| Clone Name | bast41d02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1517 Score = 432 bits (218), Expect = e-118 Identities = 263/278 (94%) Strand = Plus / Plus Query: 152 gaggatgacgacgacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtc 211 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 154 gaggacgacgacgacctctacggccgcctcaagtcgctccagcgccacatggagttcgtc 213 Query: 212 gagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgc 271 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 gagatacaggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgc 273 Query: 272 gcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggag 331 |||||||||||||| |||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 274 gcgcaggaggaggtgaagcggatccagtccgttcccctcgtgatcggccagttcatggag 333 Query: 332 atggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgc 391 |||||||||||||||||||| |||||||| ||||||||||| |||||||| || ||||| Sbjct: 334 atggtcgacggcaacaacggaatcgtcggatccaccaccgggagcaactattatgtgcgg 393 Query: 392 atcctcagcaccatcaaccgcgagctgctcaagccctc 429 ||||| |||||||||||||||||||||||||||||||| Sbjct: 394 atcctgagcaccatcaaccgcgagctgctcaagccctc 431
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 432 bits (218), Expect = e-118 Identities = 263/278 (94%) Strand = Plus / Plus Query: 152 gaggatgacgacgacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtc 211 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 13058398 gaggacgacgacgacctctacggccgcctcaagtcgctccagcgccacatggagttcgtc 13058457 Query: 212 gagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgc 271 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13058458 gagatacaggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgc 13058517 Query: 272 gcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggag 331 |||||||||||||| |||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 13058518 gcgcaggaggaggtgaagcggatccagtccgttcccctcgtgatcggccagttcatggag 13058577 Query: 332 atggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgc 391 |||||||||||||||||||| |||||||| ||||||||||| |||||||| || ||||| Sbjct: 13058578 atggtcgacggcaacaacggaatcgtcggatccaccaccgggagcaactattatgtgcgg 13058637 Query: 392 atcctcagcaccatcaaccgcgagctgctcaagccctc 429 ||||| |||||||||||||||||||||||||||||||| Sbjct: 13058638 atcctgagcaccatcaaccgcgagctgctcaagccctc 13058675
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 432 bits (218), Expect = e-118 Identities = 263/278 (94%) Strand = Plus / Plus Query: 152 gaggatgacgacgacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtc 211 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 34975 gaggacgacgacgacctctacggccgcctcaagtcgctccagcgccacatggagttcgtc 35034 Query: 212 gagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgc 271 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35035 gagatacaggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgc 35094 Query: 272 gcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggag 331 |||||||||||||| |||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 35095 gcgcaggaggaggtgaagcggatccagtccgttcccctcgtgatcggccagttcatggag 35154 Query: 332 atggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgc 391 |||||||||||||||||||| |||||||| ||||||||||| |||||||| || ||||| Sbjct: 35155 atggtcgacggcaacaacggaatcgtcggatccaccaccgggagcaactattatgtgcgg 35214 Query: 392 atcctcagcaccatcaaccgcgagctgctcaagccctc 429 ||||| |||||||||||||||||||||||||||||||| Sbjct: 35215 atcctgagcaccatcaaccgcgagctgctcaagccctc 35252
>dbj|AK071476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091H23, full insert sequence Length = 1518 Score = 432 bits (218), Expect = e-118 Identities = 263/278 (94%) Strand = Plus / Plus Query: 152 gaggatgacgacgacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtc 211 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 154 gaggacgacgacgacctctacggccgcctcaagtcgctccagcgccacatggagttcgtc 213 Query: 212 gagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgc 271 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 gagatacaggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgc 273 Query: 272 gcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggag 331 |||||||||||||| |||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 274 gcgcaggaggaggtgaagcggatccagtccgttcccctcgtgatcggccagttcatggag 333 Query: 332 atggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgc 391 |||||||||||||||||||| |||||||| ||||||||||| |||||||| || ||||| Sbjct: 334 atggtcgacggcaacaacggaatcgtcggatccaccaccgggagcaactattatgtgcgg 393 Query: 392 atcctcagcaccatcaaccgcgagctgctcaagccctc 429 ||||| |||||||||||||||||||||||||||||||| Sbjct: 394 atcctgagcaccatcaaccgcgagctgctcaagccctc 431
>gb|AY104317.1| Zea mays PCO132144 mRNA sequence Length = 1654 Score = 355 bits (179), Expect = 8e-95 Identities = 242/263 (92%) Strand = Plus / Plus Query: 164 gacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtcgagatccaggag 223 |||||||| ||||||||||| ||||| || |||||||||||||||||||| ||||||||| Sbjct: 230 gacctctatggccgcctcaaatcgctccaacgccacatggagttcgtcgaaatccaggag 289 Query: 224 gagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcaggaggag 283 |||||||| || |||||||||||||||||||||||||| || || || |||||||||||| Sbjct: 290 gagtacgttaaagacgagcagaagaacctgaagcgcgaactccttcgtgcgcaggaggag 349 Query: 284 gtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatggtcgacggc 343 || |||||||||||||| || ||||||||||| |||||||| |||||||||||||||||| Sbjct: 350 gttaagcggatccagtctgtaccgctcgtcattggccagtttatggagatggtcgacggc 409 Query: 344 aacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcacc 403 |||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 410 aacaacggcatcgtgggctctaccactggcagcaactactacgtgcggatcctcagcacc 469 Query: 404 atcaaccgcgagctgctcaagcc 426 |||||||||||| |||||||||| Sbjct: 470 atcaaccgcgagttgctcaagcc 492
>dbj|AB070253.1| Oryza sativa (japonica cultivar-group) OsRPT3 mRNA for 26S proteasome regulatory particle triple-A ATPase subunit3, partial cds Length = 1375 Score = 353 bits (178), Expect = 3e-94 Identities = 217/230 (94%) Strand = Plus / Plus Query: 200 atggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgc 259 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggagttcgtcgagatacaggaggagtacgtcaaggacgagcagaagaacctgaagcgc 60 Query: 260 gagctgctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggc 319 |||||||||||||||||||||||||| |||||||||||||| || || ||||| |||||| Sbjct: 61 gagctgctgcgcgcgcaggaggaggtgaagcggatccagtccgttcccctcgtgatcggc 120 Query: 320 cagttcatggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaac 379 |||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 121 cagttcatggagatggtcgacggcaacaacggaatcgtcggatccaccaccgggagcaac 180 Query: 380 tactacgtgcgcatcctcagcaccatcaaccgcgagctgctcaagccctc 429 || || ||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 181 tattatgtgcggatcctgagcaccatcaaccgcgagctgctcaagccctc 230
>dbj|AK059237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F02, full insert sequence Length = 1293 Score = 266 bits (134), Expect = 5e-68 Identities = 170/182 (93%) Strand = Plus / Plus Query: 248 aacctgaagcgcgagctgctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccg 307 |||||||||||||||||||||||||||||||||||||| |||||||||||||| || || Sbjct: 1 aacctgaagcgcgagctgctgcgcgcgcaggaggaggtgaagcggatccagtccgttccc 60 Query: 308 ctcgtcatcggccagttcatggagatggtcgacggcaacaacggcatcgtcggctccacc 367 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 61 ctcgtgatcggccagttcatggagatggtcgacggcaacaacggaatcgtcggatccacc 120 Query: 368 accggcagcaactactacgtgcgcatcctcagcaccatcaaccgcgagctgctcaagccc 427 ||||| |||||||| || ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 121 accgggagcaactattatgtgcggatcctgagcaccatcaaccgcgagctgctcaagccc 180 Query: 428 tc 429 || Sbjct: 181 tc 182
>gb|AY530962.1| Zea mays 26S proteasome regulatory complex ATPase RPT3 mRNA, complete cds Length = 1251 Score = 190 bits (96), Expect = 3e-45 Identities = 123/132 (93%) Strand = Plus / Plus Query: 295 ccagtcggtgccgctcgtcatcggccagttcatggagatggtcgacggcaacaacggcat 354 |||||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 51 ccagtctgtaccgctcgtcattggccagtttatggagatggtcgacggcaacaacggcat 110 Query: 355 cgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccgcga 414 ||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111 cgtgggctctaccactggcagcaactactacgtgcggatcctcagcaccatcaaccgcga 170 Query: 415 gctgctcaagcc 426 | |||||||||| Sbjct: 171 gttgctcaagcc 182 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 185 tcgctgcagcgccacatggagttcgtcgagatccaggaggagtacgt 231 ||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 1 tcgctccaacgccacatggagttcgtcgaaatccaggaggagtacgt 47
