ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast41d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK058325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 3e-66
2ref|XM_480152.1| Oryza sativa (japonica cultivar-group), mRNA 252 8e-64
3dbj|AK101430.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 8e-64
4gb|AY106050.1| Zea mays PCO102595 mRNA sequence 230 3e-57
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
6dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
7gb|AC121930.3| Mus musculus BAC clone RP24-205C1 from chromosome... 46 0.094
8gb|AC147230.3| Mus musculus BAC clone RP23-239N12 from 15, compl... 46 0.094
9dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.5
10emb|AJ516010.1|PTO516010 Peru tomato virus gene for polyprotein,... 42 1.5
11gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 5.8
12gb|AC148004.3| Mus musculus BAC clone RP23-352J18 from chromosom... 40 5.8
13gb|BC116483.1| Danio rerio cDNA clone IMAGE:7280380, partial cds 40 5.8
14gb|AC117191.4| Mus musculus BAC clone RP23-58O15 from 18, comple... 40 5.8
15gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, compl... 40 5.8
16emb|AL136320.7| Human DNA sequence from clone RP3-323N1 on chrom... 40 5.8
17emb|Z98762.1|SPAC4A8 S.pombe chromosome I cosmid c4A8 40 5.8
18emb|BX936431.7| Zebrafish DNA sequence from clone CH211-208A5 in... 40 5.8
19gb|BC097210.1| Danio rerio dedicator of cytokinesis 7, mRNA (cDN... 40 5.8
20gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome... 40 5.8
21gb|AE005979.1| Caulobacter crescentus CB15 section 305 of 359 of... 40 5.8
22gb|AF295063.1|AF314199S2 Homo sapiens neuroplastoma apoptosis-re... 40 5.8
23ref|NM_001019257.1| Schizosaccharomyces pombe 972h- translation ... 40 5.8
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
25gb|BC077110.1| Danio rerio dedicator of cytokinesis 7, mRNA (cDN... 40 5.8
26gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence 40 5.8
27gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.8
28dbj|AP005554.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
29dbj|AK098947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
30dbj|AK072043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
31dbj|AK068798.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
32dbj|AK059171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
33emb|AL162872.4|CNS01RI5 Human chromosome 14 DNA sequence BAC R-7... 40 5.8
34gb|AC150714.3| Equus caballus clone CH241-187O21, complete sequence 40 5.8
35emb|CT030164.9| Mouse DNA sequence from clone RP23-311P8 on chro... 40 5.8
36gb|DP000020.1| Equus caballus target 1 genomic scaffold 40 5.8
37dbj|D89140.1| Schizosaccharomyces pombe mRNA, partial cds, clone... 40 5.8 
>dbj|AK058325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B10, full
           insert sequence
          Length = 1618

 Score =  260 bits (131), Expect = 3e-66
 Identities = 267/312 (85%), Gaps = 3/312 (0%)
 Strand = Plus / Plus

                                                                       
Query: 124 agcctccggaggccggttctggtggcacggg---ccgccgccggcaacgcgccctcttcc 180
           |||||||||||||||||||| | ||| || |   |||||| ||||||||| || ||||||
Sbjct: 180 agcctccggaggccggttcttgcggcccgtgtagccgccggcggcaacgcaccgtcttcc 239

                                                                       
Query: 181 cccgcgggcgcggtcgtaactgagctcgacgtggtctccagcttcagcgagatcgtgccg 240
            ||| || || ||| || ||||||||||| |  ||  |||||||||||||||||||||||
Sbjct: 240 tccgtggacgaggtggtcactgagctcgatgccgtggccagcttcagcgagatcgtgccg 299

                                                                       
Query: 241 gacacagtcgtcttcgatgattttgagaagtttgcgccgacggcggccaccgtgagctct 300
           || || ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| 
Sbjct: 300 gataccgtcgtgttcgatgacttcgagaagtttgcgccgaccgccgccacggtgagctcg 359

                                                                       
Query: 301 tcgctgttgcttgggatcgcagggctcccggataccaagttcaagagtgccattgacacc 360
           |||||| |||| || ||||| || ||||||||||| |||||||||||||| || || || 
Sbjct: 360 tcgctgctgctcggtatcgctggcctcccggatacaaagttcaagagtgctatagataca 419

