ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast41b04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190406.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 573 Score = 339 bits (171), Expect = 5e-90 Identities = 313/359 (87%), Gaps = 6/359 (1%) Strand = Plus / Plus Query: 115 gagccgctgctcccggagttctcgggcgggcacggcggcggggcgtcggtctccggcgcg 174 ||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||| Sbjct: 58 gagccgctgctgccggagttctctggcgg---cgggcatggggcgtcggtctccggcgcg 114 Query: 175 gtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcccggcggcaatg 234 ||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 115 gtgttcaacgtgtcgacgagcatcatcggcgccggaatcatgtcaatcccggcggcaatg 174 Query: 235 cgcgtcctcggggtcgtccccgcgctcgtcctcatcgcggccgccgccctcctctccgac 294 || || ||||| || ||||||||||| |||||||||| ||| |||| || |||||| Sbjct: 175 cgggtgctcggtgtgctccccgcgctcctcctcatcgccaccgtcgccgcgctgtccgac 234 Query: 295 gtctccgtggagttcatgctccggtacacgggctgggccagcggcccgccctcgtacgcg 354 | ||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||| Sbjct: 235 gcctccgtggaattcatgctgcggtacacgggctgggacagcggcccgccgtcgtacgcc 294 Query: 355 gggatcatgggcgacgcgttcggccgccgcgccggcgccgccgcgctgaacgtcttcata 414 |||||||||||||||||||||| |||||||||||||| ||||| || |||| ||| Sbjct: 295 gggatcatgggcgacgcgttcg---gccgcgccggcgccaaggcgctcaatgtctgcatc 351 Query: 415 gccttcaccaccgccggcaccctcgtcgtctacctcatcatcataggggacgtgctgtc 473 |||||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 352 gccttcaccaccacgggcaccctcgtcgtctacctcatcatcatcggggatgtgctgtc 410
>dbj|AK102220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L14, full insert sequence Length = 1580 Score = 339 bits (171), Expect = 5e-90 Identities = 313/359 (87%), Gaps = 6/359 (1%) Strand = Plus / Plus Query: 115 gagccgctgctcccggagttctcgggcgggcacggcggcggggcgtcggtctccggcgcg 174 ||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||| Sbjct: 85 gagccgctgctgccggagttctctggcgg---cgggcatggggcgtcggtctccggcgcg 141 Query: 175 gtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcccggcggcaatg 234 ||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 142 gtgttcaacgtgtcgacgagcatcatcggcgccggaatcatgtcaatcccggcggcaatg 201 Query: 235 cgcgtcctcggggtcgtccccgcgctcgtcctcatcgcggccgccgccctcctctccgac 294 || || ||||| || ||||||||||| |||||||||| ||| |||| || |||||| Sbjct: 202 cgggtgctcggtgtgctccccgcgctcctcctcatcgccaccgtcgccgcgctgtccgac 261 Query: 295 gtctccgtggagttcatgctccggtacacgggctgggccagcggcccgccctcgtacgcg 354 | ||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||| Sbjct: 262 gcctccgtggaattcatgctgcggtacacgggctgggacagcggcccgccgtcgtacgcc 321 Query: 355 gggatcatgggcgacgcgttcggccgccgcgccggcgccgccgcgctgaacgtcttcata 414 |||||||||||||||||||||| |||||||||||||| ||||| || |||| ||| Sbjct: 322 gggatcatgggcgacgcgttcg---gccgcgccggcgccaaggcgctcaatgtctgcatc 378 Query: 415 gccttcaccaccgccggcaccctcgtcgtctacctcatcatcataggggacgtgctgtc 473 |||||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 379 gccttcaccaccacgggcaccctcgtcgtctacctcatcatcatcggggatgtgctgtc 437
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 325 bits (164), Expect = 7e-86 Identities = 300/344 (87%), Gaps = 6/344 (1%) Strand = Plus / Minus Query: 115 gagccgctgctcccggagttctcgggcgggcacggcggcggggcgtcggtctccggcgcg 174 ||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||| Sbjct: 35320340 gagccgctgctgccggagttctctggcgg---cgggcatggggcgtcggtctccggcgcg 35320284 Query: 175 gtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcccggcggcaatg 234 ||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 35320283 gtgttcaacgtgtcgacgagcatcatcggcgccggaatcatgtcaatcccggcggcaatg 35320224 Query: 235 cgcgtcctcggggtcgtccccgcgctcgtcctcatcgcggccgccgccctcctctccgac 294 || || ||||| || ||||||||||| |||||||||| ||| |||| || |||||| Sbjct: 35320223 cgggtgctcggtgtgctccccgcgctcctcctcatcgccaccgtcgccgcgctgtccgac 35320164 Query: 295 gtctccgtggagttcatgctccggtacacgggctgggccagcggcccgccctcgtacgcg 354 | ||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||| Sbjct: 35320163 gcctccgtggaattcatgctgcggtacacgggctgggacagcggcccgccgtcgtacgcc 35320104 Query: 355 gggatcatgggcgacgcgttcggccgccgcgccggcgccgccgcgctgaacgtcttcata 414 |||||||||||||||||||||| |||||||||||||| ||||| || |||| ||| Sbjct: 35320103 gggatcatgggcgacgcgttcg---gccgcgccggcgccaaggcgctcaatgtctgcatc 35320047 Query: 415 gccttcaccaccgccggcaccctcgtcgtctacctcatcatcat 458 |||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 35320046 gccttcaccaccacgggcaccctcgtcgtctacctcatcatcat 35320003 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 168 cggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcccggc 227 |||||||||||||||| |||| |||||| || | |||||||| ||||||||||||||||| Sbjct: 35316291 cggcgcggtgttcaacgtgtcgacgagcgtcgtgggcgccgggatcatgtcgatcccggc 35316232 Query: 228 ggcaatgcgcgtcctcgg 245 ||| ||||| || ||||| Sbjct: 35316231 ggccatgcgggtgctcgg 35316214 Score = 48.1 bits (24), Expect = 0.026 Identities = 80/98 (81%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 361 atgggcgacgcgttcggccgccgcgccggcgccgccgcgctgaacgtcttcatagccttc 420 |||||||||||||||| |||||||||| ||||| ||| ||||||||| | |||||| Sbjct: 35316107 atgggcgacgcgttcg---gccgcgccggggccgcgctgctcaacgtcttcgtcgccttc 35316051 Query: 421 accaccgccggcaccctcgtcgtctacctcatcatcat 458 | | || ||| |||||| ||| |||||||||||||| Sbjct: 35316050 aacgccatcgggaccctcaccgtgtacctcatcatcat 35316013 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ccgtggagttcatgctccggtacac 323 ||||||| ||||||||||||||||| Sbjct: 35316160 ccgtggacttcatgctccggtacac 35316136 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 tcggccgccgcgccggcgccg 394 ||||||||||||||||||||| Sbjct: 10003819 tcggccgccgcgccggcgccg 10003799 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gcgccggcgccgccgcgctg 402 |||||||||||||||||||| Sbjct: 32455472 gcgccggcgccgccgcgctg 32455453