>gb|AC104510.6| Drosophila melanogaster X BAC RP98-26J12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168583 Score = 115 bits (58), Expect = 1e-22 Identities = 178/218 (81%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 |||||||||||| |||||||||||||| |||||||| ||| |||| ||| ||| Sbjct: 58884 caggaggagtacatcaaggacgagcagcgaaacctgaaaaaggagtatctgcacgcccag 58943 Query: 278 gaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatggtc 337 |||||||| ||||| ||||||||||||||||| || || ||||||||| ||||| ||| Sbjct: 58944 gaggaggtgaagcgcatccagtcggtgccgctggtgattggccagttcctggaggccgtc 59003 Query: 338 gacggcaacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgcatcctc 397 || |||| ||||| || ||||||||||||||| ||| ||||| ||||||||||| Sbjct: 59004 gatcagaacacgggcattgtgggctccaccaccggctccaattactatgtgcgcatcctg 59063 Query: 398 agcaccatcaaccgcgagctgctcaagccctccgcctc 435 ||||||| | ||||||||||| |||||||||||||| Sbjct: 59064 tccaccatcgatcgcgagctgctgaagccctccgcctc 59101
>ref|NM_132458.2| Drosophila melanogaster Rpt3 CG16916-RA (Rpt3), mRNA Length = 1488 Score = 115 bits (58), Expect = 1e-22 Identities = 178/218 (81%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 |||||||||||| |||||||||||||| |||||||| ||| |||| ||| ||| Sbjct: 279 caggaggagtacatcaaggacgagcagcgaaacctgaaaaaggagtatctgcacgcccag 338 Query: 278 gaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatggtc 337 |||||||| ||||| ||||||||||||||||| || || ||||||||| ||||| ||| Sbjct: 339 gaggaggtgaagcgcatccagtcggtgccgctggtgattggccagttcctggaggccgtc 398 Query: 338 gacggcaacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgcatcctc 397 || |||| ||||| || ||||||||||||||| ||| ||||| ||||||||||| Sbjct: 399 gatcagaacacgggcattgtgggctccaccaccggctccaattactatgtgcgcatcctg 458 Query: 398 agcaccatcaaccgcgagctgctcaagccctccgcctc 435 ||||||| | ||||||||||| |||||||||||||| Sbjct: 459 tccaccatcgatcgcgagctgctgaagccctccgcctc 496
>gb|AF145306.1|AF145306 Drosophila melanogaster 26S proteasome regulatory complex subunit p48A mRNA, complete cds Length = 1242 Score = 115 bits (58), Expect = 1e-22 Identities = 178/218 (81%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 |||||||||||| |||||||||||||| |||||||| ||| |||| ||| ||| Sbjct: 154 caggaggagtacatcaaggacgagcagcgaaacctgaaaaaggagtatctgcacgcccag 213 Query: 278 gaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatggtc 337 |||||||| ||||| ||||||||||||||||| || || ||||||||| ||||| ||| Sbjct: 214 gaggaggtgaagcgcatccagtcggtgccgctggtgattggccagttcctggaggccgtc 273 Query: 338 gacggcaacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgcatcctc 397 || |||| ||||| || ||||||||||||||| ||| ||||| ||||||||||| Sbjct: 274 gatcagaacacgggcattgtgggctccaccaccggctccaattactatgtgcgcatcctg 333 Query: 398 agcaccatcaaccgcgagctgctcaagccctccgcctc 435 ||||||| | ||||||||||| |||||||||||||| Sbjct: 334 tccaccatcgatcgcgagctgctgaagccctccgcctc 371
>gb|AE003485.3| Drosophila melanogaster chromosome X, section 37 of 74 of the complete sequence Length = 283075 Score = 115 bits (58), Expect = 1e-22 Identities = 178/218 (81%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 |||||||||||| |||||||||||||| |||||||| ||| |||| ||| ||| Sbjct: 39077 caggaggagtacatcaaggacgagcagcgaaacctgaaaaaggagtatctgcacgcccag 39136 Query: 278 gaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatggtc 337 |||||||| ||||| ||||||||||||||||| || || ||||||||| ||||| ||| Sbjct: 39137 gaggaggtgaagcgcatccagtcggtgccgctggtgattggccagttcctggaggccgtc 39196 Query: 338 gacggcaacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgcatcctc 397 || |||| ||||| || ||||||||||||||| ||| ||||| ||||||||||| Sbjct: 39197 gatcagaacacgggcattgtgggctccaccaccggctccaattactatgtgcgcatcctg 39256 Query: 398 agcaccatcaaccgcgagctgctcaagccctccgcctc 435 ||||||| | ||||||||||| |||||||||||||| Sbjct: 39257 tccaccatcgatcgcgagctgctgaagccctccgcctc 39294
>emb|BX070667.1|CNS09QOV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC7DD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 857 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 249 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 308 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 309 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 368 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 369 gtgcgcattctctccaccattgaccgggagctgctgaagcc 409
>emb|BX064587.1|CNS09LZZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC46DG01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 807 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 213 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 272 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 273 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 332 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 333 gtgcgcattctctccaccattgaccgggagctgctgaagcc 373
>emb|BX054412.1|CNS09E5C Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC32CC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 685 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 259 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 318 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 319 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 378 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 379 gtgcgcattctctccaccattgaccgggagctgctgaagcc 419
>emb|BX050544.1|CNS09B5W Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC27AD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 722 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 262 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 321 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 322 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 381 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 382 gtgcgcattctctccaccattgaccgggagctgctgaagcc 422
>emb|BX048934.1|CNS099X6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC24BG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 943 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 282 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 341 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 342 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 401 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 402 gtgcgcattctctccaccattgaccgggagctgctgaagcc 442
>emb|BX046223.1|CNS097TV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC2DB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 806 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 279 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 338 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 339 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 398 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 399 gtgcgcattctctccaccattgaccgggagctgctgaagcc 439
>emb|BX031108.1|CNS08W60 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46BG01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 977 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 243 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 302 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 303 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 362 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 363 gtgcgcattctctccaccattgaccgggagctgctgaagcc 403
>emb|BX030209.1|CNS08VH1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA45AE03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 931 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 247 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 306 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 307 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 366 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 367 gtgcgcattctctccaccattgaccgggagctgctgaagcc 407
>emb|BX010366.1|CNS08G5U Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA16CG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 335 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 117 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 176 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 177 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 236 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 237 gtgcgcatactctccaccattgaccgggagctgctgaagcc 277
>ref|XM_502714.1| Yarrowia lipolytica CLIB122, YALI0D11770g predicted mRNA Length = 1215 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||| |||||| |||| ||||||||| ||||||||||||||||| |||| || ||| Sbjct: 118 caggaagagtacatcaaagacgagcagcgccacctgaagcgcgagctggtgcgagcccag 177 Query: 278 gaggaggtcaagcggatccagtcggtgcc 306 ||||||||||||||||||||||||||||| Sbjct: 178 gaggaggtcaagcggatccagtcggtgcc 206
>emb|BX067090.1|CNS09NXI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC50CE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1015 Score = 97.6 bits (49), Expect = 3e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 228 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 287 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 288 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 347 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| || |||||| |||| |||||||| ||||| Sbjct: 348 gtgcgcattctgtccaccattgaccgggagctgctgaagcc 388
>emb|BX060433.1|CNS09ISL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC40DC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 596 Score = 97.6 bits (49), Expect = 3e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 244 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 303 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| ||| |||||| Sbjct: 304 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaattactac 363 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 364 gtgcgcattctctccaccattgaccgggagctgctgaagcc 404
