ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast40h03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MYCN_MARMO (Q61976) N-myc proto-oncogene protein (N-myc1) 36 0.034
2MYCN_HUMAN (P04198) N-myc proto-oncogene protein 35 0.098
3ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P... 33 0.22
4ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P... 33 0.22
5KPCE_RABIT (P10830) Protein kinase C epsilon type (EC 2.7.11.13)... 32 0.83
6EMIL1_HUMAN (Q9Y6C2) EMILIN-1 precursor (Elastin microfibril int... 32 0.83
7EMIL1_MOUSE (Q99K41) EMILIN-1 precursor (Elastin microfibril int... 32 0.83
8CEBPA_BOVIN (O02754) CCAAT/enhancer-binding protein alpha (C/EBP... 31 1.1
9SYA_MYCPA (P61705) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 31 1.4
10PO4F1_HUMAN (Q01851) POU domain, class 4, transcription factor 1... 31 1.4
11PGCA_HUMAN (P16112) Aggrecan core protein precursor (Cartilage-s... 30 1.9
12KPCE_RAT (P09216) Protein kinase C epsilon type (EC 2.7.11.13) (... 30 2.4
13KPCE_MOUSE (P16054) Protein kinase C epsilon type (EC 2.7.11.13)... 30 2.4
14ARGR_MYCPA (Q740I4) Arginine repressor 30 2.4
15HLES_DROME (Q02308) Protein hairless 27 3.1
16MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL) 30 3.2
17KPCE_HUMAN (Q02156) Protein kinase C epsilon type (EC 2.7.11.13)... 29 4.1
18S12A2_MOUSE (P55012) Solute carrier family 12 member 2 (Bumetani... 29 4.1
19DNAJ_THET2 (Q72GN6) Chaperone protein dnaJ 29 4.1
20DNAJ1_THET8 (Q5SLW9) Chaperone protein dnaJ 1 29 4.1
21IE18_PRVKA (P33479) Immediate-early protein IE180 29 5.4
22IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2 29 5.4
23NPB_HUMAN (Q8NG41) Neuropeptide B precursor (Preproprotein L7) (... 29 5.4
24FOXD3_MOUSE (Q61060) Forkhead box protein D3 (HNF3/FH transcript... 28 7.1
25RUVA_SILPO (Q5LNT7) Holliday junction ATP-dependent DNA helicase... 28 7.1
26IE18_PRVIF (P11675) Immediate-early protein IE180 28 7.1
27G3P_CLOPA (Q59309) Glyceraldehyde-3-phosphate dehydrogenase (EC ... 28 7.1
28TRPD_THETH (P83827) Anthranilate phosphoribosyltransferase (EC 2... 28 7.1
29TRPD_THET8 (Q5SH88) Anthranilate phosphoribosyltransferase (EC 2... 28 7.1
30PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS5... 28 7.1
31GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding f... 28 9.2
32HYDL_STRCO (P42534) Putative polyketide hydroxylase (EC 1.14.13.... 28 9.2
33RORA_MOUSE (P51448) Nuclear receptor ROR-alpha (Nuclear receptor... 28 9.2
34PO4F1_MOUSE (P17208) POU domain, class 4, transcription factor 1... 28 9.2
35ANF_FUGRU (Q805D8) Atrial natriuretic factor precursor (ANF) (At... 28 9.2

>MYCN_MARMO (Q61976) N-myc proto-oncogene protein (N-myc1)|
          Length = 460

 Score = 36.2 bits (82), Expect = 0.034
 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -3

Query: 331 PELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGG-AGRALVAVDARLQLP 176
           P  A  A PGAG A  AG  HG   G G+ GA LP   A  A   VD  +  P
Sbjct: 141 PPAAGPATPGAGAANPAGRGHGGTAGAGRAGAALPAELAHPAAECVDPAVVFP 193



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>MYCN_HUMAN (P04198) N-myc proto-oncogene protein|
          Length = 464

 Score = 34.7 bits (78), Expect = 0.098
 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 307 PGAGIAATAGEAHGPVDGRGQRGAELPGG-AGRALVAVDARLQLP 176
           PGAG A+ AG  HG   G G+ GA LP   A  A   VD  +  P
Sbjct: 150 PGAGAASPAGRGHGGAAGAGRAGAALPAELAHPAAECVDPAVVFP 194



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>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 16/67 (23%)
 Frame = -3

