Clone Information

BLAST Search Result

Clone Name	bast40f09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RSSA_SOYBN (O22518) 40S ribosomal protein SA (p40)	218	4e-57
2	RSSAB_ARATH (Q8H173) 40S ribosomal protein SA-2 (p40 protein hom...	208	6e-54
3	RSSAA_ARATH (Q08682) 40S ribosomal protein SA-1 (p40) (Laminin r...	207	7e-54
4	RSSA_CICAR (O65751) 40S ribosomal protein SA (p40)	206	2e-53
5	RSSA_BRANA (Q9ZSR8) 40S ribosomal protein SA (p40) (Laminin rece...	205	4e-53
6	RSSA_DAUCA (O80377) 40S ribosomal protein SA (p40)	205	5e-53
7	RSSA_TRIGR (P38980) 40S ribosomal protein SA (p40) (34/67 kDa la...	158	7e-39
8	RSSA_DROME (P38979) 40S ribosomal protein SA (p40) (Stubarista p...	155	3e-38
9	RSSA_URECA (P38981) 40S ribosomal protein SA (p40) (34/67 kDa la...	155	4e-38
10	RS0B_SCHPO (Q9P546) 40S ribosomal protein S0-B	154	1e-37
11	RSSA_MOUSE (P14206) 40S ribosomal protein SA (p40) (34/67 kDa la...	153	2e-37
12	RSSA_RAT (P38983) 40S ribosomal protein SA (p40) (34/67 kDa lami...	152	3e-37
13	RSSA_HUMAN (P08865) 40S ribosomal protein SA (p40) (34/67 kDa la...	152	3e-37
14	RSSA_CRIGR (P38982) 40S ribosomal protein SA (p40) (34/67 kDa la...	152	3e-37
15	RSSA_CHICK (P50890) 40S ribosomal protein SA (p40) (34/67 kDa la...	152	3e-37
16	RSSA_BOVIN (P26452) 40S ribosomal protein SA (p40) (C10 protein)	150	1e-36
17	RS0A_SCHPO (Q9Y7L8) 40S ribosomal protein S0-A	148	5e-36
18	RSSA_CHLVR (P38984) 40S ribosomal protein SA (p40) (33 kDa lamin...	147	2e-35
19	RS0_NEUCR (Q01291) 40S ribosomal protein S0 (Ribosome-associated...	144	8e-35
20	RSSA_CAEEL (P46769) Probable 40S ribosomal protein SA (p40)	144	1e-34
21	RS0_PNECA (Q01661) 40S ribosomal protein S0 (Extracellular matri...	139	2e-33
22	RS0B_YEAST (P46654) 40S ribosomal protein S0-B (Nucleic acid-bin...	139	2e-33
23	RS0A_YEAST (P32905) 40S ribosomal protein S0-A (Nucleic acid-bin...	138	7e-33
24	RS0_CANAL (O42817) 40S ribosomal protein S0	135	4e-32
25	RSSA_ECHGR (P46770) 40S ribosomal protein SA (p40) (Laminin-bind...	133	2e-31
26	RS2_SULSO (P95993) 30S ribosomal protein S2P	93	3e-19
27	RS2_PYRHO (O59295) 30S ribosomal protein S2P	89	4e-18
28	RS2_PYRFU (Q8U0F0) 30S ribosomal protein S2P	89	4e-18
29	RS2_PYRKO (Q5JJD2) 30S ribosomal protein S2P	89	7e-18
30	RS2_PYRAB (Q9V191) 30S ribosomal protein S2P	88	9e-18
31	RS2_METTH (O26150) 30S ribosomal protein S2P	87	2e-17
32	RS2_METKA (Q8TV23) 30S ribosomal protein S2P	87	2e-17
33	RS2_METJA (P54109) 30S ribosomal protein S2P	85	7e-17
