Clone Name	bast40g05
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK065531.1| Oryza sativa (japonica cultivar-group) cDNA clon...	343	3e-91
2	ref|XM_464852.1| Oryza sativa (japonica cultivar-group), mRNA	287	2e-74
3	ref|XM_506764.1| PREDICTED Oryza sativa (japonica cultivar-group...	287	2e-74
4	gb|AF139211.2| Oryza sativa pre-mRNA splicing factor mRNA, compl...	287	2e-74
5	dbj|AK099051.1| Oryza sativa (japonica cultivar-group) cDNA clon...	287	2e-74
6	dbj|AK062577.1| Oryza sativa (japonica cultivar-group) cDNA clon...	287	2e-74
7	dbj|AB110200.1| Oryza sativa (japonica cultivar-group) mRNA for ...	264	2e-67
8	gb|AY105970.1| Zea mays PCO109569 mRNA sequence	226	5e-56
9	gb|BT016700.1| Zea mays clone Contig533 mRNA sequence	216	5e-53
10	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	163	6e-37
11	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	163	6e-37
12	emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396...	163	6e-37
13	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	149	9e-33
14	dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic D...	149	9e-33
15	dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic D...	149	9e-33
16	gb|AY109715.1| Zea mays CL333_1 mRNA sequence	84	5e-13
17	dbj|AK102518.1| Oryza sativa (japonica cultivar-group) cDNA clon...	54	4e-04
18	ref|NM_115404.1| Arabidopsis thaliana SCL30; RNA binding / nucle...	52	0.002
19	emb|AJ293798.1|ATH293798 Arabidopsis thaliana mRNA for SC35-like...	52	0.002
20	gb|AY128836.1| Arabidopsis thaliana putative RNA binding protein...	52	0.002
21	gb|AY099649.1| Arabidopsis thaliana putative RNA binding protein...	52	0.002
22	emb|BX824297.1|CNS0A5MO Arabidopsis thaliana Full-length cDNA Co...	52	0.002
23	emb|BX823425.1|CNS0A5EO Arabidopsis thaliana Full-length cDNA Co...	52	0.002
24	gb|AY086131.1| Arabidopsis thaliana clone 21694 mRNA, complete s...	52	0.002
25	emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, B...	52	0.002
26	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	44	0.40
27	ref|XM_445151.1| Candida glabrata CBS138, CAGL0B04169g partial mRNA	44	0.40
28	emb|CR380948.1| Candida glabrata strain CBS138 chromosome B comp...	44	0.40
29	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	44	0.40
30	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	44	0.40
31	gb|AC095015.1| Drosophila melanogaster, chromosome 3R, region 84...	42	1.6
32	gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT...	42	1.6
33	gb|AE003673.3| Drosophila melanogaster chromosome 3R, section 11...	42	1.6
34	gb|AC002513.1|AC002513 Drosophila melanogaster (P1 DS08322 (D15)...	42	1.6
35	gb|AY426813.1| Parryella filifolia internal transcribed spacer 1...	40	6.3
36	gb|AY426803.1| Errazurizia rotundata internal transcribed spacer...	40	6.3
37	gb|AY426775.1| Amorpha georgiana internal transcribed spacer 1, ...	40	6.3
38	gb|AY426774.1| Amorpha fruticosa internal transcribed spacer 1, ...	40	6.3
39	gb|AY426773.1| Amorpha canescens internal transcribed spacer 1, ...	40	6.3
40	gb|AY426771.1| Amorpha apiculata internal transcribed spacer 1, ...	40	6.3
41	gb|DQ178997.1| Streptomyces clavuligerus glyceraldehyde-3-phosph...	40	6.3
42	gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete ...	40	6.3
43	gb|AY186756.1| Arabidopsis lyrata S-related kinase 9 gene, exon ...	40	6.3
44	emb|BX897699.1| Bartonella henselae strain Houston-1, complete g...	40	6.3
45	gb|AF156658.1|AF156658 Ambystoma mexicanum MHC class I heavy cha...	40	6.3
46	gb|AF156657.1|AF156657 Ambystoma mexicanum MHC class I heavy cha...	40	6.3
47	gb|AF156656.1|AF156656 Ambystoma mexicanum MHC class I heavy cha...	40	6.3
48	gb|AF369529.1|AF369529 Bartonella henselae strain San Ant 2 16S ...	40	6.3
49	gb|AF369528.1|AF369528 Bartonella henselae strain 90-615 16S rib...	40	6.3
50	gb|AF369527.1|AF369527 Bartonella henselae strain CAL-1 16S ribo...	40	6.3
51	gb|AF312496.1|AF312496 Bartonella henselae isolate URBHLIE 9 16S...	40	6.3
52	gb|AF312495.1|AF312495 Bartonella henselae isolate URBHLLY 8 16S...	40	6.3
53	gb|U59890.1|AFU59890 Amorpha fruticosa 5.8S ribosomal RNA gene a...	40	6.3
54	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.3
55	gb|AC016689.4| Homo sapiens BAC clone RP11-81H20 from 2, complet...	40	6.3
56	dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic D...	40	6.3
57	dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic D...	40	6.3
58	dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome	40	6.3
59	emb|AJ457178.1|BHE457178 Bartonella henselae tRNA-Ile gene, IGS ...	40	6.3
60	emb|AJ457177.1|BHE457177 Bartonella henselae tRNA-Ile gene, IGS ...	40	6.3
61	emb|AJ439688.1|BHE439688 Bartonella henselae partial 16S rRNA ge...	40	6.3
62	emb|AJ439687.1|BHE439687 Bartonella henselae partial 16S rRNA ge...	40	6.3
63	emb|AJ441257.1|BHE441257 Bartonella henselae tRNA-Ile gene for t...	40	6.3
64	emb|AJ441256.1|BHE441256 Bartonella henselae tRNA-Ile gene for t...	40	6.3
65	gb|AY108472.1| Zea mays PCO119082 mRNA sequence	40	6.3
66	gb|U83138.1|AMU83138 Ambystoma mexicanum MHC class IA alpha chai...	40	6.3
67	gb|L35101.1|BAO16SRB Baronella henselae 16S-23S intergenic space...	40	6.3
68	gb|AC140244.3| Mus musculus BAC clone RP24-285J23 from 14, compl...	40	6.3
69	gb|AC124846.2| Homo sapiens chromosome 5 clone CTC-339C6, comple...	40	6.3

