ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast41b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin ... 69 5e-12
2VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Vol... 69 7e-12
3VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin ... 68 1e-11
4VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein... 66 3e-11
5VDAC_PEA (P42054) Outer plastidial membrane protein porin (Volta... 63 4e-10
6VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein... 62 8e-10
7VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin ... 57 2e-08
8VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin ... 52 5e-07

>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 37/98 (37%), Positives = 47/98 (47%)
 Frame = +3

Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332
           LY+ IGKKA+DLL RDY                       KK +  + ++Q+Q+K KN T
Sbjct: 6   LYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNIT 65

Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446
           VDVKA             +L  PGLK +LS   P QKS
Sbjct: 66  VDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKS 103



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>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 277

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 37/98 (37%), Positives = 46/98 (46%)
 Frame = +3

Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332
           LY DIGKK RDLL +DY                       +KNE+I  +L TQ+K K  T
Sbjct: 7   LYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLT 66

Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446
           VDVKA             E   PGLK +++L  P Q+S
Sbjct: 67  VDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRS 104



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>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 273

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 39/98 (39%), Positives = 47/98 (47%)
 Frame = +3

Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332
           LY +IGKKARDLL RDY                       KK + I  ++Q+Q+K KN T
Sbjct: 5   LYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNIT 64

Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446
           VDVKA             EL  PGLK +LS   P Q+S
Sbjct: 65  VDVKANSDSNVVTTVTVDEL-TPGLKSILSFAVPDQRS 101



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>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 36)
          Length = 275

 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 39/98 (39%), Positives = 44/98 (44%)
 Frame = +3

Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332
           LY+DIGKKARDLL RDY                       KK E  L+D+ TQ+K KN T
Sbjct: 6   LYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNIT 65

Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446
            DVK              E   PGLK + S   P QKS
Sbjct: 66  TDVKVDTNSNVYTTITVDEPA-PGLKTIFSFVVPDQKS 102



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>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 275

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 36/98 (36%), Positives = 42/98 (42%)
 Frame = +3

Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332
           LY DIGKKARDLL +DY                       KK E  L D+ TQ+K KN T
Sbjct: 6   LYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNIT 65

Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446
            D+K              E   PG+K +LS   P Q S
Sbjct: 66  TDIKVDTNSNLFTTITVNEPA-PGVKAILSFKVPEQTS 102



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>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 34)
          Length = 275

 Score = 61.6 bits (148), Expect = 8e-10
 Identities = 35/98 (35%), Positives = 44/98 (44%)
 Frame = +3

Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332
           LY +IGKKARDLL +DY                       KK +  L+D+ TQ+K KN T
Sbjct: 6   LYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVT 65

Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446
            D+K              E   PGLK +LS   P Q+S
Sbjct: 66  TDIKVDTNSNLFTTITVDE-AAPGLKTILSFRVPDQRS 102



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>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 273

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 34/98 (34%), Positives = 39/98 (39%)
 Frame = +3

Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332
           LY +IGKKARDLL RDY                        K    L D+ TQ+K  NFT
Sbjct: 6   LYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFT 65

Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446
            DVK              E   PGLK ++    P  KS
Sbjct: 66  ADVKVSTDSSLLTTLTFDEPA-PGLKVIVQAKLPDHKS 102



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>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1|
           (Voltage-dependent anion-selective channel protein 1)
           (VDAC 1)
          Length = 275

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 30/98 (30%), Positives = 40/98 (40%)
 Frame = +3

Query: 153 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQMKIKNFT 332
           LY +IGKKARDLL +D+                       KK + +L D+  Q + KN T
Sbjct: 6   LYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNIT 65

Query: 333 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKS 446
            D+K              E   PGL+ + S   P Q S
Sbjct: 66  TDLKVCTDSTFLITATVDE-AAPGLRSIFSFKVPDQNS 102


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,165,482
Number of Sequences: 219361
Number of extensions: 399346
Number of successful extensions: 1222
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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