>SYQ_XYLFT (Q87DU6) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 580

 Score = 26.9 bits (58), Expect(2) = 0.058
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 139 LPKMAHLEHPIPWHGSPKQPSHPTYLKF 56
           LP  +HL  P+   G P++PS P  ++F
Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQPRQIEF 283



 Score = 26.6 bits (57), Expect(2) = 0.058
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 282 VTHSLADFDFHDHRP 238
           +THSL   +F DHRP
Sbjct: 231 ITHSLCTLEFEDHRP 245

>SYQ_XYLFA (Q9PDP1) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 580

 Score = 26.9 bits (58), Expect(2) = 0.058
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 139 LPKMAHLEHPIPWHGSPKQPSHPTYLKF 56
           LP  +HL  P+   G P++PS P  ++F
Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQPRQIEF 283



 Score = 26.6 bits (57), Expect(2) = 0.058
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 282 VTHSLADFDFHDHRP 238
           +THSL   +F DHRP
Sbjct: 231 ITHSLCTLEFEDHRP 245

>PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin|
           heavy chain A; Activation peptide; Plasmin heavy chain
           A, short form; Plasmin light chain B]
          Length = 812

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = +2

Query: 164 PEAGLRCPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTTHLPNQLAPKMDGAE 328
           P AGL     R P   K  W   T  R  W+  + K+C  T      AP+  G E
Sbjct: 424 PNAGLTMNYCRNPDADKSPWCYTTDPRVRWEFCNLKKCSETPEQVPAAPQAPGVE 478

>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 20) (ADAM-TS
            20) (ADAM-TS20)
          Length = 1906

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +2

Query: 182  CPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTT 286
            C     PRTHK C S +     SWK+   KEC  T
Sbjct: 1452 CSHLHKPRTHKACRSGRCP---SWKANKWKECSVT 1483

>NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein) (Nucleoporin Nup84)
          Length = 742

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 247 VMEVEIR*GVCNNSPAESTSPENGWR*SARPTPGHLGERH 366
           V+ + +R G+ N SPAE+  P      S  P P HL  R+
Sbjct: 22  VVFLRLREGLKNQSPAEADKPATSTSPSCPPLPPHLPTRN 61

>SAYP_DROME (Q9VWF2) Supporter of activation of yellow protein (Protein enhancer|
            of yellow 3)
          Length = 2006

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +2

Query: 155  RDEPEAGLRCPTAR*PRTHKGCWSI--KTAGR---WSWKSKSAKECV 280
            RD PEA +RC T R  R H  C  +  +  GR   ++W+    K C+
Sbjct: 1707 RDMPEAFIRCYTCR-KRVHPSCVDMPPRMVGRVRNYNWQCAGCKCCI 1752

>SYQ_CHRVO (Q7NX86) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 560

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
 Frame = -2

Query: 282 VTHSLADFDFHDHRPA-------VLIDQHP 214
           +THSL   +F DHRP        + I+ HP
Sbjct: 227 ITHSLCSLEFEDHRPLYDWVLDNISIEHHP 256

>CCNL1_CHICK (Q5ZJP9) Cyclin-L1|
          Length = 534

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 76  GSAASVSRATESGAPSGPFLVSRTGDAG*TGSRVTVP 186
           GSAA+V+ A   G P+GP     T  A  TGS   VP
Sbjct: 6   GSAAAVA-AVAGGGPAGPHAAGVTAGAVTTGSGAPVP 41

>OPA1_MOUSE (P58281) Dynamin-like 120 kDa protein, mitochondrial precursor|
           (Large GTP-binding protein) (LargeG)
          Length = 960

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 242 RWS-WKSKSAKECVTTHLPNQLAPKMDGAEARDPHPAIWAS 361
           RW  WK+++ ++CV     N+L   +   +  D HPA  AS
Sbjct: 774 RWMYWKNRTQEQCVHNETKNELEKML---KVNDEHPAYLAS 811

>CYSH_NEIMA (Q9JUD5) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8)|
           (PAPS reductase, thioredoxin dependent) (PAdoPS
           reductase) (3'-phosphoadenylylsulfate reductase) (PAPS
           sulfotransferase)
          Length = 244

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 236 AGRWSWKSKSAKEC 277
           AGRW W+ K++KEC
Sbjct: 227 AGRWWWEDKNSKEC 240

