| Clone Name | bast41g12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, complete cds Length = 1282 Score = 260 bits (131), Expect = 1e-66 Identities = 143/147 (97%) Strand = Plus / Plus Query: 54 ccatggcgagcagcggcagcctggccggtctggcggtgctgctcaccgccgtgctgtgcc 113 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 63 ccatggcgagcagcggcgggctggccggtctggcggtgctgctcaccgccgtgctgtgcc 122 Query: 114 tgcagctgccggtccacagccgcgcccagctgcgcgtcgggttctacaacaccacctgcc 173 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 123 tgcagctgccggtccacagccgcgcgcagctgcgcgtggggttctacaacaccacctgcc 182 Query: 174 ccaacgccgaggccatcgtccggcagg 200 ||||||||||||||||||||||||||| Sbjct: 183 ccaacgccgaggccatcgtccggcagg 209
>ref|NM_183815.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1071 Score = 60.0 bits (30), Expect = 3e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgag 184 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| Sbjct: 73 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgag 126
>emb|AJ401274.1|ZMA401274 Zea mays mRNA for peroxidase (pox1 gene) Length = 1398 Score = 60.0 bits (30), Expect = 3e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 155 ttctacaacaccacctgccccaacgccgaggccatcgtccggcagg 200 |||||| |||||| ||||||||||||||||||| ||||||| |||| Sbjct: 168 ttctacgacaccagctgccccaacgccgaggccctcgtccgccagg 213
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 60.0 bits (30), Expect = 3e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgag 184 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| Sbjct: 12534345 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgag 12534398 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 146 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcagg 200 ||||||||||||||| | | || |||||||||||||||||| ||||||| |||| Sbjct: 12482977 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccagg 12483031 Score = 52.0 bits (26), Expect = 7e-04 Identities = 59/70 (84%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 190 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 12547310 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 12547369 Query: 191 gtccggcagg 200 |||||||||| Sbjct: 12547370 gtccggcagg 12547379 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 gccgcgcccagctgcgcgt 150 ||||||||||||||||||| Sbjct: 12720268 gccgcgcccagctgcgcgt 12720250 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 cttcagctaagctaagcta 49 ||||||||||||||||||| Sbjct: 7258723 cttcagctaagctaagcta 7258741
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 60.0 bits (30), Expect = 3e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgag 184 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| Sbjct: 45955 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgag 46008 Score = 52.0 bits (26), Expect = 7e-04 Identities = 59/70 (84%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 190 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 58920 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 58979 Query: 191 gtccggcagg 200 |||||||||| Sbjct: 58980 gtccggcagg 58989
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 60.0 bits (30), Expect = 3e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgag 184 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| Sbjct: 119960 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgag 120013 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 146 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcagg 200 ||||||||||||||| | | || |||||||||||||||||| ||||||| |||| Sbjct: 68592 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccagg 68646 Score = 52.0 bits (26), Expect = 7e-04 Identities = 59/70 (84%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 190 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 132925 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 132984 Query: 191 gtccggcagg 200 |||||||||| Sbjct: 132985 gtccggcagg 132994
>dbj|AK121616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C11, full insert sequence Length = 5938 Score = 60.0 bits (30), Expect = 3e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgag 184 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| Sbjct: 135 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgag 188
