>MDR49_DROME (Q00449) Multidrug resistance protein homolog 49 (EC 3.6.3.44)|
            (P-glycoprotein 49)
          Length = 1302

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +1

Query: 97   LACRCKMRSRG--FALSHAAVFLAWWMVHCGGGLVAA 201
            +ACR K+R RG  FAL  AA FLA+ +    GG++ A
Sbjct: 952  VACRRKVRFRGLVFALGQAAPFLAYGISMYYGGILVA 988

>RIMB1_MOUSE (Q7TNF8) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (Peripheral benzodiazepine receptor-interacting
            protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1)
          Length = 1846

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = -1

Query: 166  TTRETPRHGSEQSHGSSSCTGKLASAELCSPA--SCAQTRPSSQLRLPLTS 20
            T R    HG       +     LASA  C PA  SC   RPS ++R PL S
Sbjct: 1052 TVRTMSPHGESSDSIPAPVAPALASA--CQPARMSCLSPRPSPEVRTPLAS 1100

>RIMB1_RAT (Q9JIR0) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (RIM-binding protein 1) (RIM-BP1)
          Length = 1847

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = -1

Query: 166  TTRETPRHGSEQSHGSSSCTGKLASAELCSPA--SCAQTRPSSQLRLPLTS 20
            T R    HG       +     LASA  C PA  SC   RPS ++R PL S
Sbjct: 1054 TVRTMSPHGESTDSIPAPVAPALASA--CQPARMSCLSPRPSPEVRTPLAS 1102

>HLES_DROME (Q02308) Protein hairless|
          Length = 1077

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 78  EQSSALASLPVQDEEPWLCSEPCRGVSR 161
           + +S++ S P Q ++PW  S P RG+S+
Sbjct: 300 DDNSSIQSSPWQRDQPWKQSRPRRGISK 327

>PO3F1_RAT (P20267) POU domain, class 3, transcription factor 1|
           (Octamer-binding transcription factor 6) (Oct-6)
           (POU-domain transcription factor SCIP) (Tst-1)
          Length = 451

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
 Frame = -3

Query: 266 AGSG*P-LQSVWAV*SYQPSGGTA----ATSPPPQCTIHH 162
           AG+G P +  V+A     P GG+A    A  PPP   +HH
Sbjct: 401 AGAGHPPMDDVYAPGELGPGGGSASPPSAPPPPPPAALHH 440

>PO3F1_MOUSE (P21952) POU domain, class 3, transcription factor 1|
           (Octamer-binding transcription factor 6) (Oct-6)
           (POU-domain transcription factor SCIP)
          Length = 449

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
 Frame = -3

Query: 266 AGSG*P-LQSVWAV*SYQPSGGTA----ATSPPPQCTIHH 162
           AG+G P +  V+A     P GG+A    A  PPP   +HH
Sbjct: 399 AGAGHPPMDDVYAPGELGPGGGSASPPSAPPPPPPAALHH 438

>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (Peripheral benzodiazepine receptor-interacting
            protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1)
          Length = 1857

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -1

Query: 145  HGSEQSHGSSSCTGKLASAELCSPASCAQTRPSSQLRLPLTS 20
            HG       +  T  LA A L +  SC    PS + R PL S
Sbjct: 1063 HGESADSIPAPITPALAPASLPARVSCPSPHPSPEARAPLAS 1104


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,041,825
Number of Sequences: 219361
Number of extensions: 799155
Number of successful extensions: 2868
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2864
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)