>emb|BX047010.1|CNS098FQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC20DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 647 Score = 97.6 bits (49), Expect = 3e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 211 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 270 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| ||| |||||| Sbjct: 271 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaattactac 330 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 331 gtgcgcattctctccaccattgaccgggagctgctgaagcc 371
>emb|BX033447.1|CNS08XYZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA49DG04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 994 Score = 97.6 bits (49), Expect = 3e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 251 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 310 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| ||| |||||| Sbjct: 311 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaattactac 370 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 371 gtgcgcattctctccaccattgaccgggagctgctgaagcc 411
>emb|BX033071.1|CNS08XOJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA49BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 688 Score = 97.6 bits (49), Expect = 3e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 231 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 290 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| ||| |||||| Sbjct: 291 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaattactac 350 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 351 gtgcgcattctctccaccattgaccgggagctgctgaagcc 391
>emb|BX009898.1|CNS08FSU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15DH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 803 Score = 97.6 bits (49), Expect = 3e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| | ||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 254 ctgcacgcgcaggaaggggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 313 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 314 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 373 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 374 gtgcgcattctctccaccattgaccgggagctgctgaagcc 414
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||| |||||| |||| ||||||||| ||||||||||||||||| |||| || ||| Sbjct: 1460482 caggaagagtacatcaaagacgagcagcgccacctgaagcgcgagctggtgcgagcccag 1460423 Query: 278 gaggaggtcaagcggatccagtcggtgcc 306 ||||||||||||||||||||||||||||| Sbjct: 1460422 gaggaggtcaagcggatccagtcggtgcc 1460394
>gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete sequence Length = 96930 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 221 gaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcaggag 280 |||||||| |||||||| ||||||||||| ||||| || ||||| || || ||||| || Sbjct: 24090 gaggagtatgtcaaggatgagcagaagaatctgaaacgagagctacttcgtgcgcaagaa 24031 Query: 281 gaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatggt 336 ||||| ||||||||||||||||| ||||| || | ||| ||||| ||||||||||| Sbjct: 24030 gaggtgaagcggatccagtcggtcccgcttgtaagcgggcagtttatggagatggt 23975
>emb|BX046999.1|CNS098FF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC20DH03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 878 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 199 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 258 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| ||| |||||| Sbjct: 259 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaattactac 318 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagc 425 |||||||| ||| |||||| |||| |||||||| |||| Sbjct: 319 gtgcgcattctctccaccattgaccgggagctgctgaagc 358
>emb|BX057191.1|CNS09GAJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC37AB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 867 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 281 gaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatggtcgac 340 ||||| ||||| |||||||||||||||||||| || ||||||||| ||||| |||||| Sbjct: 270 gaggtgaagcgcatccagtcggtgccgctcgtaattggccagttcctggaggcggtcgat 329 Query: 341 ggcaacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagc 400 |||| ||| |||||||| || |||||||| |||||||||||||||||| ||| | Sbjct: 330 cagaacaccggtatcgtcggttcgaccaccgggtccaactactacgtgcgcattctctcc 389 Query: 401 accatcaaccgcgagctgctcaagcc 426 ||||| |||| |||||||| ||||| Sbjct: 390 accattgaccgggagctgctgaagcc 415
>emb|BX049213.1|CNS09A4X Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC24DH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 926 Score = 91.7 bits (46), Expect = 2e-15 Identities = 134/162 (82%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 260 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 319 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccac-caccggcagcaactacta 384 ||||| |||||| |||| ||| |||||||| || || |||||| ||||||||| Sbjct: 320 ctggaggcggtcgatcagaacaccggtatcgtcggttcgactcaccgggtccaactacta 379 Query: 385 cgtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 ||||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 380 cgtgcgcattctctccaccattgaccgggagctgctgaagcc 421
>emb|BX034840.1|CNS08Z1O Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA50DG04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 351 Score = 89.7 bits (45), Expect = 7e-15 Identities = 132/161 (81%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||||||||||| ||| || ||||||||| Sbjct: 45 ctgcacgcgcaggaagaggtgaagcgcatccagtcggtgccgcccgtaattggccagttc 104 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| ||| |||||| Sbjct: 105 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaattactac 164 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 165 gtgcgcattctctccaccattgaccgggagctgctgaagcc 205
>emb|BX030222.1|CNS08VHE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA45AE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 936 Score = 89.7 bits (45), Expect = 7e-15 Identities = 132/161 (81%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||| ||| ||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 274 ctgcacgcgcgggaagaggtgaagcgcatccagtcggtgccgctcgtaattggccagttc 333 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| ||| |||||| Sbjct: 334 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggcccaattactac 393 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 394 gtgcgcattctctccaccattgaccgggagctgctgaagcc 434
>ref|XM_311871.2| Anopheles gambiae str. PEST ENSANGP00000023984 (ENSANGG00000015165), partial mRNA Length = 1374 Score = 89.7 bits (45), Expect = 7e-15 Identities = 132/161 (81%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||| ||||||||||| || ||||||||| Sbjct: 205 ctgcacgcgcaggaagaggtgaagcgcatccagtcagtgccgctcgtaattggccagttc 264 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 265 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 324 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| || |||||| |||| |||||||| ||||| Sbjct: 325 gtgcgcattctgtccaccattgaccgggagctgctgaagcc 365
>ref|XM_311870.2| Anopheles gambiae str. PEST ENSANGP00000017654 (ENSANGG00000015165), partial mRNA Length = 1449 Score = 89.7 bits (45), Expect = 7e-15 Identities = 132/161 (81%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||| ||||||||| ||||| ||||| |||||||| ||||||||||| || ||||||||| Sbjct: 280 ctgcacgcgcaggaagaggtgaagcgcatccagtcagtgccgctcgtaattggccagttc 339 Query: 326 atggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactactac 385 ||||| |||||| |||| ||| |||||||| || |||||||| |||||||||| Sbjct: 340 ctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaactactac 399 Query: 386 gtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 |||||||| || |||||| |||| |||||||| ||||| Sbjct: 400 gtgcgcattctgtccaccattgaccgggagctgctgaagcc 440
>emb|BX009775.1|CNS08FPF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15DB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 973 Score = 87.7 bits (44), Expect = 3e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 287 aagcggatccagtcggtgccgctcgtcatcggccagttcatggagatggtcgacggcaac 346 ||||| |||||||||||||||||||| || ||||||||| ||||| |||||| ||| Sbjct: 280 aagcgcatccagtcggtgccgctcgtaattggccagttcctggaggcggtcgatcagaac 339 Query: 347 aacggcatcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatc 406 | ||| |||||||| || |||||||| |||||||||||||||||| ||| |||||| Sbjct: 340 accggtatcgtcggttcgaccaccgggtccaactactacgtgcgcattctctccaccatt 399 Query: 407 aaccgcgagctgctcaagcc 426 |||| |||||||| ||||| Sbjct: 400 gaccgggagctgctgaagcc 419
>emb|BX049201.1|CNS09A4L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC24DH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 654 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 281 gaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatggtcgac 340 ||||| ||||| |||||||||||||||||||| || ||||||||| ||||| |||||| Sbjct: 282 gaggtgaagcgcatccagtcggtgccgctcgtaattggccagttcctggaggcggtcgat 341 Query: 341 ggcaacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagc 400 |||| ||| |||||||| || |||||||| |||||||||||||||||| ||| | Sbjct: 342 cagaacaccggtatcgtcggttcgaccaccgggtccaactactacgtgcgcattctctcc 401 Query: 401 accatcaaccgcgagctgc 419 ||||| |||| ||||||| Sbjct: 402 accattgaccgggagctgc 420