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 325 bits (164), Expect = 7e-86 Identities = 300/344 (87%), Gaps = 6/344 (1%) Strand = Plus / Minus Query: 115 gagccgctgctcccggagttctcgggcgggcacggcggcggggcgtcggtctccggcgcg 174 ||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||| Sbjct: 84201 gagccgctgctgccggagttctctggcgg---cgggcatggggcgtcggtctccggcgcg 84145 Query: 175 gtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcccggcggcaatg 234 ||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 84144 gtgttcaacgtgtcgacgagcatcatcggcgccggaatcatgtcaatcccggcggcaatg 84085 Query: 235 cgcgtcctcggggtcgtccccgcgctcgtcctcatcgcggccgccgccctcctctccgac 294 || || ||||| || ||||||||||| |||||||||| ||| |||| || |||||| Sbjct: 84084 cgggtgctcggtgtgctccccgcgctcctcctcatcgccaccgtcgccgcgctgtccgac 84025 Query: 295 gtctccgtggagttcatgctccggtacacgggctgggccagcggcccgccctcgtacgcg 354 | ||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||| Sbjct: 84024 gcctccgtggaattcatgctgcggtacacgggctgggacagcggcccgccgtcgtacgcc 83965 Query: 355 gggatcatgggcgacgcgttcggccgccgcgccggcgccgccgcgctgaacgtcttcata 414 |||||||||||||||||||||| |||||||||||||| ||||| || |||| ||| Sbjct: 83964 gggatcatgggcgacgcgttcg---gccgcgccggcgccaaggcgctcaatgtctgcatc 83908 Query: 415 gccttcaccaccgccggcaccctcgtcgtctacctcatcatcat 458 |||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 83907 gccttcaccaccacgggcaccctcgtcgtctacctcatcatcat 83864 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 168 cggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcccggc 227 |||||||||||||||| |||| |||||| || | |||||||| ||||||||||||||||| Sbjct: 80152 cggcgcggtgttcaacgtgtcgacgagcgtcgtgggcgccgggatcatgtcgatcccggc 80093 Query: 228 ggcaatgcgcgtcctcgg 245 ||| ||||| || ||||| Sbjct: 80092 ggccatgcgggtgctcgg 80075 Score = 48.1 bits (24), Expect = 0.026 Identities = 80/98 (81%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 361 atgggcgacgcgttcggccgccgcgccggcgccgccgcgctgaacgtcttcatagccttc 420 |||||||||||||||| |||||||||| ||||| ||| ||||||||| | |||||| Sbjct: 79968 atgggcgacgcgttcg---gccgcgccggggccgcgctgctcaacgtcttcgtcgccttc 79912 Query: 421 accaccgccggcaccctcgtcgtctacctcatcatcat 458 | | || ||| |||||| ||| |||||||||||||| Sbjct: 79911 aacgccatcgggaccctcaccgtgtacctcatcatcat 79874 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ccgtggagttcatgctccggtacac 323 ||||||| ||||||||||||||||| Sbjct: 80021 ccgtggacttcatgctccggtacac 79997
>ref|XM_467580.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1935 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 164 tctccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcc 223 |||||||||||||||||||||||||||| | |||| ||||||||||||||||| || ||| Sbjct: 318 tctccggcgcggtgttcaacctgtccaccaccatcgtcggcgccggcatcatggcgctcc 377 Query: 224 cggc 227 |||| Sbjct: 378 cggc 381
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 164 tctccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcc 223 |||||||||||||||||||||||||||| | |||||||||||| ||||||||| || ||| Sbjct: 15834196 tctccggcgcggtgttcaacctgtccaccaccatcatcggcgcgggcatcatggcgctcc 15834255 Query: 224 cggc 227 |||| Sbjct: 15834256 cggc 15834259 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 gccgccgcgccggcgccgccgc 398 |||||||||||||||||||||| Sbjct: 20193738 gccgccgcgccggcgccgccgc 20193717
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 164 tctccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcc 223 |||||||||||||||||||||||||||| | |||||||||||| ||||||||| || ||| Sbjct: 24369115 tctccggcgcggtgttcaacctgtccaccaccatcatcggcgcgggcatcatggcgctcc 24369174 Query: 224 cggc 227 |||| Sbjct: 24369175 cggc 24369178 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 gccgccgcgccggcgccgccgcgc 400 |||||||||| ||||||||||||| Sbjct: 16505633 gccgccgcgcaggcgccgccgcgc 16505610
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 164 tctccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcc 223 |||||||||||||||||||||||||||| | |||| ||||||||||||||||| || ||| Sbjct: 30281626 tctccggcgcggtgttcaacctgtccaccaccatcgtcggcgccggcatcatggcgctcc 30281567 Query: 224 cggc 227 |||| Sbjct: 30281566 cggc 30281563 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 cgccgcgccggcgccgccgc 398 |||||||||||||||||||| Sbjct: 32692356 cgccgcgccggcgccgccgc 32692337
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0039E17 Length = 144126 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 164 tctccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcc 223 |||||||||||||||||||||||||||| | |||||||||||| ||||||||| || ||| Sbjct: 119382 tctccggcgcggtgttcaacctgtccaccaccatcatcggcgcgggcatcatggcgctcc 119441 Query: 224 cggc 227 |||| Sbjct: 119442 cggc 119445
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 164 tctccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcc 223 |||||||||||||||||||||||||||| | |||||||||||| ||||||||| || ||| Sbjct: 102308 tctccggcgcggtgttcaacctgtccaccaccatcatcggcgcgggcatcatggcgctcc 102367 Query: 224 cggc 227 |||| Sbjct: 102368 cggc 102371
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 164 tctccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcc 223 |||||||||||||||||||||||||||| | |||| ||||||||||||||||| || ||| Sbjct: 82543 tctccggcgcggtgttcaacctgtccaccaccatcgtcggcgccggcatcatggcgctcc 82484 Query: 224 cggc 227 |||| Sbjct: 82483 cggc 82480
>dbj|AK109890.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-E04, full insert sequence Length = 1514 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 164 tctccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcc 223 |||||||||||||||||||||||||||| | |||||||||||| ||||||||| || ||| Sbjct: 1263 tctccggcgcggtgttcaacctgtccaccaccatcatcggcgcgggcatcatggcgctcc 1204 Query: 224 cggc 227 |||| Sbjct: 1203 cggc 1200