>tpe|BN000543.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx14 gene for class III peroxidase 14 precursor, exons 1-3 Length = 5620 Score = 60.0 bits (30), Expect = 3e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgag 184 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| Sbjct: 73 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgag 126
>ref|NM_183810.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 146 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcagg 200 ||||||||||||||| | | || |||||||||||||||||| ||||||| |||| Sbjct: 70 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccagg 124
>dbj|AK068894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001H23, full insert sequence Length = 1382 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 146 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcagg 200 ||||||||||||||| | | || |||||||||||||||||| ||||||| |||| Sbjct: 177 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccagg 231
>tpe|BN000541.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx12 gene for class III peroxidase 12 precursor, exons 1-3 Length = 3928 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 146 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcagg 200 ||||||||||||||| | | || |||||||||||||||||| ||||||| |||| Sbjct: 70 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccagg 124
>ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 52.0 bits (26), Expect = 7e-04 Identities = 59/70 (84%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 190 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 76 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 135 Query: 191 gtccggcagg 200 |||||||||| Sbjct: 136 gtccggcagg 145
>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full insert sequence Length = 1271 Score = 52.0 bits (26), Expect = 7e-04 Identities = 59/70 (84%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 190 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 146 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 205 Query: 191 gtccggcagg 200 |||||||||| Sbjct: 206 gtccggcagg 215
>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full insert sequence Length = 1492 Score = 52.0 bits (26), Expect = 7e-04 Identities = 59/70 (84%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 190 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 151 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 210 Query: 191 gtccggcagg 200 |||||||||| Sbjct: 211 gtccggcagg 220
>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for class III peroxidase 15 precursor, exons 1-3 Length = 5322 Score = 52.0 bits (26), Expect = 7e-04 Identities = 59/70 (84%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 190 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 76 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 135 Query: 191 gtccggcagg 200 |||||||||| Sbjct: 136 gtccggcagg 145
>dbj|AK060115.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E07, full insert sequence Length = 1008 Score = 48.1 bits (24), Expect = 0.010 Identities = 48/56 (85%) Strand = Plus / Plus Query: 131 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggc 186 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| Sbjct: 149 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggc 204
>gb|BC056999.1| Mus musculus neuropathy target esterase, mRNA (cDNA clone MGC:66981 IMAGE:6831507), complete cds Length = 4461 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tggcggtgctgctcaccgccgtgct 108 ||||||||||| ||||||||||||| Sbjct: 289 tggcggtgctggtcaccgccgtgct 313
>gb|BC054789.1| Mus musculus neuropathy target esterase, mRNA (cDNA clone MGC:65634 IMAGE:6831507), complete cds Length = 4461 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tggcggtgctgctcaccgccgtgct 108 ||||||||||| ||||||||||||| Sbjct: 289 tggcggtgctggtcaccgccgtgct 313
>dbj|AK162641.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830134O04 product:neuropathy target esterase, full insert sequence Length = 3840 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tggcggtgctgctcaccgccgtgct 108 ||||||||||| ||||||||||||| Sbjct: 244 tggcggtgctggtcaccgccgtgct 268