>ref|XM_751600.1| Ustilago maydis 521 26S protease regulatory subunit 6B (UM00546.1) partial mRNA Length = 1155 Score = 83.8 bits (42), Expect = 4e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 220 ggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcagga 279 |||||||||||| || || || |||| ||| |||| ||||||||| || | ||||| || Sbjct: 72 ggaggagtacgttaaagatgaacagagaaacttgaaacgcgagctggtgagagcgcaaga 131 Query: 280 ggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttc 325 |||||| ||||| ||||||||||| || |||||||||||||||||| Sbjct: 132 ggaggtgaagcgcatccagtcggttcccctcgtcatcggccagttc 177
>emb|BX064828.1|CNS09M6O Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC48BH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 260 Score = 83.8 bits (42), Expect = 4e-13 Identities = 133/162 (82%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 266 ctgcgcgcgcaggaggaggtcaagcggatccag-tcggtgccgctcgtcatcggccagtt 324 |||| ||||||||| ||||| ||||| |||||| |||||||||||||| || |||||||| Sbjct: 62 ctgcacgcgcaggaagaggtgaagcgcatccagatcggtgccgctcgtaattggccagtt 121 Query: 325 catggagatggtcgacggcaacaacggcatcgtcggctccaccaccggcagcaactacta 384 | ||||| |||||| |||| ||| |||||||| || |||||||| ||| ||||| Sbjct: 122 cctggaggcggtcgatcagaacaccggtatcgtcggttcgaccaccgggtccaattacta 181 Query: 385 cgtgcgcatcctcagcaccatcaaccgcgagctgctcaagcc 426 ||||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 182 cgtgcgcattctctccaccattgaccgggagctgctgaagcc 223
>ref|XM_962883.1| PREDICTED: Tribolium castaneum similar to CG16916-PA (LOC656344), mRNA Length = 1230 Score = 83.8 bits (42), Expect = 4e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 275 caggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagtt 324 ||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 199 caggaggaggtgaagcggatccagtcggtgccgcttgtcatcggccagtt 248
>emb|BX035108.1|CNS08Z94 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA6BC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 887 Score = 83.8 bits (42), Expect = 4e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 281 gaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatggtcgac 340 ||||| ||||| |||||||||||||||||||| || ||||||||| ||||| |||||| Sbjct: 201 gaggtgaagcgcatccagtcggtgccgctcgtaattggccagttcctggaggcggtcgat 260 Query: 341 ggcaacaacggcatcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagc 400 |||| ||| |||||||| || |||||||| ||| |||||||||||||| ||| | Sbjct: 261 cagaacaccggtatcgtcggttcgaccaccgggtccaattactacgtgcgcattctctcc 320 Query: 401 accatcaaccgcgagctgctcaagcc 426 ||||| |||| |||||||| ||||| Sbjct: 321 accattgaccgggagctgctgaagcc 346
>gb|BC102595.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase, 4, mRNA (cDNA clone MGC:127979 IMAGE:7961736), complete cds Length = 1498 Score = 79.8 bits (40), Expect = 7e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||||||| ||||||||||| |||||||| |||| Sbjct: 345 catcgtgggctccaccacaggctccaactactatgtgcgcatcctgagcaccattgaccg 404 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 405 ggagctgctcaagccc 420 Score = 40.1 bits (20), Expect = 5.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaag 256 |||||||| | ||| | ||||||||||| ||||||| || || |||||||||||| Sbjct: 194 tggagttcctggaggtgcaggaggagtatatcaaggatgaacaaaagaacctgaag 249
>ref|NM_001035083.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase, 4 (PSMC4), mRNA Length = 1498 Score = 79.8 bits (40), Expect = 7e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||||||| ||||||||||| |||||||| |||| Sbjct: 345 catcgtgggctccaccacaggctccaactactatgtgcgcatcctgagcaccattgaccg 404 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 405 ggagctgctcaagccc 420 Score = 40.1 bits (20), Expect = 5.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaag 256 |||||||| | ||| | ||||||||||| ||||||| || || |||||||||||| Sbjct: 194 tggagttcctggaggtgcaggaggagtatatcaaggatgaacaaaagaacctgaag 249
>ref|XM_861948.1| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7), transcript variant 4 (LOC476459), mRNA Length = 1413 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 359 ggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccgcgagctg 418 ||||||||||| ||| ||||||||| ||||||||||| |||||||| |||| |||||| Sbjct: 339 ggctccaccacaggctccaactactatgtgcgcatcctgagcaccattgaccgggagctg 398 Query: 419 ctcaagcc 426 |||||||| Sbjct: 399 ctcaagcc 406 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaag 256 |||||||||||| ||||||| |||||||||||||||||| Sbjct: 198 caggaggagtacatcaaggatgagcagaagaacctgaag 236
>ref|XM_861938.1| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7), transcript variant 3 (LOC476459), mRNA Length = 1455 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 359 ggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccgcgagctg 418 ||||||||||| ||| ||||||||| ||||||||||| |||||||| |||| |||||| Sbjct: 339 ggctccaccacaggctccaactactatgtgcgcatcctgagcaccattgaccgggagctg 398 Query: 419 ctcaagcc 426 |||||||| Sbjct: 399 ctcaagcc 406 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaag 256 |||||||||||| ||||||| |||||||||||||||||| Sbjct: 198 caggaggagtacatcaaggatgagcagaagaacctgaag 236
>ref|XM_861928.1| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7), transcript variant 2 (LOC476459), mRNA Length = 1307 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 359 ggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccgcgagctg 418 ||||||||||| ||| ||||||||| ||||||||||| |||||||| |||| |||||| Sbjct: 236 ggctccaccacaggctccaactactatgtgcgcatcctgagcaccattgaccgggagctg 295 Query: 419 ctcaagcc 426 |||||||| Sbjct: 296 ctcaagcc 303
>ref|XM_533670.2| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7), transcript variant 1 (LOC476459), mRNA Length = 1411 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 359 ggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccgcgagctg 418 ||||||||||| ||| ||||||||| ||||||||||| |||||||| |||| |||||| Sbjct: 340 ggctccaccacaggctccaactactatgtgcgcatcctgagcaccattgaccgggagctg 399 Query: 419 ctcaagcc 426 |||||||| Sbjct: 400 ctcaagcc 407 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaag 256 |||||||||||| ||||||| |||||||||||||||||| Sbjct: 199 caggaggagtacatcaaggatgagcagaagaacctgaag 237
>gb|AY609898.1| Sus scrofa clone Clu_40992.scr.msk.p1.Contig1, mRNA sequence Length = 1412 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||||||| ||||||||||| |||||||| | || Sbjct: 343 catcgtgggctccaccacaggctccaactactatgtgcgcatcctgagcaccattgatcg 402 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 403 ggagctgctcaagccc 418 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaag 256 |||||||| | ||| | |||||||||||| ||||||| ||||| |||||||||||| Sbjct: 192 tggagttcctggaggtgcaggaggagtacatcaaggatgagcaaaagaacctgaag 247
>ref|XM_423605.1| PREDICTED: Gallus gallus similar to 26S protease regulatory subunit 6B (TAT-binding protein-7) (TBP-7) (LOC425916), partial mRNA Length = 473 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 362 tccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccgcgagctgct 420 |||||||||||| ||| ||||||||||||||||| ||||||||| |||| |||||||| Sbjct: 388 tccaccaccggctccaattactacgtgcgcatcctgagcaccatcgaccgggagctgct 446 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcg 260 |||||||| | ||| | |||||||||||| | |||||||||||||||||||| ||| | Sbjct: 227 tggagttcctggaggtgcaggaggagtacataaaggacgagcagaagaacctcaagaagg 286 Query: 261 agctgctgcgcgcgcaggaggaggtcaagcggatcca 297 | | |||| ||| ||||||||||| ||||| ||||| Sbjct: 287 aattcctgcacgcccaggaggaggtgaagcgcatcca 323
>dbj|AB040869.2| Mus musculus TBP7/PSMC4 gene for proteasomal ATPase, complete cds Length = 2371 Score = 69.9 bits (35), Expect = 7e-09 Identities = 82/98 (83%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcg 260 |||||||| | ||| | ||||||||||| |||||||||||||||||||||||||| | Sbjct: 377 tggagttcctggaggtncaggaggagtatatcaaggacgagcagaagaacctgaagaagg 436 Query: 261 agctgctgcgcgcgcaggaggaggtcaagcggatccag 298 | | || | ||| ||||||||||| |||||||||||| Sbjct: 437 aattcctccacgcccaggaggaggtgaagcggatccag 474
>ref|NM_011874.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 4 (Psmc4), mRNA Length = 1371 Score = 69.9 bits (35), Expect = 7e-09 Identities = 82/98 (83%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcg 260 |||||||| | ||| | ||||||||||| |||||||||||||||||||||||||| | Sbjct: 177 tggagttcctggaggtncaggaggagtatatcaaggacgagcagaagaacctgaagaagg 236 Query: 261 agctgctgcgcgcgcaggaggaggtcaagcggatccag 298 | | || | ||| ||||||||||| |||||||||||| Sbjct: 237 aattcctccacgcccaggaggaggtgaagcggatccag 274 Score = 40.1 bits (20), Expect = 5.9 Identities = 62/76 (81%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| | ||||||||| ||| ||||| || |||||||| | || |||||| |||| Sbjct: 328 catcgtggcctccaccacaggctctaactattatgtgcgcatggtgagtaccatcgaccg 387 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 388 ggagctgctcaagccc 403
