ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast41d06 |
|---|---|
| Clone Library Name | barley_pub |
>TALA_SHIFL (Q83QM8) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 38.9 bits (89), Expect = 0.005 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = +1 Query: 196 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 375 + ELD + F+ +V D+ + + P AT + SLLL AGL ++++ ID A+A G Sbjct: 1 MNELDGIKQFTTVVADSCDIESIRHYHPQDATANPSLLLKAAGL--SQYEHLIDDAIAWG 58 Query: 376 ECN 384 + N Sbjct: 59 KKN 61
>TALA_ECOLI (P0A867) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 38.1 bits (87), Expect = 0.009 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = +1 Query: 196 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 375 + ELD + F+ +V D+ + + P AT + SLLL AGL ++++ ID A+A G Sbjct: 1 MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL--SQYEHLIDDAIAWG 58 Query: 376 ECN 384 + N Sbjct: 59 KKN 61
>TALA_ECOL6 (P0A868) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 38.1 bits (87), Expect = 0.009 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = +1 Query: 196 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 375 + ELD + F+ +V D+ + + P AT + SLLL AGL ++++ ID A+A G Sbjct: 1 MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL--SQYEHLIDDAIAWG 58 Query: 376 ECN 384 + N Sbjct: 59 KKN 61
>TALA_ECO57 (P0A869) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 38.1 bits (87), Expect = 0.009 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = +1 Query: 196 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 375 + ELD + F+ +V D+ + + P AT + SLLL AGL ++++ ID A+A G Sbjct: 1 MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL--SQYEHLIDDAIAWG 58 Query: 376 ECN 384 + N Sbjct: 59 KKN 61
>TAL2_SHISS (Q3YZ89) Transaldolase 2 (EC 2.2.1.2)| Length = 316 Score = 38.1 bits (87), Expect = 0.009 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = +1 Query: 196 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 375 + ELD + F+ +V D+ + + P AT + SLLL AGL ++++ ID A+A G Sbjct: 1 MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL--SQYEHLIDDAIAWG 58 Query: 376 ECN 384 + N Sbjct: 59 KKN 61
>TAL_RALSO (Q8Y014) Transaldolase (EC 2.2.1.2)| Length = 319 Score = 35.0 bits (79), Expect = 0.077 Identities = 18/66 (27%), Positives = 36/66 (54%) Frame = +1 Query: 196 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 375 +T+LD + F+ +V DT F +AP AT + SL+L + +++ ++ A+ D Sbjct: 1 MTQLDQLKQFTTVVADTGDFQAMRAYAPHDATTNPSLIL--KAVQKAEYRPLLEQAVRDA 58 Query: 376 ECNTME 393 +++E Sbjct: 59 RSDSVE 64
>TALA_SALTY (Q8ZN83) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 32.7 bits (73), Expect = 0.38 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = +1 Query: 196 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 375 + +LD + F+ +V D+ + + P AT + SLLL AGL ++ I+ A+A G Sbjct: 1 MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGL--EQYGHLIEDAIAWG 58 Query: 376 E 378 + Sbjct: 59 K 59
>TALA_SALTI (Q8Z4T0) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 32.7 bits (73), Expect = 0.38 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = +1 Query: 196 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 375 + +LD + F+ +V D+ + + P AT + SLLL AGL ++ I+ A+A G Sbjct: 1 MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGL--EQYGHLIEDAIAWG 58 Query: 376 E 378 + Sbjct: 59 K 59