>dbj|AK040720.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530020D05 product:neuropathy target esterase, full insert sequence Length = 2892 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tggcggtgctgctcaccgccgtgct 108 ||||||||||| ||||||||||||| Sbjct: 325 tggcggtgctggtcaccgccgtgct 349
>dbj|AK089095.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430039F18 product:neuropathy target esterase, full insert sequence Length = 4265 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tggcggtgctgctcaccgccgtgct 108 ||||||||||| ||||||||||||| Sbjct: 232 tggcggtgctggtcaccgccgtgct 256
>gb|AF173829.1|AF173829 Mus musculus neuropathy target esterase homolog mRNA, complete cds Length = 4459 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tggcggtgctgctcaccgccgtgct 108 ||||||||||| ||||||||||||| Sbjct: 271 tggcggtgctggtcaccgccgtgct 295
>ref|NM_015801.1| Mus musculus neuropathy target esterase (Nte), mRNA Length = 4459 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tggcggtgctgctcaccgccgtgct 108 ||||||||||| ||||||||||||| Sbjct: 271 tggcggtgctggtcaccgccgtgct 295
>gb|AC170806.2| Mus musculus BAC clone RP24-363P6 from chromosome 8, complete sequence Length = 182564 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tggcggtgctgctcaccgccgtgct 108 ||||||||||| ||||||||||||| Sbjct: 43546 tggcggtgctggtcaccgccgtgct 43570
>gb|AY816748.1| Synthetic construct clone pcNiV-Fopt C-terminal-Au1-tagged F protein gene, complete cds Length = 1659 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 acaacaccacctgccccaacgccg 182 |||||||||||||||||| ||||| Sbjct: 1238 acaacaccacctgccccaccgccg 1261
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 cctggccggtctggcggtgctgct 96 ||||||||||||||| |||||||| Sbjct: 952400 cctggccggtctggccgtgctgct 952377
>gb|AC132936.9| Homo sapiens chromosome 11, clone RP13-569C6, complete sequence Length = 178778 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 tgctgtgcctgcagctgccggtcc 128 ||||||||||||||||||| |||| Sbjct: 65419 tgctgtgcctgcagctgcccgtcc 65442
>dbj|AP006623.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-1391J07, complete sequence Length = 121103 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 tgctgtgcctgcagctgccggtcc 128 ||||||||||||||||||| |||| Sbjct: 54446 tgctgtgcctgcagctgcccgtcc 54423
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcggcagcctggccggtctg 85 |||||||||||||||||||| Sbjct: 4650072 gcggcagcctggccggtctg 4650053
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 174 ccaacgccgaggccatcgt 192 ||||||||||||||||||| Sbjct: 2009088 ccaacgccgaggccatcgt 2009106
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 ggcggtgctgctcaccgcc 103 ||||||||||||||||||| Sbjct: 744022 ggcggtgctgctcaccgcc 744040
>ref|NM_183855.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 gccgcgcccagctgcgcgt 150 ||||||||||||||||||| Sbjct: 980 gccgcgcccagctgcgcgt 962
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 118 gctgccggtccacagccgc 136 ||||||||||||||||||| Sbjct: 1079476 gctgccggtccacagccgc 1079494
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 gccggtctggcggtgctgc 95 ||||||||||||||||||| Sbjct: 3636936 gccggtctggcggtgctgc 3636954
>ref|XM_428217.1| PREDICTED: Gallus gallus similar to hypothetical Ypt/Rab-GAP domain of gyp1p structure containing protein (LOC430664), partial mRNA Length = 782 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 181 cgaggccatcgtccggcag 199 ||||||||||||||||||| Sbjct: 664 cgaggccatcgtccggcag 682
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ctggcggtgctgctcaccg 101 ||||||||||||||||||| Sbjct: 534187 ctggcggtgctgctcaccg 534205
>ref|XM_419251.1| PREDICTED: Gallus gallus similar to kelch-like 12; kelch-like protein C3IP1 (LOC421171), mRNA Length = 3639 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 gtgctgtgcctgcagctgc 122 ||||||||||||||||||| Sbjct: 697 gtgctgtgcctgcagctgc 715
>ref|XM_363678.1| Magnaporthe grisea 70-15 hypothetical protein (MG01604.4) partial mRNA Length = 1125 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 178 cgccgaggccatcgtccggcagg 200 |||||||||||||||||| |||| Sbjct: 882 cgccgaggccatcgtccgccagg 904
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 176 aacgccgaggccatcgtccggca 198 |||||| |||||||||||||||| Sbjct: 5996854 aacgcccaggccatcgtccggca 5996876
>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence Length = 207268 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 ggcgagcagcggcagcctg 76 ||||||||||||||||||| Sbjct: 103678 ggcgagcagcggcagcctg 103696