---

>dbj|AK065531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034H02, full
           insert sequence
          Length = 1250

 Score =  343 bits (173), Expect = 3e-91
 Identities = 256/282 (90%), Gaps = 4/282 (1%)
 Strand = Plus / Plus

                                                                       
Query: 184 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
           ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||   |
Sbjct: 111 cgcagtccccctaggaggggctatggtggcagaggaagaagtccccctaggagggg---a 167

                                                                       
Query: 244 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 303
           ||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 168 tatggaggacggagggagcagggttctggaagtctcttggtccgcaacatcccattaagc 227

                                                                       
Query: 304 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 363
             ||||| ||||||||| || ||||||||||||||||||||||||||| |||||||||||
Sbjct: 228 tgcagaggggaggatcttcgagttccttttgaaaggtttggtcctgttcgggatgtttac 287

                                                                       
Query: 364 cttccgaaggattattacagcggngagccacgagggtttgcgtttgtggagtttgttgac 423
           || || ||||||||||||||||| || ||||| || ||||| ||||||||||| ||||||
Sbjct: 288 ctgccaaaggattattacagcggggaaccacggggatttgcatttgtggagttcgttgac 347

                                                     
Query: 424 ccttatgacgcctctgaggc-ccatatcacatgaatcgccag 464
           |||||||| ||||||||||| | |||||||||||||||||||
Sbjct: 348 ccttatgatgcctctgaggctcaatatcacatgaatcgccag 389



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 76  atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 125
           ||||||||||||||||| ||| | || |||||||| |||||||| |||||
Sbjct: 87  atgaggaggtacagcccaccatatcgcagtccccctaggaggggctatgg 136



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 140 atcgtagtcccccaaggaggggatatggtggcag 173
           |||| |||||||| |||||||| |||||||||||
Sbjct: 109 atcgcagtccccctaggaggggctatggtggcag 142

---

>ref|XM_464852.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1176

 Score =  287 bits (145), Expect = 2e-74
 Identities = 246/278 (88%), Gaps = 4/278 (1%)
 Strand = Plus / Plus

                                                                       
Query: 184 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||   |
Sbjct: 151 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagggg---a 207

                                                                       
Query: 244 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 303
           ||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||  |||||
Sbjct: 208 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagc 267

                                                                       
Query: 304 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 363
             |||||||||||||||  | |||||||||||||||||||| |||||| | |||||||||
Sbjct: 268 tgcagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttac 327

                                                                       
Query: 364 cttccgaaggattattacagcggngagccacgagggtttgcgtttgtggagtttgttgac 423
           || || ||||||||||| | ||| || || ||||||||||| || |||||||||||||||
Sbjct: 328 ctgccaaaggattattataccggggaaccgcgagggtttgcattcgtggagtttgttgac 387

                                                 
Query: 424 ccttatgacgcctctgaggccc-atatcacatgaatcg 460
           |||||||| || |||||||||| |||||| ||||||||
Sbjct: 388 ccttatgatgcttctgaggcccaatatcatatgaatcg 425



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 140 atcgtagtcccccaaggaggggatatggtggcag 173
           |||| ||||| |||||||||||||||||||||||
Sbjct: 149 atcgcagtccaccaaggaggggatatggtggcag 182

---

>ref|XM_506764.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1113_G05.32
           mRNA
          Length = 1265

 Score =  287 bits (145), Expect = 2e-74
 Identities = 246/278 (88%), Gaps = 4/278 (1%)
 Strand = Plus / Plus

                                                                       
Query: 184 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||   |
Sbjct: 150 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagggg---a 206

                                                                       
Query: 244 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 303
           ||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||  |||||
Sbjct: 207 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagc 266

                                                                       
Query: 304 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 363
             |||||||||||||||  | |||||||||||||||||||| |||||| | |||||||||
Sbjct: 267 tgcagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttac 326

                                                                       
Query: 364 cttccgaaggattattacagcggngagccacgagggtttgcgtttgtggagtttgttgac 423
           || || ||||||||||| | ||| || || ||||||||||| || |||||||||||||||
Sbjct: 327 ctgccaaaggattattataccggggaaccgcgagggtttgcattcgtggagtttgttgac 386

                                                 
Query: 424 ccttatgacgcctctgaggccc-atatcacatgaatcg 460
           |||||||| || |||||||||| |||||| ||||||||
Sbjct: 387 ccttatgatgcttctgaggcccaatatcatatgaatcg 424



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 140 atcgtagtcccccaaggaggggatatggtggcag 173
           |||| ||||| |||||||||||||||||||||||
Sbjct: 148 atcgcagtccaccaaggaggggatatggtggcag 181

---

>gb|AF139211.2| Oryza sativa pre-mRNA splicing factor mRNA, complete cds
          Length = 1190

 Score =  287 bits (145), Expect = 2e-74
 Identities = 246/278 (88%), Gaps = 4/278 (1%)
 Strand = Plus / Plus

                                                                       
Query: 184 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||   |
Sbjct: 151 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagggg---a 207

                                                                       
Query: 244 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 303
           ||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||  |||||
Sbjct: 208 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagc 267

                                                                       
Query: 304 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 363
             |||||||||||||||  | |||||||||||||||||||| |||||| | |||||||||
Sbjct: 268 tgcagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttac 327

                                                                       
Query: 364 cttccgaaggattattacagcggngagccacgagggtttgcgtttgtggagtttgttgac 423
           || || ||||||||||| | ||| || || ||||||||||| || |||||||||||||||
Sbjct: 328 ctgccaaaggattattataccggggaaccgcgagggtttgcattcgtggagtttgttgac 387

                                                 
Query: 424 ccttatgacgcctctgaggccc-atatcacatgaatcg 460
           |||||||| || |||||||||| |||||| ||||||||
Sbjct: 388 ccttatgatgcttctgaggcccaatatcatatgaatcg 425