>TAL2_SALPA (Q5PCU4) Transaldolase 2 (EC 2.2.1.2)| Length = 316 Score = 32.7 bits (73), Expect = 0.38 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = +1 Query: 196 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 375 + +LD + F+ +V D+ + + P AT + SLLL AGL ++ I+ A+A G Sbjct: 1 MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGL--EQYGHLIEDAIAWG 58 Query: 376 E 378 + Sbjct: 59 K 59
>TAL2_SALCH (Q57LN7) Transaldolase 2 (EC 2.2.1.2)| Length = 316 Score = 32.7 bits (73), Expect = 0.38 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = +1 Query: 196 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 375 + +LD + F+ +V D+ + + P AT + SLLL AGL ++ I+ A+A G Sbjct: 1 MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGL--EQYGHLIEDAIAWG 58 Query: 376 E 378 + Sbjct: 59 K 59
>YMD5_CAEEL (P34459) Hypothetical protein F54H12.5| Length = 880 Score = 30.8 bits (68), Expect = 1.5 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -2 Query: 344 LNLVSGSPAIPSNSEELTVAAVGANFSKSSKTTVSGTISLKLETTSSS 201 L+ + +P P+NS++ +G N S +S TT TIS T SS Sbjct: 331 LDFIKHAPTSPNNSKDPAKRFIGFNSSGASPTTPETTISSSDSTNESS 378
>RTBDN_SPETR (Q5DRQ5) Retbindin precursor| Length = 254 Score = 30.4 bits (67), Expect = 1.9 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +3 Query: 6 PSSTHGALHFRTHLISLPPRPSPGRQV-ELVTKLG*ARGFQPPEAGSGGTG 155 P + G+ H ISL PRP PGR E +++ RG +AG G+G Sbjct: 197 PVAAPGSRHCLNISISLLPRPRPGRWARETISQRSRRRGTGILDAGGSGSG 247
>TAL_COLP3 (Q47WR3) Transaldolase (EC 2.2.1.2)| Length = 320 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +1 Query: 199 TELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPD 333 ++L + + +V DT + KF P AT + SLLL A LP+ Sbjct: 6 SQLAQLKQMTTVVADTGDIEAIAKFQPQDATTNPSLLLKAASLPN 50
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 29.6 bits (65), Expect = 3.2 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 4/74 (5%) Frame = -2 Query: 404 SPGFSIVLHSPSANAVSMALLNLVSGSPAIPSNSEELTVA----AVGANFSKSSKTTVSG 237 SP S SPS++A S + + + S + PS+S + A A ++ S SS ++ + Sbjct: 477 SPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSSSASSSSASSSSASSAAT 536 Query: 236 TISLKLETTSSSVT 195 T + + TT+++ T Sbjct: 537 TAATTIATTAATTT 550 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/61 (29%), Positives = 36/61 (59%) Frame = -2 Query: 377 SPSANAVSMALLNLVSGSPAIPSNSEELTVAAVGANFSKSSKTTVSGTISLKLETTSSSV 198 SPS++A S + + + S + PS+S + A+ ++ + S+ TT + TI+ TT+++ Sbjct: 496 SPSSSASSSSAPSSSASSSSAPSSSASSSSAS--SSSASSAATTAATTIATTAATTTATT 553 Query: 197 T 195 T Sbjct: 554 T 554
>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4| (KAISO-like zinc finger protein 1) (KAISO-L1) Length = 1013 Score = 29.3 bits (64), Expect = 4.2 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +1 Query: 4 IPAPPMALSISAPTSSPFLPAPRQAGRW 87 +P P ++ S P F P PR AG W Sbjct: 186 VPPTPAPMATSQPEEDSFGPGPRPAGEW 213
>DEC1_DROER (Q23933) Defective chorion-1 protein precursor (Fragments)| Length = 557 Score = 29.3 bits (64), Expect = 4.2 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +1 Query: 1 PIPAPPMALSISAPTSSPFLPAPRQAGRWSSLPSSAKPAV 120 P+PAP AP ++P PAP + +P +A+PA+ Sbjct: 181 PVPAPA-----PAPAATPLAPAPAADPPAAPVPDAAQPAI 215