>ref|XM_843110.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0508) partial mRNA Length = 1683 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 118 gctgccggtccacagccgc 136 ||||||||||||||||||| Sbjct: 1612 gctgccggtccacagccgc 1630
>gb|AC017000.5| Homo sapiens BAC clone RP11-42B7 from 7, complete sequence Length = 154844 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 169 ctgccccaacgccgaggcc 187 ||||||||||||||||||| Sbjct: 114573 ctgccccaacgccgaggcc 114555
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 147 gcgtcgggttctacaacaccacc 169 |||||| |||||||||||||||| Sbjct: 2652734 gcgtcgtgttctacaacaccacc 2652712
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 gcagcggcagcctggccgg 81 ||||||||||||||||||| Sbjct: 3005842 gcagcggcagcctggccgg 3005860
>gb|AC091403.3| Sus scrofa clone RP44-431F19, complete sequence Length = 80906 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 113 ctgcagctgccggtccaca 131 ||||||||||||||||||| Sbjct: 75029 ctgcagctgccggtccaca 75011
>gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence Length = 164663 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 113 ctgcagctgccggtccaca 131 ||||||||||||||||||| Sbjct: 2671 ctgcagctgccggtccaca 2653
>emb|Z72584.1|SCYGL062W S.cerevisiae chromosome VII reading frame ORF YGL062w Length = 4201 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 ttctacaacaccacctgcc 173 ||||||||||||||||||| Sbjct: 2514 ttctacaacaccacctgcc 2496
>gb|AE008725.1| Salmonella typhimurium LT2, section 33 of 220 of the complete genome Length = 24057 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 82 tctggcggtgctgctcaccgccg 104 ||||||||||||| ||||||||| Sbjct: 21275 tctggcggtgctggtcaccgccg 21253
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 gccggtctggcggtgctgc 95 ||||||||||||||||||| Sbjct: 174373 gccggtctggcggtgctgc 174391
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 gccggtctggcggtgctgc 95 ||||||||||||||||||| Sbjct: 153636 gccggtctggcggtgctgc 153654
>emb|AL627267.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 3/20 Length = 240050 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 82 tctggcggtgctgctcaccgccg 104 ||||||||||||| ||||||||| Sbjct: 174830 tctggcggtgctggtcaccgccg 174808
>gb|AC091209.3| Drosophila melanogaster 3L BAC RP98-3G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194979 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 gccgtgctgtgcctgcagc 119 ||||||||||||||||||| Sbjct: 125347 gccgtgctgtgcctgcagc 125365
>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence Length = 271577 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 ggcggtgctgctcaccgcc 103 ||||||||||||||||||| Sbjct: 254038 ggcggtgctgctcaccgcc 254020
>gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172540 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 gccgtgctgtgcctgcagc 119 ||||||||||||||||||| Sbjct: 131198 gccgtgctgtgcctgcagc 131180
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 106 gctgtgcctgcagctgccg 124 ||||||||||||||||||| Sbjct: 1327407 gctgtgcctgcagctgccg 1327389
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 gcagcggcagcctggccgg 81 ||||||||||||||||||| Sbjct: 2454158 gcagcggcagcctggccgg 2454140
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 agctaagctaagctagcca 53 ||||||||||||||||||| Sbjct: 344028 agctaagctaagctagcca 344046
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 agctaagctaagctagcca 53 ||||||||||||||||||| Sbjct: 340430 agctaagctaagctagcca 340448
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 cttcagctaagctaagcta 49 ||||||||||||||||||| Sbjct: 4205264 cttcagctaagctaagcta 4205246
>gb|AC004952.2|AC004952 Homo sapiens PAC clone RP5-1032D7 from 7p22, complete sequence Length = 137057 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 169 ctgccccaacgccgaggcc 187 ||||||||||||||||||| Sbjct: 26994 ctgccccaacgccgaggcc 27012
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 cttcagctaagctaagcta 49 ||||||||||||||||||| Sbjct: 60153 cttcagctaagctaagcta 60171
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 82 tctggcggtgctgctcaccgccg 104 ||||||||||||| ||||||||| Sbjct: 2173383 tctggcggtgctggtcaccgccg 2173405
