ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast41d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC136969.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
2gb|AC150775.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
5ref|XM_464870.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.093
6gb|AC093502.2| Drosophila melanogaster 3L BAC RP98-48C4 (Roswell... 46 0.093
7gb|AC010031.8| Drosophila melanogaster 3L BAC RP98-2M20 (Roswell... 46 0.093
8gb|AC104703.3| Drosophila melanogaster 3L BAC RP98-35M1 (Roswell... 46 0.093
9ref|NM_168564.1| Drosophila melanogaster CG32137-RA, transcript ... 46 0.093
10ref|NM_168563.1| Drosophila melanogaster CG32137-RB, transcript ... 46 0.093
11gb|AY095527.1| Drosophila melanogaster RE18568 full insert cDNA 46 0.093
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.093
13dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.093
14gb|AE005108.1| Halobacterium sp. NRC-1 section 139 of 170 of the... 46 0.093
15dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.093
16gb|AE003536.4| Drosophila melanogaster chromosome 3L, section 49... 46 0.093
17gb|BT001528.1| Drosophila melanogaster RE05346 full insert cDNA 46 0.093
18dbj|AB106899.1| Procambarus clarkii mRNA for allatostatin precur... 44 0.37
19emb|CR674960.1|CNS0FJRQ Tetraodon nigroviridis full-length cDNA 42 1.5
20emb|AL122058.19|HSJ813D12 Human DNA sequence from clone RP4-813D... 42 1.5
21gb|AC107421.6| Homo sapiens 3 BAC RP11-8J23 (Roswell Park Cancer... 42 1.5
22gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 5.7
23gb|AY523973.1|AY523972S2 Azospirillum brasilense plasmid 90 MDa,... 40 5.7
24ref|XM_544934.2| PREDICTED: Canis familiaris similar to serine/t... 40 5.7
25ref|XM_502169.1| Yarrowia lipolytica CLIB122, YALI0C23188g predi... 40 5.7
26emb|BX883043.1| Rattus norvegicus chromosome 20, major histocomp... 40 5.7
27emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.7
28emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.7
29gb|AC120734.5| Rattus norvegicus BAC CH230-220D1 (Children's Ho... 40 5.7
30ref|XM_686542.1| PREDICTED: Danio rerio similar to striated musc... 40 5.7
31ref|XM_687698.1| PREDICTED: Danio rerio similar to striated musc... 40 5.7
32emb|BX322540.5| Zebrafish DNA sequence from clone CH211-247B3 in... 40 5.7
33gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.7
34dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.7
35dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.7
36dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.7
37gb|AC114598.9| Mus musculus chromosome 8, clone RP23-301G13, com... 40 5.7
38emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right termin... 40 5.7
39gb|AY110940.1| Zea mays CL15516_1 mRNA sequence 40 5.7
40emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left termina... 40 5.7
41emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 5.7
42dbj|AB070954.1| Streptomyces avermitilis peptide-5 biosynthetic ... 40 5.7 
>gb|AC136969.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0048P17,
              complete sequence
          Length = 149883

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 117    gacaacgacgccaacatctccgccgg 142
              ||||||||||||||||||||||||||
Sbjct: 124550 gacaacgacgccaacatctccgccgg 124575
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>gb|AC150775.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNAa0048P17,complete sequence
          Length = 137127

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 117   gacaacgacgccaacatctccgccgg 142
             ||||||||||||||||||||||||||
Sbjct: 34668 gacaacgacgccaacatctccgccgg 34693
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 117    gacaacgacgccaacatctccgccgg 142
              ||||||||||||||||||||||||||
Sbjct: 958558 gacaacgacgccaacatctccgccgg 958583
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 117    gacaacgacgccaacatctccgccgg 142
              ||||||||||||||||||||||||||
Sbjct: 956980 gacaacgacgccaacatctccgccgg 957005
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>ref|XM_464870.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1515

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 400 cggagctgcaggggatgctggag 422
           |||||||||||||||||||||||
Sbjct: 224 cggagctgcaggggatgctggag 246



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 117 gacaacgacgccaacatctccgccgg 142
           ||||||||||| ||||||||||||||
Sbjct: 61  gacaacgacgctaacatctccgccgg 86
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>gb|AC093502.2| Drosophila melanogaster 3L BAC RP98-48C4 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 166249

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 379    cgtcgatgtccgacgagctgacg 401
              |||||||||||||||||||||||
Sbjct: 106657 cgtcgatgtccgacgagctgacg 106635
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>gb|AC010031.8| Drosophila melanogaster 3L BAC RP98-2M20 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 173509

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 379   cgtcgatgtccgacgagctgacg 401
             |||||||||||||||||||||||
Sbjct: 38666 cgtcgatgtccgacgagctgacg 38644
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>gb|AC104703.3| Drosophila melanogaster 3L BAC RP98-35M1 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185404

