ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast41c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB024528.1| Halocynthia roretzi mitochondrial DNA, complete ... 559 e-156
2emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA ... 44 0.41
3emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, ... 44 0.41
4gb|AC122455.4| Mus musculus BAC clone RP24-263K11 from chromosom... 42 1.6
5gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomi... 42 1.6
6gb|AY327133.1| Pieris rapae NADH dehydrogenase subunit 5 (ND5) g... 42 1.6
7gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosom... 42 1.6
8gb|AC145165.9| Medicago truncatula clone mth2-4j24, complete seq... 42 1.6
9gb|AC149304.11| Medicago truncatula clone mth2-76g4, complete se... 42 1.6
10emb|AL670405.3| Human DNA sequence from clone RP13-148E24 on chr... 42 1.6
11emb|AL391280.15| Human DNA sequence from clone RP13-128O4 on chr... 42 1.6
12emb|AL356866.22| Human DNA sequence from clone RP11-211D10 on ch... 42 1.6
13dbj|AK134924.1| Mus musculus adult male olfactory brain cDNA, RI... 42 1.6
14dbj|AK135704.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 42 1.6
15dbj|AK160412.1| Mus musculus adult male cerebellum cDNA, RIKEN f... 42 1.6
16dbj|AK079078.1| Mus musculus adult male diencephalon cDNA, RIKEN... 42 1.6
17dbj|AK034687.1| Mus musculus 12 days embryo embryonic body betwe... 42 1.6
18gb|AC079245.35| Mus musculus strain C57BL/6J chromosome 9 clone ... 42 1.6
19emb|Z82255.1|HSU75A4 Human DNA sequence from clone LL0XNC01-75A4... 42 1.6
20dbj|AB044594.1| Pieris rapae mitochondrial ND5 gene for NADH deh... 42 1.6
21dbj|AB013161.1| Pieris rapae mitochondrial ND5 gene for NADH deh... 42 1.6
22gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome ... 40 6.3
23gb|AY962591.1| Candida metapsilosis strain MCO448 mitochondrion,... 40 6.3
24ref|XM_717404.1| Candida albicans SC5314 hypothetical protein (C... 40 6.3
25ref|XM_717265.1| Candida albicans SC5314 hypothetical protein (C... 40 6.3
26gb|AC104872.8| Mus musculus chromosome 12, clone RP23-360C2, com... 40 6.3
27ref|XM_725601.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.3
28gb|AC102692.6| Mus musculus chromosome 18, clone RP24-491K18, co... 40 6.3
29gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp... 40 6.3
30gb|AC157984.17| Medicago truncatula clone mth2-142a1, complete s... 40 6.3
31gb|AC139853.17| Medicago truncatula clone mth2-13d20, complete s... 40 6.3
32emb|CR318668.11| Zebrafish DNA sequence from clone DKEYP-100A5 i... 40 6.3
33gb|AY275311.1| Metylophorus novaescotiae 12S ribosomal RNA gene,... 40 6.3
34emb|AL137848.5| Human DNA sequence from clone RP11-77D6 on chrom... 40 6.3
35emb|AL121939.12|HSDJ223E3 Human DNA sequence from clone RP1-223E... 40 6.3
36gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 6.3
37gb|AC152349.11| Medicago truncatula clone mth2-52p10, complete s... 40 6.3
38gb|AC007167.5| Arabidopsis thaliana chromosome 2 clone F3C11 map... 40 6.3
39gb|AC091908.3| Homo sapiens chromosome 5 clone RP11-202F17, comp... 40 6.3
40gb|AC091996.3| Homo sapiens chromosome 5 clone RP11-96G10, compl... 40 6.3
41gb|AY055726.2| Mus musculus synovial sarcoma associated SS18 (Ss... 40 6.3
42gb|AC008213.4|AC008213 Drosophila melanogaster, chromosome 3R, r... 40 6.3
43gb|AC005813.13|AC005813 Drosophila melanogaster, chromosome 3R, ... 40 6.3
44gb|AC179924.2| Mus musculus BAC clone RP23-270O20 from chromosom... 40 6.3
45dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
46gb|AC074360.5|AC074360 Arabidopsis thaliana chromosome 1 BAC F27... 40 6.3
47gb|AC027135.6|AC027135 Arabidopsis thaliana chromosome 1 BAC T8E... 40 6.3
48gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Ca... 40 6.3
49gb|AC093794.2| Homo sapiens BAC clone RP11-288L10 from 2, comple... 40 6.3
50gb|AC011807.4|AC011807 Arabidopsis thaliana chromosome I BAC F14... 40 6.3
51gb|AC012443.8| Homo sapiens BAC clone RP11-17G11 from 2, complet... 40 6.3
52gb|AC159142.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 6.3
53gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94... 40 6.3
54emb|AL953884.15| Zebrafish DNA sequence from clone CH211-207L13 ... 40 6.3
55gb|BT001777.1| Drosophila melanogaster RH14203 full insert cDNA 40 6.3
56gb|U92211.1|LMU92211 Legionella maceachernii macrophage infectiv... 40 6.3
57gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
58emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.3
59emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.3
60emb|CT030697.6| Mouse DNA sequence from clone RP23-274A4 on chro... 40 6.3
61gb|AF059362.1|AF059362 Gossypium bickii plant number Gos5048 alc... 40 6.3
62gb|AF059361.1|AF059361 Gossypium bickii plant number PI464843 al... 40 6.3
63gb|AF059360.1|AF059360 Gossypium bickii plant number LC9360 alco... 40 6.3
64gb|AC145915.3| Gallus gallus BAC clone CH261-80C14 from chromoso... 40 6.3
65gb|AC124750.5| Mus musculus BAC clone RP23-273A20 from 8, comple... 40 6.3
66emb|AL845426.9| Mouse DNA sequence from clone RP23-289M11 on chr... 40 6.3
67emb|BX897750.11| Zebrafish DNA sequence from clone DKEY-278N18, ... 40 6.3
68dbj|AP006397.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.3
69emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chr... 40 6.3 
>dbj|AB024528.1| Halocynthia roretzi mitochondrial DNA, complete genome
          Length = 14771

