>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23,
              complete sequence
          Length = 149353

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1      agagaggagaaaagaaaaaaca 22
              ||||||||||||||||||||||
Sbjct: 146590 agagaggagaaaagaaaaaaca 146611

>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02,
             complete sequence
          Length = 153623

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1     agagaggagaaaagaaaaaaca 22
             ||||||||||||||||||||||
Sbjct: 65973 agagaggagaaaagaaaaaaca 65994

>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence
          Length = 181577

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1      agagaggagaaaagaaaaaaca 22
              ||||||||||||||||||||||
Sbjct: 146708 agagaggagaaaagaaaaaaca 146729

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1        agagaggagaaaagaaaaaaca 22
                ||||||||||||||||||||||
Sbjct: 33715530 agagaggagaaaagaaaaaaca 33715551

>emb|AL731768.3| Human DNA sequence from clone RP13-324D24 on chromosome X, complete
             sequence
          Length = 68444

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     agagaggagaaaagaaaaaac 21
             |||||||||||||||||||||
Sbjct: 26331 agagaggagaaaagaaaaaac 26351

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 78      ggcgagcagcggcctccgcgtccag 102
               ||||||||||| |||||||||||||
Sbjct: 5604287 ggcgagcagcgacctccgcgtccag 5604263

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 33      ccgcgcgcgattccgtccaga 53
               |||||||||||||||||||||
Sbjct: 1702859 ccgcgcgcgattccgtccaga 1702839

>gb|AF065159.3|AF065159 Bradyrhizobium japonicum putative arylsulfatase (arsA), putative
             soluble lytic transglycosylase precursor (sltA),
             dihydrodipicolinate synthase (dapA), MscL (mscL), SmpB
             (smpB), BcpB (bcpB), RnpO (rnpO), RelA/SpoT homolog
             (relA), PdxJ (pdxJ), and acyl carrier protein synthase
             AcpS (acpS) genes, complete cds; prokaryotic type I signal
             peptidase SipF (sipF) gene, sipF-sipS allele, complete
             cds; RNase III (rnc), GTP-binding protein Era (era),
             hypothetical protein, recO-like protein, topoisomerase II
             (gyrA), putative ABC transporter, putative
             GMC-oxidoreductase, hypothetical protein, putative
             cytochrome C binding protein (cyc4), putative polytopic
             integral membrane protein, superoxide dismutase SodM-like
             protein, putative inner membrane protein, AttM-like
             protein (attM), adenylate cyclases-like protein, and
             putative inner membrane protein (spcT) genes, complete
             cds; and unknown genes
          Length = 35209

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 78    ggcgagcagcggcctccgcgtccag 102
             ||||||||||| |||||||||||||
Sbjct: 26111 ggcgagcagcgacctccgcgtccag 26135

>emb|BX649429.13| Zebrafish DNA sequence from clone DKEY-1H4 in linkage group 7, complete
              sequence
          Length = 268480

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 5      aggagaaaagaaaaaacattc 25
              |||||||||||||||||||||
Sbjct: 236169 aggagaaaagaaaaaacattc 236149

>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11
              map near 50283S, complete sequence
          Length = 148306

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    gcgccgcgcggatgtcgtgc 307
              ||||||||||||||||||||
Sbjct: 125561 gcgccgcgcggatgtcgtgc 125542

>gb|AC113589.13| Mus musculus chromosome 9, clone RP23-257A19, complete sequence
          Length = 213826

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    agagaggagaaaagaaaaaa 20
            ||||||||||||||||||||
Sbjct: 8173 agagaggagaaaagaaaaaa 8154

>gb|AC113016.7| Mus musculus chromosome 9, clone RP23-181L13, complete sequence
          Length = 213244

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      agaggagaaaagaaaaaaca 22
              ||||||||||||||||||||
Sbjct: 156342 agaggagaaaagaaaaaaca 156361