>dbj|AK069154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006P21, full insert sequence Length = 1935 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 164 tctccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcc 223 |||||||||||||||||||||||||||| | |||| ||||||||||||||||| || ||| Sbjct: 318 tctccggcgcggtgttcaacctgtccaccaccatcgtcggcgccggcatcatggcgctcc 377 Query: 224 cggc 227 |||| Sbjct: 378 cggc 381
>ref|NM_190405.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 168 cggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatcccggc 227 |||||||||||||||| |||| |||||| || | |||||||| ||||||||||||||||| Sbjct: 129 cggcgcggtgttcaacgtgtcgacgagcgtcgtgggcgccgggatcatgtcgatcccggc 188 Query: 228 ggcaatgcgcgtcctcgg 245 ||| ||||| || ||||| Sbjct: 189 ggccatgcgggtgctcgg 206 Score = 54.0 bits (27), Expect = 4e-04 Identities = 92/113 (81%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 361 atgggcgacgcgttcggccgccgcgccggcgccgccgcgctgaacgtcttcatagccttc 420 ||||||||||||||||||||| ||||| ||||| ||| ||||||||| | |||||| Sbjct: 313 atgggcgacgcgttcggccgc---gccggggccgcgctgctcaacgtcttcgtcgccttc 369 Query: 421 accaccgccggcaccctcgtcgtctacctcatcatcataggggacgtgctgtc 473 | | || ||| |||||| ||| |||||||||||||| || |||||| |||| Sbjct: 370 aacgccatcgggaccctcaccgtgtacctcatcatcatcggcgacgtgatgtc 422 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 ccgtggagttcatgctccggtacac 323 ||||||| ||||||||||||||||| Sbjct: 260 ccgtggacttcatgctccggtacac 284
>ref|NM_185810.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1347 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 167 ccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatg 216 |||||||||||||||||||||| |||| |||| |||| ||||| |||||| Sbjct: 95 ccggcgcggtgttcaacctgtcgacgaccatcgtcggggccggaatcatg 144
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 167 ccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatg 216 |||||||||||||||||||||| |||| |||| |||| ||||| |||||| Sbjct: 9407376 ccggcgcggtgttcaacctgtcgacgaccatcgtcggggccggaatcatg 9407425 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Minus Query: 171 cgcggtgttcaacctgtccacgagcatcatcggcgccggcat 212 ||||||||||||||| |||| |||||||||||||||||| Sbjct: 25930660 cgcggtgttcaacctcgccacctccatcatcggcgccggcat 25930619 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 27096531 ccgccgcgccggcgccgccg 27096550 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 cggccgccgcgccggcgccg 394 |||||||||||||||||||| Sbjct: 26574192 cggccgccgcgccggcgccg 26574173
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 167 ccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatg 216 |||||||||||||||||||||| |||| |||| |||| ||||| |||||| Sbjct: 135786 ccggcgcggtgttcaacctgtcgacgaccatcgtcggggccggaatcatg 135835
>dbj|AK120497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121D24, full insert sequence Length = 1985 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 167 ccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatg 216 |||||||||||||||||||||| |||| |||| |||| ||||| |||||| Sbjct: 424 ccggcgcggtgttcaacctgtcgacgaccatcgtcggggccggaatcatg 473
>dbj|AK099920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116L21, full insert sequence Length = 1869 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 167 ccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatg 216 |||||||||||||||||||||| |||| |||| |||| ||||| |||||| Sbjct: 356 ccggcgcggtgttcaacctgtcgacgaccatcgtcggggccggaatcatg 405
>dbj|AK066102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051P03, full insert sequence Length = 1778 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 167 ccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatg 216 |||||||||||||||||||||| |||| |||| |||| ||||| |||||| Sbjct: 292 ccggcgcggtgttcaacctgtcgacgaccatcgtcggggccggaatcatg 341
>dbj|AK064301.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B03, full insert sequence Length = 1467 Score = 54.0 bits (27), Expect = 4e-04 Identities = 92/113 (81%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 361 atgggcgacgcgttcggccgccgcgccggcgccgccgcgctgaacgtcttcatagccttc 420 ||||||||||||||||||||| ||||| ||||| ||| ||||||||| | |||||| Sbjct: 45 atgggcgacgcgttcggccgc---gccggggccgcgctgctcaacgtcttcgtcgccttc 101 Query: 421 accaccgccggcaccctcgtcgtctacctcatcatcataggggacgtgctgtc 473 | | || ||| |||||| ||| |||||||||||||| || |||||| |||| Sbjct: 102 aacgccatcgggaccctcaccgtgtacctcatcatcatcggcgacgtgatgtc 154
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 237 cgtcctcggggtcgtccccgcgctcgtcct 266 |||||||||||||||||||||||| ||||| Sbjct: 96813 cgtcctcggggtcgtccccgcgctggtcct 96784
>ref|XM_479720.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1644 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccgcgct 401 |||||||||||||||||||||||| Sbjct: 219 ccgccgcgccggcgccgccgcgct 242
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08, complete sequence Length = 94286 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 97 ggcgccgccggcgtcgacgagccg 120 |||||||||||||||||||||||| Sbjct: 52875 ggcgccgccggcgtcgacgagccg 52852
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 97 ggcgccgccggcgtcgacgagccg 120 |||||||||||||||||||||||| Sbjct: 119776 ggcgccgccggcgtcgacgagccg 119753
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 99 cgccgccggcgtcgacgagccgct 122 |||||||||||||||||||||||| Sbjct: 581087 cgccgccggcgtcgacgagccgct 581064
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccgcgct 401 |||||||||||||||||||||||| Sbjct: 452403 ccgccgcgccggcgccgccgcgct 452426 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 tcgtcgtctacctcatcatc 456 |||||||||||||||||||| Sbjct: 5031718 tcgtcgtctacctcatcatc 5031737
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 97 ggcgccgccggcgtcgacgagccg 120 |||||||||||||||||||||||| Sbjct: 6748614 ggcgccgccggcgtcgacgagccg 6748591 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 20994017 ccgccgcgccggcgccgccg 20993998 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 cggccgccgcgccggcgccgccgc 398 |||||||||||||| ||||||||| Sbjct: 4594907 cggccgccgcgccgccgccgccgc 4594884