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 140 atcgtagtcccccaaggaggggatatggtggcag 173
           |||| ||||| |||||||||||||||||||||||
Sbjct: 149 atcgcagtccaccaaggaggggatatggtggcag 182

---

>dbj|AK099051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151F04, full
           insert sequence
          Length = 1177

 Score =  287 bits (145), Expect = 2e-74
 Identities = 246/278 (88%), Gaps = 4/278 (1%)
 Strand = Plus / Plus

                                                                       
Query: 184 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||   |
Sbjct: 151 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagggg---a 207

                                                                       
Query: 244 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 303
           ||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||  |||||
Sbjct: 208 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagc 267

                                                                       
Query: 304 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 363
             |||||||||||||||  | |||||||||||||||||||| |||||| | |||||||||
Sbjct: 268 tgcagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttac 327

                                                                       
Query: 364 cttccgaaggattattacagcggngagccacgagggtttgcgtttgtggagtttgttgac 423
           || || ||||||||||| | ||| || || ||||||||||| || |||||||||||||||
Sbjct: 328 ctgccaaaggattattataccggggaaccgcgagggtttgcattcgtggagtttgttgac 387

                                                 
Query: 424 ccttatgacgcctctgaggccc-atatcacatgaatcg 460
           |||||||| || |||||||||| |||||| ||||||||
Sbjct: 388 ccttatgatgcttctgaggcccaatatcatatgaatcg 425



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 140 atcgtagtcccccaaggaggggatatggtggcag 173
           |||| ||||| |||||||||||||||||||||||
Sbjct: 149 atcgcagtccaccaaggaggggatatggtggcag 182

---

>dbj|AK062577.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D09, full
           insert sequence
          Length = 1265

 Score =  287 bits (145), Expect = 2e-74
 Identities = 246/278 (88%), Gaps = 4/278 (1%)
 Strand = Plus / Plus

                                                                       
Query: 184 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||   |
Sbjct: 150 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagggg---a 206

                                                                       
Query: 244 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 303
           ||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||  |||||
Sbjct: 207 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagc 266

                                                                       
Query: 304 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 363
             |||||||||||||||  | |||||||||||||||||||| |||||| | |||||||||
Sbjct: 267 tgcagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttac 326

                                                                       
Query: 364 cttccgaaggattattacagcggngagccacgagggtttgcgtttgtggagtttgttgac 423
           || || ||||||||||| | ||| || || ||||||||||| || |||||||||||||||
Sbjct: 327 ctgccaaaggattattataccggggaaccgcgagggtttgcattcgtggagtttgttgac 386

                                                 
Query: 424 ccttatgacgcctctgaggccc-atatcacatgaatcg 460
           |||||||| || |||||||||| |||||| ||||||||
Sbjct: 387 ccttatgatgcttctgaggcccaatatcatatgaatcg 424



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 140 atcgtagtcccccaaggaggggatatggtggcag 173
           |||| ||||| |||||||||||||||||||||||
Sbjct: 148 atcgcagtccaccaaggaggggatatggtggcag 181

---

>dbj|AB110200.1| Oryza sativa (japonica cultivar-group) mRNA for pre-mRNA splicing
           factor, partial cds, clone: pNS-C4A21
          Length = 1003

 Score =  264 bits (133), Expect = 2e-67
 Identities = 190/208 (91%), Gaps = 1/208 (0%)
 Strand = Plus / Plus

                                                                       
Query: 258 ggagcagggttctggaagtctcttggtccgcaacatcccactaagcgccagagcggagga 317
           |||||||||||||||||||||||||||||||||||||||| |||||  ||||| ||||||
Sbjct: 5   ggagcagggttctggaagtctcttggtccgcaacatcccattaagctgcagaggggagga 64

                                                                       
Query: 318 tctccgtgttccttttgaaaggtttggtcctgttagggatgtttaccttccgaaggatta 377
           ||| || ||||||||||||||||||||||||||| ||||||||||||| || ||||||||
Sbjct: 65  tcttcgagttccttttgaaaggtttggtcctgttcgggatgtttacctgccaaaggatta 124

                                                                       
Query: 378 ttacagcggngagccacgagggtttgcgtttgtggagtttgttgacccttatgacgcctc 437
           ||||||||| || ||||| || ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 125 ttacagcggggaaccacggggatttgcatttgtggagttcgttgacccttatgatgcctc 184

                                       
Query: 438 tgaggc-ccatatcacatgaatcgccag 464
           |||||| | |||||||||||||||||||
Sbjct: 185 tgaggctcaatatcacatgaatcgccag 212

---

>gb|AY105970.1| Zea mays PCO109569 mRNA sequence
          Length = 1186

 Score =  226 bits (114), Expect = 5e-56
 Identities = 253/297 (85%), Gaps = 7/297 (2%)
 Strand = Plus / Plus

                                                                       
Query: 171 cagccccccgcaccgcagccccccaaggaggggatatggtggcagaggaagaagtccccc 230
           |||||||||  | ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 218 cagccccccttatcgcagcccccccaggaggggatatggtggcagaggaagaagcccccc 277

                                                                       
Query: 231 tagg---aggggtggatatggaggacgaaaggagcagggttctggaagtctcttggtccg 287
           |      ||| | |||||||||||||| ||||||   |||  |||||| || ||||||||
Sbjct: 278 tcctcccaggaggggatatggaggacgcaaggag---ggtagtggaagccttttggtccg 334

                                                                       
Query: 288 caacatcccactaagcgccagagcggaggatctccgtgttccttttgaaaggtttggtcc 347
           |||||||||| |||| | ||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 335 caacatcccattaagtgtcagagcggaggatcttcgagttccttttgaaaggtttggccc 394

                                                                       
Query: 348 tgttagggatgtttaccttccgaaggattattacagcggngagccacgagggtttgcgtt 407
           |||| ||||||||||| |||| ||||| ||||||   || ||||| ||||| ||||| ||
Sbjct: 395 tgttcgggatgtttacattccaaaggactattactctggggagcctcgaggatttgcctt 454

