
           glucosyltransferase) (Limonoid GTase) (LGTase)
          Length = 511

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 23/103 (22%), Positives = 46/103 (44%)
 Frame = +1

Query: 127 HFLVVTYPAQGHINPXXXXXXXXXXXTPGARVTVSTAVSACRKMFPXXXXXXXXXXXXXX 306
           H L+V++P  GH+NP           + G  +T++T  S  ++M                
Sbjct: 8   HVLLVSFPGHGHVNP--LLRLGRLLASKGFFLTLTTPESFGKQMRKAGNFTYEPTPVGDG 65

Query: 307 GVRYVPYSDGYDGGFDKSAHDSTDYMSNLKVVGARTLDGVLAR 435
            +R+  + DG+D   D    D   YM+ L+++G + +  ++ +
Sbjct: 66  FIRFEFFEDGWDED-DPRREDLDQYMAQLELIGKQVIPKIIKK 107



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>GRN_RAT (P23785) Granulins precursor [Contains: Acrogranin; Granulin-1|
           (Granulin G); Granulin-2 (Granulin F); Granulin-3
           (Granulin B) (Epithelin-2); Granulin-4 (Granulin A)
           (Epithelin-1); Granulin-5 (Granulin C); Granulin-6
           (Granulin D); Granulin-7 (Gran
          Length = 588

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 102 GRHCCVRAMRCECKKTRAYQVSKSVLTGVGCGGS 1
           G+HCC R   C        Q+S S+L  V C GS
Sbjct: 95  GQHCCPRGFHCSADGKSCSQISDSLLGAVQCPGS 128



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>COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1.-) (Zeatin|
           O-glucosyltransferase 2)
          Length = 489

 Score = 32.3 bits (72), Expect = 0.54
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1

Query: 118 EAPHFLVVTYPAQGHINP 171
           + PH + V YPAQGHINP
Sbjct: 10  QKPHVVCVPYPAQGHINP 27



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>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)|
           (IAA-Glu synthetase) ((Uridine
           5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl
           transferase)
          Length = 471

 Score = 32.3 bits (72), Expect = 0.54
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 121 APHFLVVTYPAQGHINP 171
           APH LVV +P QGH+NP
Sbjct: 2   APHVLVVPFPGQGHMNP 18



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>GRN_MOUSE (P28798) Granulins precursor (Proepithelin) (PEPI) (PC cell-derived|
           growth factor) (PCDGF) [Contains: Acrogranin;
           Granulin-1; Granulin-2; Granulin-3; Granulin-4;
           Granulin-5; Granulin-6; Granulin-7]
          Length = 589

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 102 GRHCCVRAMRCECKKTRAYQVSKSVLTGVGCGGS 1
           G HCC +   C       +Q+S + L  V C GS
Sbjct: 95  GYHCCPQGFHCSADGKSCFQMSDNPLGAVQCPGS 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,833,965
Number of Sequences: 219361
Number of extensions: 477529
Number of successful extensions: 1287
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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