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccgcgct 401 |||||||||||||||||||||||| Sbjct: 42363 ccgccgcgccggcgccgccgcgct 42386
>dbj|AK101912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071G08, full insert sequence Length = 1644 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccgcgct 401 |||||||||||||||||||||||| Sbjct: 219 ccgccgcgccggcgccgccgcgct 242
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 39 ccacacgccccagagcacgccgaacac 65 |||||||||||| |||||||||||||| Sbjct: 120308 ccacacgccccacagcacgccgaacac 120334
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 39 ccacacgccccagagcacgccgaacac 65 |||||||||||| |||||||||||||| Sbjct: 124503 ccacacgccccacagcacgccgaacac 124529
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 39 ccacacgccccagagcacgccgaacac 65 |||||||||||| |||||||||||||| Sbjct: 33066 ccacacgccccatagcacgccgaacac 33092
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 237 cgtcctcggggtcgtccccgcgctcgt 263 |||||||||||| |||||||||||||| Sbjct: 8672960 cgtcctcggggtggtccccgcgctcgt 8672986 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 ccgccgcgccggcgccgccgcgctg 402 |||||||||| |||||||||||||| Sbjct: 2105745 ccgccgcgcccgcgccgccgcgctg 2105721 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcatcatcggcgccggcatc 213 |||||||||||||||||||| Sbjct: 8699253 gcatcatcggcgccggcatc 8699234 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 tccccgcgctcgtcctcatcgcgg 274 ||||||||||||||||| |||||| Sbjct: 8662010 tccccgcgctcgtcctcttcgcgg 8662033 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 ccggcgcggtgttcaacctgtcca 190 |||||||||||| ||||||||||| Sbjct: 4187980 ccggcgcggtgtacaacctgtcca 4187957
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 384 cgccggcgccgccgcgctgaac 405 |||||||||||||||||||||| Sbjct: 1215481 cgccggcgccgccgcgctgaac 1215460 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 366 cgacgcgttcggccgccgcgccggcgcc 393 ||||||| ||||||||||||||||||| Sbjct: 3619781 cgacgcgcgcggccgccgcgccggcgcc 3619808
>ref|XM_473856.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1992 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 cggcgtcgacgagccgctgctc 126 |||||||||||||||||||||| Sbjct: 375 cggcgtcgacgagccgctgctc 396
>ref|XM_855759.1| PREDICTED: Canis familiaris similar to Homeobox protein DLX-1, transcript variant 5 (LOC607766), mRNA Length = 1348 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 373 ttcggccgccgcgccggcgccgccgc 398 |||||||||||||||| ||||||||| Sbjct: 134 ttcggccgccgcgccgccgccgccgc 109
>ref|XM_855727.1| PREDICTED: Canis familiaris similar to Homeobox protein DLX-1, transcript variant 4 (LOC607766), mRNA Length = 961 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 373 ttcggccgccgcgccggcgccgccgc 398 |||||||||||||||| ||||||||| Sbjct: 125 ttcggccgccgcgccgccgccgccgc 100
>ref|XM_848007.1| PREDICTED: Canis familiaris similar to Rho GTPase activating protein 15 (LOC490917), mRNA Length = 2272 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 234 gcgcgtcctcggggtcgtccccgcgctcgtcctc 267 ||||||||||||| |||||| || |||||||||| Sbjct: 506 gcgcgtcctcgggctcgtcctcgggctcgtcctc 473
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 252 ccccgcgctcgtcctcatcgcggccgccgc 281 ||||||||||||||||| |||||| ||||| Sbjct: 30471 ccccgcgctcgtcctcaccgcggcggccgc 30500
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 cggcgtcgacgagccgctgctc 126 |||||||||||||||||||||| Sbjct: 20265 cggcgtcgacgagccgctgctc 20286
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 cggcgtcgacgagccgctgctc 126 |||||||||||||||||||||| Sbjct: 135558 cggcgtcgacgagccgctgctc 135579
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 90 gggagcaggcgccgccggcgtcgacg 115 ||||||||||||||||| |||||||| Sbjct: 2161222 gggagcaggcgccgccgccgtcgacg 2161197
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 cggcgtcgacgagccgctgctc 126 |||||||||||||||||||||| Sbjct: 31038185 cggcgtcgacgagccgctgctc 31038206 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 ccctcctctccgacgtctccg 301 ||||||||||||||||||||| Sbjct: 24287997 ccctcctctccgacgtctccg 24288017
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 385 gccggcgccgccgcgctgaacg 406 |||||||||||||||||||||| Sbjct: 3370421 gccggcgccgccgcgctgaacg 3370442 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 ccgcgccggcgccgccgcgct 401 ||||||||||||||||||||| Sbjct: 1548596 ccgcgccggcgccgccgcgct 1548576 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ccgcgccggcgccgccgcgc 400 |||||||||||||||||||| Sbjct: 4417363 ccgcgccggcgccgccgcgc 4417382 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 4095854 ccgccgcgccggcgccgccg 4095873 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 cgccgcgccggcgccgccgc 398 |||||||||||||||||||| Sbjct: 3306351 cgccgcgccggcgccgccgc 3306332 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 cgccgcgccggcgccgccgcgctg 402 ||||||||| |||||||||||||| Sbjct: 1756131 cgccgcgcccgcgccgccgcgctg 1756154 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 gccgccgcgccggcgccgcc 396 |||||||||||||||||||| Sbjct: 1018057 gccgccgcgccggcgccgcc 1018076 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 ggccgccgcgccggcgccgc 395 |||||||||||||||||||| Sbjct: 632096 ggccgccgcgccggcgccgc 632115 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ccgcgccggcgccgccgcgc 400 |||||||||||||||||||| Sbjct: 145772 ccgcgccggcgccgccgcgc 145791
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 194 gcatcatcggcgccggcatcat 215 |||||||||||||||||||||| Sbjct: 8279508 gcatcatcggcgccggcatcat 8279487
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 gccgccgcgccggcgccgccgc 398 |||||||||||||||||||||| Sbjct: 87238 gccgccgcgccggcgccgccgc 87217
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Minus Query: 171 cgcggtgttcaacctgtccacgagcatcatcggcgccggcat 212 ||||||||||||||| |||| |||||||||||||||||| Sbjct: 85758 cgcggtgttcaacctcgccacctccatcatcggcgccggcat 85717