 Score =  559 bits (282), Expect = e-156
 Identities = 318/331 (96%), Gaps = 1/331 (0%)
 Strand = Plus / Plus

                                                                         
Query: 18    gtgtatttaattcattttttgtttggtatttgtgaaagagtgttgtannnnnnnaatagt 77
             |||||||||||||||||||||||||||||||||||||||||||||||       ||||||
Sbjct: 12009 gtgtatttaattcattttttgtttggtatttgtgaaagagtgttgtatttttttaatagt 12068

                                                                         
Query: 78    gatagaataaggtgtttgtttgggtataataagtttagtacttttgccttttgtataatg 137
             |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 12069 gatagaataaggtgtttgtttgggtata-taagtttagttcttttgccttttgtataatg 12127

                                                                         
Query: 138   acttagtgagtataaacaatgtttaattggtacattgaagtaagttgatttatttttagt 197
             |||||||||||||||| ||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 12128 acttagtgagtataaagaatgtttaactggtacagtgatgtaagttgatttatttttagt 12187

                                                                         
Query: 198   tgataacttaatagttgaaattttaggtttgtaagaataggagtgatatgtgaatcgaaa 257
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12188 tgataacttaatagttgaaattttaggtttgtaagaataggagtgatatgtgaatcgaaa 12247

                                                                         
Query: 258   cttaggatagctagttattattgataaagagtaattttgttacgtcggtttgatttaggg 317
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12248 cttaggatagctagttattattgataaagagtaattttgttacgtcggtttgatttaggg 12307

                                            
Query: 318   acagcttaaatcaatggaaattatgggcttg 348
             |||||||||||||||||||||||||||||||
Sbjct: 12308 acagcttaaatcaatggaaattatgggcttg 12338