>gb|L76223.1|MUSCIP21R Mus musculus 26S proteasome ATPase (CIP21) mRNA, complete cds Length = 1371 Score = 69.9 bits (35), Expect = 7e-09 Identities = 82/98 (83%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcg 260 |||||||| | ||| | ||||||||||| |||||||||||||||||||||||||| | Sbjct: 177 tggagttcctggaggtncaggaggagtatatcaaggacgagcagaagaacctgaagaagg 236 Query: 261 agctgctgcgcgcgcaggaggaggtcaagcggatccag 298 | | || | ||| ||||||||||| |||||||||||| Sbjct: 237 aattcctccacgcccaggaggaggtgaagcggatccag 274 Score = 40.1 bits (20), Expect = 5.9 Identities = 62/76 (81%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| | ||||||||| ||| ||||| || |||||||| | || |||||| |||| Sbjct: 328 catcgtggcctccaccacaggctctaactattatgtgcgcatggtgagtaccatcgaccg 387 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 388 ggagctgctcaagccc 403
>gb|BC012708.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 4, mRNA (cDNA clone MGC:13997 IMAGE:4211677), complete cds Length = 1406 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcg 260 |||||||| | ||| | ||||||||||| |||||||||||||||||||||||||| | Sbjct: 187 tggagttcctggaggtgcaggaggagtatatcaaggacgagcagaagaacctgaagaagg 246 Query: 261 agctgctgcgcgcgcaggaggaggtcaagcggatccag 298 | | || | ||| ||||||||||| |||||||||||| Sbjct: 247 aattcctccacgcccaggaggaggtgaagcggatccag 284 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 338 catcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 397 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 398 ggagctgctcaagccc 413
>gb|BC092265.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 4, mRNA (cDNA clone MGC:103150 IMAGE:3671250), complete cds Length = 1411 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcg 260 |||||||| | ||| | ||||||||||| |||||||||||||||||||||||||| | Sbjct: 170 tggagttcctggaggtgcaggaggagtatatcaaggacgagcagaagaacctgaagaagg 229 Query: 261 agctgctgcgcgcgcaggaggaggtcaagcggatccag 298 | | || | ||| ||||||||||| |||||||||||| Sbjct: 230 aattcctccacgcccaggaggaggtgaagcggatccag 267 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 321 catcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 380 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 381 ggagctgctcaagccc 396
>gb|AC158220.4| Mus musculus chromosome 7, clone RP23-278M8, complete sequence Length = 189304 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||||||||| |||||||||||||||||||||||||| || | || | ||| ||| Sbjct: 112483 caggaggagtatatcaaggacgagcagaagaacctgaagaaggaattcctccacgcccag 112542 Query: 278 gaggaggtcaagcggatccag 298 |||||||| |||||||||||| Sbjct: 112543 gaggaggtgaagcggatccag 112563 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 377 aactactacgtgcgcatcctcagcaccatcaaccgcgagctgctcaagccc 427 ||||| || ||||||||||| || |||||| |||| ||||||||||||||| Sbjct: 113922 aactattatgtgcgcatcctgagtaccatcgaccgggagctgctcaagccc 113972
>dbj|AK150989.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830019K15 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 972 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||||||||| |||||||||||||||||||||||||| || | || | ||| ||| Sbjct: 198 caggaggagtatatcaaggacgagcagaagaacctgaagaaggaattcctccacgcccag 257 Query: 278 gaggaggtcaagcggatccag 298 |||||||| |||||||||||| Sbjct: 258 gaggaggtgaagcggatccag 278 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 332 catcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 391 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 392 ggagctgctcaagccc 407
>dbj|AK153991.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430019J12 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1409 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||||||||| |||||||||||||||||||||||||| || | || | ||| ||| Sbjct: 226 caggaggagtatatcaaggacgagcagaagaacctgaagaaggaattcctccacgcccag 285 Query: 278 gaggaggtcaagcggatccag 298 |||||||| |||||||||||| Sbjct: 286 gaggaggtgaagcggatccag 306 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 360 catcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 419 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 420 ggagctgctcaagccc 435
>dbj|AK167528.1| Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530018N08 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1380 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||||||||| |||||||||||||||||||||||||| || | || | ||| ||| Sbjct: 198 caggaggagtatatcaaggacgagcagaagaacctgaagaaggaattcctccacgcccag 257 Query: 278 gaggaggtcaagcggatccag 298 |||||||| |||||||||||| Sbjct: 258 gaggaggtgaagcggatccag 278 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 332 catcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 391 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 392 ggagctgctcaagccc 407
>dbj|AK160718.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010086G18 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1375 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||||||||| |||||||||||||||||||||||||| || | || | ||| ||| Sbjct: 197 caggaggagtatatcaaggacgagcagaagaacctgaagaaggaattcctccacgcccag 256 Query: 278 gaggaggtcaagcggatccag 298 |||||||| |||||||||||| Sbjct: 257 gaggaggtgaagcggatccag 277 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 331 catcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 390 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 391 ggagctgctcaagccc 406
>dbj|AK160644.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810035H13 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1382 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||||||||| |||||||||||||||||||||||||| || | || | ||| ||| Sbjct: 205 caggaggagtatatcaaggacgagcagaagaacctgaagaaggaattcctccacgcccag 264 Query: 278 gaggaggtcaagcggatccag 298 |||||||| |||||||||||| Sbjct: 265 gaggaggtgaagcggatccag 285 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 339 catcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 398 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 399 ggagctgctcaagccc 414
>dbj|AK167041.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0028L02 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||||||||| |||||||||||||||||||||||||| || | || | ||| ||| Sbjct: 188 caggaggagtatatcaaggacgagcagaagaacctgaagaaggaattcctccacgcccag 247 Query: 278 gaggaggtcaagcggatccag 298 |||||||| |||||||||||| Sbjct: 248 gaggaggtgaagcggatccag 268 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 322 catcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 381 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 382 ggagctgctcaagccc 397
>dbj|AK169244.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920097L15 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1883 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||||||||| |||||||||||||||||||||||||| || | || | ||| ||| Sbjct: 706 caggaggagtatatcaaggacgagcagaagaacctgaagaaggaattcctccacgcccag 765 Query: 278 gaggaggtcaagcggatccag 298 |||||||| |||||||||||| Sbjct: 766 gaggaggtgaagcggatccag 786 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||| ||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 840 catcgtgggccccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 899 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 900 ggagctgctcaagccc 915
>dbj|AK169224.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920092H04 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1388 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||||||||| |||||||||||||||||||||||||| || | || | ||| ||| Sbjct: 206 caggaggagtatatcaaggacgagcagaagaacctgaagaaggaattcctccacgcccag 265 Query: 278 gaggaggtcaagcggatccag 298 |||||||| |||||||||||| Sbjct: 266 gaggaggtgaagcggatccag 286 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 340 catcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 399 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 400 ggagctgctcaagccc 415
>dbj|AK077507.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730428I01 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1388 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||||||||| |||||||||||||||||||||||||| || | || | ||| ||| Sbjct: 206 caggaggagtatatcaaggacgagcagaagaacctgaagaaggaattcctccacgcccag 265 Query: 278 gaggaggtcaagcggatccag 298 |||||||| |||||||||||| Sbjct: 266 gaggaggtgaagcggatccag 286 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 340 catcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 399 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 400 ggagctgctcaagccc 415
>dbj|AK050677.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030002E20 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1403 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 ||||||||||| |||||||||||||||||||||||||| || | || | ||| ||| Sbjct: 221 caggaggagtatatcaaggacgagcagaagaacctgaagaaggaattcctccacgcccag 280 Query: 278 gaggaggtcaagcggatccag 298 |||||||| |||||||||||| Sbjct: 281 gaggaggtgaagcggatccag 301 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||||||||| ||| ||||| || ||||||||||| || |||||| |||| Sbjct: 355 catcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgaccg 414 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 415 ggagctgctcaagccc 430
>ref|NM_153001.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4 (PSMC4), transcript variant 2, mRNA Length = 1363 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 247 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 306 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 307 ggagctgctcaagccc 322