                                                                    
Query: 408 tgtggagtttgttgacccttatgacgcctctgaggccca-tatcacatgaatcgcca 463
           ||| ||||||||||| ||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 455 tgtagagtttgttgatccttacgatgcctctgaagcccagtatcacatgaatcgcca 511



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 148 cccccaaggaggggatatggtggcag 173
           ||||| ||||||||||||||||||||
Sbjct: 237 ccccccaggaggggatatggtggcag 262



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 76  atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 125
           ||||||||||||||||||||  | || || ||||| |||||||| |||||
Sbjct: 207 atgaggaggtacagccccccttatcgcagcccccccaggaggggatatgg 256

---

>gb|BT016700.1| Zea mays clone Contig533 mRNA sequence
          Length = 1081

 Score =  216 bits (109), Expect = 5e-53
 Identities = 252/297 (84%), Gaps = 6/297 (2%)
 Strand = Plus / Plus

                                                                       
Query: 171 cagccccccgcaccgcagccccccaaggaggggatatggtggcagaggaagaagtcccc- 229
           |||||||||  | ||||||||||| ||||||||||||||||||||||||||||| |||| 
Sbjct: 86  cagccccccttatcgcagcccccccaggaggggatatggtggcagaggaagaagcccccc 145

                                                                       
Query: 230 --ctaggaggggtggatatggaggacgaaaggagcagggttctggaagtctcttggtccg 287
             ||   ||| | ||||||||||||||  |  || |||||   ||||| || ||||||||
Sbjct: 146 tcctcccaggaggggatatggaggacgcga--aggagggtaggggaagccttttggtccg 203

                                                                       
Query: 288 caacatcccactaagcgccagagcggaggatctccgtgttccttttgaaaggtttggtcc 347
           |||||||||| |||||| ||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 204 caacatcccattaagcgtcagagcggaggatcttcgagttccttttgaaaggtttggccc 263

                                                                       
Query: 348 tgttagggatgtttaccttccgaaggattattacagcggngagccacgagggtttgcgtt 407
           |||| ||||||||||| |||| ||||| ||||||   || ||||| ||||| ||||| ||
Sbjct: 264 tgttcgggatgtttacattccaaaggactattactctggggagcctcgaggatttgcctt 323

                                                                    
Query: 408 tgtggagtttgttgacccttatgacgcctctgaggccca-tatcacatgaatcgcca 463
           ||| ||||||||||| ||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 324 tgtagagtttgttgatccttacgatgcctctgaagcccagtatcacatgaatcgcca 380



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 148 cccccaaggaggggatatggtggcag 173
           ||||| ||||||||||||||||||||
Sbjct: 105 ccccccaggaggggatatggtggcag 130



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 76  atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 125
           ||||||||||||||||||||  | || || ||||| |||||||| |||||
Sbjct: 75  atgaggaggtacagccccccttatcgcagcccccccaggaggggatatgg 124

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  163 bits (82), Expect = 6e-37
 Identities = 111/120 (92%), Gaps = 3/120 (2%)
 Strand = Plus / Minus

                                                                            
Query: 184      cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
                ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||   |
Sbjct: 23626145 cgcagtccccctaggaggggctatggtggcagaggaagaagtccccctaggagggg---a 23626089

                                                                            
Query: 244      tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 303
                ||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 23626088 tatggaggacggagggagcagggttctggaagtctcttggtccgcaacatcccattaagc 23626029



 Score =  113 bits (57), Expect = 5e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                            
Query: 306      cagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttacct 365
                ||||| ||||||||| || ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 23625888 cagaggggaggatcttcgagttccttttgaaaggtttggtcctgttcgggatgtttacct 23625829

                                     
Query: 366      tccgaaggattattacagcgg 386
                 || |||||||||||||||||
Sbjct: 23625828 gccaaaggattattacagcgg 23625808



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 68/75 (90%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                            
Query: 391      ccacgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggc-ccatat 449
                ||||| || ||||| ||||||||||| |||||||||||||| ||||||||||| | ||||
Sbjct: 23624906 ccacggggatttgcatttgtggagttcgttgacccttatgatgcctctgaggctcaatat 23624847

                               
Query: 450      cacatgaatcgccag 464
                |||||||||||||||
Sbjct: 23624846 cacatgaatcgccag 23624832



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 76       atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 125
                ||||||||||||||||| ||| | || |||||||| |||||||| |||||
Sbjct: 23626169 atgaggaggtacagcccaccatatcgcagtccccctaggaggggctatgg 23626120



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 140      atcgtagtcccccaaggaggggatatggtggcag 173
                |||| |||||||| |||||||| |||||||||||
Sbjct: 23626147 atcgcagtccccctaggaggggctatggtggcag 23626114

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  163 bits (82), Expect = 6e-37
 Identities = 111/120 (92%), Gaps = 3/120 (2%)
 Strand = Plus / Minus

                                                                            
Query: 184      cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
                ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||   |
Sbjct: 23554336 cgcagtccccctaggaggggctatggtggcagaggaagaagtccccctaggagggg---a 23554280

                                                                            
Query: 244      tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 303
                ||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 23554279 tatggaggacggagggagcagggttctggaagtctcttggtccgcaacatcccattaagc 23554220



 Score =  113 bits (57), Expect = 5e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                            
Query: 306      cagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttacct 365
                ||||| ||||||||| || ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 23554079 cagaggggaggatcttcgagttccttttgaaaggtttggtcctgttcgggatgtttacct 23554020

                                     
Query: 366      tccgaaggattattacagcgg 386
                 || |||||||||||||||||
Sbjct: 23554019 gccaaaggattattacagcgg 23553999



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 68/75 (90%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                            
Query: 391      ccacgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggc-ccatat 449
                ||||| || ||||| ||||||||||| |||||||||||||| ||||||||||| | ||||
Sbjct: 23553097 ccacggggatttgcatttgtggagttcgttgacccttatgatgcctctgaggctcaatat 23553038

                               
Query: 450      cacatgaatcgccag 464
                |||||||||||||||
Sbjct: 23553037 cacatgaatcgccag 23553023



