| Clone Name | bast41b10 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 68.9 bits (167), Expect = 5e-12 Identities = 37/98 (37%), Positives = 47/98 (47%) Frame = +3 Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332 LY+ IGKKA+DLL RDY KK + + ++Q+Q+K KN T Sbjct: 6 LYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNIT 65 Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446 VDVKA +L PGLK +LS P QKS Sbjct: 66 VDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKS 103
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 68.6 bits (166), Expect = 7e-12 Identities = 37/98 (37%), Positives = 46/98 (46%) Frame = +3 Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332 LY DIGKK RDLL +DY +KNE+I +L TQ+K K T Sbjct: 7 LYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLT 66 Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446 VDVKA E PGLK +++L P Q+S Sbjct: 67 VDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRS 104
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 67.8 bits (164), Expect = 1e-11 Identities = 39/98 (39%), Positives = 47/98 (47%) Frame = +3 Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332 LY +IGKKARDLL RDY KK + I ++Q+Q+K KN T Sbjct: 5 LYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNIT 64 Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446 VDVKA EL PGLK +LS P Q+S Sbjct: 65 VDVKANSDSNVVTTVTVDEL-TPGLKSILSFAVPDQRS 101
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 66.2 bits (160), Expect = 3e-11 Identities = 39/98 (39%), Positives = 44/98 (44%) Frame = +3 Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332 LY+DIGKKARDLL RDY KK E L+D+ TQ+K KN T Sbjct: 6 LYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNIT 65 Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446 DVK E PGLK + S P QKS Sbjct: 66 TDVKVDTNSNVYTTITVDEPA-PGLKTIFSFVVPDQKS 102
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 62.8 bits (151), Expect = 4e-10 Identities = 36/98 (36%), Positives = 42/98 (42%) Frame = +3 Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332 LY DIGKKARDLL +DY KK E L D+ TQ+K KN T Sbjct: 6 LYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNIT 65 Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446 D+K E PG+K +LS P Q S Sbjct: 66 TDIKVDTNSNLFTTITVNEPA-PGVKAILSFKVPEQTS 102
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 61.6 bits (148), Expect = 8e-10 Identities = 35/98 (35%), Positives = 44/98 (44%) Frame = +3 Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332 LY +IGKKARDLL +DY KK + L+D+ TQ+K KN T Sbjct: 6 LYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVT 65 Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446 D+K E PGLK +LS P Q+S Sbjct: 66 TDIKVDTNSNLFTTITVDE-AAPGLKTILSFRVPDQRS 102
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 57.4 bits (137), Expect = 2e-08 Identities = 34/98 (34%), Positives = 39/98 (39%) Frame = +3 Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332 LY +IGKKARDLL RDY K L D+ TQ+K NFT Sbjct: 6 LYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFT 65 Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446 DVK E PGLK ++ P KS Sbjct: 66 ADVKVSTDSSLLTTLTFDEPA-PGLKVIVQAKLPDHKS 102
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 52.4 bits (124), Expect = 5e-07 Identities = 30/98 (30%), Positives = 40/98 (40%) Frame = +3 Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332 LY +IGKKARDLL +D+ KK + +L D+ Q + KN T Sbjct: 6 LYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNIT 65 Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446 D+K E PGL+ + S P Q S Sbjct: 66 TDLKVCTDSTFLITATVDE-AAPGLRSIFSFKVPDQNS 102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,165,482 Number of Sequences: 219361 Number of extensions: 399346 Number of successful extensions: 1222 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1191 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)