ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast41e09 |
|---|---|
| Clone Library Name | barley_pub |
>PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (Apase-1(1))| Length = 255 Score = 98.2 bits (243), Expect = 4e-21 Identities = 41/95 (43%), Positives = 58/95 (61%) Frame = +2 Query: 116 CDSWRLGVEAYNVRDWKTVPANCEGYVGHYMLGNHFRRDFKVVIDQAIAYVDGLKLNGNG 295 C +WR VE N+ WKT+P C YV YM+G ++ + V D+A Y + L +G Sbjct: 43 CTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEYAKSVDLGDDG 102 Query: 296 KDVWVFDIDETTLSNLPYYATHGFGARPYNATSFD 400 +DVW+FD+DET LSNLPYY+ H +G ++ FD Sbjct: 103 RDVWIFDVDETLLSNLPYYSDHRYGLEVFDDVEFD 137
>VSP2_ARATH (O82122) Vegetative storage protein 2 precursor| Length = 265 Score = 90.1 bits (222), Expect = 1e-18 Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 1/86 (1%) Frame = +2 Query: 116 CDSWRLGVEAYNVRDWKTVPANCEGYVGHYML-GNHFRRDFKVVIDQAIAYVDGLKLNGN 292 C SW LGVE N+ D+ TVPANC+ YV Y++ ++ D K V +A Y GL L + Sbjct: 52 CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKND 111 Query: 293 GKDVWVFDIDETTLSNLPYYATHGFG 370 +VW+FD+D+T LS++PYYA +G+G Sbjct: 112 TVNVWIFDLDDTLLSSIPYYAKYGYG 137
>VSP1_ARATH (O49195) Vegetative storage protein 1 precursor| Length = 270 Score = 87.4 bits (215), Expect = 7e-18 Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 1/86 (1%) Frame = +2 Query: 116 CDSWRLGVEAYNVRDWKTVPANCEGYVGHYML-GNHFRRDFKVVIDQAIAYVDGLKLNGN 292 C SW LGVE N+ ++ TVPANC+ YV Y++ ++ D K V +A Y GL L + Sbjct: 57 CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKND 116 Query: 293 GKDVWVFDIDETTLSNLPYYATHGFG 370 +VW+FD+D+T LS++PYYA +G+G Sbjct: 117 TINVWIFDLDDTLLSSIPYYAKYGYG 142
>VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein B) Length = 254 Score = 87.4 bits (215), Expect = 7e-18 Identities = 42/97 (43%), Positives = 58/97 (59%) Frame = +2 Query: 110 VPCDSWRLGVEAYNVRDWKTVPANCEGYVGHYMLGNHFRRDFKVVIDQAIAYVDGLKLNG 289 V C S+RL VEA+N+R +KT+P C Y+ G FR D K V QA Y +++ Sbjct: 41 VKCASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQQAFFYASEREVHH 100 Query: 290 NGKDVWVFDIDETTLSNLPYYATHGFGARPYNATSFD 400 N D+++F ID T LSN+PYY HG+G +N T +D Sbjct: 101 N--DIFIFGIDNTVLSNIPYYEKHGYGVEEFNETLYD 135
>VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetative storage| protein A) Length = 254 Score = 87.4 bits (215), Expect = 7e-18 Identities = 42/97 (43%), Positives = 58/97 (59%) Frame = +2 Query: 110 VPCDSWRLGVEAYNVRDWKTVPANCEGYVGHYMLGNHFRRDFKVVIDQAIAYVDGLKLNG 289 V C SWRL VEA+N+ ++T+P C Y+ G +R D K V QA Y L+++ Sbjct: 40 VKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEVHP 99 Query: 290 NGKDVWVFDIDETTLSNLPYYATHGFGARPYNATSFD 400 KD +VF ID T LSN+PYY HG+G +N+T +D Sbjct: 100 --KDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYD 134
>S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein VSP25) (Fragment) Length = 291 Score = 87.4 bits (215), Expect = 7e-18 Identities = 42/97 (43%), Positives = 58/97 (59%) Frame = +2 Query: 110 VPCDSWRLGVEAYNVRDWKTVPANCEGYVGHYMLGNHFRRDFKVVIDQAIAYVDGLKLNG 289 V C SWRL VEA+N+ ++T+P C Y+ G +R D K V QA Y L+++ Sbjct: 37 VKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEVHP 96 Query: 290 NGKDVWVFDIDETTLSNLPYYATHGFGARPYNATSFD 400 KD +VF ID T LSN+PYY HG+G +N+T +D Sbjct: 97 --KDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYD 131