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 76       atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 125
                ||||||||||||||||| ||| | || |||||||| |||||||| |||||
Sbjct: 23554360 atgaggaggtacagcccaccatatcgcagtccccctaggaggggctatgg 23554311



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 140      atcgtagtcccccaaggaggggatatggtggcag 173
                |||| |||||||| |||||||| |||||||||||
Sbjct: 23554338 atcgcagtccccctaggaggggctatggtggcag 23554305

---

>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157690

 Score =  163 bits (82), Expect = 6e-37
 Identities = 111/120 (92%), Gaps = 3/120 (2%)
 Strand = Plus / Plus

                                                                         
Query: 184   cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
             ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||   |
Sbjct: 80265 cgcagtccccctaggaggggctatggtggcagaggaagaagtccccctaggagggg---a 80321

                                                                         
Query: 244   tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 303
             ||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 80322 tatggaggacggagggagcagggttctggaagtctcttggtccgcaacatcccattaagc 80381



 Score =  113 bits (57), Expect = 5e-22
 Identities = 75/81 (92%)
 Strand = Plus / Plus

                                                                         
Query: 306   cagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttacct 365
             ||||| ||||||||| || ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 80522 cagaggggaggatcttcgagttccttttgaaaggtttggtcctgttcgggatgtttacct 80581

                                  
Query: 366   tccgaaggattattacagcgg 386
              || |||||||||||||||||
Sbjct: 80582 gccaaaggattattacagcgg 80602



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 68/75 (90%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                         
Query: 391   ccacgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggc-ccatat 449
             ||||| || ||||| ||||||||||| |||||||||||||| ||||||||||| | ||||
Sbjct: 81504 ccacggggatttgcatttgtggagttcgttgacccttatgatgcctctgaggctcaatat 81563

                            
Query: 450   cacatgaatcgccag 464
             |||||||||||||||
Sbjct: 81564 cacatgaatcgccag 81578



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 76    atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 125
             ||||||||||||||||| ||| | || |||||||| |||||||| |||||
Sbjct: 80241 atgaggaggtacagcccaccatatcgcagtccccctaggaggggctatgg 80290



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 140   atcgtagtcccccaaggaggggatatggtggcag 173
             |||| |||||||| |||||||| |||||||||||
Sbjct: 80263 atcgcagtccccctaggaggggctatggtggcag 80296

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  149 bits (75), Expect = 9e-33
 Identities = 104/113 (92%), Gaps = 3/113 (2%)
 Strand = Plus / Minus

                                                                           
Query: 184     cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
               ||||| || |||||||||||||||||||||||||||||||||||||||||||||   |||
Sbjct: 8556258 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagg---gga 8556202

                                                                    
Query: 244     tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatccc 296
               ||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||
Sbjct: 8556201 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccc 8556149



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                           
Query: 306     cagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttacct 365
               |||||||||||||||  | |||||||||||||||||||| |||||| | |||||||||||
Sbjct: 8555779 cagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttacct 8555720

                              
Query: 366     tccgaaggattatta 380
                || |||||||||||
Sbjct: 8555719 gccaaaggattatta 8555705



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 62/68 (91%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                           
Query: 394     cgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggccc-atatcac 452
               ||||||||||| || ||||||||||||||||||||||| || |||||||||| |||||| 
Sbjct: 8554720 cgagggtttgcattcgtggagtttgttgacccttatgatgcttctgaggcccaatatcat 8554661

                       
Query: 453     atgaatcg 460
               ||||||||
Sbjct: 8554660 atgaatcg 8554653



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 140     atcgtagtcccccaaggaggggatatggtggcag 173
               |||| ||||| |||||||||||||||||||||||
Sbjct: 8556260 atcgcagtccaccaaggaggggatatggtggcag 8556227

---

>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0009N02
          Length = 121142

 Score =  149 bits (75), Expect = 9e-33
 Identities = 104/113 (92%), Gaps = 3/113 (2%)
 Strand = Plus / Minus

                                                                         
Query: 184   cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
             ||||| || |||||||||||||||||||||||||||||||||||||||||||||   |||
Sbjct: 25581 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagg---gga 25525

                                                                  
Query: 244   tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatccc 296
             ||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||
Sbjct: 25524 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccc 25472



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 306   cagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttacct 365
             |||||||||||||||  | |||||||||||||||||||| |||||| | |||||||||||
Sbjct: 25102 cagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttacct 25043

                            
Query: 366   tccgaaggattatta 380
              || |||||||||||
Sbjct: 25042 gccaaaggattatta 25028



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 62/68 (91%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                         
Query: 394   cgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggccc-atatcac 452
             ||||||||||| || ||||||||||||||||||||||| || |||||||||| |||||| 
Sbjct: 24043 cgagggtttgcattcgtggagtttgttgacccttatgatgcttctgaggcccaatatcat 23984

                     
Query: 453   atgaatcg 460
             ||||||||
Sbjct: 23983 atgaatcg 23976



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 140   atcgtagtcccccaaggaggggatatggtggcag 173
             |||| ||||| |||||||||||||||||||||||
Sbjct: 25583 atcgcagtccaccaaggaggggatatggtggcag 25550

---

>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1113_G05
          Length = 131445

 Score =  149 bits (75), Expect = 9e-33
 Identities = 104/113 (92%), Gaps = 3/113 (2%)
 Strand = Plus / Minus

                                                                          
Query: 184    cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 243
              ||||| || |||||||||||||||||||||||||||||||||||||||||||||   |||
Sbjct: 105528 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagg---gga 105472

                                                                   
Query: 244    tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatccc 296
              ||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||
Sbjct: 105471 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccc 105419



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                          
Query: 306    cagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttacct 365
              |||||||||||||||  | |||||||||||||||||||| |||||| | |||||||||||
Sbjct: 105049 cagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttacct 104990

                             
Query: 366    tccgaaggattatta 380
               || |||||||||||
Sbjct: 104989 gccaaaggattatta 104975



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 62/68 (91%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                          
Query: 394    cgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggccc-atatcac 452
              ||||||||||| || ||||||||||||||||||||||| || |||||||||| |||||| 
Sbjct: 103990 cgagggtttgcattcgtggagtttgttgacccttatgatgcttctgaggcccaatatcat 103931