Query: 367 RAHLRRCRLPAAPELAVHARP--------------GAGIAA--TAGEAHGPVDGRGQRGA 236
           R   R  RLPAAP  A  A+               G G+AA  TAG   G  +GRG+R A
Sbjct: 389 RGGRRDPRLPAAPRAAPAAQARACSPEPREEGRGAGLGVAAGETAGWGVGSEEGRGERRA 448

Query: 235 ELPGGAG 215
           +L G AG
Sbjct: 449 KLLGEAG 455



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>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 16/67 (23%)
 Frame = -3

Query: 367 RAHLRRCRLPAAPELAVHARP--------------GAGIAA--TAGEAHGPVDGRGQRGA 236
           R   R  RLPAAP  A  A+               G G+AA  TAG   G  +GRG+R A
Sbjct: 389 RGGRRDPRLPAAPRAAPAAQARACSPEPREEGRGAGLGVAAGETAGWGAGSEEGRGERRA 448

Query: 235 ELPGGAG 215
            L G AG
Sbjct: 449 RLLGEAG 455



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>KPCE_RABIT (P10830) Protein kinase C epsilon type (EC 2.7.11.13)|
           (nPKC-epsilon)
          Length = 736

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = -3

Query: 355 RRCRLPAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGA 218
           RRC    AP   V AR  A + A  G     +   GQR  +L GGA
Sbjct: 282 RRCETNVAPNCGVDARGIAKVLADLGVTPDKITNSGQRRKKLIGGA 327



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>EMIL1_HUMAN (Q9Y6C2) EMILIN-1 precursor (Elastin microfibril interface-located|
           protein 1) (Elastin microfibril interfacer 1)
          Length = 1016

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 22/62 (35%), Positives = 27/62 (43%)
 Frame = -3

Query: 370 LRAHLRRCRLPAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGAGRALVAVDA 191
           LR  + RC  P  P     A PG G     G + GP+DG    G    G +G AL A+  
Sbjct: 595 LRDGVERCSCPLLPPRGPGAGPGVG-----GPSRGPLDGFSVFG----GSSGSALQALQG 645

Query: 190 RL 185
            L
Sbjct: 646 EL 647



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>EMIL1_MOUSE (Q99K41) EMILIN-1 precursor (Elastin microfibril interface-located|
           protein 1) (Elastin microfibril interfacer 1)
          Length = 1017

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 22/62 (35%), Positives = 27/62 (43%)
 Frame = -3

Query: 370 LRAHLRRCRLPAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGAGRALVAVDA 191
           LR  + RC  P  P     A PG G     G + GP+DG    G    G +G AL A+  
Sbjct: 596 LRDGVERCSCPLLPPRGPGAGPGVG-----GPSRGPLDGFSVFG----GSSGSALQALQG 646

Query: 190 RL 185
            L
Sbjct: 647 EL 648



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>CEBPA_BOVIN (O02754) CCAAT/enhancer-binding protein alpha (C/EBP alpha)|
          Length = 353

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
 Frame = -3

Query: 427 PPAHPVVEWPEVLH*GHPHLRAHLRRCRLPAAPELAVHARPGAGI-AATAGEAHGPVDGR 251
           PP  P    P   H   PHL+  +  C      +  +H +PG      T   +  P    
Sbjct: 183 PPPPPPNSHPPPAHLAAPHLQFQIAHC-----GQTTMHLQPGHPTPPPTPVPSPHPAPAL 237

Query: 250 GQRGAELPGGAGRALVAVDARLQ 182
           G  G   PGGA + LVA    L+
Sbjct: 238 GAAGLPGPGGALKGLVATHPDLR 260



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>SYA_MYCPA (P61705) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 900

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -3

Query: 340 PAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGAGRALVAVDARLQLPR 173
           PAA +L + A           +   PVDGRG   A+L  G+G+    +DA L   R
Sbjct: 841 PAAQDLGIRAND------LVKQLAAPVDGRGGGKADLAQGSGKDPAGIDAALDAVR 890



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>PO4F1_HUMAN (Q01851) POU domain, class 4, transcription factor 1|
           (Brain-specific homeobox/POU domain protein 3A) (Brn-3A)
           (Oct-T1) (Homeobox/POU domain protein RDC-1)
          Length = 423

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -3

Query: 337 AAPELAVHARPG----AGIAATAGEAH-GPVDGRGQRGAELPGGAG 215
           ++P LA+ A  G    AG AA  G AH GP  G G  G   PGG G
Sbjct: 121 SSPSLALMAGAGGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGG 166