>ref|NM_006503.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4 (PSMC4), transcript variant 1, mRNA Length = 1450 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 340 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 399 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 400 ggagctgctcaagccc 415
>gb|BC010396.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4, transcript variant 2, mRNA (cDNA clone MGC:13687 IMAGE:4046205), complete cds Length = 1363 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 247 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 306 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 307 ggagctgctcaagccc 322
>gb|BC014488.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4, transcript variant 1, mRNA (cDNA clone MGC:23214 IMAGE:4899042), complete cds Length = 1433 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 323 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 382 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 383 ggagctgctcaagccc 398
>gb|BC000343.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4, transcript variant 1, mRNA (cDNA clone MGC:8570 IMAGE:2823007), complete cds Length = 1426 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 323 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 382 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 383 ggagctgctcaagccc 398
>gb|BT008218.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4 mRNA, partial cds Length = 1257 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 303 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 362 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 363 ggagctgctcaagccc 378
>gb|BT007232.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4 mRNA, complete cds Length = 1257 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 303 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 362 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 363 ggagctgctcaagccc 378
>emb|CR624768.1| full-length cDNA clone CS0DB003YP08 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1094 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 17 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 76 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 77 ggagctgctcaagccc 92
>emb|CR624681.1| full-length cDNA clone CS0DI024YO05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1392 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 320 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 379 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 380 ggagctgctcaagccc 395
>emb|CR621309.1| full-length cDNA clone CS0DD009YP22 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1375 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 317 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 376 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 377 ggagctgctcaagccc 392
>emb|CR619473.1| full-length cDNA clone CS0DH005YK15 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1393 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 336 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 395 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 396 ggagctgctcaagccc 411
>emb|CR616731.1| full-length cDNA clone CS0DI027YF12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1374 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 323 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 382 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 383 ggagctgctcaagccc 398
>emb|CR611800.1| full-length cDNA clone CS0DF038YP01 of Fetal brain of Homo sapiens (human) Length = 1532 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 336 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 395 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 396 ggagctgctcaagccc 411
>emb|CR607304.1| full-length cDNA clone CS0DI054YC02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1371 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 336 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 395 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 396 ggagctgctcaagccc 411
>emb|CR606858.1| full-length cDNA clone CS0DI008YH10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1355 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 313 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 372 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 373 ggagctgctcaagccc 388
>emb|CR604327.1| full-length cDNA clone CS0DE011YH14 of Placenta of Homo sapiens (human) Length = 1403 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 335 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 394 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 395 ggagctgctcaagccc 410
>emb|CR603370.1| full-length cDNA clone CS0DI020YH15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1351 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 335 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 394 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 395 ggagctgctcaagccc 410
>emb|CR602157.1| full-length cDNA clone CS0DI077YD19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1387 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 319 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 378 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 379 ggagctgctcaagccc 394
>emb|CR597394.1| full-length cDNA clone CS0DJ014YC04 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1414 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 336 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 395 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 396 ggagctgctcaagccc 411
>emb|CR594223.1| full-length cDNA clone CS0DJ006YJ24 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1351 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 322 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 381 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 382 ggagctgctcaagccc 397
>emb|CR591096.1| full-length cDNA clone CS0DB007YG13 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1385 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 313 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 372 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 373 ggagctgctcaagccc 388
>ref|XM_942509.1| PREDICTED: Homo sapiens similar to 26S protease regulatory subunit 6B (MIP224) (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (LOC652826), mRNA Length = 1396 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 291 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 350 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 351 ggagctgctcaagccc 366
>gb|AF038965.1| Homo sapiens 26S proteasome ATPase subunit mRNA, complete cds Length = 1439 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 325 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 384 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 385 ggagctgctcaagccc 400
>gb|AY891402.1| Synthetic construct Homo sapiens clone FLH025948.01L proteasome 26S subunit 4 (PSMC4) mRNA, partial cds Length = 1257 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 303 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 362 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 363 ggagctgctcaagccc 378
>gb|AY891401.1| Synthetic construct Homo sapiens clone FLH025947.01L proteasome 26S subunit 4 (PSMC4) mRNA, partial cds Length = 1257 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 303 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 362 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 363 ggagctgctcaagccc 378
>gb|AY888748.1| Synthetic construct Homo sapiens clone FLH025951.01X proteasome 26S subunit 4 (PSMC4) mRNA, complete cds Length = 1257 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 303 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 362 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 363 ggagctgctcaagccc 378
>gb|U27515.1|HSU27515 Human MIP224 (MIP224) mRNA, complete cds Length = 1425 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 315 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 374 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 375 ggagctgctcaagccc 390
>gb|BC018811.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4, transcript variant 1, mRNA (cDNA clone IMAGE:2961362) Length = 1426 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || Sbjct: 323 catcgtgggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcg 382 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 383 ggagctgctcaagccc 398