                      
Query: 453    atgaatcg 460
              ||||||||
Sbjct: 103930 atgaatcg 103923



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 140    atcgtagtcccccaaggaggggatatggtggcag 173
              |||| ||||| |||||||||||||||||||||||
Sbjct: 105530 atcgcagtccaccaaggaggggatatggtggcag 105497

---

>gb|AY109715.1| Zea mays CL333_1 mRNA sequence
          Length = 1192

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 126/153 (82%), Gaps = 1/153 (0%)
 Strand = Plus / Plus

                                                                       
Query: 313 gaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttaccttccgaag 372
           ||||| || ||||| ||||| ||| |||| || |||||| ||||||||||||| || |  
Sbjct: 230 gaggaactacgtgtccctttcgaacggttcggccctgttcgggatgtttacctgccaaga 289

                                                                       
Query: 373 gattattacagcggngagccacgagggtttgcgtttgtggagtttgttgacccttatgac 432
           |||||| |||  || |||||| |||| |||| ||| |||||||| |||||  ||||||||
Sbjct: 290 gattatcacactggggagccaagaggatttgggttcgtggagttcgttgatgcttatgac 349

                                            
Query: 433 gcctctgaggccca-tatcacatgaatcgccag 464
           || |||||||| || || |||||||||||||||
Sbjct: 350 gcttctgaggcacagtaccacatgaatcgccag 382

---

>dbj|AK102518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095N01, full
           insert sequence
          Length = 1767

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 77/94 (81%)
 Strand = Plus / Plus

                                                                       
Query: 325 gttccttttgaaaggtttggtcctgttagggatgtttaccttccgaaggattattacagc 384
           ||||| ||| ||| ||||||||||||| |||||||||| || || || || ||  |||  
Sbjct: 257 gttccatttcaaaagtttggtcctgttcgggatgtttatctgccaaaagactacaacact 316

                                             
Query: 385 ggngagccacgagggtttgcgtttgtggagtttg 418
           || |||||| |||| ||||| |||||||||||||
Sbjct: 317 ggggagccaagaggatttgcatttgtggagtttg 350

---

>ref|NM_115404.1| Arabidopsis thaliana SCL30; RNA binding / nucleic acid binding
           AT3G55460 (SCL30) mRNA, complete cds
          Length = 1101

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 397 gggtttgcgtttgtggagtttgttga 422
           ||||||||||||||||||||||||||
Sbjct: 347 gggtttgcgtttgtggagtttgttga 372

---

>emb|AJ293798.1|ATH293798 Arabidopsis thaliana mRNA for SC35-like splicing factor SCL30, 30
           kD
          Length = 1044

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 397 gggtttgcgtttgtggagtttgttga 422
           ||||||||||||||||||||||||||
Sbjct: 294 gggtttgcgtttgtggagtttgttga 319

---

>gb|AY128836.1| Arabidopsis thaliana putative RNA binding protein (At3g55460) mRNA,
           complete cds
          Length = 848

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 397 gggtttgcgtttgtggagtttgttga 422
           ||||||||||||||||||||||||||
Sbjct: 265 gggtttgcgtttgtggagtttgttga 290

---

>gb|AY099649.1| Arabidopsis thaliana putative RNA binding protein (At3g55460) mRNA,
           complete cds
          Length = 1038

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 397 gggtttgcgtttgtggagtttgttga 422
           ||||||||||||||||||||||||||
Sbjct: 316 gggtttgcgtttgtggagtttgttga 341

---

>emb|BX824297.1|CNS0A5MO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH37ZE11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 997

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 397 gggtttgcgtttgtggagtttgttga 422
           ||||||||||||||||||||||||||
Sbjct: 303 gggtttgcgtttgtggagtttgttga 328

---

>emb|BX823425.1|CNS0A5EO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS38ZB07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1533

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 397 gggtttgcgtttgtggagtttgttga 422
           ||||||||||||||||||||||||||
Sbjct: 753 gggtttgcgtttgtggagtttgttga 778

---

>gb|AY086131.1| Arabidopsis thaliana clone 21694 mRNA, complete sequence
          Length = 1100

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 397 gggtttgcgtttgtggagtttgttga 422
           ||||||||||||||||||||||||||
Sbjct: 347 gggtttgcgtttgtggagtttgttga 372

---

>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16
          Length = 103240

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 397   gggtttgcgtttgtggagtttgttga 422
             ||||||||||||||||||||||||||
Sbjct: 44962 gggtttgcgtttgtggagtttgttga 44987

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0003C04 map S10003, complete sequence
          Length = 119238

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 325   gttccttttgaaaggtttggtcctgttagggatgttta 362
             ||||| ||| ||| ||||||||||||| ||||||||||
Sbjct: 26389 gttccatttcaaaagtttggtcctgttcgggatgttta 26352

---

>ref|XM_445151.1| Candida glabrata CBS138, CAGL0B04169g partial mRNA
          Length = 2586

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 395  gagggtttgcgtttgtggagtttgtt 420
            |||| |||||||||||||||||||||
Sbjct: 2333 gaggttttgcgtttgtggagtttgtt 2358

---

>emb|CR380948.1| Candida glabrata strain CBS138 chromosome B complete sequence
          Length = 502101

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 395    gagggtttgcgtttgtggagtttgtt 420
              |||| |||||||||||||||||||||
Sbjct: 404966 gaggttttgcgtttgtggagtttgtt 404941

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 325      gttccttttgaaaggtttggtcctgttagggatgttta 362
                ||||| ||| ||| ||||||||||||| ||||||||||
Sbjct: 28221288 gttccatttcaaaagtttggtcctgttcgggatgttta 28221251

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 325      gttccttttgaaaggtttggtcctgttagggatgttta 362
                ||||| ||| ||| ||||||||||||| ||||||||||
Sbjct: 28206166 gttccatttcaaaagtttggtcctgttcgggatgttta 28206129

---

>gb|AC095015.1| Drosophila melanogaster, chromosome 3R, region 84A-84B, BAC clone
              BACR32J03, complete sequence
          Length = 190642