>GRP33_ARTSA (P13230) Glycine-rich protein GRP33|
          Length = 308

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +3

Query: 135 GKQNWRCGMNRKPGYGAQ-LRANLEPTRGVGRLRQQDGGHGSRNP 266
           G   W     R  G GA+  R  L+ +RG G+     GG G   P
Sbjct: 263 GNAGWTASPGRGAGAGARGARGGLDQSRGGGKFPSARGGRGRAAP 307

>SOX10_CHICK (Q9W757) Transcription factor SOX-10 (cSOX10)|
          Length = 461

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 133 KMAHLEHPIPWHGSPKQPSHPTY 65
           K AHL+H  P  GSP    HP +
Sbjct: 201 KNAHLDHRHPGEGSPMSDGHPEH 223

>FINC_PLEWA (Q91289) Fibronectin (FN) (Fragment)|
          Length = 1328

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 105  GIGCSKWAIFGKQNWRCGMNRKPGYG 182
            G  CS     G+Q WRC   R+PG G
Sbjct: 1265 GAICSCTCYGGQQGWRCDNCRRPGAG 1290

>CRBB1_CHICK (P07530) Beta crystallin B1 (Beta-35)|
          Length = 238

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = -2

Query: 273 SLADFDFHDHRPAVLIDQHPLWVLG*RAVGHRNPASGSSRIASSAYQKWPTWSTRFRGTA 94
           +LAD  F D   +V++   P WV    A    N       +    Y +W TWS+ +R   
Sbjct: 69  NLADCGF-DRVRSVIVSSGP-WV----AYEQANMRGEMFILEKGEYPRWDTWSSSYRSDC 122

Query: 93  HRSSRAI 73
             S R I
Sbjct: 123 FMSMRPI 129

>MUCAP_PIG (P12021) Apomucin (Mucin core protein) (Fragment)|
          Length = 1150

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
 Frame = +1

Query: 79  SAASVSRATESGAPSGPFLVSRTGDAG*TGSRVTVPNCALT*NPQGVLVD*DSR-TVVME 255
           ++ S S  T SGA       SRTG  G        P  + T    GVL++  +R T +  
Sbjct: 592 ASGSSSTGTTSGASDSQVTGSRTGTTGVVLGTTVAPGSSSTGATTGVLINEGTRSTSLGT 651

Query: 256 VEIR*GVCNNSPAESTSPENG 318
             +  G    S   ++ P  G
Sbjct: 652 TRVASGTTYESGTSNSVPSGG 672

>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34)
          Length = 293

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 145 FCLPKMAHLEHPIPWHGSPKQPSHPTYLKFENRSRTL 35
           F  P+  H E    W+   KQPS+P+  ++ NR+RTL
Sbjct: 120 FMPPEKVHKELFKDWNIPFKQPSYPSVKRY-NRNRTL 155

>Y2543_HALSA (Q9HMH2) Protein Vng2543c|
          Length = 210

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +3

Query: 201 LEPTRGVGRLRQQDGGHGSRNPL 269
           LE TRG GRLR   G HGS + L
Sbjct: 54  LESTRGRGRLRGCAGAHGSIHEL 76

>YADA_YERPS (P10858) Adhesin yadA precursor|
          Length = 432

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
 Frame = -3

Query: 164 VHPASPVLLTKN------GPLGAPDSVARLTEAAEPSYL 66
           ++PA P+L  +N      GP G     ARL EA +P  L
Sbjct: 55  LYPAKPILRQENPKLPPRGPQGPEKKRARLAEAIQPQVL 93

>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)|
           (DRF1) (mDIA1) (p140mDIA)
          Length = 1255

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 20/61 (32%), Positives = 24/61 (39%)
 Frame = -1

Query: 253 P*PPSCCLNRPTPLVGSRLARSWAP*PGFRFIPHRQFCLPKMAHLEHPIPWHGSPKQPSH 74
           P PP  C+  P PL G          PG   IP     LP +A +  P P  G+   P  
Sbjct: 604 PLPPGTCIPPPPPLPGGACIPPPPQLPGSAAIPPPP-PLPGVASIPPPPPLPGATAIPPP 662

Query: 73  P 71
           P
Sbjct: 663 P 663

>RS13_THEVO (Q97B96) 30S ribosomal protein S13P|
          Length = 171

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 156 GMNRKPGYGAQLRANLEPTRGVGRLRQQD 242
           G+  + GY    R NL+PT+ +G L++ +
Sbjct: 54  GIGLRLGYAIAERLNLQPTKKIGELKEDE 82


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,411,626
Number of Sequences: 219361
Number of extensions: 1390762
Number of successful extensions: 3503
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3502
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)