>gb|AF104994.1|AF104994 Streptomyces coelicolor A3(2) periplasmic binding protein (atrA), permease (AtrB), ATP-binding protein (atrC), methyltransferase (metZ), signal peptidase, Ni-containing superoxide dismutase (sodN), puromycin N-acetyltransferase (pat), and geranyl transferase (gtr) genes, complete cds; and unknown genes Length = 8568 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 252 ccccgcgctcgtcctcatcgcggccgccgc 281 ||||||||||||||||| |||||| ||||| Sbjct: 8226 ccccgcgctcgtcctcaccgcggcggccgc 8197
>dbj|AK105833.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E09, full insert sequence Length = 2079 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 377 gccgccgcgccggcgccgccgc 398 |||||||||||||||||||||| Sbjct: 1488 gccgccgcgccggcgccgccgc 1509
>dbj|AK105614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B09, full insert sequence Length = 2305 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 cggcgtcgacgagccgctgctc 126 |||||||||||||||||||||| Sbjct: 472 cggcgtcgacgagccgctgctc 493
>dbj|AK070101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044I16, full insert sequence Length = 2261 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Plus Query: 171 cgcggtgttcaacctgtccacgagcatcatcggcgccggcat 212 ||||||||||||||| |||| |||||||||||||||||| Sbjct: 720 cgcggtgttcaacctcgccacctccatcatcggcgccggcat 761
>dbj|AK069344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010O14, full insert sequence Length = 2254 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 cggcgtcgacgagccgctgctc 126 |||||||||||||||||||||| Sbjct: 421 cggcgtcgacgagccgctgctc 442
>dbj|AK060485.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D08, full insert sequence Length = 1811 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 377 gccgccgcgccggcgccgccgc 398 |||||||||||||||||||||| Sbjct: 1220 gccgccgcgccggcgccgccgc 1241
>dbj|AP006865.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT37H21, TM1032, complete sequence Length = 95067 Score = 44.1 bits (22), Expect = 0.41 Identities = 55/66 (83%) Strand = Plus / Minus Query: 163 gtctccggcgcggtgttcaacctgtccacgagcatcatcggcgccggcatcatgtcgatc 222 ||||||||||| |||||||| | || || ||||| || |||||||| |||||||| || Sbjct: 72363 gtctccggcgccgtgttcaatgtctctaccagcataattggcgccggaatcatgtctctc 72304 Query: 223 ccggcg 228 |||||| Sbjct: 72303 ccggcg 72298 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tctccggcgcggtgttcaac 183 |||||||||||||||||||| Sbjct: 79986 tctccggcgcggtgttcaac 79967
>ref|NM_188144.1| Oryza sativa (japonica cultivar-group), Ozsa8576 predicted mRNA Length = 1248 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 tcggccgccgcgccggcgccg 394 ||||||||||||||||||||| Sbjct: 176 tcggccgccgcgccggcgccg 156
>ref|XM_472951.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2625 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 ccctcctctccgacgtctccg 301 ||||||||||||||||||||| Sbjct: 44 ccctcctctccgacgtctccg 64
>gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' region photosynthesis gene cluster, partial sequence Length = 24637 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 cgccgaacacgaggccgccggcgag 80 ||||||||||||||||| ||||||| Sbjct: 327 cgccgaacacgaggccggcggcgag 351
>ref|XM_978680.1| PREDICTED: Mus musculus gene model 691, (NCBI) (Gm691), mRNA Length = 1161 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccgc 398 ||||||||||||||||||||| Sbjct: 488 ccgccgcgccggcgccgccgc 508
>gb|AC123520.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034O04, complete sequence Length = 164882 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 263 tcctcatcgcggccgccgccctcct 287 |||||||||||||||||| |||||| Sbjct: 79505 tcctcatcgcggccgccgtcctcct 79529
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 381 ccgcgccggcgccgccgcgctgaac 405 |||||||| |||||||||||||||| Sbjct: 4777832 ccgcgccgtcgccgccgcgctgaac 4777808 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 gccgccgcgccggcgccgccg 397 ||||||||||||||||||||| Sbjct: 3458098 gccgccgcgccggcgccgccg 3458118
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 ccctcctctccgacgtctccg 301 ||||||||||||||||||||| Sbjct: 110409 ccctcctctccgacgtctccg 110429
>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete sequence Length = 141128 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 ccctcctctccgacgtctccg 301 ||||||||||||||||||||| Sbjct: 4408 ccctcctctccgacgtctccg 4428
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccgc 398 ||||||||||||||||||||| Sbjct: 3582740 ccgccgcgccggcgccgccgc 3582760 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gccgccgcgccggcgccgcc 396 |||||||||||||||||||| Sbjct: 24071453 gccgccgcgccggcgccgcc 24071434
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 263 tcctcatcgcggccgccgccctcct 287 |||||||||||||||||| |||||| Sbjct: 5869621 tcctcatcgcggccgccgtcctcct 5869645 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 369 cgcgttcggccgccgcgccggcgccgccgcgc 400 ||||||| |||||||||||| ||| ||||||| Sbjct: 25593977 cgcgttccgccgccgcgccgccgctgccgcgc 25594008
>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F09 Length = 132713 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 tcggccgccgcgccggcgccg 394 ||||||||||||||||||||| Sbjct: 84101 tcggccgccgcgccggcgccg 84081
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 tcggccgccgcgccggcgccg 394 ||||||||||||||||||||| Sbjct: 139585 tcggccgccgcgccggcgccg 139565
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 gcggccgccgccctcctctcc 291 ||||||||||||||||||||| Sbjct: 352299 gcggccgccgccctcctctcc 352279
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 catcatcggcgccggcatcat 215 ||||||||||||||||||||| Sbjct: 5687583 catcatcggcgccggcatcat 5687603 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 tcggccgccgcgccggcgccgccgc 398 |||||||||||||| |||||||||| Sbjct: 3207341 tcggccgccgcgcccgcgccgccgc 3207317 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 ggcgccggcatcatgtcgat 221 |||||||||||||||||||| Sbjct: 2226270 ggcgccggcatcatgtcgat 2226251