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 168    tggcagccccccgcaccgcagcccc 192
              |||||||||||||| ||||||||||
Sbjct: 130928 tggcagccccccgccccgcagcccc 130904

---

>gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT-C),complete sequence
          Length = 429825

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 168   tggcagccccccgcaccgcagcccc 192
             |||||||||||||| ||||||||||
Sbjct: 92866 tggcagccccccgccccgcagcccc 92890

---

>gb|AE003673.3| Drosophila melanogaster chromosome 3R, section 11 of 118 of the complete
              sequence
          Length = 308146

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 168    tggcagccccccgcaccgcagcccc 192
              |||||||||||||| ||||||||||
Sbjct: 185788 tggcagccccccgccccgcagcccc 185764

---

>gb|AC002513.1|AC002513 Drosophila melanogaster (P1 DS08322 (D15)) DNA sequence, complete
             sequence
          Length = 79150

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 168   tggcagccccccgcaccgcagcccc 192
             |||||||||||||| ||||||||||
Sbjct: 22897 tggcagccccccgccccgcagcccc 22921

---

>gb|AY426813.1| Parryella filifolia internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 675

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ccgcaccgcagccccccaag 197
           ||||||||||||||||||||
Sbjct: 88  ccgcaccgcagccccccaag 107

---

>gb|AY426803.1| Errazurizia rotundata internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 555

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ccgcaccgcagccccccaag 197
           ||||||||||||||||||||
Sbjct: 37  ccgcaccgcagccccccaag 56

---

>gb|AY426775.1| Amorpha georgiana internal transcribed spacer 1, partial sequence;
           5.8S ribosomal RNA gene, complete sequence; and internal
           transcribed spacer 2, partial sequence
          Length = 644

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ccgcaccgcagccccccaag 197
           ||||||||||||||||||||
Sbjct: 74  ccgcaccgcagccccccaag 93

---

>gb|AY426774.1| Amorpha fruticosa internal transcribed spacer 1, partial sequence;
           5.8S ribosomal RNA gene, complete sequence; and internal
           transcribed spacer 2, partial sequence
          Length = 679

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ccgcaccgcagccccccaag 197
           ||||||||||||||||||||
Sbjct: 82  ccgcaccgcagccccccaag 101

---

>gb|AY426773.1| Amorpha canescens internal transcribed spacer 1, partial sequence;
           5.8S ribosomal RNA gene, complete sequence; and internal
           transcribed spacer 2, partial sequence
          Length = 644

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ccgcaccgcagccccccaag 197
           ||||||||||||||||||||
Sbjct: 75  ccgcaccgcagccccccaag 94

---

>gb|AY426771.1| Amorpha apiculata internal transcribed spacer 1, partial sequence;
           5.8S ribosomal RNA gene, complete sequence; and internal
           transcribed spacer 2, partial sequence
          Length = 676

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ccgcaccgcagccccccaag 197
           ||||||||||||||||||||
Sbjct: 85  ccgcaccgcagccccccaag 104

---

>gb|DQ178997.1| Streptomyces clavuligerus glyceraldehyde-3-phosphate dehydrogenase 2
            (gap2) gene, complete cds
          Length = 1810

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 39   ctccccgggcgctccccgga 58
            ||||||||||||||||||||
Sbjct: 1809 ctccccgggcgctccccgga 1790

---

>gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete sequence
          Length = 123565

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 340    tttggtcctgttagggatgtttac 363
              |||||||||||||| |||||||||
Sbjct: 108876 tttggtcctgttagtgatgtttac 108899

---

>gb|AY186756.1| Arabidopsis lyrata S-related kinase 9 gene, exon 1 and partial cds
          Length = 901

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 364 cttccgaaggattattacag 383
           ||||||||||||||||||||
Sbjct: 465 cttccgaaggattattacag 484

---

>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 324     tgttccttttgaaaggtttg 343
               ||||||||||||||||||||
Sbjct: 1582184 tgttccttttgaaaggtttg 1582165



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 324     tgttccttttgaaaggtttg 343
               ||||||||||||||||||||
Sbjct: 1412175 tgttccttttgaaaggtttg 1412156

---

>gb|AF156658.1|AF156658 Ambystoma mexicanum MHC class I heavy chain (Mhc) mRNA, Mhc-Amme
           2-01 allele, partial cds
          Length = 408

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 cggaggatctccgtgttcct 330
           ||||||||||||||||||||
Sbjct: 38  cggaggatctccgtgttcct 19

---

>gb|AF156657.1|AF156657 Ambystoma mexicanum MHC class I heavy chain (Mhc) mRNA, Mhc-Amme
           2-08 allele, partial cds
          Length = 408

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 cggaggatctccgtgttcct 330
           ||||||||||||||||||||
Sbjct: 38  cggaggatctccgtgttcct 19

---

>gb|AF156656.1|AF156656 Ambystoma mexicanum MHC class I heavy chain (Mhc) mRNA, Mhc-Amme
           2-13 allele, partial cds
          Length = 408

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 cggaggatctccgtgttcct 330
           ||||||||||||||||||||
Sbjct: 38  cggaggatctccgtgttcct 19

---

>gb|AF369529.1|AF369529 Bartonella henselae strain San Ant 2 16S ribosomal RNA, partial
            sequence; 16S-23S intergenic spacer, complete sequence;
            and 23S ribosomal RNA, partial sequence
          Length = 1382

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgttccttttgaaaggtttg 343
            ||||||||||||||||||||
Sbjct: 1069 tgttccttttgaaaggtttg 1088

---

>gb|AF369528.1|AF369528 Bartonella henselae strain 90-615 16S ribosomal RNA, partial
            sequence; 16S-23S intergenic spacer, complete sequence;
            and 23S ribosomal RNA, partial sequence
          Length = 1352

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgttccttttgaaaggtttg 343
            ||||||||||||||||||||
Sbjct: 1040 tgttccttttgaaaggtttg 1059

---

>gb|AF369527.1|AF369527 Bartonella henselae strain CAL-1 16S ribosomal RNA, partial sequence;
            16S-23S intergenic spacer, complete sequence; and 23S
            ribosomal RNA, partial sequence
          Length = 1345