>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = +1 Query: 7 PAPPMALSISAPTSSPFLPAPRQAGRWSSLPSSAKP 114 P PP AL SAP+ P P P AG + P P Sbjct: 341 PPPPPALPSSAPSGPPPPPPPSMAGSTAPPPPPPPP 376
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +1 Query: 1 PIPAPPMALSISAPTSSPFLPAPRQAGRWSSLPSSAKPAV 120 P P PP +S+ P S+P +PA + LP+S+ P+V Sbjct: 1705 PTPPPP-PMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSV 1743
>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2| Length = 1516 Score = 28.9 bits (63), Expect = 5.5 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 1 PIPAPPMALSISAPTSSPFLPAPRQAGRWS----SLPSSAKPA 117 P+ AP +S+ AP+ P PR GR + S P +++P+ Sbjct: 733 PLAAPAAQVSVPAPSGEPQASTPRATGRGARKAGSEPETSRPS 775
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = +1 Query: 7 PAPPMALSISAPTSSPFL--PAPRQAGRWSSLPSSAKP 114 PAPP + S +P+S+P PAP S++P S+ P Sbjct: 218 PAPPKSTSPVSPSSAPMTSPPAPMAPKSSSTIPPSSAP 255
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 28.5 bits (62), Expect = 7.2 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +3 Query: 51 SLPPRPSPGRQVELVTKLG*ARGFQPPE-AGSGGTGR 158 S+PPRP+PG + + G + G +P G+ G GR Sbjct: 249 SMPPRPNPGAMPQRTPRPGPSAGGRPGRPGGAPGAGR 285
>MILK1_MOUSE (Q8BGT6) Molecule interacting with Rab13 (MIRab13) (MICAL-like| protein 1) Length = 870 Score = 28.5 bits (62), Expect = 7.2 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +1 Query: 1 PIPAPPMALSISAPTSSPFLPAPRQAGRWSSLPSSAKP 114 P+P+P +A + +P+ +P +P+P A PS A P Sbjct: 436 PVPSPSLAPPVPSPSPAPPVPSPAPA------PSEATP 467
>V33P_ADE02 (P24939) 33 kDa phosphoprotein| Length = 228 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Frame = +1 Query: 1 PIPAP------PMALSISAPTSSPFLPAPRQAGRWSSLPSSAKP 114 P PAP P + SAP + P LP R RW + + A P Sbjct: 63 PSPAPQKLATVPSIATTSAPQAPPALPVRRPNRRWDTTGTRAAP 106
>TOLB_PHOPR (Q6LP47) Protein tolB precursor| Length = 449 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/67 (23%), Positives = 29/67 (43%) Frame = -2 Query: 398 GFSIVLHSPSANAVSMALLNLVSGSPAIPSNSEELTVAAVGANFSKSSKTTVSGTISLKL 219 GF+I AV + + SP+I N + ++V ++ S ++ G +L Sbjct: 374 GFNIAKQDLKTGAVQILTKTFLDESPSIAPNGGMVIYSSVNNKSNELSLVSIDGRFKARL 433 Query: 218 ETTSSSV 198 TT+ V Sbjct: 434 PTTNGRV 440
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 28.5 bits (62), Expect = 7.2 Identities = 27/131 (20%), Positives = 43/131 (32%), Gaps = 2/131 (1%) Frame = +1 Query: 1 PIPAPPMALSI--SAPTSSPFLPAPRQAGRWSSLPSSAKPAVFSXXXXXXXXXXXXXXXX 174 P+P P + +I SAP+S+PF SS SS+ P Sbjct: 808 PVPTPSSSSNITSSAPSSTPFS---------SSTESSSVPVPTPSSSTTESSSAPVSSST 858 Query: 175 XXXXXXVVTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAI 354 V S+ + P ++ F + T TV+ S +T S Sbjct: 859 TESSVAPVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYPGSQTETSVSSTT 918 Query: 355 DTALADGECNT 387 +T + + T Sbjct: 919 ETTIVPTKTTT 929
>MOT8_HUMAN (P36021) Monocarboxylate transporter 8 (MCT 8) (X-linked| PEST-containing transporter) (MCT 7) Length = 613 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +3 Query: 60 PRPSPGRQVELVTKLG*ARGFQPPEAGSG 146 P P+P V G ARGFQPPE G G Sbjct: 151 PEPTP-----TVETRGTARGFQPPEGGFG 174
