ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast41d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MBB1A_HUMAN (Q9BQG0) Myb-binding protein 1A 28 6.9
2DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta... 27 9.0
3GLPK1_SULAC (Q4J9R1) Glycerol kinase 1 (EC 2.7.1.30) (ATP:glycer... 27 9.0
4YO13_CAEEL (P34669) Hypothetical protein ZK686.3 in chromosome III 27 9.0

>MBB1A_HUMAN (Q9BQG0) Myb-binding protein 1A|
          Length = 1328

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 165  SSLQQLASKKRKDHGYLPSLAWYCTKEKKRQRTRKG 58
            S+ Q   SKKRK  G+LP      TK++K++++  G
Sbjct: 1159 SATQSPISKKRKKKGFLPE-----TKKRKKRKSEDG 1189



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>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter|
           protein containing PH domain, PTB domain and leucine
           zipper motif 2)
          Length = 662

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -2

Query: 159 LQQLASKKRKDHGYLPSLAWYCTKEKKRQRTRKGMMD 49
           ++++A+ +RK H  L SL +YC     + R R  MM+
Sbjct: 164 VKEVAAARRKQH--LSSLQYYCALNALQYRKRAAMME 198



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>GLPK1_SULAC (Q4J9R1) Glycerol kinase 1 (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase 1) (Glycerokinase 1) (GK 1)
          Length = 498

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -2

Query: 168 YSSLQQLASKKRKDHGYLPSLAWYCTKEKKRQRTRKG 58
           +SSL++L SK   D  ++PSL     +E +R+R  KG
Sbjct: 448 WSSLEELKSKWAVDREFIPSL-----QEDRRERLYKG 479



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>YO13_CAEEL (P34669) Hypothetical protein ZK686.3 in chromosome III|
          Length = 331

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
 Frame = +2

Query: 74  CLFFSFVQ--YQAKLGRYPWSFLF 139
           C+FFSF+   +++K   YP+SFLF
Sbjct: 307 CVFFSFLLSVFRSKYRGYPYSFLF 330


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,750,699
Number of Sequences: 219361
Number of extensions: 607191
Number of successful extensions: 1828
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1828
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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