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 379    cgtcgatgtccgacgagctgacg 401
              |||||||||||||||||||||||
Sbjct: 155112 cgtcgatgtccgacgagctgacg 155090
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>ref|NM_168564.1| Drosophila melanogaster CG32137-RA, transcript variant A (CG32137),
            mRNA
          Length = 2602

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 379  cgtcgatgtccgacgagctgacg 401
            |||||||||||||||||||||||
Sbjct: 1237 cgtcgatgtccgacgagctgacg 1259
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>ref|NM_168563.1| Drosophila melanogaster CG32137-RB, transcript variant B (CG32137),
            mRNA
          Length = 3222

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 379  cgtcgatgtccgacgagctgacg 401
            |||||||||||||||||||||||
Sbjct: 1857 cgtcgatgtccgacgagctgacg 1879
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>gb|AY095527.1| Drosophila melanogaster RE18568 full insert cDNA
          Length = 2909

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 379  cgtcgatgtccgacgagctgacg 401
            |||||||||||||||||||||||
Sbjct: 1857 cgtcgatgtccgacgagctgacg 1879
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 400     cggagctgcaggggatgctggag 422
               |||||||||||||||||||||||
Sbjct: 8935994 cggagctgcaggggatgctggag 8935972



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 117     gacaacgacgccaacatctccgccgg 142
               ||||||||||| ||||||||||||||
Sbjct: 8936157 gacaacgacgctaacatctccgccgg 8936132
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>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0613F08
          Length = 142937

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 400    cggagctgcaggggatgctggag 422
              |||||||||||||||||||||||
Sbjct: 141012 cggagctgcaggggatgctggag 140990



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 117    gacaacgacgccaacatctccgccgg 142
              ||||||||||| ||||||||||||||
Sbjct: 141175 gacaacgacgctaacatctccgccgg 141150
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>gb|AE005108.1| Halobacterium sp. NRC-1 section 139 of 170 of the complete genome
          Length = 10914

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 368  ggacgcggcgccgtcgatgtccg 390
            |||||||||||||||||||||||
Sbjct: 8517 ggacgcggcgccgtcgatgtccg 8539
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>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0060K08
          Length = 159626

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 400  cggagctgcaggggatgctggag 422
            |||||||||||||||||||||||
Sbjct: 8603 cggagctgcaggggatgctggag 8581



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 117  gacaacgacgccaacatctccgccgg 142
            ||||||||||| ||||||||||||||
Sbjct: 8766 gacaacgacgctaacatctccgccgg 8741
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>gb|AE003536.4| Drosophila melanogaster chromosome 3L, section 49 of 83 of the complete
              sequence
          Length = 350428

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 379    cgtcgatgtccgacgagctgacg 401
              |||||||||||||||||||||||
Sbjct: 221454 cgtcgatgtccgacgagctgacg 221476
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>gb|BT001528.1| Drosophila melanogaster RE05346 full insert cDNA
          Length = 2288

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 379  cgtcgatgtccgacgagctgacg 401
            |||||||||||||||||||||||
Sbjct: 1236 cgtcgatgtccgacgagctgacg 1258
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>dbj|AB106899.1| Procambarus clarkii mRNA for allatostatin precursor protein,
           complete cds
          Length = 3323

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 50  ggcgaccgtggcggcgaccgagagcaggaggagc 83
           |||||| ||||||| ||| |||||||||||||||
Sbjct: 286 ggcgactgtggcggtgacggagagcaggaggagc 253
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>emb|CR674960.1|CNS0FJRQ Tetraodon nigroviridis full-length cDNA
          Length = 1143

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 401 ggagctgcaggggatgctggagagg 425
           ||||||||||||| |||||||||||
Sbjct: 629 ggagctgcaggggctgctggagagg 653
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>emb|AL122058.19|HSJ813D12 Human DNA sequence from clone RP4-813D12 on chromosome 20 Contains
            the 5' end of the BMP7 gene for bone morphogenetic
            protein 7 (osteogenic protein 1), two novel genes and a
            CpG island, complete sequence
          Length = 101473

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 401  ggagctgcaggggatgctgga 421
            |||||||||||||||||||||
Sbjct: 2379 ggagctgcaggggatgctgga 2359
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>gb|AC107421.6| Homo sapiens 3 BAC RP11-8J23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160396

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 151   acctcgctgctgccctccccc 171
             |||||||||||||||||||||
Sbjct: 73739 acctcgctgctgccctccccc 73759
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 299     cgatgtcgccacggcacccg 318
               ||||||||||||||||||||
Sbjct: 2080786 cgatgtcgccacggcacccg 2080767
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>gb|AY523973.1|AY523972S2 Azospirillum brasilense plasmid 90 MDa, partial sequence
          Length = 67651