                                                                       
Query: 361 gcattggcagatggtgaatgtaacacaatggagaagcccggngaccggatgtcctgttac 420
           ||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| |
Sbjct: 420 gcattggcagacggtgaatgtaacacaatggagaagcccgaggaccggatgtcctgtttc 479

                       
Query: 421 cttaccaaggcc 432
           || |||||||||
Sbjct: 480 ctaaccaaggcc 491
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>ref|XM_480152.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1618

 Score =  252 bits (127), Expect = 8e-64
 Identities = 266/312 (85%), Gaps = 3/312 (0%)
 Strand = Plus / Plus

                                                                       
Query: 124 agcctccggaggccggttctggtggcacggg---ccgccgccggcaacgcgccctcttcc 180
           |||||||||||||||||||| | ||| || |   |||||| ||||||||| || ||||||
Sbjct: 180 agcctccggaggccggttcttgcggcccgtgtagccgccggcggcaacgcaccgtcttcc 239

                                                                       
Query: 181 cccgcgggcgcggtcgtaactgagctcgacgtggtctccagcttcagcgagatcgtgccg 240
            ||| || || ||| || ||||||||||| |  ||  |||||||||||||||||||||||
Sbjct: 240 tccgtggacgaggtggtcactgagctcgatgccgtggccagcttcagcgagatcgtgccg 299

                                                                       
Query: 241 gacacagtcgtcttcgatgattttgagaagtttgcgccgacggcggccaccgtgagctct 300
           || || ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| 
Sbjct: 300 gataccgtcgtgttcgatgacttcgagaagtttgcgccgaccgccgccacggtgagctcg 359

                                                                       
Query: 301 tcgctgttgcttgggatcgcagggctcccggataccaagttcaagagtgccattgacacc 360
           |||||| |||| || ||||| || ||||||||||| |||||||||||||| || || || 
Sbjct: 360 tcgctgctgctcggtatcgctggcctcccggatacaaagttcaagagtgctatagataca 419

                                                                       
Query: 361 gcattggcagatggtgaatgtaacacaatggagaagcccggngaccggatgtcctgttac 420
           || |||||||| ||||||||||||||||||||||||||||  |||||||||||||||| |
Sbjct: 420 gcgttggcagacggtgaatgtaacacaatggagaagcccgaggaccggatgtcctgtttc 479

                       
Query: 421 cttaccaaggcc 432
           || |||||||||
Sbjct: 480 ctaaccaaggcc 491
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>dbj|AK101430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038K01, full
           insert sequence
          Length = 2631

 Score =  252 bits (127), Expect = 8e-64
 Identities = 266/312 (85%), Gaps = 3/312 (0%)
 Strand = Plus / Plus

                                                                       
Query: 124 agcctccggaggccggttctggtggcacggg---ccgccgccggcaacgcgccctcttcc 180
           |||||||||||||||||||| | ||| || |   |||||| ||||||||| || ||||||
Sbjct: 153 agcctccggaggccggttcttgcggcccgtgtagccgccggcggcaacgcaccgtcttcc 212

                                                                       
Query: 181 cccgcgggcgcggtcgtaactgagctcgacgtggtctccagcttcagcgagatcgtgccg 240
            ||| || || ||| || ||||||||||| |  ||  |||||||||||||||||||||||
Sbjct: 213 tccgtggacgaggtggtcactgagctcgatgccgtggccagcttcagcgagatcgtgccg 272

                                                                       
Query: 241 gacacagtcgtcttcgatgattttgagaagtttgcgccgacggcggccaccgtgagctct 300
           || || ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| 
Sbjct: 273 gataccgtcgtgttcgatgacttcgagaagtttgcgccgaccgccgccacggtgagctcg 332

                                                                       
Query: 301 tcgctgttgcttgggatcgcagggctcccggataccaagttcaagagtgccattgacacc 360
           |||||| |||| || ||||| || ||||||||||| |||||||||||||| || || || 
Sbjct: 333 tcgctgctgctcggtatcgctggcctcccggatacaaagttcaagagtgctatagataca 392

                                                                       
Query: 361 gcattggcagatggtgaatgtaacacaatggagaagcccggngaccggatgtcctgttac 420
           || |||||||| ||||||||||||||||||||||||||||  |||||||||||||||| |
Sbjct: 393 gcgttggcagacggtgaatgtaacacaatggagaagcccgaggaccggatgtcctgtttc 452

