ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast41f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MCCB_ARATH (Q9LDD8) Methylcrotonoyl-CoA carboxylase beta chain, ... 28 5.3
2AMT4_PSESA (P22963) Glucan 1,4-alpha-maltotetraohydrolase precur... 27 9.0

>MCCB_ARATH (Q9LDD8) Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial|
           precursor (EC 6.4.1.4) (3-Methylcrotonyl-CoA carboxylase
           2) (MCCase beta subunit) (3-methylcrotonyl-CoA:carbon
           dioxide ligase beta subunit)
          Length = 587

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 331 TSPSSWRRRPGTSHRPNP 278
           TS   WR RPGT  RP+P
Sbjct: 17  TSIQQWRIRPGTDSRPDP 34



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>AMT4_PSESA (P22963) Glucan 1,4-alpha-maltotetraohydrolase precursor (EC|
           3.2.1.60) (G4-amylase) (Maltotetraose-forming amylase)
           (Exo-maltotetraohydrolase) (Maltotetraose-forming
           exo-amylase)
          Length = 551

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 306 RRRQEEGDVRPQRHGLRGAPDP 371
           + R + G V   +HGL G PDP
Sbjct: 280 KERMQNGSVADWKHGLNGNPDP 301


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,071,061
Number of Sequences: 219361
Number of extensions: 186679
Number of successful extensions: 421
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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