 Score =  174 bits (88), Expect = 2e-40
 Identities = 91/92 (98%)
 Strand = Plus / Plus

                                                                         
Query: 378   aagtgttggttggtattgttataaatagtaattataatgctaagatgagtataagtgtat 437
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 12367 aagtgttggttggtattgttataagtagtaattataatgctaagatgagtataagtgtat 12426

                                             
Query: 438   ttgatttaatggtaagttgaaatgtgttttat 469
             ||||||||||||||||||||||||||||||||
Sbjct: 12427 ttgatttaatggtaagttgaaatgtgttttat 12458
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>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2
          Length = 202860

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 21    tatttaattcattttttgtttg 42
             ||||||||||||||||||||||
Sbjct: 33490 tatttaattcattttttgtttg 33511
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>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39
          Length = 197976

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 21     tatttaattcattttttgtttg 42
              ||||||||||||||||||||||
Sbjct: 171920 tatttaattcattttttgtttg 171941
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>gb|AC122455.4| Mus musculus BAC clone RP24-263K11 from chromosome 8, complete
            sequence
          Length = 148213

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 393  ttgttataaatagtaattata 413
            |||||||||||||||||||||
Sbjct: 5803 ttgttataaatagtaattata 5823
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>gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomic sequence, complete
             sequence
          Length = 91755

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 154   caatgtttaattggtacattgaagt 178
             |||||| ||||||||||||||||||
Sbjct: 32111 caatgtgtaattggtacattgaagt 32087
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>gb|AY327133.1| Pieris rapae NADH dehydrogenase subunit 5 (ND5) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 650

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 178 taagttgatttatttttagtt 198
           |||||||||||||||||||||
Sbjct: 519 taagttgatttatttttagtt 539
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>gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosome 9, complete sequence
          Length = 181083

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 188    tatttttagttgataacttaatagt 212
              ||||||||||| |||||||||||||
Sbjct: 171376 tatttttagttaataacttaatagt 171352
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>gb|AC145165.9| Medicago truncatula clone mth2-4j24, complete sequence
          Length = 128074

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    gtatttaattcattttttgtt 40
             |||||||||||||||||||||
Sbjct: 73162 gtatttaattcattttttgtt 73142
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>gb|AC149304.11| Medicago truncatula clone mth2-76g4, complete sequence
          Length = 114831

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 21   tatttaattcattttttgttt 41
            |||||||||||||||||||||
Sbjct: 5885 tatttaattcattttttgttt 5905
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>emb|AL670405.3| Human DNA sequence from clone RP13-148E24 on chromosome X, complete
             sequence
          Length = 144353

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    tatttaattcattttttgttt 41
             |||||||||||||||||||||
Sbjct: 15387 tatttaattcattttttgttt 15407
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>emb|AL391280.15| Human DNA sequence from clone RP13-128O4 on chromosome X Contains the 3'
              end of the gene for a novel protein similar to zizimin1
              (FLJ32122), the IL13RA1 gene for interleukin 13 receptor,
              alpha 1 (NR4, IL-13RA, IL-13Ra), a novel pseudogene and a
              CpG island, complete sequence
          Length = 153026

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     ttcattttttgtttggtattt 48
              |||||||||||||||||||||
Sbjct: 112944 ttcattttttgtttggtattt 112964
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>emb|AL356866.22| Human DNA sequence from clone RP11-211D10 on chromosome 13 Contains a CpG
              island, complete sequence
          Length = 182321

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 21     tatttaattcattttttgttt 41
              |||||||||||||||||||||
Sbjct: 103325 tatttaattcattttttgttt 103345
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>dbj|AK134924.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430519A17
           product:unclassifiable, full insert sequence
          Length = 1923

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 393 ttgttataaatagtaattata 413
           |||||||||||||||||||||
Sbjct: 715 ttgttataaatagtaattata 735
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>dbj|AK135704.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420405B20 product:bone
            morphogenetic protein 5, full insert sequence
          Length = 2033