>MOT8_MOUSE (O70324) Monocarboxylate transporter 8 (MCT 8) (X-linked| PEST-containing transporter) Length = 565 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +3 Query: 60 PRPSPGRQVELVTKLG*ARGFQPPEAGSG 146 P P+P V G ARGFQPPE G G Sbjct: 103 PEPTP-----TVETRGTARGFQPPEGGFG 126
>EXTL3_MOUSE (Q9WVL6) Exostosin-like 3 (EC 2.4.1.-) (Multiple exostosis-like| protein 3) Length = 918 Score = 28.5 bits (62), Expect = 7.2 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = +3 Query: 9 SSTHGALHFRTHLISLPPRPSPGRQVELVTKLG*ARGFQPPEAGSGGTGRRRQRAL 176 +S G H H P PS + LG GF+P G+GG+G+ Q AL Sbjct: 604 NSAPGRFHLFPHTPFDPVLPSEAKF------LGSGTGFRPIGGGAGGSGKEFQAAL 653
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 28.1 bits (61), Expect = 9.4 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 Query: 1 PIPAPPMALSISAPTSSPFLPAPRQAGRWSSLPSSAKP 114 P PAPP S + P+ +P PAP S P S P Sbjct: 71 PSPAPPSPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 108
>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)| (Protein kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1243 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 13/51 (25%) Frame = +1 Query: 1 PIPAPPMALSISA-----PTSSPF--------LPAPRQAGRWSSLPSSAKP 114 P P P++ +S+ PTSSP P P WSSLP+++ P Sbjct: 840 PSPFSPISSQVSSNPSPHPTSSPLPFSSSTPEFPVPLSQCPWSSLPTTSPP 890
>YK02_SCHPO (Q9HDY9) Hypothetical serine/threonine-rich protein P11E10.02c| precursor Length = 1082 Score = 28.1 bits (61), Expect = 9.4 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 10/83 (12%) Frame = -2 Query: 413 DIRSPGFSIVLHSPSANAVSMALLNLVSGSPAIPSNSEELTVAAVGANF----------S 264 DI S S V++SP+ AVS + L + P S +V++ A+ S Sbjct: 134 DISSSTSSSVINSPTGTAVSSQISTLSMSPSSTPVFSPSASVSSKVASSVSYVSSEPSDS 193 Query: 263 KSSKTTVSGTISLKLETTSSSVT 195 SS TV T S+ SSS T Sbjct: 194 SSSTNTVILTTSVNSPAVSSSET 216
>HEX9_ADE41 (P32539) Hexon-associated protein (Protein IX) (pIX)| Length = 133 Score = 28.1 bits (61), Expect = 9.4 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = -2 Query: 335 VSGSPAIPSNSEELTVAAVGANFSKSSKTTVSGTIS 228 V G P P+NS LT A VG++ ++ S S Sbjct: 40 VDGRPVAPANSATLTYATVGSSVDTAAAAAASAAAS 75
>ATS20_HUMAN (P59510) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1911 Score = 28.1 bits (61), Expect = 9.4 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +1 Query: 364 LADGECNTMEKPGDRMSCYLT 426 L D EC+ +P DR SC LT Sbjct: 1113 LEDTECHEASRPSDRQSCVLT 1133
>YAWG_SCHPO (Q10190) Hypothetical GTP-binding protein C3F10.16c in chromosome I| Length = 616 Score = 28.1 bits (61), Expect = 9.4 Identities = 13/47 (27%), Positives = 21/47 (44%) Frame = +1 Query: 262 FEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADGECNTMEKPG 402 FEKFA T + + G+ G P+ S I+ + + + PG Sbjct: 288 FEKFASTLPDGKTKMTFGLVGYPNVGKSSTINALVGSKKVSVSSTPG 334 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.130 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,795,529 Number of Sequences: 219361 Number of extensions: 925531 Number of successful extensions: 3776 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3508 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3748 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits)