>dbj|AK111039.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-A12, full insert sequence Length = 875 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 263 tcctcatcgcggccgccgccctcct 287 |||||||||||||||||| |||||| Sbjct: 78 tcctcatcgcggccgccgtcctcct 102
>dbj|AK067033.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089J22, full insert sequence Length = 1677 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccgc 398 ||||||||||||||||||||| Sbjct: 267 ccgccgcgccggcgccgccgc 287
>dbj|AK064952.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A01, full insert sequence Length = 2351 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 tcggccgccgcgccggcgccg 394 ||||||||||||||||||||| Sbjct: 894 tcggccgccgcgccggcgccg 874
>emb|AL627350.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0302E05, complete sequence Length = 61795 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 ccctcctctccgacgtctccg 301 ||||||||||||||||||||| Sbjct: 16305 ccctcctctccgacgtctccg 16325
>dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0021A04 Length = 50487 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 tcggccgccgcgccggcgccg 394 ||||||||||||||||||||| Sbjct: 31376 tcggccgccgcgccggcgccg 31356
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 gccgccgcgccggcgccgccg 397 ||||||||||||||||||||| Sbjct: 1656930 gccgccgcgccggcgccgccg 1656910 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 cgggcgggcacggcggcgggg 157 ||||||||||||||||||||| Sbjct: 1105614 cgggcgggcacggcggcgggg 1105634 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gcgccggcatcatgtcgatc 222 |||||||||||||||||||| Sbjct: 922137 gcgccggcatcatgtcgatc 922118
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 cggccgccgcgccggcgccgc 395 ||||||||||||||||||||| Sbjct: 3590327 cggccgccgcgccggcgccgc 3590307 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 cggccgccgcgccggcgccgc 395 ||||||||||||||||||||| Sbjct: 1551460 cggccgccgcgccggcgccgc 1551480
>emb|AJ628955.2| Streptomyces rimosus subsp. paromomycinus genomic region of the paromomycin biosynthesis gene cluster, strain NRRL 2455 Length = 48169 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ggcacggcggcggggcgtcgg 163 ||||||||||||||||||||| Sbjct: 1244 ggcacggcggcggggcgtcgg 1264
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 263 tcctcatcgcggccgccgccctcct 287 |||||||||||||||||| |||||| Sbjct: 5936098 tcctcatcgcggccgccgtcctcct 5936122 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 369 cgcgttcggccgccgcgccggcgccgccgcgc 400 ||||||| |||||||||||| ||| ||||||| Sbjct: 25912647 cgcgttccgccgccgcgccgccgctgccgcgc 25912678
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccgc 398 ||||||||||||||||||||| Sbjct: 3582685 ccgccgcgccggcgccgccgc 3582705 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gccgccgcgccggcgccgcc 396 |||||||||||||||||||| Sbjct: 23999659 gccgccgcgccggcgccgcc 23999640
>emb|AL731761.3|CNS07YPV Oryza sativa chromosome 12, . BAC OJ1119_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122128 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 ccgccgcgccggcgccgccgc 398 ||||||||||||||||||||| Sbjct: 106688 ccgccgcgccggcgccgccgc 106668
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccgc 398 ||||||||||||||||||||| Sbjct: 97668 ccgccgcgccggcgccgccgc 97688
>emb|AM162283.1| Oryza sativa mRNA for 4-alpha-L-fucosyltransferase (a4Lea gene) Length = 1293 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccgc 398 ||||||||||||||||||||| Sbjct: 112 ccgccgcgccggcgccgccgc 132
>emb|AL663092.15| Mouse DNA sequence from clone RP23-91I20 on chromosome 2, complete sequence Length = 207554 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccgc 398 ||||||||||||||||||||| Sbjct: 157873 ccgccgcgccggcgccgccgc 157893
>dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene cluster, complete cds, stain:IL144 Length = 58996 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 cgccgaacacgaggccgccggcgag 80 ||||||||||||||||| ||||||| Sbjct: 9680 cgccgaacacgaggccggcggcgag 9704
>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0036E02 Length = 145931 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 tcggccgccgcgccggcgccg 394 ||||||||||||||||||||| Sbjct: 98312 tcggccgccgcgccggcgccg 98292
>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048I21, complete sequence Length = 137650 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 120795 ccgccgcgccggcgccgccg 120776
>ref|XM_475273.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1068 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 123 ccgccgcgccggcgccgccg 142
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 cgccgcgccggcgccgccgc 398 |||||||||||||||||||| Sbjct: 225578 cgccgcgccggcgccgccgc 225559
>ref|NM_191406.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2691 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gcgccggcgccgccgcgctg 402 |||||||||||||||||||| Sbjct: 109 gcgccggcgccgccgcgctg 90
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cgccggcgtcgacgagccgctgct 125 ||||||||||| |||||||||||| Sbjct: 89874 cgccggcgtcggcgagccgctgct 89851
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 cgcgctcgtcctcatcgcggccgccgcc 282 |||||||| |||| |||||||||||||| Sbjct: 2468184 cgcgctcgccctcttcgcggccgccgcc 2468157
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 4361962 ccgccgcgccggcgccgccg 4361943 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgcgccggcgccgccgcgctgaac 405 |||||| ||||||||||||||||| Sbjct: 1613796 cgcgcccgcgccgccgcgctgaac 1613819
>ref|XM_360200.1| Magnaporthe grisea 70-15 hypothetical protein (MG05574.4) partial mRNA Length = 1572 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 catcatcggcgccggcatca 214 |||||||||||||||||||| Sbjct: 162 catcatcggcgccggcatca 181