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>PGCA_HUMAN (P16112) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP) (Chondroitin sulfate
            proteoglycan core protein 1) [Contains: Aggrecan core
            protein 2]
          Length = 2415

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +2

Query: 104  NGGPGMEDAAATLATELDGLLAMARELEARVDGDQ---GAPGAARELCSALAASVD 262
            +GG G+E +A+ + T+L GL +    LE    G +   G P    +L  + +  +D
Sbjct: 1435 SGGEGLETSASEVGTDLSGLPSGREGLETSASGAEDLSGLPSGKEDLVGSASGDLD 1490



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>KPCE_RAT (P09216) Protein kinase C epsilon type (EC 2.7.11.13)|
           (nPKC-epsilon)
          Length = 737

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = -3

Query: 355 RRCRLPAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGA 218
           RRC    AP   V AR  A + A  G     +   GQR  +L  GA
Sbjct: 282 RRCETNVAPNCGVDARGIAKVLADLGVTPDKITNSGQRRKKLAAGA 327



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>KPCE_MOUSE (P16054) Protein kinase C epsilon type (EC 2.7.11.13)|
           (nPKC-epsilon)
          Length = 737

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = -3

Query: 355 RRCRLPAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGA 218
           RRC    AP   V AR  A + A  G     +   GQR  +L  GA
Sbjct: 282 RRCETNVAPNCGVDARGIAKVLADLGVTPDKITNSGQRRKKLAAGA 327



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>ARGR_MYCPA (Q740I4) Arginine repressor|
          Length = 164

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
 Frame = +2

Query: 14  SECESETRKARALTVSSGATDRSVS*VRALNGGPGMEDAAATLATELDGLLA-------- 169
           +E     R+AR + + S A  RS S + AL    G+E   ATL+ +L+ L A        
Sbjct: 8   TETTRAARQARIVAILSSAQVRSQSELAALLADEGIEVTQATLSRDLEELGAVKLRGADG 67

Query: 170 -----MARELEARVDGDQGAPGAARELCSALAASVD 262
                M  E  + V G  G       L S L  S D
Sbjct: 68  GVGVYMVPEDGSPVRGVSGGTARLSRLLSELLVSAD 103



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>HLES_DROME (Q02308) Protein hairless|
          Length = 1077

 Score = 26.6 bits (57), Expect(2) = 3.1
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -3

Query: 337  AAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGAGRALVAVDA 191
            A+P L+ H +PG   AA A  A   +  +    A    G G A+ A  A
Sbjct: 923  ASPLLSPHPQPGGSAAAAAAAAAARLSPQSAYHAFAYNGVGAAVAAAAA 971



 Score = 21.6 bits (44), Expect(2) = 3.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 414 PSSSGPRSCIEATRTCVRTFAAAAFLP 334
           P+S+ P S   A        AAAA++P
Sbjct: 868 PTSAPPTSNSSAAAVAAAAAAAAAYIP 894



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>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)|
          Length = 1147

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 19/43 (44%), Positives = 19/43 (44%)
 Frame = -3

Query: 340  PAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGAGR 212
            P  P       PGAG     G   GP  GRG  G   PGGAGR
Sbjct: 1015 PGGPGRGGPGGPGAG----RGGPGGPGAGRGGPGMGGPGGAGR 1053



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>KPCE_HUMAN (Q02156) Protein kinase C epsilon type (EC 2.7.11.13)|
           (nPKC-epsilon)
          Length = 737

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = -3

Query: 355 RRCRLPAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGA 218
           RRC    AP   V AR  A + A  G     +   GQR  +L  GA
Sbjct: 282 RRCETNVAPNCGVDARGIAKVLADLGVTPDKITNSGQRRKKLIAGA 327



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>S12A2_MOUSE (P55012) Solute carrier family 12 member 2 (Bumetanide-sensitive|
           sodium-(potassium)-chloride cotransporter 1)
           (Basolateral Na-K-Cl symporter)
          Length = 1205

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 19/43 (44%), Positives = 19/43 (44%)
 Frame = -3

Query: 340 PAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGAGR 212
           PA P LA  ARPG G AA      GP       G E    AGR
Sbjct: 5   PAGPRLAPAARPGWGRAAGCRRRGGPARHGRASGQEDATTAGR 47



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>DNAJ_THET2 (Q72GN6) Chaperone protein dnaJ|
          Length = 350

