>BAR1_CHIPA (P08724) Balbiani ring protein 1 (Giant secretory protein I-A)|
           (GSP-IA) (Fragment)
          Length = 326

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 228 CTRSAGRFS-SLCRCVSASKSAMSQEDVLKIQTCV 329
           C +  GRFS S CRC SA K + S+    +  TCV
Sbjct: 51  CAKRKGRFSASKCRCTSAGKPSKSEPRTERPTTCV 85

>SH2P1_MOUSE (Q62018) SH2 domain-binding protein 1 (Tetratricopeptide|
            repeat-containing, SH2-binding phosphoprotein of 150 kDa)
            (TPR-containing, SH2-binding phosphoprotein of 150 kDa)
            (p150TSP)
          Length = 1173

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -2

Query: 275  RNAAAQRREAPRRSGAEETDAEGGSNQGQESRKKAATRK 159
            +N +     +PRRSG +E+D +  S+Q    R+++ + +
Sbjct: 1061 QNKSGSEAGSPRRSGRQESDEDSDSDQPSRKRRRSGSEQ 1099

>VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6)|
           (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130)
           (Glycoprotein B)
          Length = 932

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -2

Query: 332 EHAGLYLEHILLAHG*LAGRNAAAQRREAPRRSGAEETDAEGG 204
           E A LYL+ +  ++G L G  AAA  +  PRR+      A GG
Sbjct: 470 ELAKLYLQELARSNGTLEGLFAAAAPKPGPRRARRAAPSAPGG 512

>TOP2_CAEEL (Q23670) Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA|
            topoisomerase II)
          Length = 1520

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -2

Query: 275  RNAAAQRREAPRRSGAEETDAEGGSNQGQESRKKAATRKHCSP 147
            +  A  ++ AP++  +E +D  GG +  +E+ KK +T K  SP
Sbjct: 1397 KKPAPAKKAAPKKKKSEFSDLSGGDSD-EEAEKKPSTSKKPSP 1438

>VG22_ICHV1 (Q00105) Hypothetical gene 22 protein|
          Length = 1403

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 260 QRREAPRRSGAEETDAEGGSNQGQESRKKAATRKHCS 150
           + R A R+    E  A+GG  Q +  R + A   HC+
Sbjct: 622 ENRMARRKMDPTEAAAKGGPRQSERPRSQTAVHAHCA 658

>ATRX_MOUSE (Q61687) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked nuclear protein)
            (Heterochromatin protein 2) (HP1 alpha-interacting
            protein) (HP1-BP38 protein)
          Length = 2476

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -2

Query: 275  RNAAAQRREAPRRSGAEETDAEGGSNQGQESRKKAATRK 159
            RN++++R     +S +  +DAEG S   ++ +K+  + K
Sbjct: 1117 RNSSSKRNTKEVKSASSSSDAEGSSEDNKKQKKQRTSAK 1155

>BAR1_CHITE (P02849) Balbiani ring protein 1 (Giant secretory protein I-A)|
           (GSP-IA) (Fragment)
          Length = 174

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 228 CTRSAGRFS-SLCRCVSASKSAMSQE 302
           C R  GRF+ S CRC SA K + + E
Sbjct: 17  CARRNGRFNASKCRCTSAGKPSRNSE 42



 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +3

Query: 228 CTRSAGRFS-SLCRCVSASKSAMSQE 302
           C R  GRF+ S CRC SA K +   E
Sbjct: 99  CARRNGRFNASKCRCTSAGKPSRKSE 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,798,479
Number of Sequences: 219361
Number of extensions: 644872
Number of successful extensions: 1899
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1899
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)