>MMPL8_MYCTU (O07800) Putative membrane protein mmpL8| Length = 1089 Score = 30.8 bits (68), Expect = 0.81 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 134 GVEAYNVRDWKTVPANCEGYVGHYMLGNHF 223 G+ YN D KT+PA+ E +G+ L HF Sbjct: 418 GLARYNYDDRKTLPASVESSIGYAALDKHF 447
>THII_PSEPK (Q88CY4) Thiamine biosynthesis protein thiI| Length = 484 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 131 LGVEAYNVRDWKTVPANCEGYVGHYMLGNHF 223 L VE Y + D+ + A C+ + GH + G HF Sbjct: 79 LQVEEYPLGDFDDIVAKCKHHFGHLLAGKHF 109
>BUR1_ASPFU (Q4WTN5) Serine/threonine-protein kinase bur1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 580 Score = 29.3 bits (64), Expect = 2.3 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Frame = +2 Query: 149 NVRDWKTVPANCEGYVGHYMLGNHFRRDFKVVIDQAIAYVDGL-KLNGNGKDVWVFDIDE 325 N+ W ++P CEG R FK AI+ ++ L KL+ W I+ Sbjct: 265 NMPGWSSLPG-CEGVKSFGYKPGSLREVFKDQNPMAISLLEELLKLD------WRKRINA 317 Query: 326 TTLSNLPYYATHGFGARPYNATSFD 400 N PY+++ F ARP SF+ Sbjct: 318 IDAINHPYFSSPPFPARPGELPSFE 342
>FADE_SALTY (Q8ZRJ7) Acyl-coenzyme A dehydrogenase (EC 1.3.99.-) (ACDH)| Length = 814 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Frame = +2 Query: 125 WRLGVEAYNVRDWKTVPANCEGYVGHYMLGN----HFRRDFKVVI 247 WR+ VE +V T+P+N G V L H RR FK+ I Sbjct: 363 WRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISI 407
>FADE_SALTI (Q8Z937) Acyl-coenzyme A dehydrogenase (EC 1.3.99.-) (ACDH)| Length = 814 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Frame = +2 Query: 125 WRLGVEAYNVRDWKTVPANCEGYVGHYMLGN----HFRRDFKVVI 247 WR+ VE +V T+P+N G V L H RR FK+ I Sbjct: 363 WRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISI 407
>FADE_ECOLI (Q47146) Acyl-coenzyme A dehydrogenase (EC 1.3.99.-) (ACDH)| Length = 814 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Frame = +2 Query: 125 WRLGVEAYNVRDWKTVPANCEGYVGHYMLGN----HFRRDFKVVI 247 WR+ VE +V T+P+N G V L H RR FK+ I Sbjct: 363 WRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISI 407
>FADE_ECO57 (Q8X7R2) Acyl-coenzyme A dehydrogenase (EC 1.3.99.-) (ACDH)| Length = 814 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Frame = +2 Query: 125 WRLGVEAYNVRDWKTVPANCEGYVGHYMLGN----HFRRDFKVVI 247 WR+ VE +V T+P+N G V L H RR FK+ I Sbjct: 363 WRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISI 407
>NOS1_RABIT (O19132) Nitric-oxide synthase, brain (EC 1.14.13.39) (NOS type I)| (Neuronal NOS) (N-NOS) (nNOS) (Constitutive NOS) (NC-NOS) (bNOS) Length = 1435 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +2 Query: 224 RRDFKVVIDQAIAYVDGLKLNGNGKDVWVFDIDETTLSNLPYYATHGFGARPY 382 R+ +KV + +Y D K +G+G DV L+N+ ++ G G+R Y Sbjct: 844 RKSYKVRFNSVSSYSDSRKSSGDGPDVRDHFESAGPLANV-RFSVFGLGSRAY 895 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,972,158 Number of Sequences: 219361 Number of extensions: 437850 Number of successful extensions: 1329 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1317 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1323 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