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
 Frame = -3

Query: 379 HPHLRAH----LRRCRLPAAPELAVHAR---PGAG----IAATAGEAHGPVDGRGQRGAE 233
           HPHL       + R RL  A + A+ AR   PG      +    G  HG V      G  
Sbjct: 236 HPHLERQGPDLVYRLRLGLA-QAALGARVVVPGLEGPIPLDIPPGTGHGEVFALEGGGLP 294

Query: 232 LPGGAGRALVAVDARLQLPR 173
           LPGG GR  + V   L +P+
Sbjct: 295 LPGGRGRGTLRVVVELAVPK 314



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>DNAJ1_THET8 (Q5SLW9) Chaperone protein dnaJ 1|
          Length = 350

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
 Frame = -3

Query: 379 HPHLRAH----LRRCRLPAAPELAVHAR---PGAG----IAATAGEAHGPVDGRGQRGAE 233
           HPHL       + R RL  A + A+ AR   PG      +    G  HG V      G  
Sbjct: 236 HPHLERQGPDLVYRLRLGLA-QAALGARVEVPGLEGPIPLDIPPGTGHGEVFALEGGGLP 294

Query: 232 LPGGAGRALVAVDARLQLPR 173
           LPGG GR  + V   L +P+
Sbjct: 295 LPGGRGRGTLRVVVELAVPK 314



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>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 20/54 (37%), Positives = 21/54 (38%)
 Frame = -3

Query: 382 GHPHLRAHLRRCRLPAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGG 221
           G P   A  R    PA P     A    G A+ A  A GPV   G  GA   GG
Sbjct: 199 GEPGPAARPRTPAPPAQPAAVAAAPARRGPASPASPAAGPVSAPGGGGAPSAGG 252



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>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -3

Query: 340 PAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGA 218
           PAAPE        A  +  A    GP  G  + GA  PGGA
Sbjct: 139 PAAPEFTAPPAAPAAPSTPAPAPSGPKPGGARPGAPKPGGA 179



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>NPB_HUMAN (Q8NG41) Neuropeptide B precursor (Preproprotein L7) (hPPL7)|
           [Contains: Neuropeptide B-23 (NPB23) (hL7); Neuropeptide
           B-29 (NPB29) (hL7C)]
          Length = 125

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 11/61 (18%)
 Frame = -3

Query: 364 AHLRRCRLPAAPELAVHARPGAGIAA-TAGEAHGPVDG--------RGQ--RGAELPGGA 218
           A L  C L A P LA + +P AG ++ + G A G + G        R Q  RGAE PGGA
Sbjct: 10  AALALCLLLAPPGLAWY-KPAAGHSSYSVGRAAGLLSGLRRSPYARRSQPYRGAEPPGGA 68

Query: 217 G 215
           G
Sbjct: 69  G 69



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>FOXD3_MOUSE (Q61060) Forkhead box protein D3 (HNF3/FH transcription factor|
           genesis) (Hepatocyte nuclear factor 3 forkhead homolog
           2) (HFH-2)
          Length = 465

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 17/43 (39%), Positives = 19/43 (44%)
 Frame = -3

Query: 337 AAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGAGRA 209
           A P  ++    GAG AA  G A G   G G  G    GG G A
Sbjct: 358 ARPSFSIENIIGAGSAAPGGSAGGGGSGGGAGGGGGSGGGGGA 400



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>RUVA_SILPO (Q5LNT7) Holliday junction ATP-dependent DNA helicase ruvA (EC|
           3.6.1.-)
          Length = 224

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 10/66 (15%)
 Frame = -3

Query: 340 PAAPELAVHARPGAGIAATAGE-------AHGPVDGR---GQRGAELPGGAGRALVAVDA 191
           PAAP     A PG   AATAG         +GP D      Q  AE P      L+    
Sbjct: 158 PAAPAPRKAAPPGGAGAATAGALSALSNLGYGPSDAAAAVAQAAAEAPEAGETDLIRAAL 217

Query: 190 RLQLPR 173
           RL  P+
Sbjct: 218 RLLAPK 223



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>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 20/54 (37%), Positives = 21/54 (38%)
 Frame = -3

Query: 382 GHPHLRAHLRRCRLPAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGG 221
           G P   A  R    PA P     A    G A+ A  A GPV   G  GA   GG
Sbjct: 207 GEPGPAARPRTPAPPAQPAAVAAAPARRGPASPASPAAGPVSAPGGGGAPSGGG 260