>gb|BT012705.1| Lycopersicon esculentum clone 113583F, mRNA sequence Length = 1608 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 272 gcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggag 331 |||||||| ||||| || |||||||| ||||||||| | || || ||||||||||||||| Sbjct: 263 gcgcaggaagaggtaaaacggatccaatcggtgccgttagtaattggccagttcatggag 322 Query: 332 atg 334 ||| Sbjct: 323 atg 325 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 161 gacgacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtcgagatccag 220 ||||||||||||| ||||| || || || ||||| || |||||||| |||||||||| Sbjct: 152 gacgacctctacgctcgcctgaaatctctacagcggcagctggagttcatcgagatccaa 211 Query: 221 gaggagtacgtcaaggacgagcagaagaa 249 ||||| ||||| |||||||| | |||||| Sbjct: 212 gaggaatacgtgaaggacgaactgaagaa 240
>gb|BC063145.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase, 4, mRNA (cDNA clone MGC:72664 IMAGE:6889167), complete cds Length = 1401 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcg 260 |||||||| | ||| | ||||||||||| ||||||| |||||||||||||||||| | Sbjct: 174 tggagttcctggaggtgcaggaggagtatatcaaggatgagcagaagaacctgaagaagg 233 Query: 261 agctgctgcgcgcgcaggaggaggtcaagcggatccag 298 || | || | |||||||||||||| ||||| |||||| Sbjct: 234 agttcctccatgcgcaggaggaggtaaagcgaatccag 271
>ref|NM_057122.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase, 4 (Psmc4), mRNA Length = 1376 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcg 260 |||||||| | ||| | ||||||||||| ||||||| |||||||||||||||||| | Sbjct: 164 tggagttcctggaggtgcaggaggagtatatcaaggatgagcagaagaacctgaagaagg 223 Query: 261 agctgctgcgcgcgcaggaggaggtcaagcggatccag 298 || | || | |||||||||||||| ||||| |||||| Sbjct: 224 agttcctccatgcgcaggaggaggtaaagcgaatccag 261
>dbj|D50695.1|RATTBP7B Rattus norvegicus mRNA for proteasomal ATPase (Tat-binding protein7), complete cds Length = 1397 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 201 tggagttcgtcgagatccaggaggagtacgtcaaggacgagcagaagaacctgaagcgcg 260 |||||||| | ||| | ||||||||||| ||||||| |||||||||||||||||| | Sbjct: 164 tggagttcctggaggtgcaggaggagtatatcaaggatgagcagaagaacctgaagaagg 223 Query: 261 agctgctgcgcgcgcaggaggaggtcaagcggatccag 298 || | || | |||||||||||||| ||||| |||||| Sbjct: 224 agttcctccatgcgcaggaggaggtaaagcgaatccag 261
>dbj|AB168803.1| Macaca fascicularis testis cDNA, clone: QtsA-14940, similar to human proteasome (prosome, macropain) 26S subunit, ATPase, 4(PSMC4), transcript variant 1, mRNA, RefSeq: NM_006503.2 Length = 1654 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 359 ggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccgcgagctg 418 ||||| ||||| ||| |||||| || ||||||||||| ||||||||| | || |||||| Sbjct: 488 ggctctaccacaggctccaactattatgtgcgcatcctgagcaccatcgatcgggagctg 547 Query: 419 ctcaagccc 427 ||||||||| Sbjct: 548 ctcaagccc 556
>ref|XM_512659.1| PREDICTED: Pan troglodytes similar to proteasome 26S ATPase subunit 4 isoform 2; protease 26S subunit 6; Tat-binding protein 7; MB67 interacting protein (LOC456032), mRNA Length = 1506 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 376 caactactacgtgcgcatcctcagcaccatcaaccgcgagctgctcaagccc 427 |||||| || ||||||||||| ||||||||| | || ||||||||||||||| Sbjct: 666 caactattatgtgcgcatcctgagcaccatcgatcgggagctgctcaagccc 717
>gb|AC114900.26| Ustilago hordei strain 4875-4 clone uhobac-2b7, complete sequence Length = 100829 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 224 gagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcaggaggag 283 |||||||||||||||||||| || ||||| |||||||| | | ||||| |||||| Sbjct: 78428 gagtacgtcaaggacgagcaacgaaatctgaaacgcgagcttgtaagggcgcaagaggag 78369 Query: 284 gtcaagcggatccagtcggtgccgctcgtcat 315 |||||||| || ||||| ||||| |||||||| Sbjct: 78368 gtcaagcgcattcagtcagtgccactcgtcat 78337
>gb|AC007842.1|AC007842 Homo sapiens chromosome 19, BAC 331191 (CIT-B-471f3), complete sequence Length = 174009 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 376 caactactacgtgcgcatcctcagcaccatcaaccgcgagctgctcaagccc 427 |||||| || ||||||||||| ||||||||| | || ||||||||||||||| Sbjct: 92540 caactattatgtgcgcatcctgagcaccatcgatcgggagctgctcaagccc 92591
>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364 Length = 526707 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 224 gagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcaggaggag 283 |||||||||||||||||||| || ||||| |||||||| | | ||||| |||||| Sbjct: 82064 gagtacgtcaaggacgagcaacgaaatctgaaacgcgagcttgtaagggcgcaagaggag 82005 Query: 284 gtcaagcggatccagtcggtgccgctcgtcat 315 |||||||| || ||||| ||||| |||||||| Sbjct: 82004 gtcaagcgcattcagtcagtgccactcgtcat 81973
>gb|AF020736.1|AF020736 Homo sapiens ATPase homolog mRNA, complete cds Length = 1463 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 352 catcgtcggctccaccaccggcagcaactactacgtgcgcatcctcagcaccatcaaccg 411 |||||| ||||| ||||| ||| || ||| || ||||||||||| ||||||||| | || Sbjct: 343 catcgtgggctctaccacaggctccagctattatgtgcgcatcctgagcaccatcgatcg 402 Query: 412 cgagctgctcaagccc 427 ||||||||||||||| Sbjct: 403 ggagctgctcaagccc 418
>gb|U43398.1|STU43398 Solanum tuberosum POTATP1 mRNA, complete cds Length = 1473 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 275 caggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatg 334 ||||| || ||||| |||||||||||||||||| | || || || ||||||||||||||| Sbjct: 233 caggaagaagtcaaacggatccagtcggtgccgttagtaattggacagttcatggagatg 292
>gb|AC147002.20| Medicago truncatula clone mth2-151m16, complete sequence Length = 128621 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Minus Query: 224 gagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcaggaggag 283 ||||| ||||| || || || ||||| || || |||||||| || || || ||||| || Sbjct: 11205 gagtatgtcaaagatgaacaaaagaatctcaaacgcgagcttcttcgtgctcaggaagaa 11146 Query: 284 gtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatggt 336 ||||| |||||||| || || ||||| || ||||| ||||| ||||||||||| Sbjct: 11145 gtcaaacggatccaatctgttccgcttgtgatcggtcagtttatggagatggt 11093
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 251 ctgaagcgcgagctgctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctc 310 |||||||||||| || || | |||||||||||||| ||||| ||||| || || ||||| Sbjct: 1144225 ctgaagcgcgagttgttgagagcgcaggaggaggttaagcgcatccaatctgttccgctg 1144284 Query: 311 gtcatcggccagttcatggag 331 || || || |||||| ||||| Sbjct: 1144285 gttattggacagttcttggag 1144305
>ref|NM_211296.1| Eremothecium gossypii AFR394Wp (AFR394W), mRNA Length = 1419 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 251 ctgaagcgcgagctgctgcgcgcgcaggaggaggtcaagcggatccagtcggtgccgctc 310 |||||||||||| || || | |||||||||||||| ||||| ||||| || || ||||| Sbjct: 340 ctgaagcgcgagttgttgagagcgcaggaggaggttaagcgcatccaatctgttccgctg 399 Query: 311 gtcatcggccagttcatggag 331 || || || |||||| ||||| Sbjct: 400 gttattggacagttcttggag 420
>emb|AJ617238.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np487 Length = 189 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 275 caggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggagatg 334 ||||| || ||||| ||||| || ||||||||| | || ||||| ||||||||||||||| Sbjct: 62 caggaagaagtcaaacggattcaatcggtgccgttagtaatcggtcagttcatggagatg 121
>ref|NM_001008009.1| Xenopus tropicalis rpt3 protein (rpt3), mRNA Length = 1567 Score = 46.1 bits (23), Expect = 0.095 Identities = 35/39 (89%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaag 256 |||||||||||| | ||||| || ||||||||||||||| Sbjct: 353 caggaggagtacattaaggatgaacagaagaacctgaag 391
>gb|BC080888.1| Xenopus tropicalis rpt3 protein, mRNA (cDNA clone MGC:79492 IMAGE:6976743), complete cds Length = 1567 Score = 46.1 bits (23), Expect = 0.095 Identities = 35/39 (89%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaag 256 |||||||||||| | ||||| || ||||||||||||||| Sbjct: 353 caggaggagtacattaaggatgaacagaagaacctgaag 391
>gb|AF196476.1|AF196476 Mus musculus type III sodium-dependent phosphate transporter (Slc20a2) mRNA, complete cds Length = 2251 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 351 gcatcgtcggctccaccaccggc 373 ||||||||||||||||||||||| Sbjct: 609 gcatcgtcggctccaccaccggc 631
>ref|XM_368336.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00908.4) partial mRNA Length = 1266 Score = 44.1 bits (22), Expect = 0.38 Identities = 91/114 (79%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcag 277 |||||||| ||| ||||||| ||||||| || | ||||| ||||| |||| ||||| Sbjct: 169 caggaggaatacatcaaggatgagcagaggagtttaaagcgagagcttgtgcgtgcgcaa 228 Query: 278 gaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggag 331 |||||| ||||| |||| ||| || || || |||||||||||||| |||||| Sbjct: 229 gaggagatcaagaggattcagagcgttccactggtcatcggccagtttatggag 282
>ref|NM_125214.4| Arabidopsis thaliana RPT3; ATPase AT5G58290 (RPT3) mRNA, complete cds Length = 1518 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 320 cagttcatggagatggtcgacggcaacaacggcatcgtcgg 360 ||||||||||||||||| || ||||||||||||||||| Sbjct: 318 cagttcatggagatggtagatcagaacaacggcatcgtcgg 358
>gb|BT020373.1| Arabidopsis thaliana At5g58290 gene, complete cds Length = 1227 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 320 cagttcatggagatggtcgacggcaacaacggcatcgtcgg 360 ||||||||||||||||| || ||||||||||||||||| Sbjct: 241 cagttcatggagatggtagatcagaacaacggcatcgtcgg 281
>ref|XM_474329.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1878 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 ggagatggtcgacggcaacaa 348 ||||||||||||||||||||| Sbjct: 345 ggagatggtcgacggcaacaa 365