                       
Query: 421 cttaccaaggcc 432
           || |||||||||
Sbjct: 453 ctaaccaaggcc 464
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>gb|AY106050.1| Zea mays PCO102595 mRNA sequence
          Length = 1415

 Score =  230 bits (116), Expect = 3e-57
 Identities = 271/323 (83%)
 Strand = Plus / Plus

                                                                       
Query: 109 aagcccgcggttttcagcctccggaggccggttctggtggcacgggccgccgccggcaac 168
           |||||||||  ||||||||| ||||||||   |||||  || ||||||||||| ||||||
Sbjct: 136 aagcccgcgactttcagcctacggaggccacatctggccgcgcgggccgccgctggcaac 195

                                                                       
Query: 169 gcgccctcttcccccgcgggcgcggtcgtaactgagctcgacgtggtctccagcttcagc 228
           || ||| | ||||| |   ||| |||||| ||||||||||||| |||| || ||||||||
Sbjct: 196 gcacccacgtccccggtccgcgaggtcgtcactgagctcgacgcggtcgccggcttcagc 255

                                                                       
Query: 229 gagatcgtgccggacacagtcgtcttcgatgattttgagaagtttgcgccgacggcggcc 288
           ||||||||||||||||| ||||| ||||||||||| |||| ||| || || |||||||||
Sbjct: 256 gagatcgtgccggacaccgtcgtgttcgatgatttcgagaggttcgcacccacggcggcc 315

                                                                       
Query: 289 accgtgagctcttcgctgttgcttgggatcgcagggctcccggataccaagttcaagagt 348
           || |||||||| |||||| ||||||||||| | |||||||| || || ||||||||||||
Sbjct: 316 acagtgagctcgtcgctgctgcttgggatcactgggctcccagacactaagttcaagagt 375

                                                                       
Query: 349 gccattgacaccgcattggcagatggtgaatgtaacacaatggagaagcccggngaccgg 408
           || || || || ||| ||||||||||||| || ||| || |||||||| | |  ||| ||
Sbjct: 376 gcgatagatactgcactggcagatggtgagtgcaacgcactggagaaggctgaggacagg 435

                                  
Query: 409 atgtcctgttaccttaccaaggc 431
           |||||||||||||| ||||||||
Sbjct: 436 atgtcctgttacctcaccaaggc 458
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                           
Query: 364     ttggcagatggtgaatgtaacacaatggagaagcccggngaccggatgtcctgttacctt 423
               |||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||| 
Sbjct: 3125067 ttggcagacggtgaatgtaacacaatggagaagcccgaggaccggatgtcctgtttccta 3125008

                      
Query: 424     accaagg 430
               |||||||
Sbjct: 3125007 accaagg 3125001



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                           
Query: 270     gtttgcgccgacggcggccaccgtgagctcttcgctgttgcttgggatcgcagggctccc 329
               |||||||||||| || ||||| |||||||| |||||| |||| || ||||| || |||||
Sbjct: 3125250 gtttgcgccgaccgccgccacggtgagctcgtcgctgctgctcggtatcgctggcctccc 3125191

                               
Query: 330     ggataccaagttcaag 345
               |||||| |||||||||
Sbjct: 3125190 ggatacaaagttcaag 3125175



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                     
Query: 218     ccagcttcagcgagatcgtgccggacacagtcgtcttcgatgattttgagaagt 271
               ||||||||||||||||||||||||| || ||||| |||||||| || |||||||
Sbjct: 3125409 ccagcttcagcgagatcgtgccggataccgtcgtgttcgatgacttcgagaagt 3125356



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 124     agcctccggaggccggttct 143
               ||||||||||||||||||||
Sbjct: 3125595 agcctccggaggccggttct 3125576
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>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1066_B03
          Length = 115339

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                         
Query: 364   ttggcagatggtgaatgtaacacaatggagaagcccggngaccggatgtcctgttacctt 423
             |||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||| 
Sbjct: 84551 ttggcagacggtgaatgtaacacaatggagaagcccgaggaccggatgtcctgtttccta 84492

                    
Query: 424   accaagg 430
             |||||||
Sbjct: 84491 accaagg 84485



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                         
Query: 270   gtttgcgccgacggcggccaccgtgagctcttcgctgttgcttgggatcgcagggctccc 329
             |||||||||||| || ||||| |||||||| |||||| |||| || ||||| || |||||
Sbjct: 84734 gtttgcgccgaccgccgccacggtgagctcgtcgctgctgctcggtatcgctggcctccc 84675