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 188  tatttttagttgataacttaatagt 212
            ||||||||||| |||||||||||||
Sbjct: 1853 tatttttagttaataacttaatagt 1877
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>dbj|AK160412.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
            library, clone:1500034B01 product:bone morphogenetic
            protein 5, full insert sequence
          Length = 2929

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 188  tatttttagttgataacttaatagt 212
            ||||||||||| |||||||||||||
Sbjct: 2793 tatttttagttaataacttaatagt 2817
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>dbj|AK079078.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330158F20 product:unclassifiable, full
            insert sequence
          Length = 4584

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 188  tatttttagttgataacttaatagt 212
            ||||||||||| |||||||||||||
Sbjct: 2253 tatttttagttaataacttaatagt 2229
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>dbj|AK034687.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430024M13 product:bone morphogenetic protein 5,
            full insert sequence
          Length = 1596

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 188  tatttttagttgataacttaatagt 212
            ||||||||||| |||||||||||||
Sbjct: 1460 tatttttagttaataacttaatagt 1484
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>gb|AC079245.35| Mus musculus strain C57BL/6J chromosome 9 clone rp23-426k2, complete
              sequence
          Length = 213098

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 188    tatttttagttgataacttaatagt 212
              ||||||||||| |||||||||||||
Sbjct: 103119 tatttttagttaataacttaatagt 103143
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>emb|Z82255.1|HSU75A4 Human DNA sequence from clone LL0XNC01-75A4 on chromosome X, complete
             sequence
          Length = 39132

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    tatttaattcattttttgttt 41
             |||||||||||||||||||||
Sbjct: 38967 tatttaattcattttttgttt 38987
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>dbj|AB044594.1| Pieris rapae mitochondrial ND5 gene for NADH dehydrogenase subunit
           5, partial cds
          Length = 877

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 178 taagttgatttatttttagtt 198
           |||||||||||||||||||||
Sbjct: 631 taagttgatttatttttagtt 651
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>dbj|AB013161.1| Pieris rapae mitochondrial ND5 gene for NADH dehydrogenase subunit
           5, partial cds
          Length = 817

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 178 taagttgatttatttttagtt 198
           |||||||||||||||||||||
Sbjct: 652 taagttgatttatttttagtt 672
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>gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome 8, complete sequence
          Length = 240812

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    gttgatttatttttagttga 200
              ||||||||||||||||||||
Sbjct: 228676 gttgatttatttttagttga 228695
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>gb|AY962591.1| Candida metapsilosis strain MCO448 mitochondrion, complete genome
          Length = 24152

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   gtataaacaatgtttaattg 166
             ||||||||||||||||||||
Sbjct: 15404 gtataaacaatgtttaattg 15423
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>ref|XM_717404.1| Candida albicans SC5314 hypothetical protein (CaO19_1447), mRNA
          Length = 1617

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 acattgaagtaagttgattt 188
           ||||||||||||||||||||
Sbjct: 526 acattgaagtaagttgattt 507
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>ref|XM_717265.1| Candida albicans SC5314 hypothetical protein (CaO19_9022), mRNA
          Length = 1617

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 acattgaagtaagttgattt 188
           ||||||||||||||||||||
Sbjct: 526 acattgaagtaagttgattt 507
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>gb|AC104872.8| Mus musculus chromosome 12, clone RP23-360C2, complete sequence
          Length = 196850

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    ttataaatagtaattataat 415
              ||||||||||||||||||||
Sbjct: 137737 ttataaatagtaattataat 137756
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>ref|XM_725601.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02772)
           partial mRNA
          Length = 1273

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 396 ttataaatagtaattataat 415
           ||||||||||||||||||||
Sbjct: 503 ttataaatagtaattataat 522
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>gb|AC102692.6| Mus musculus chromosome 18, clone RP24-491K18, complete sequence
          Length = 225042