>ref|XM_547981.2| PREDICTED: Canis familiaris similar to likely ortholog of rat brain-enriched guanylate kinase-associated protein (LOC490859), mRNA Length = 2781 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 cgagctgctgcgcgcgcaggaggag 283 |||||||| |||||||||||||||| Sbjct: 1098 cgagctgcggcgcgcgcaggaggag 1122
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 ggagatggtcgacggcaacaa 348 ||||||||||||||||||||| Sbjct: 106329 ggagatggtcgacggcaacaa 106309
>gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds Length = 1950 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 320 cagttcatggagatggtcgacggcaacaacggcatcgtcgg 360 ||||||||||||||||| || ||||||||||||||||| Sbjct: 757 cagttcatggagatggtagatcagaacaacggcatcgtcgg 797
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 ggagatggtcgacggcaacaa 348 ||||||||||||||||||||| Sbjct: 34488844 ggagatggtcgacggcaacaa 34488824
>emb|BX831143.1|CNS09ZD2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 320 cagttcatggagatggtcgacggcaacaacggcatcgtcgg 360 ||||||||||||||||| || ||||||||||||||||| Sbjct: 289 cagttcatggagatggtagatcagaacaacggcatcgtcgg 329
>emb|BX831136.1|CNS09ZEE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1414 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 320 cagttcatggagatggtcgacggcaacaacggcatcgtcgg 360 ||||||||||||||||| || ||||||||||||||||| Sbjct: 271 cagttcatggagatggtagatcagaacaacggcatcgtcgg 311
>emb|BX831437.1|CNS09ZEY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1389 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 320 cagttcatggagatggtcgacggcaacaacggcatcgtcgg 360 ||||||||||||||||| || ||||||||||||||||| Sbjct: 346 cagttcatggagatggtagatcagaacaacggcatcgtcgg 386
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 agatggtcgacggcaacaacggcat 354 ||||||||||||||||||| ||||| Sbjct: 3705807 agatggtcgacggcaacaagggcat 3705783 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 agcgcgagctgctgcgcgcgc 275 ||||||||||||||||||||| Sbjct: 954991 agcgcgagctgctgcgcgcgc 954971
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 320 cagttcatggagatggtcgacggcaacaacggcatcgtcgg 360 ||||||||||||||||| || ||||||||||||||||| Sbjct: 42523 cagttcatggagatggtagatcagaacaacggcatcgtcgg 42563
>gb|AF123392.1|AF123392 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, complete cds Length = 1301 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 320 cagttcatggagatggtcgacggcaacaacggcatcgtcgg 360 ||||||||||||||||| || ||||||||||||||||| Sbjct: 282 cagttcatggagatggtagatcagaacaacggcatcgtcgg 322
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 ggagatggtcgacggcaacaa 348 ||||||||||||||||||||| Sbjct: 110374 ggagatggtcgacggcaacaa 110354
>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete sequence Length = 104146 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 ggagatggtcgacggcaacaa 348 ||||||||||||||||||||| Sbjct: 20707 ggagatggtcgacggcaacaa 20687
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 253 gaagcgcgagctgctgcgcgcgcag 277 ||||||||||| ||||||||||||| Sbjct: 2273219 gaagcgcgagccgctgcgcgcgcag 2273195
>gb|U16275.1|CSU16275 Comamonas sp. poly(hydroxyalkanoate) depolymerase precursor (phaZ) gene, complete cds Length = 1719 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 accggcagcaactactacgtg 388 ||||||||||||||||||||| Sbjct: 1616 accggcagcaactactacgtg 1636
>dbj|AB000508.1| Comamonas testosteroni DNA for poly(3-hydroxybutyrate) depolymerase precursor, complete cds Length = 2113 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 accggcagcaactactacgtg 388 ||||||||||||||||||||| Sbjct: 1694 accggcagcaactactacgtg 1714
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cgagctgctgcgcgcgcagg 278 |||||||||||||||||||| Sbjct: 48218 cgagctgctgcgcgcgcagg 48199
>ref|XM_369003.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00241.4) partial mRNA Length = 6306 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 agtacgtcaaggacgagcag 244 |||||||||||||||||||| Sbjct: 3956 agtacgtcaaggacgagcag 3975
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cggtgccgctcgtcatcggc 319 |||||||||||||||||||| Sbjct: 1813318 cggtgccgctcgtcatcggc 1813337
>gb|AY453853.1| Bacteriophage phi1026b, complete genome Length = 54865 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cggtgccgctcgtcatcggc 319 |||||||||||||||||||| Sbjct: 16326 cggtgccgctcgtcatcggc 16345
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tcggctccaccaccggcagc 376 |||||||||||||||||||| Sbjct: 56449 tcggctccaccaccggcagc 56430
>emb|AJ487081.4|TMO487081 Tenebrio molitor mRNA for chitinase (chit5 gene) Length = 8817 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcctcagcaccatcaaccgc 412 |||||||||||||||||||| Sbjct: 1823 tcctcagcaccatcaaccgc 1842
>gb|BC002607.2| Homo sapiens likely ortholog of rat brain-enriched guanylate kinase-associated protein, mRNA (cDNA clone MGC:2997 IMAGE:3161373), complete cds Length = 2723 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 cgagctgctgcgcgcgcaggagga 282 |||||||| ||||||||||||||| Sbjct: 195 cgagctgcggcgcgcgcaggagga 218
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 216 tccaggaggagtacgtcaaggacgagca 243 |||||||||||||| ||||||| ||||| Sbjct: 1871813 tccaggaggagtacatcaaggatgagca 1871840
>ref|NM_205476.1| Gallus gallus Na,K-ATPase alpha-2-subunit (LOC396468), mRNA Length = 3054 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcggagccgcagacgcgccccccg 50 |||||||||||||||||| ||||| Sbjct: 649 tcggagccgcagacgcgctccccg 672
>ref|NM_205475.1| Gallus gallus Na,K-ATPase alpha-3-subunit (LOC396467), mRNA Length = 3033 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcggagccgcagacgcgccccccg 50 |||||||||||||||||| ||||| Sbjct: 625 tcggagccgcagacgcgctccccg 648
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tcggctccaccaccggcagc 376 |||||||||||||||||||| Sbjct: 2554803 tcggctccaccaccggcagc 2554822
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 tgccgctcgtcatcggccagttca 326 ||||| |||||||||||||||||| Sbjct: 235392 tgccgatcgtcatcggccagttca 235369
>ref|NM_020836.2| Homo sapiens likely ortholog of rat brain-enriched guanylate kinase-associated protein (KIAA1446), mRNA Length = 2723 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 cgagctgctgcgcgcgcaggagga 282 |||||||| ||||||||||||||| Sbjct: 195 cgagctgcggcgcgcgcaggagga 218
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gctgctgcgcgcgcaggagg 281 |||||||||||||||||||| Sbjct: 2855830 gctgctgcgcgcgcaggagg 2855811
>gb|AF085185.1|AF085185 Acanthamoeba castellanii Myosin-IA (MIA) gene, complete cds Length = 6079 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 caggaggagtacgtcaagga 237 |||||||||||||||||||| Sbjct: 2464 caggaggagtacgtcaagga 2483
>dbj|AB241136.1| Azospirillum brasilense AraR, AraC, AraD, AraA, AraX, AraY, AraZ, AraB genes for transcriptional regulator, L-arabonate dehydratase, L-2-keto-3-deoxyarabonate dehydratase, L-arabinose 1-dehydrogenase, ABC-type sugar transport system periplasmic component, ABC-type sugar transport system ATPase component, ribose/xylose/arabinose/galactoside ABC-type transport system permease component, L-arabinolactonase, partial and complete cds Length = 8679 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cgagctgctgcgcgcgcagg 278 |||||||||||||||||||| Sbjct: 2413 cgagctgctgcgcgcgcagg 2394
>gb|U15601.1|ANU15601 Aspergillus niger 26S proteasome subunit (tbpA) gene, complete cds Length = 2120 Score = 40.1 bits (20), Expect = 5.9 Identities = 50/60 (83%) Strand = Plus / Plus Query: 272 gcgcaggaggaggtcaagcggatccagtcggtgccgctcgtcatcggccagttcatggag 331 |||||||| ||| |||||||||| ||| ||||| | || |||||||||||||||||| Sbjct: 562 gcgcaggaagagatcaagcggatacagagtgtgcctttggttatcggccagttcatggag 621
>gb|M59960.1|CHKNAKAT3 Chicken Na,K-ATPase alpha-3-subunit mRNA, complete cds Length = 3033 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcggagccgcagacgcgccccccg 50 |||||||||||||||||| ||||| Sbjct: 625 tcggagccgcagacgcgctccccg 648
>gb|M59959.1|CHKNAKAT2 Chicken NA,K-ATPase alpha-2-subunit mRNA, complete cds Length = 3054 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tcggagccgcagacgcgccccccg 50 |||||||||||||||||| ||||| Sbjct: 649 tcggagccgcagacgcgctccccg 672
>dbj|AB040879.1| Homo sapiens mRNA for KIAA1446 protein, partial cds Length = 5806 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 cgagctgctgcgcgcgcaggagga 282 |||||||| ||||||||||||||| Sbjct: 3331 cgagctgcggcgcgcgcaggagga 3354
>emb|AL845552.2|CNS08CBB Human chromosome 14 DNA sequence BAC C-2062F14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 130569 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 cgagctgctgcgcgcgcaggagga 282 |||||||| ||||||||||||||| Sbjct: 94139 cgagctgcggcgcgcgcaggagga 94116 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,284,051 Number of Sequences: 3902068 Number of extensions: 2284051 Number of successful extensions: 47379 Number of sequences better than 10.0: 153 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 46208 Number of HSP's gapped (non-prelim): 1146 length of query: 437 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 415 effective length of database: 17,147,199,772 effective search space: 7116087905380 effective search space used: 7116087905380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)