                             
Query: 330   ggataccaagttcaag 345
             |||||| |||||||||
Sbjct: 84674 ggatacaaagttcaag 84659



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 218   ccagcttcagcgagatcgtgccggacacagtcgtcttcgatgattttgagaagt 271
             ||||||||||||||||||||||||| || ||||| |||||||| || |||||||
Sbjct: 84893 ccagcttcagcgagatcgtgccggataccgtcgtgttcgatgacttcgagaagt 84840



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   agcctccggaggccggttct 143
             ||||||||||||||||||||
Sbjct: 85079 agcctccggaggccggttct 85060
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>gb|AC121930.3| Mus musculus BAC clone RP24-205C1 from chromosome 15, complete sequence
          Length = 148390

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 44     cctcatctcccttcctccccgcc 66
              |||||||||||||||||||||||
Sbjct: 113193 cctcatctcccttcctccccgcc 113171
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>gb|AC147230.3| Mus musculus BAC clone RP23-239N12 from 15, complete sequence
          Length = 255976

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 44    cctcatctcccttcctccccgcc 66
             |||||||||||||||||||||||
Sbjct: 74972 cctcatctcccttcctccccgcc 74994
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 143     tggtggcacgggccgccgccg 163
               |||||||||||||||||||||
Sbjct: 1274519 tggtggcacgggccgccgccg 1274499
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>emb|AJ516010.1|PTO516010 Peru tomato virus gene for polyprotein, genomic RNA, isolate PPK11
          Length = 9892

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 338  agttcaagagtgccattgaca 358
            |||||||||||||||||||||
Sbjct: 5367 agttcaagagtgccattgaca 5387
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 155     ccgccgccggcaacgcgccc 174
               ||||||||||||||||||||
Sbjct: 2528164 ccgccgccggcaacgcgccc 2528183
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>gb|AC148004.3| Mus musculus BAC clone RP23-352J18 from chromosome 18, complete sequence
          Length = 206275

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    agatggtgaatgtaacacaa 388
              ||||||||||||||||||||
Sbjct: 129739 agatggtgaatgtaacacaa 129758
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>gb|BC116483.1| Danio rerio cDNA clone IMAGE:7280380, partial cds
          Length = 1150

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 gccaccgtgagctcttcgct 305
           ||||||||||||||||||||
Sbjct: 714 gccaccgtgagctcttcgct 733
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>gb|AC117191.4| Mus musculus BAC clone RP23-58O15 from 18, complete sequence
          Length = 149461

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   agatggtgaatgtaacacaa 388
             ||||||||||||||||||||
Sbjct: 54893 agatggtgaatgtaacacaa 54912
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>gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, complete sequence
          Length = 223130

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    acccacctcatctcccttcctccc 62
             ||||| ||||||||||||||||||
Sbjct: 11284 acccatctcatctcccttcctccc 11261
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>emb|AL136320.7| Human DNA sequence from clone RP3-323N1 on chromosome 10 Contains the
             5' end of the CUGBP2 gene for CUG triplet repeat RNA
             binding protein 2, a novel gene and a CpG island, complete
             sequence
          Length = 55550

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   aatgtaacacaatggagaag 396
             ||||||||||||||||||||
Sbjct: 26138 aatgtaacacaatggagaag 26119
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>emb|Z98762.1|SPAC4A8 S.pombe chromosome I cosmid c4A8
          Length = 43895

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   gcattggcagatggtgaatg 380
             ||||||||||||||||||||
Sbjct: 42473 gcattggcagatggtgaatg 42454
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>emb|BX936431.7| Zebrafish DNA sequence from clone CH211-208A5 in linkage group 6,
             complete sequence
          Length = 127584

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   gccaccgtgagctcttcgct 305
             ||||||||||||||||||||
Sbjct: 55223 gccaccgtgagctcttcgct 55242
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>gb|BC097210.1| Danio rerio dedicator of cytokinesis 7, mRNA (cDNA clone
           IMAGE:7427102), partial cds
          Length = 906

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 gccaccgtgagctcttcgct 305
           ||||||||||||||||||||
Sbjct: 710 gccaccgtgagctcttcgct 729
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>gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome 12, complete sequence
          Length = 201550

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 39     acccacctcatctcccttcctccc 62
              ||||| ||||||||||||||||||
Sbjct: 172374 acccatctcatctcccttcctccc 172397
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>gb|AE005979.1| Caulobacter crescentus CB15 section 305 of 359 of the complete genome
          Length = 11597