34	RS2_THEAC (P57712) 30S ribosomal protein S2P	81	1e-15
35	RS2_THEVO (Q97BQ4) 30S ribosomal protein S2P	77	2e-14
36	RS2_HALSA (P57713) 30S ribosomal protein S2P	77	3e-14
37	RS2_SULTO (Q96YW5) 30S ribosomal protein S2P	76	3e-14
38	RS2_ARCFU (O29132) 30S ribosomal protein S2P	75	6e-14
39	RS2_SULAC (P39478) 30S ribosomal protein S2P	75	6e-14
40	RS2_METMA (Q8PW41) 30S ribosomal protein S2P	75	8e-14
41	RS2_METAC (Q8TT39) 30S ribosomal protein S2P	74	1e-13
42	RS2_HALMA (P29202) 30S ribosomal protein S2P (HS2) (ORFMSG)	74	2e-13
43	RSSA_STRPU (P46771) 40S ribosomal protein SA (p40) (34/67 kDa la...	71	1e-12
44	RS2_PICTO (Q6L1Q0) 30S ribosomal protein S2P	68	9e-12
45	RS2_PYRAE (Q8ZYE2) 30S ribosomal protein S2P	62	7e-10
46	RS2_AERPE (Q9YB45) 30S ribosomal protein S2P	62	7e-10
47	RT04_YEAST (P32902) Mitochondrial 40S ribosomal protein MRP4	44	2e-04
48	RS2_THETN (Q8RA21) 30S ribosomal protein S2	38	0.010
49	RS2_CHLPN (Q9Z7K9) 30S ribosomal protein S2	36	0.050
50	RS2_CHLCV (Q824U3) 30S ribosomal protein S2	35	0.11
51	CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel ...	33	0.43
52	TMC2_HUMAN (Q8TDI7) Transmembrane cochlear-expressed protein 2	32	0.56
53	RS2_ONYPE (Q6YR51) 30S ribosomal protein S2	32	0.73
54	ZNF74_HUMAN (Q16587) Zinc finger protein 74 (hZNF7)	26	1.7
55	RT02_ARATH (Q9GCB9) Mitochondrial ribosomal protein S2	30	3.6
56	FOXC2_HUMAN (Q99958) Forkhead box protein C2 (Forkhead-related p...	30	3.6
57	RECU_LISIN (Q92AB7) Recombination protein U homolog	29	4.7
58	NIFD_METBA (P55170) Nitrogenase molybdenum-iron protein alpha ch...	29	4.7
59	NORM_PSEAE (Q9HTR0) Probable multidrug resistance protein norM (...	29	4.7
60	LEU21_METJA (Q58409) 3-isopropylmalate dehydratase large subunit...	29	4.7
61	RECU_LISMO (Q8Y611) Recombination protein U homolog	29	6.2
62	RECU_LISMF (Q71YC4) Recombination protein U homolog	29	6.2
63	JPH3_HUMAN (Q8WXH2) Junctophilin-3 (Junctophilin type 3) (JP-3)	29	6.2
64	OTX1_HUMAN (P32242) Homeobox protein OTX1	29	6.2
65	YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'regio...	29	6.2
66	OTX1_RAT (Q63410) Homeobox protein OTX1	29	6.2
67	OTX1_MOUSE (P80205) Homeobox protein OTX1	29	6.2
68	YR229_MIMIV (Q5UQC4) Putative ankyrin repeat protein R229	28	8.1
69	RS1_HELPJ (Q9ZKF6) 30S ribosomal protein S1	28	8.1
70	NOP3_YEAST (Q01560) Nucleolar protein 3 (Mitochondrial targeting...	28	8.1
71	RS1_HELPY (P56008) 30S ribosomal protein S1	28	8.1
72	IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2	28	8.1