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     taaggtgtttgtttgggtat 104
              ||||||||||||||||||||
Sbjct: 150175 taaggtgtttgtttgggtat 150156
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>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tatttaattcattttttgtt 40
             ||||||||||||||||||||
Sbjct: 97189 tatttaattcattttttgtt 97208
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>gb|AC157984.17| Medicago truncatula clone mth2-142a1, complete sequence
          Length = 122915

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     tatttaattcattttttgtt 40
              ||||||||||||||||||||
Sbjct: 117352 tatttaattcattttttgtt 117371
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>gb|AC139853.17| Medicago truncatula clone mth2-13d20, complete sequence
          Length = 93375

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    tatttaattcattttttgtt 40
             ||||||||||||||||||||
Sbjct: 82100 tatttaattcattttttgtt 82081
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>emb|CR318668.11| Zebrafish DNA sequence from clone DKEYP-100A5 in linkage group 23,
             complete sequence
          Length = 100689

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 400   aaatagtaattataatgcta 419
             ||||||||||||||||||||
Sbjct: 86707 aaatagtaattataatgcta 86688
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>gb|AY275311.1| Metylophorus novaescotiae 12S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 364

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 185 atttatttttagttgataacttaa 208
           |||||||||||||| |||||||||
Sbjct: 256 atttatttttagtttataacttaa 279
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>emb|AL137848.5| Human DNA sequence from clone RP11-77D6 on chromosome 9q31.1-32
             Contains part of a novel gene, the OGN gene for
             osteoglycin (osteoinductive factor, mimecan), the OMD gene
             for osteomodulin, the ASPN gene for asporin (LRR class 1)
             and the 3' end of the ECM2 gene for extracellular matrix
             protein 2 (female organ and adipocyte specific), complete
             sequence
          Length = 152341

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   tataaacaatgtttaattgg 167
             ||||||||||||||||||||
Sbjct: 93221 tataaacaatgtttaattgg 93202
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>emb|AL121939.12|HSDJ223E3 Human DNA sequence from clone RP1-223E3 on chromosome 6q13-15 Contains
             the gene for a novel protein similar to serine protease 23
             (PRSS23, ZSIG13), complete sequence
          Length = 59621

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 430   aagtgtatttgatttaatgg 449
             ||||||||||||||||||||
Sbjct: 24568 aagtgtatttgatttaatgg 24587
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    ttgttataaatagtaattat 412
              ||||||||||||||||||||
Sbjct: 942838 ttgttataaatagtaattat 942857
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>gb|AC152349.11| Medicago truncatula clone mth2-52p10, complete sequence
          Length = 105433

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tatttaattcattttttgtt 40
             ||||||||||||||||||||
Sbjct: 84182 tatttaattcattttttgtt 84201
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>gb|AC007167.5| Arabidopsis thaliana chromosome 2 clone F3C11 map mi310, complete
             sequence
          Length = 103874

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    tatttaattcattttttgtttggt 44
             ||||| ||||||||||||||||||
Sbjct: 48897 tatttgattcattttttgtttggt 48874
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>gb|AC091908.3| Homo sapiens chromosome 5 clone RP11-202F17, complete sequence
          Length = 37914

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tttaattcattttttgtttg 42
             ||||||||||||||||||||
Sbjct: 13694 tttaattcattttttgtttg 13713
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>gb|AC091996.3| Homo sapiens chromosome 5 clone RP11-96G10, complete sequence
          Length = 182797

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     tttaattcattttttgtttg 42
              ||||||||||||||||||||
Sbjct: 181678 tttaattcattttttgtttg 181697
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>gb|AY055726.2| Mus musculus synovial sarcoma associated SS18 (Ss18) gene, complete
             cds, alternatively spliced
          Length = 64533

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    taaggtgtttgtttgggtat 104
             ||||||||||||||||||||
Sbjct: 27278 taaggtgtttgtttgggtat 27259
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>gb|AC008213.4|AC008213 Drosophila melanogaster, chromosome 3R, region 97B-97B, BAC clone
             BACR15K06, complete sequence
          Length = 183370