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgttccttttgaaaggtttg 343
            ||||||||||||||||||||
Sbjct: 1047 tgttccttttgaaaggtttg 1066

---

>gb|AF312496.1|AF312496 Bartonella henselae isolate URBHLIE 9 16S ribosomal RNA gene, partial
            sequence; 16S-23S intergenic spacer, complete sequence;
            and 23S ribosomal RNA, partial sequence
          Length = 1352

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgttccttttgaaaggtttg 343
            ||||||||||||||||||||
Sbjct: 1044 tgttccttttgaaaggtttg 1063

---

>gb|AF312495.1|AF312495 Bartonella henselae isolate URBHLLY 8 16S ribosomal RNA gene, partial
            sequence; 16S-23S intergenic spacer, complete sequence;
            and 23S ribosomal RNA, partial sequence
          Length = 1365

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgttccttttgaaaggtttg 343
            ||||||||||||||||||||
Sbjct: 1047 tgttccttttgaaaggtttg 1066

---

>gb|U59890.1|AFU59890 Amorpha fruticosa 5.8S ribosomal RNA gene and internal transcribed
           spacers 1 and 2, complete sequence
          Length = 639

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ccgcaccgcagccccccaag 197
           ||||||||||||||||||||
Sbjct: 72  ccgcaccgcagccccccaag 91

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     gcagaggaagaagtccccct 231
               ||||||||||||||||||||
Sbjct: 2844918 gcagaggaagaagtccccct 2844899

---

>gb|AC016689.4| Homo sapiens BAC clone RP11-81H20 from 2, complete sequence
          Length = 134841

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    ggcagaggaagaagtccccc 230
              ||||||||||||||||||||
Sbjct: 130323 ggcagaggaagaagtccccc 130342

---

>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0085L11
          Length = 148142

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   gcagaggaagaagtccccct 231
             ||||||||||||||||||||
Sbjct: 88399 gcagaggaagaagtccccct 88380

---

>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0046E09
          Length = 146776

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 212  gcagaggaagaagtccccct 231
            ||||||||||||||||||||
Sbjct: 5064 gcagaggaagaagtccccct 5045

---

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      gcacccccgcggcggcggac 38
               ||||||||||||||||||||
Sbjct: 1739955 gcacccccgcggcggcggac 1739936

---

>emb|AJ457178.1|BHE457178 Bartonella henselae tRNA-Ile gene, IGS and tRNA-Ala gene, isolate
           BH2
          Length = 1146

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 tgttccttttgaaaggtttg 343
           ||||||||||||||||||||
Sbjct: 956 tgttccttttgaaaggtttg 975

---

>emb|AJ457177.1|BHE457177 Bartonella henselae tRNA-Ile gene, IGS and tRNA-Ala gene, isolate
           JR2
          Length = 1161

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 tgttccttttgaaaggtttg 343
           ||||||||||||||||||||
Sbjct: 971 tgttccttttgaaaggtttg 990

---

>emb|AJ439688.1|BHE439688 Bartonella henselae partial 16S rRNA gene, 16S-23S IGS, partial 23S
            rRNA gene, tRNA-Ile gene, and tRNA-Ala gene, isolate HC69
          Length = 1324

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgttccttttgaaaggtttg 343
            ||||||||||||||||||||
Sbjct: 1011 tgttccttttgaaaggtttg 1030

---

>emb|AJ439687.1|BHE439687 Bartonella henselae partial 16S rRNA gene, 16S-23S IGS, partial 23S
            rRNA gene, tRNA-Ile gene, and tRNA-Ala gene, isolate HC54
          Length = 1324

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgttccttttgaaaggtttg 343
            ||||||||||||||||||||
Sbjct: 1011 tgttccttttgaaaggtttg 1030

---

>emb|AJ441257.1|BHE441257 Bartonella henselae tRNA-Ile gene for transfer RNA-Ile, ITS1 and
           tRNA-Ala gene for transfer RNA-Ala, isolate RMC3
          Length = 871

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 tgttccttttgaaaggtttg 343
           ||||||||||||||||||||
Sbjct: 629 tgttccttttgaaaggtttg 648

---

>emb|AJ441256.1|BHE441256 Bartonella henselae tRNA-Ile gene for transfer RNA-Ile, IGS and
           tRNA-Ala gene for transfer RNA-Ala, isolate RMC10
          Length = 886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 tgttccttttgaaaggtttg 343
           ||||||||||||||||||||
Sbjct: 644 tgttccttttgaaaggtttg 663

---

>gb|AY108472.1| Zea mays PCO119082 mRNA sequence
          Length = 2122

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  atggaggacgaaaggagcag 264
            ||||||||||||||||||||
Sbjct: 2008 atggaggacgaaaggagcag 1989

---

>gb|U83138.1|AMU83138 Ambystoma mexicanum MHC class IA alpha chain mRNA, partial cds
          Length = 2162

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 cggaggatctccgtgttcct 330
           ||||||||||||||||||||
Sbjct: 215 cggaggatctccgtgttcct 196

---

>gb|L35101.1|BAO16SRB Baronella henselae 16S-23S intergenic spacer region, transfer RNA-Ile
            and transfer RNA-Ala gene, complete
          Length = 1351

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgttccttttgaaaggtttg 343
            ||||||||||||||||||||
Sbjct: 1038 tgttccttttgaaaggtttg 1057

---

>gb|AC140244.3| Mus musculus BAC clone RP24-285J23 from 14, complete sequence
          Length = 171011

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   ccccccgcaccgcagccccc 193
             ||||||||||||||||||||
Sbjct: 51544 ccccccgcaccgcagccccc 51525

---

>gb|AC124846.2| Homo sapiens chromosome 5 clone CTC-339C6, complete sequence
          Length = 108340

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   ttccttttgaaaggtttggt 345
             ||||||||||||||||||||
Sbjct: 33429 ttccttttgaaaggtttggt 33410


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,066,706
Number of Sequences: 3902068
Number of extensions: 3066706
Number of successful extensions: 54358
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54018
Number of HSP's gapped (non-prelim): 302
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---