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ccgcgccggcgccgccgcgc 400 |||||||||||||||||||| Sbjct: 2390786 ccgcgccggcgccgccgcgc 2390805
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 tcggccgccgcgccggcgccgccg 397 ||||||||||||||| |||||||| Sbjct: 50397 tcggccgccgcgccgtcgccgccg 50420
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 cggccgccgcgccggcgccgccgc 398 |||||||||||||| ||||||||| Sbjct: 105374 cggccgccgcgccgccgccgccgc 105351
>ref|XM_956938.1| Neurospora crassa OR74A hypothetical protein (NCU08682.1) partial mRNA Length = 4053 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcgtcgtctacctcatcatc 456 |||||||||||||||||||| Sbjct: 1469 tcgtcgtctacctcatcatc 1450
>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04, complete sequence Length = 103458 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 9395 ccgccgcgccggcgccgccg 9376
>ref|XM_329805.1| Neurospora crassa OR74A hypothetical protein (NCU08682.1) partial mRNA Length = 4053 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcgtcgtctacctcatcatc 456 |||||||||||||||||||| Sbjct: 1469 tcgtcgtctacctcatcatc 1450
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cgccgccggcgtcgacgagccgct 122 ||||||||||| |||||||||||| Sbjct: 1096941 cgccgccggcgacgacgagccgct 1096918 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 gccgccgcgccggcgccgccgcgc 400 |||||||||||||||||| ||||| Sbjct: 760706 gccgccgcgccggcgccggcgcgc 760729
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 cgcgctcgtcctcatcgcggccgccgcc 282 |||||||| |||| |||||||||||||| Sbjct: 3717921 cgcgctcgccctcttcgcggccgccgcc 3717948 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 gcgccgccggcgtcgacgagccgc 121 |||||| ||||||||||||||||| Sbjct: 997020 gcgccgtcggcgtcgacgagccgc 997043
>gb|AE009035.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 61 of 256 of the complete sequence Length = 11766 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 atcatcggcgccggcatcat 215 |||||||||||||||||||| Sbjct: 1884 atcatcggcgccggcatcat 1903
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 tcggccgccgcgccggcgccgccg 397 ||||||||||||||| |||||||| Sbjct: 29720980 tcggccgccgcgccgtcgccgccg 29720957 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cgccggcgtcgacgagccgctgct 125 ||||||||||| |||||||||||| Sbjct: 24714327 cgccggcgtcggcgagccgctgct 24714304
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcatcatcggcgccggcatc 213 |||||||||||||||||||| Sbjct: 2400890 gcatcatcggcgccggcatc 2400871
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gcgccggcgccgccgcgctg 402 |||||||||||||||||||| Sbjct: 3303412 gcgccggcgccgccgcgctg 3303393
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 369 cgcgttcggccgccgcgccggcgccgccgcgc 400 ||||||| |||||||||||| ||| ||||||| Sbjct: 84024 cgcgttccgccgccgcgccgccgctgccgcgc 84055
>ref|XM_795467.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC589602 (LOC589602), mRNA Length = 1638 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 cctcatcatcataggggacg 466 |||||||||||||||||||| Sbjct: 1047 cctcatcatcataggggacg 1028
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gcgccggcgccgccgcgctg 402 |||||||||||||||||||| Sbjct: 3120875 gcgccggcgccgccgcgctg 3120856
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ccggcgtcgacgagccgctg 123 |||||||||||||||||||| Sbjct: 2929068 ccggcgtcgacgagccgctg 2929087
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 202927 ccgccgcgccggcgccgccg 202908
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgcgccggcgccgccgcgctgaac 405 |||||| ||||||||||||||||| Sbjct: 230870 cgcgcccgcgccgccgcgctgaac 230893
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gccgcgccggcgccgccgcg 399 |||||||||||||||||||| Sbjct: 193885 gccgcgccggcgccgccgcg 193904
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gccgcgccggcgccgccgcg 399 |||||||||||||||||||| Sbjct: 113028 gccgcgccggcgccgccgcg 113047
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gccgcgccggcgccgccgcg 399 |||||||||||||||||||| Sbjct: 191999 gccgcgccggcgccgccgcg 192018
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cgccgccggcgtcgacgagccgct 122 ||||||||||| |||||||||||| Sbjct: 2414431 cgccgccggcgacgacgagccgct 2414408 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 gccgccgcgccggcgccgccgcgc 400 |||||||||||||||||| ||||| Sbjct: 2081019 gccgccgcgccggcgccggcgcgc 2081042
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 cgcgctcgtcctcatcgcggccgccgcc 282 |||||||| |||| |||||||||||||| Sbjct: 3458227 cgcgctcgccctcttcgcggccgccgcc 3458254 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 gcgccgccggcgtcgacgagccgc 121 |||||| ||||||||||||||||| Sbjct: 839553 gcgccgtcggcgtcgacgagccgc 839576
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 239024 ccgccgcgccggcgccgccg 239005
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgcgccggcgccgccgcgctgaac 405 |||||| ||||||||||||||||| Sbjct: 295641 cgcgcccgcgccgccgcgctgaac 295664
>emb|AJ416557.1|CRE416557 Chlamydomonas reinhardtii mRNA for putative blue light receptor (putative blue light receptor gene) Length = 3959 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 1835 ccgccgcgccggcgccgccg 1816
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 atcatcggcgccggcatcat 215 |||||||||||||||||||| Sbjct: 2535773 atcatcggcgccggcatcat 2535792
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cggcatcatgtcgatcccgg 226 |||||||||||||||||||| Sbjct: 4664143 cggcatcatgtcgatcccgg 4664124 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 cggccgccgcgccggcgccg 394 |||||||||||||||||||| Sbjct: 2506324 cggccgccgcgccggcgccg 2506305
>gb|AE005721.1| Caulobacter crescentus CB15 section 47 of 359 of the complete genome Length = 12858 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ggcgacgcgttcggccgccgcgcc 387 ||||||||| |||||||||||||| Sbjct: 8280 ggcgacgcgatcggccgccgcgcc 8303