>gb|AC121540.14| Mus musculus chromosome 3, clone RP23-48L9, complete sequence Length = 224634 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 catggcgagcagcggcagc 73 ||||||||||||||||||| Sbjct: 192591 catggcgagcagcggcagc 192609
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 cttcagctaagctaagcta 49 ||||||||||||||||||| Sbjct: 50485 cttcagctaagctaagcta 50467
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 178 cgccgaggccatcgtccggcagg 200 |||||||||||||| |||||||| Sbjct: 4743057 cgccgaggccatcgaccggcagg 4743035 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 163 caccacctgccccaacgccgagg 185 |||||||||||||| |||||||| Sbjct: 2813050 caccacctgccccagcgccgagg 2813072
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 gccgcgcccagctgcgcgt 150 ||||||||||||||||||| Sbjct: 667 gccgcgcccagctgcgcgt 649
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 gccgcgcccagctgcgcgt 150 ||||||||||||||||||| Sbjct: 87297 gccgcgcccagctgcgcgt 87279
>dbj|AK120056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O15, full insert sequence Length = 1895 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 gccgcgcccagctgcgcgt 150 ||||||||||||||||||| Sbjct: 1203 gccgcgcccagctgcgcgt 1185
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 60 cgagcagcggcagcctggc 78 ||||||||||||||||||| Sbjct: 2823566 cgagcagcggcagcctggc 2823548
>dbj|AK065945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049F17, full insert sequence Length = 2088 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 agctaagctaagctagcca 53 ||||||||||||||||||| Sbjct: 30 agctaagctaagctagcca 48
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 82 tctggcggtgctgctcaccgccg 104 ||||||||||||| ||||||||| Sbjct: 2287241 tctggcggtgctggtcaccgccg 2287263
>gb|AE003532.3| Drosophila melanogaster chromosome 3L, section 53 of 83 of the complete sequence Length = 295875 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 gccgtgctgtgcctgcagc 119 ||||||||||||||||||| Sbjct: 185900 gccgtgctgtgcctgcagc 185918
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 82 tctggcggtgctgctcaccgccg 104 ||||||||||||| ||||||||| Sbjct: 751628 tctggcggtgctggtcaccgccg 751606
>gb|DQ332274.1| Synthetic construct Saccharomyces cerevisiae clone FLH148285.01X PYC1 gene, complete sequence Length = 3537 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 ttctacaacaccacctgcc 173 ||||||||||||||||||| Sbjct: 2085 ttctacaacaccacctgcc 2067
>dbj|D86544.1| Burkholderia pickettii DNA for hydroxyquinol-1, 2-dioxygenase and Chlorophenol-4-hydroxylase,complete cds Length = 4820 Score = 38.2 bits (19), Expect = 10.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 75 tggccggtctggcggtgctgctcaccg 101 ||||||| |||||||||||| |||||| Sbjct: 1299 tggccggcctggcggtgctgatcaccg 1325
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 agctaagctaagctagcca 53 ||||||||||||||||||| Sbjct: 340430 agctaagctaagctagcca 340448
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 agctaagctaagctagcca 53 ||||||||||||||||||| Sbjct: 344028 agctaagctaagctagcca 344046
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 agctaagctaagctagcca 53 ||||||||||||||||||| Sbjct: 77079 agctaagctaagctagcca 77097
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 agctaagctaagctagcca 53 ||||||||||||||||||| Sbjct: 47748 agctaagctaagctagcca 47766
>gb|AY360100.1| Valeriana montana internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 507 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 182 gaggccatcgtccggcagg 200 ||||||||||||||||||| Sbjct: 348 gaggccatcgtccggcagg 330
>gb|J03889.1|YSCPCB Yeast (S.cerevisiae) pyruvate carboxylase subunit 4 (pyv) gene, complete cds Length = 5065 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 ttctacaacaccacctgcc 173 ||||||||||||||||||| Sbjct: 2960 ttctacaacaccacctgcc 2942 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,366,591 Number of Sequences: 3902068 Number of extensions: 1366591 Number of successful extensions: 110905 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108032 Number of HSP's gapped (non-prelim): 2873 length of query: 200 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 178 effective length of database: 17,147,199,772 effective search space: 3052201559416 effective search space used: 3052201559416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)