>RSSA_SOYBN (O22518) 40S ribosomal protein SA (p40)|
          Length = 310

 Score =  218 bits (556), Expect = 4e-57
 Identities = 106/115 (92%), Positives = 112/115 (97%)
 Frame = +2

Query: 104 PRALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARV 283
           PR LSQKE D+QMMLAADVHLGTKNCDFQMERY +KRR+DGIYIINLGKTWEKLQLAARV
Sbjct: 12  PRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARV 71

Query: 284 IVAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IVAIENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSFSEP
Sbjct: 72  IVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

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>RSSAB_ARATH (Q8H173) 40S ribosomal protein SA-2 (p40 protein homolog)|
          Length = 280

 Score =  208 bits (529), Expect = 6e-54
 Identities = 99/116 (85%), Positives = 110/116 (94%)
 Frame = +2

Query: 101 APRALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAAR 280
           A R +S+KE D+QMML+ADVHLGTKNC++QMERY +KRR DGIYIINLGKTW+KLQ+AAR
Sbjct: 9   AGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAAR 68

Query: 281 VIVAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           VIVAIENP+DIIVQSARPYGQRAVLKFAQ+TG NAIAGRHTPGTFTNQMQTSFSEP
Sbjct: 69  VIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEP 124

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>RSSAA_ARATH (Q08682) 40S ribosomal protein SA-1 (p40) (Laminin receptor|
           homolog)
          Length = 298

 Score =  207 bits (528), Expect = 7e-54
 Identities = 100/112 (89%), Positives = 108/112 (96%)
 Frame = +2

Query: 113 LSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVA 292
           LSQKE DV+MM AA+VHLGTKNC++QMERY +KRR+DGIYI NLGKTWEKLQ+AARVIVA
Sbjct: 12  LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71

Query: 293 IENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IENPQDIIVQSARPYGQRAVLKFAQ+TGANAIAGRHTPGTFTNQMQTSFSEP
Sbjct: 72  IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEP 123

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>RSSA_CICAR (O65751) 40S ribosomal protein SA (p40)|
          Length = 300

 Score =  206 bits (524), Expect = 2e-53
 Identities = 99/114 (86%), Positives = 109/114 (95%)
 Frame = +2

Query: 107 RALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVI 286
           R L+QKE D+QMMLAADVHLGTKNC+FQMERY +KRR+DGIYIINLGKTW+KL LAAR+I
Sbjct: 9   RQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDKLNLAARII 68

Query: 287 VAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           VAIEN QDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSFSEP
Sbjct: 69  VAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 122

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>RSSA_BRANA (Q9ZSR8) 40S ribosomal protein SA (p40) (Laminin receptor-like|
           protein)
          Length = 292

 Score =  205 bits (522), Expect = 4e-53
 Identities = 98/112 (87%), Positives = 107/112 (95%)
 Frame = +2

Query: 113 LSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVA 292
           LSQKE D++MM AA+VHLGTKNC++QMERY +KRR+DGIYI NLGKTWEKL +AARVIVA
Sbjct: 9   LSQKEADIKMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVIVA 68

Query: 293 IENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IENPQDIIVQSARPYGQRAVLKFAQ+TGANAIAGRHTPGTFTNQMQTSFSEP
Sbjct: 69  IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEP 120

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>RSSA_DAUCA (O80377) 40S ribosomal protein SA (p40)|
          Length = 297

 Score =  205 bits (521), Expect = 5e-53
 Identities = 99/114 (86%), Positives = 107/114 (93%)
 Frame = +2

Query: 107 RALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVI 286
           R LS  E D+QMM AA+VHLGTKNCDFQMERY +KRR+DGIYIINLGKTWEKL LAARVI
Sbjct: 6   RELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLAARVI 65

Query: 287 VAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           V+IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSFSEP
Sbjct: 66  VSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 119

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>RSSA_TRIGR (P38980) 40S ribosomal protein SA (p40) (34/67 kDa laminin-binding|
           protein)
          Length = 316

 Score =  158 bits (399), Expect = 7e-39
 Identities = 74/112 (66%), Positives = 89/112 (79%)
 Frame = +2

Query: 113 LSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVA 292
           L+ KE DVQ  LA+  H+G+ N D+QM +Y YKR+ DG YIINL +TWEKL +AAR+IVA
Sbjct: 8   LALKEDDVQKFLASGAHIGSSNLDYQMTQYVYKRKPDGTYIINLRRTWEKLLMAARIIVA 67

Query: 293 IENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IENP D+ V S+RPYGQRAVLKF  HTGA  IAGR+TPGTFTNQ+Q +F EP
Sbjct: 68  IENPADVCVISSRPYGQRAVLKFGAHTGATPIAGRYTPGTFTNQIQAAFREP 119

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>RSSA_DROME (P38979) 40S ribosomal protein SA (p40) (Stubarista protein)|
           (Laminin receptor homolog) (K14)
          Length = 270

 Score =  155 bits (393), Expect = 3e-38
 Identities = 75/112 (66%), Positives = 89/112 (79%)
 Frame = +2

Query: 113 LSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVA 292
           LS KE D+  ML A  HLG++N +FQME+Y YKRR+DG+ I+NLGKTWEKLQLAAR IVA
Sbjct: 8   LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVA 67

Query: 293 IENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           I+NP DI V S+RP GQRAVLKFA++T    IAGR TPG FTNQ+Q +F EP
Sbjct: 68  IDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREP 119

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>RSSA_URECA (P38981) 40S ribosomal protein SA (p40) (34/67 kDa laminin-binding|
           protein)
          Length = 317