>emb|AL929472.21| Human DNA sequence from clone RP11-109P14 on chromosome 1 Contains a
              pseudogene similar to part of actinin alpha4 (ACTN4), a
              novel pseudogene, two genes for novel proteins (FLJ31434,
              FLJ45459), the gene for ischemia/reperfusion inducible
              protein (FLJ23476), the MTF1 gene for metal-regulatory
              transcription factor 1, a ribosomal protein S2 (RPS2)
              pseudogene, the 3' end of the INPP5B gene for 75kDa nositol
              polyphosphate-5-phosphatase, two novel genes and four CpG
              islands, complete sequence
          Length = 143060

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      agagaggagaaaagaaaaaa 20
              ||||||||||||||||||||
Sbjct: 113082 agagaggagaaaagaaaaaa 113063

>emb|AL354757.7| Human DNA sequence from clone RP11-480O9 on chromosome 13, complete
             sequence
          Length = 72800

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     gagaggagaaaagaaaaaac 21
             ||||||||||||||||||||
Sbjct: 67745 gagaggagaaaagaaaaaac 67764

>gb|AC076971.25| Homo sapiens 3 BAC RP11-525O8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 75323

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     agagaggagaaaagaaaaaa 20
             ||||||||||||||||||||
Sbjct: 66920 agagaggagaaaagaaaaaa 66901

>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     tcacccgccgcggcgtcgtc 74
              ||||||||||||||||||||
Sbjct: 196790 tcacccgccgcggcgtcgtc 196771

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 288     gcgccgcgcggatgtcgtgcgcgg 311
               ||||||||| ||||||||||||||
Sbjct: 3629900 gcgccgcgcagatgtcgtgcgcgg 3629877

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 288      gcgccgcgcggatgtcgtgc 307
                ||||||||||||||||||||
Sbjct: 13992724 gcgccgcgcggatgtcgtgc 13992705

>gb|AC097461.3| Homo sapiens BAC clone RP11-16P6 from 2, complete sequence
          Length = 169828

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      agaaaagaaaaaacattcgg 27
              ||||||||||||||||||||
Sbjct: 117550 agaaaagaaaaaacattcgg 117531

>emb|AL929281.7| Zebrafish DNA sequence from clone CH211-237I22, complete sequence
          Length = 148678

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  tcgctgacgagtcggggcag 332
            ||||||||||||||||||||
Sbjct: 2322 tcgctgacgagtcggggcag 2303

>dbj|AP006625.1| Homo sapiens genomic DNA, chromosome 11, clone:CMF9-312K1, complete
             sequence
          Length = 40571

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     agagaggagaaaagaaaaaa 20
             ||||||||||||||||||||
Sbjct: 34934 agagaggagaaaagaaaaaa 34915

>dbj|AP002784.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-680H20, complete
             sequence
          Length = 179051

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     agagaggagaaaagaaaaaa 20
             ||||||||||||||||||||
Sbjct: 86478 agagaggagaaaagaaaaaa 86459

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 288      gcgccgcgcggatgtcgtgc 307
                ||||||||||||||||||||
Sbjct: 14074726 gcgccgcgcggatgtcgtgc 14074707

>emb|CT025562.10| Mouse DNA sequence from clone RP24-225O12 on chromosome 14, complete
             sequence
          Length = 194430

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aggagaaaagaaaaaacatt 24
             ||||||||||||||||||||
Sbjct: 73503 aggagaaaagaaaaaacatt 73522

>gb|U21743.1|BNU21743 Brassica napus germin-like protein mRNA, complete cds
          Length = 801

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   agaggagaaaagaaaaaaca 22
           ||||||||||||||||||||
Sbjct: 690 agaggagaaaagaaaaaaca 671

>gb|AC162803.2| Mus musculus BAC clone RP23-376G22 from chromosome 9, complete sequence
          Length = 164863

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     agagaggagaaaagaaaaaa 20
             ||||||||||||||||||||
Sbjct: 48499 agagaggagaaaagaaaaaa 48518


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,389,647
Number of Sequences: 3902068
Number of extensions: 3389647
Number of successful extensions: 70905
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70553
Number of HSP's gapped (non-prelim): 352
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)