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>G3P_CLOPA (Q59309) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)|
           (GAPDH) (CP 17/CP 18)
          Length = 334

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 18/60 (30%), Positives = 25/60 (41%)
 Frame = -3

Query: 376 PHLRAHLRRCRLPAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGAGRALVAV 197
           PH +   RR R  A   +         IA    E  G +DG  QR   +P G+   L++V
Sbjct: 189 PHRKGDFRRARAAAVSIIPNSTGAAKAIAQVIPELKGKLDGNAQR-VPVPTGSVTELISV 247



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>TRPD_THETH (P83827) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)|
          Length = 329

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 17/84 (20%)
 Frame = -3

Query: 376 PHLRAHLRRCRLPAAPELAVHARPGAGIAATAGEAHG-----------------PVDGRG 248
           PH  A + R    AA  L VH RP   I  T G+  G                  V   G
Sbjct: 49  PHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHG 108

Query: 247 QRGAELPGGAGRALVAVDARLQLP 176
            R A    G+   L A+   L+ P
Sbjct: 109 NRAASSRAGSADLLEALGVDLEAP 132



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>TRPD_THET8 (Q5SH88) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)|
          Length = 329

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 17/84 (20%)
 Frame = -3

Query: 376 PHLRAHLRRCRLPAAPELAVHARPGAGIAATAGEAHG-----------------PVDGRG 248
           PH  A + R    AA  L VH RP   I  T G+  G                  V   G
Sbjct: 49  PHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHG 108

Query: 247 QRGAELPGGAGRALVAVDARLQLP 176
            R A    G+   L A+   L+ P
Sbjct: 109 NRAASSRAGSADLLEALGVDLEAP 132



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>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor|
          Length = 1901

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -3

Query: 304 GAGIAATAGEAHGPVDGRGQRGAELPGGAG 215
           GAG A   G+A GP    G  G   PGGAG
Sbjct: 140 GAGAAGAPGQAGGPGGPAGLWGNGGPGGAG 169



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>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)|
          Length = 449

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = -3

Query: 313 ARPGAGIAATAGEAHGPVDGRGQRGAELPGGAGRALVAVDAR 188
           A PG   A+     +G   G    GA  PGGAG A   V AR
Sbjct: 75  AHPGWPQASADSPPYGSGGGAAGGGAAGPGGAGSAAAHVSAR 116



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>HYDL_STRCO (P42534) Putative polyketide hydroxylase (EC 1.14.13.-) (WhiE ORF|
           VIII)
          Length = 627

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = -3

Query: 346 RLPAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGAGR 212
           R P A   +  A   +   +  G A  PV G G  GA  PGGAGR
Sbjct: 366 RRPVAEATSARAAHRSVEHSHPGFAPPPVAGGGGPGAGTPGGAGR 410



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>RORA_MOUSE (P51448) Nuclear receptor ROR-alpha (Nuclear receptor RZR-alpha)|
          Length = 523

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -3

Query: 340 PAAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGAGRALVAVDAR 188
           PAAP+ A      +G  A AG    P+     R +E PG   R   A  +R
Sbjct: 5   PAAPDPAASEPGSSGSEAAAGSRETPLTQDTGRKSEAPGAGRRQSYASSSR 55



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>PO4F1_MOUSE (P17208) POU domain, class 4, transcription factor 1|
           (Brain-specific homeobox/POU domain protein 3A) (Brn-3A)
           (Brn-3.0)
          Length = 421

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = -3

Query: 337 AAPELAVHARPGAGIAATAGEAHGPVDGRGQRGAELPGGAG 215
           ++P LA+ A  GAG A  AG   G  DG G  G   PGG G
Sbjct: 121 SSPSLALMA--GAGGAGAAGGGGGAHDGPGGGGG--PGGGG 157



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>ANF_FUGRU (Q805D8) Atrial natriuretic factor precursor (ANF) (Atrial|
           natriuretic peptide) (ANP) (Prepronatriodilatin)
          Length = 139

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 121 HARPSVQRTHLANRSISGARRDRERACF 38
           H+RPSVQR+HL +  +S   R R  +CF
Sbjct: 94  HSRPSVQRSHLQDLLMS--LRKRASSCF 119


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,259,812
Number of Sequences: 219361
Number of extensions: 584191
Number of successful extensions: 2570
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2560
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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