>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor|
          Length = 424

 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 31/65 (47%), Positives = 44/65 (67%)
 Frame = +1

Query: 208 NITAAMAKGGCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRSFMPRYKNLTADG 387
           N+T  M+  GCK FA  +  +P A  T+Q + +GG+T FCP DDA++ F+P+YKNLTA  
Sbjct: 186 NLTGIMSAHGCKVFAETLLTNPGASKTYQESLEGGMTVFCPGDDAMKGFLPKYKNLTAPK 245

Query: 388 KASLL 402
           K + L
Sbjct: 246 KEAFL 250

>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor|
          Length = 422

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = +1

Query: 208 NITAAMAKGGCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRS-FMPRYKNLTAD 384
           NIT  + K GCK FA L+ +S     TF+S  + G+T F PSD+A ++  +P   NLT  
Sbjct: 190 NITGLLEKAGCKTFANLLVSS-GVIKTFESTVEKGLTVFAPSDEAFKARGVPDLTNLTQA 248

Query: 385 GKASLL 402
              SLL
Sbjct: 249 EVVSLL 254

>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor|
           (AtAGP8)
          Length = 420

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = +1

Query: 208 NITAAMAKGGCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRS-FMPRYKNLTAD 384
           NIT  + K GCK FA L+ +S     T++SA + G+T F PSD+A ++  +P    LT  
Sbjct: 189 NITGLLEKAGCKTFANLLVSS-GVLKTYESAVEKGLTVFAPSDEAFKAEGVPDLTKLTQA 247

Query: 385 GKASLL 402
              SLL
Sbjct: 248 EVVSLL 253

>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog|
          Length = 133

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 241 KAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRSFMP 360
           + F+ LVAA   A      AG+G  T F P+DDA     P
Sbjct: 12  EGFSTLVAAVQAAGLVETLAGEGDFTVFAPNDDAFAKLPP 51

>BGH3_HUMAN (Q15582) Transforming growth factor-beta-induced protein ig-h3|
           precursor (Beta ig-h3) (Kerato-epithelin)
           (RGD-containing collagen-associated protein) (RGD-CAP)
          Length = 683

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 235 GCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRSFMPRYKN-LTADGK 390
           G   F+ LVAA   A  T     +G  T F P+++A R+  PR ++ L  D K
Sbjct: 511 GDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAK 563

>LIMK1_MOUSE (P53668) LIM domain kinase 1 (EC 2.7.11.1) (LIMK-1) (KIZ-1)|
          Length = 647

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 374 RFLYLGMKDLTASSLGQNAVTPPSPADWNVECASGEAATRA 252
           R L L ++     SLG   V+ PSP    V   SG+AA+ A
Sbjct: 248 RLLQLTLEHDPHDSLGHGPVSDPSPLSSPVHTPSGQAASSA 288

>Y4ZC_RHISN (P55730) Putative cysteine protease yopT-like y4zC (EC 3.4.22.-)|
          Length = 261

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 11/57 (19%)
 Frame = +1

Query: 235 GCKAFAALVAASPDAHSTFQSAGDGGVTAFCPS-----------DDAVRSFMPRYKN 372
           G     +L  A   AH+   SA DG  T F P+           DD  RS   RY N
Sbjct: 190 GSNHLLSLYFAEGGAHTVATSAMDGNTTLFDPNFGEFTVQSDQIDDLFRSLANRYSN 246

>PIM1_MOUSE (P06803) Proto-oncogene serine/threonine-protein kinase Pim-1 (EC|
           2.7.11.1)
          Length = 397

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 359 PGTRTSPPTARRRCC 403
           PG R SP + RRRCC
Sbjct: 56  PGRRLSPSSLRRRCC 70

>DLX3_MOUSE (Q64205) Homeobox protein DLX-3|
          Length = 287

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 314 TPPSPADWNVECASGEAATRAANALHPPLAIAA 216
           +PPSPA W+    S  A  R  N L PPL  +A
Sbjct: 209 SPPSPALWDTSSHSTPAPAR--NPLPPPLPYSA 239


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,866,243
Number of Sequences: 219361
Number of extensions: 463267
Number of successful extensions: 2043
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2039
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)