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    gccgcaaggccctcgcgccggtgc 114
             ||||||||||||| ||||||||||
Sbjct: 31671 gccgcaaggccctggcgccggtgc 31694
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>ref|XM_544934.2| PREDICTED: Canis familiaris similar to serine/threonine protein
            phosphatase with EF-hand motifs 2 isoform a (LOC487812),
            mRNA
          Length = 2913

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 403  agctgcaggggatgctggag 422
            ||||||||||||||||||||
Sbjct: 1773 agctgcaggggatgctggag 1754
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>ref|XM_502169.1| Yarrowia lipolytica CLIB122, YALI0C23188g predicted mRNA
          Length = 789

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 407 gcaggggatgctggagaggc 426
           ||||||||||||||||||||
Sbjct: 571 gcaggggatgctggagaggc 590
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>emb|BX883043.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 2/11
          Length = 347664

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    ggagctgcaggggatgctgg 420
              ||||||||||||||||||||
Sbjct: 158074 ggagctgcaggggatgctgg 158093
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>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13
          Length = 346186

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  cgatgtcgccacggcacccg 318
            ||||||||||||||||||||
Sbjct: 4857 cgatgtcgccacggcacccg 4838
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>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14
          Length = 291050

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    cgatgtcgccacggcacccg 318
              ||||||||||||||||||||
Sbjct: 159912 cgatgtcgccacggcacccg 159893
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>gb|AC120734.5| Rattus norvegicus  BAC CH230-220D1 (Children's Hospital Oakland
            Research Institute Rat (BN/SsNHsd/MCW) BAC library)
            complete sequence
          Length = 232990

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  ggagctgcaggggatgctgg 420
            ||||||||||||||||||||
Sbjct: 8953 ggagctgcaggggatgctgg 8934
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>ref|XM_686542.1| PREDICTED: Danio rerio similar to striated muscle preferentially
            expressed protein (LOC563174), mRNA
          Length = 5275

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 402  gagctgcaggggatgctggagagg 425
            ||||||||||||||||||| ||||
Sbjct: 3799 gagctgcaggggatgctggggagg 3776
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>ref|XM_687698.1| PREDICTED: Danio rerio similar to striated muscle preferentially
            expressed protein (LOC564358), mRNA
          Length = 5137

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 402  gagctgcaggggatgctggagagg 425
            ||||||||||||||||||| ||||
Sbjct: 3661 gagctgcaggggatgctggggagg 3638
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>emb|BX322540.5| Zebrafish DNA sequence from clone CH211-247B3 in linkage group 19,
              complete sequence
          Length = 156150

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 402    gagctgcaggggatgctggagagg 425
              ||||||||||||||||||| ||||
Sbjct: 126043 gagctgcaggggatgctggggagg 126066
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     cctcaacacggaaggtgaag 338
               ||||||||||||||||||||
Sbjct: 3824601 cctcaacacggaaggtgaag 3824582
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 75      aggaggagcggccggagccg 94
               ||||||||||||||||||||
Sbjct: 7941302 aggaggagcggccggagccg 7941321
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 263     cctggtcgacccggccgccg 282
               ||||||||||||||||||||
Sbjct: 3713352 cctggtcgacccggccgccg 3713371
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    cctggtcgacccggccgccg 282
              ||||||||||||||||||||
Sbjct: 547798 cctggtcgacccggccgccg 547779
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>gb|AC114598.9| Mus musculus chromosome 8, clone RP23-301G13, complete sequence
          Length = 211410

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 403   agctgcaggggatgctggagaggc 426
             |||||||||||| |||||||||||
Sbjct: 94812 agctgcaggggaggctggagaggc 94835
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>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 259    ccgccctggtcgacccggccgccg 282
              ||||||||| ||||||||||||||
Sbjct: 152865 ccgccctggccgacccggccgccg 152842
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>gb|AY110940.1| Zea mays CL15516_1 mRNA sequence
          Length = 610

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 111 gtgcccgacaacgacgccaacatctccgccgg 142
           |||| ||||||||| || ||||||||||||||
Sbjct: 128 gtgctcgacaacgaggctaacatctccgccgg 159
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>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 259    ccgccctggtcgacccggccgccg 282
              ||||||||| ||||||||||||||
Sbjct: 152865 ccgccctggccgacccggccgccg 152842
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 407     gcaggggatgctggagaggc 426
               ||||||||||||||||||||
Sbjct: 3110555 gcaggggatgctggagaggc 3110574
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>dbj|AB070954.1| Streptomyces avermitilis peptide-5 biosynthetic gene cluster
          Length = 13123

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   aggaggagcggccggagccg 94
            ||||||||||||||||||||
Sbjct: 2558 aggaggagcggccggagccg 2539


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,877,462
Number of Sequences: 3902068
Number of extensions: 2877462
Number of successful extensions: 55492
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54606
Number of HSP's gapped (non-prelim): 886
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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