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggtacacgggctgggccagc 336 |||||||||||||||||||| Sbjct: 55775 ggtacacgggctgggccagc 55756
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cgccggcgtcgacgagccgctgct 125 ||||||||||| |||||||||||| Sbjct: 9846 cgccggcgtcggcgagccgctgct 9823
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gcgccggcgccgccgcgctg 402 |||||||||||||||||||| Sbjct: 781077 gcgccggcgccgccgcgctg 781058
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 atcatcggcgccggcatcat 215 |||||||||||||||||||| Sbjct: 660762 atcatcggcgccggcatcat 660781
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cgccgccggcgtcgacgagccgct 122 ||||||||||| |||||||||||| Sbjct: 321619 cgccgccggcgacgacgagccgct 321642
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 tcggccgccgcgccggcgccgccg 397 ||||||||||||||| |||||||| Sbjct: 29812402 tcggccgccgcgccgtcgccgccg 29812379 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cgccggcgtcgacgagccgctgct 125 ||||||||||| |||||||||||| Sbjct: 24631157 cgccggcgtcggcgagccgctgct 24631134
>gb|AC009238.4| Homo sapiens BAC clone RP11-468G5 from 2, complete sequence Length = 202361 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 gccgccgcgccggcgccgccgcgc 400 |||||||||||| ||||||||||| Sbjct: 93664 gccgccgcgccgccgccgccgcgc 93641
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gcgccggcgccgccgcgctg 402 |||||||||||||||||||| Sbjct: 42993 gcgccggcgccgccgcgctg 42974
>dbj|AP005448.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0404G11 Length = 167623 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 gccgccgcgccggcgccgccgcgc 400 |||||||||| ||||||||||||| Sbjct: 146424 gccgccgcgcaggcgccgccgcgc 146401
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 tcgtcgtctacctcatcatc 456 |||||||||||||||||||| Sbjct: 69275 tcgtcgtctacctcatcatc 69294
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 tcggccgccgcgccggcgcc 393 |||||||||||||||||||| Sbjct: 4602029 tcggccgccgcgccggcgcc 4602048
>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1143G03 Length = 137770 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gcgccggcgccgccgcgctg 402 |||||||||||||||||||| Sbjct: 134969 gcgccggcgccgccgcgctg 134950
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 65341 ccgccgcgccggcgccgccg 65360
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 cggccgccgcgccggcgccg 394 |||||||||||||||||||| Sbjct: 107845 cggccgccgcgccggcgccg 107826
>dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1448_G06 Length = 136823 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 cgccgcgccggcgccgccgc 398 |||||||||||||||||||| Sbjct: 20591 cgccgcgccggcgccgccgc 20572
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 cgccgcgccggcgccgccgc 398 |||||||||||||||||||| Sbjct: 119727 cgccgcgccggcgccgccgc 119708
>dbj|AK121485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150B15, full insert sequence Length = 1915 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 354 ccgccgcgccggcgccgccg 373
>emb|AJ416556.1|CRE416556 Chlamydomonas reinhardtii phot gene for putative blue light receptor, exons 1-13 Length = 10656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccgccgcgccggcgccgccg 397 |||||||||||||||||||| Sbjct: 7236 ccgccgcgccggcgccgccg 7217
>dbj|AK110550.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-C01, full insert sequence Length = 1202 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cgccggcgtcgacgagccgctgct 125 ||||||||||| |||||||||||| Sbjct: 332 cgccggcgtcggcgagccgctgct 355
>dbj|AK109762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G11, full insert sequence Length = 1040 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 cggccgccgcgccggcgccg 394 |||||||||||||||||||| Sbjct: 718 cggccgccgcgccggcgccg 737
>gb|AC004081.1|AC004081 Homo sapiens PAC clone RP1-320J15 from Xq23, complete sequence Length = 149409 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agcatgggcaagggagcagg 98 |||||||||||||||||||| Sbjct: 73421 agcatgggcaagggagcagg 73440
>dbj|AK101775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064M23, full insert sequence Length = 3155 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gcgccggcgccgccgcgctg 402 |||||||||||||||||||| Sbjct: 339 gcgccggcgccgccgcgctg 320
>dbj|AK099986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130A09, full insert sequence Length = 1964 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gccgccgcgccggcgccgcc 396 |||||||||||||||||||| Sbjct: 198 gccgccgcgccggcgccgcc 179
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ggcgccgccggcgtcgacga 116 |||||||||||||||||||| Sbjct: 22037 ggcgccgccggcgtcgacga 22018
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 376 ggccgccgcgccggcgccgccgcg 399 ||||| |||||||||||||||||| Sbjct: 4333696 ggccgtcgcgccggcgccgccgcg 4333673
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 gccgccgcgccggcgccgcc 396 |||||||||||||||||||| Sbjct: 15943 gccgccgcgccggcgccgcc 15962
>dbj|AB248874.1| Streptomyces albulus sttH genes for hypothetical protein, streptothricin hydrolase, putative lipase, complete and partial cds Length = 2913 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 423 caccgccggcaccctcgtcgtctacctc 450 |||||||||| ||||||||||| ||||| Sbjct: 1810 caccgccggcgccctcgtcgtccacctc 1837
>gb|M94727.1|MXACARC Myxococcus xanthus phytoene dehydrogenase (carC) gene, complete cds Length = 1955 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggcgcggtgttcaacctgtc 188 |||||||||||||||||||| Sbjct: 1654 ggcgcggtgttcaacctgtc 1673 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,126,158 Number of Sequences: 3902068 Number of extensions: 3126158 Number of successful extensions: 99644 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84532 Number of HSP's gapped (non-prelim): 15100 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