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  cttcagcgagatcgtgccgg 241
            ||||||||||||||||||||
Sbjct: 6854 cttcagcgagatcgtgccgg 6835
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>gb|AF295063.1|AF314199S2 Homo sapiens neuroplastoma apoptosis-related RNA-binding protein
             (CUGBP2) gene, exons 1c and 2
          Length = 55550

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   aatgtaacacaatggagaag 396
             ||||||||||||||||||||
Sbjct: 26138 aatgtaacacaatggagaag 26119
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>ref|NM_001019257.1| Schizosaccharomyces pombe 972h- translation initation factor 3 (eif3
            subunit) (SPAC1E11.01c), partial mRNA
          Length = 2757

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  gcattggcagatggtgaatg 380
            ||||||||||||||||||||
Sbjct: 2260 gcattggcagatggtgaatg 2279
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 11       ctccacccatggcgctctcc 30
                ||||||||||||||||||||
Sbjct: 10276055 ctccacccatggcgctctcc 10276074
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>gb|BC077110.1| Danio rerio dedicator of cytokinesis 7, mRNA (cDNA clone
           IMAGE:7145816), partial cds
          Length = 1165

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 gccaccgtgagctcttcgct 305
           ||||||||||||||||||||
Sbjct: 718 gccaccgtgagctcttcgct 737
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>gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence
          Length = 171209

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 360  cgcattggcagatggtgaatgtaa 383
            |||||||||| |||||||||||||
Sbjct: 1704 cgcattggcacatggtgaatgtaa 1727
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     gccgccgccggcaacgcgcc 173
               ||||||||||||||||||||
Sbjct: 2879073 gccgccgccggcaacgcgcc 2879092
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>dbj|AP005554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1118_A10
          Length = 95161

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    ctccacccatggcgctctcc 30
             ||||||||||||||||||||
Sbjct: 77204 ctccacccatggcgctctcc 77223
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>dbj|AK098947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050E08, full
           insert sequence
          Length = 1849

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  ctccacccatggcgctctcc 30
           ||||||||||||||||||||
Sbjct: 100 ctccacccatggcgctctcc 119
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>dbj|AK072043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108N11, full
           insert sequence
          Length = 1816

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  ctccacccatggcgctctcc 30
           ||||||||||||||||||||
Sbjct: 100 ctccacccatggcgctctcc 119
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>dbj|AK068798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164B18,
          full insert sequence
          Length = 1793

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctccacccatggcgctctcc 30
          ||||||||||||||||||||
Sbjct: 55 ctccacccatggcgctctcc 74
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>dbj|AK059171.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-F01,
          full insert sequence
          Length = 1605

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctccacccatggcgctctcc 30
          ||||||||||||||||||||
Sbjct: 46 ctccacccatggcgctctcc 65
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>emb|AL162872.4|CNS01RI5 Human chromosome 14 DNA sequence BAC R-764E10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173106

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    gaatgtaacacaatggagaa 395
              ||||||||||||||||||||
Sbjct: 144034 gaatgtaacacaatggagaa 144053
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>gb|AC150714.3| Equus caballus clone CH241-187O21, complete sequence
          Length = 51837

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 360   cgcattggcagatggtgaatgtaa 383
             |||||||||| |||||||||||||
Sbjct: 45941 cgcattggcacatggtgaatgtaa 45964
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>emb|CT030164.9| Mouse DNA sequence from clone RP23-311P8 on chromosome 12, complete
              sequence
          Length = 224188

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 39     acccacctcatctcccttcctccc 62
              ||||| ||||||||||||||||||
Sbjct: 190487 acccatctcatctcccttcctccc 190464
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 360     cgcattggcagatggtgaatgtaa 383
               |||||||||| |||||||||||||
Sbjct: 1634348 cgcattggcacatggtgaatgtaa 1634371
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>dbj|D89140.1| Schizosaccharomyces pombe mRNA, partial cds, clone: SY 0552
          Length = 1168

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gcattggcagatggtgaatg 380
           ||||||||||||||||||||
Sbjct: 550 gcattggcagatggtgaatg 569


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,234,847
Number of Sequences: 3902068
Number of extensions: 3234847
Number of successful extensions: 68229
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67801
Number of HSP's gapped (non-prelim): 425
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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