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 397   tataaatagtaattataatgctaa 420
             |||||||| |||||||||||||||
Sbjct: 98212 tataaatattaattataatgctaa 98235
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>gb|AC005813.13|AC005813 Drosophila melanogaster, chromosome 3R, region 97B2-97B9, BAC clone
             BACR48G23, complete sequence
          Length = 166543

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 397   tataaatagtaattataatgctaa 420
             |||||||| |||||||||||||||
Sbjct: 55345 tataaatattaattataatgctaa 55368
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>gb|AC179924.2| Mus musculus BAC clone RP23-270O20 from chromosome 12, complete
             sequence
          Length = 217229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   ttataaatagtaattataat 415
             ||||||||||||||||||||
Sbjct: 20087 ttataaatagtaattataat 20068
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 108      aagtttagtacttttgccttttgt 131
                |||||||| |||||||||||||||
Sbjct: 12417094 aagtttagaacttttgccttttgt 12417071
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>gb|AC074360.5|AC074360 Arabidopsis thaliana chromosome 1 BAC F27M3 genomic sequence, complete
             sequence
          Length = 110664

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   tgataaagagtaattttgtt 298
             ||||||||||||||||||||
Sbjct: 77401 tgataaagagtaattttgtt 77420
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>gb|AC027135.6|AC027135 Arabidopsis thaliana chromosome 1 BAC T8E3 genomic sequence, complete
             sequence
          Length = 80139

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   tgataaagagtaattttgtt 298
             ||||||||||||||||||||
Sbjct: 64693 tgataaagagtaattttgtt 64674
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>gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 160095

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 312    ttagggacagcttaaatcaatggaaatt 339
              ||||| |||||| |||||||||||||||
Sbjct: 126139 ttaggcacagctgaaatcaatggaaatt 126166
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>gb|AC093794.2| Homo sapiens BAC clone RP11-288L10 from 2, complete sequence
          Length = 31426

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    attttttgtttggtatttgt 50
             ||||||||||||||||||||
Sbjct: 30881 attttttgtttggtatttgt 30900
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>gb|AC011807.4|AC011807 Arabidopsis thaliana chromosome I BAC F14J22 genomic sequence, complete
             sequence
          Length = 104679

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 23    tttaattcattttttgtttggtat 46
             ||||||| ||||||||||||||||
Sbjct: 56938 tttaatttattttttgtttggtat 56915
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>gb|AC012443.8| Homo sapiens BAC clone RP11-17G11 from 2, complete sequence
          Length = 153610

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   attttttgtttggtatttgt 50
            ||||||||||||||||||||
Sbjct: 1455 attttttgtttggtatttgt 1474
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>gb|AC159142.2| Medicago truncatula chromosome 2 BAC clone mth2-145o9, complete
             sequence
          Length = 107765

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tatttaattcattttttgtt 40
             ||||||||||||||||||||
Sbjct: 50911 tatttaattcattttttgtt 50930
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>gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94 of 118 of the complete
              sequence
          Length = 322332

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 397    tataaatagtaattataatgctaa 420
              |||||||| |||||||||||||||
Sbjct: 159105 tataaatattaattataatgctaa 159128
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>emb|AL953884.15| Zebrafish DNA sequence from clone CH211-207L13 in linkage group 14,
              complete sequence
          Length = 201115

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 80     tagaataaggtgtttgtttgggtataat 107
              ||||||||||||| ||||||| ||||||
Sbjct: 160734 tagaataaggtgtgtgtttggatataat 160707
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>gb|BT001777.1| Drosophila melanogaster RH14203 full insert cDNA
          Length = 1684

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 397 tataaatagtaattataatgctaa 420
           |||||||| |||||||||||||||
Sbjct: 253 tataaatattaattataatgctaa 276
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>gb|U92211.1|LMU92211 Legionella maceachernii macrophage infectivity potentiator (mip)
           gene, complete cds
          Length = 1187

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 422 atgagtataagtgtatttgattta 445
           |||||||| |||||||||||||||
Sbjct: 164 atgagtatcagtgtatttgattta 141
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 108      aagtttagtacttttgccttttgt 131
                |||||||| |||||||||||||||
Sbjct: 12371464 aagtttagaacttttgccttttgt 12371441
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>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 163702

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 108    aagtttagtacttttgccttttgt 131
              |||||||| |||||||||||||||
Sbjct: 131459 aagtttagaacttttgccttttgt 131436
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>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132241

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 108   aagtttagtacttttgccttttgt 131
             |||||||| |||||||||||||||
Sbjct: 18572 aagtttagaacttttgccttttgt 18549
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>emb|CT030697.6| Mouse DNA sequence from clone RP23-274A4 on chromosome 12, complete
              sequence
          Length = 198527

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    ttataaatagtaattataat 415
              ||||||||||||||||||||
Sbjct: 111469 ttataaatagtaattataat 111450
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>gb|AF059362.1|AF059362 Gossypium bickii plant number Gos5048 alcohol dehydrogenase D (AdhD)
            gene, exons 2 through 8 and partial cds
          Length = 1592

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  ataataagtttagtactttt 122
            ||||||||||||||||||||
Sbjct: 1155 ataataagtttagtactttt 1174
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>gb|AF059361.1|AF059361 Gossypium bickii plant number PI464843 alcohol dehydrogenase D (AdhD)
            gene, exons 2 through 8 and partial cds
          Length = 1595

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  ataataagtttagtactttt 122
            ||||||||||||||||||||
Sbjct: 1155 ataataagtttagtactttt 1174
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>gb|AF059360.1|AF059360 Gossypium bickii plant number LC9360 alcohol dehydrogenase D (AdhD)
            gene, exons 2 through 8 and partial cds
          Length = 1594

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  ataataagtttagtactttt 122
            ||||||||||||||||||||
Sbjct: 1154 ataataagtttagtactttt 1173
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>gb|AC145915.3| Gallus gallus BAC clone CH261-80C14 from chromosome unknown, complete
             sequence
          Length = 196034

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    aatagtgatagaataaggtg 91
             ||||||||||||||||||||
Sbjct: 24540 aatagtgatagaataaggtg 24521
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>gb|AC124750.5| Mus musculus BAC clone RP23-273A20 from 8, complete sequence
          Length = 215042

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   gttgatttatttttagttga 200
             ||||||||||||||||||||
Sbjct: 84510 gttgatttatttttagttga 84529
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>emb|AL845426.9| Mouse DNA sequence from clone RP23-289M11 on chromosome 2, complete
              sequence
          Length = 181434

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    aatagttgaaattttaggtt 226
              ||||||||||||||||||||
Sbjct: 125842 aatagttgaaattttaggtt 125861
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>emb|BX897750.11| Zebrafish DNA sequence from clone DKEY-278N18, complete sequence
          Length = 182033

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   aatagtaattataatgctaa 420
             ||||||||||||||||||||
Sbjct: 21665 aatagtaattataatgctaa 21646
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>dbj|AP006397.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280a,
             complete sequence
          Length = 47722

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   ccttttgtataatgacttag 143
             ||||||||||||||||||||
Sbjct: 24299 ccttttgtataatgacttag 24318
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>emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chromosome 2, complete
              sequence
          Length = 210427

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     atttaattcattttttgttt 41
              ||||||||||||||||||||
Sbjct: 123647 atttaattcattttttgttt 123666


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,900,473
Number of Sequences: 3902068
Number of extensions: 5900473
Number of successful extensions: 139961
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139654
Number of HSP's gapped (non-prelim): 305
length of query: 469
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 447
effective length of database: 17,147,199,772
effective search space: 7664798298084
effective search space used: 7664798298084
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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