 Score =  155 bits (392), Expect = 4e-38
 Identities = 78/112 (69%), Positives = 86/112 (76%)
 Frame = +2

Query: 113 LSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVA 292
           L+ KE+DV   LA   HLG  N DFQME+Y YKRR DG  IIN+ KTWEK+ LAAR I A
Sbjct: 8   LALKEEDVTKFLACASHLGANNVDFQMEQYVYKRRPDGTSIINVRKTWEKVLLAARAIAA 67

Query: 293 IENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IENP DI V SARPYGQRAVLKFA +TGA  IAGR TPGTFTNQ+QT+F EP
Sbjct: 68  IENPADICVISARPYGQRAVLKFAHYTGATPIAGRFTPGTFTNQIQTAFREP 119

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>RS0B_SCHPO (Q9P546) 40S ribosomal protein S0-B|
          Length = 287

 Score =  154 bits (388), Expect = 1e-37
 Identities = 73/115 (63%), Positives = 89/115 (77%)
 Frame = +2

Query: 104 PRALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARV 283
           P  L+  + D++ +LAAD H+G+KN + +ME Y +KRRSDGI+IINLGKTWEKL LAARV
Sbjct: 8   PSVLNATDDDIKNLLAADSHIGSKNLEVRMENYVWKRRSDGIHIINLGKTWEKLVLAARV 67

Query: 284 IVAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           I  IENP D+ V S+RPYG RAVLKFA HTGA AIAGR TPG FTN +  ++ EP
Sbjct: 68  IATIENPADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREP 122

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>RSSA_MOUSE (P14206) 40S ribosomal protein SA (p40) (34/67 kDa laminin|
           receptor)
          Length = 294

 Score =  153 bits (387), Expect = 2e-37
 Identities = 78/112 (69%), Positives = 87/112 (77%)
 Frame = +2

Query: 113 LSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVA 292
           L  KE+DV  +LAA  HLG  N DFQME+Y YKR+SDGIYIINL +TWEKL LAAR IVA
Sbjct: 7   LQMKEEDVLKLLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 66

Query: 293 IENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IENP D+ V S+R  GQRAVLKFA  TGA  IAGR TPGTFTNQ+Q +F EP
Sbjct: 67  IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREP 118

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>RSSA_RAT (P38983) 40S ribosomal protein SA (p40) (34/67 kDa laminin|
           receptor)
          Length = 294

 Score =  152 bits (385), Expect = 3e-37
 Identities = 78/112 (69%), Positives = 86/112 (76%)
 Frame = +2

Query: 113 LSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVA 292
           L  KE+DV   LAA  HLG  N DFQME+Y YKR+SDGIYIINL +TWEKL LAAR IVA
Sbjct: 7   LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 66

Query: 293 IENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IENP D+ V S+R  GQRAVLKFA  TGA  IAGR TPGTFTNQ+Q +F EP
Sbjct: 67  IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREP 118

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>RSSA_HUMAN (P08865) 40S ribosomal protein SA (p40) (34/67 kDa laminin|
           receptor) (Colon carcinoma laminin-binding protein)
           (NEM/1CHD4) (Multidrug resistance-associated protein
           MGr1-Ag)
          Length = 294

 Score =  152 bits (385), Expect = 3e-37
 Identities = 78/112 (69%), Positives = 86/112 (76%)
 Frame = +2

Query: 113 LSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVA 292
           L  KE+DV   LAA  HLG  N DFQME+Y YKR+SDGIYIINL +TWEKL LAAR IVA
Sbjct: 7   LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 66

Query: 293 IENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IENP D+ V S+R  GQRAVLKFA  TGA  IAGR TPGTFTNQ+Q +F EP
Sbjct: 67  IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREP 118

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>RSSA_CRIGR (P38982) 40S ribosomal protein SA (p40) (34/67 kDa laminin|
           receptor)
          Length = 294

 Score =  152 bits (385), Expect = 3e-37
 Identities = 78/112 (69%), Positives = 86/112 (76%)
 Frame = +2

Query: 113 LSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVA 292
           L  KE+DV   LAA  HLG  N DFQME+Y YKR+SDGIYIINL +TWEKL LAAR IVA
Sbjct: 7   LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 66

Query: 293 IENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IENP D+ V S+R  GQRAVLKFA  TGA  IAGR TPGTFTNQ+Q +F EP
Sbjct: 67  IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREP 118

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>RSSA_CHICK (P50890) 40S ribosomal protein SA (p40) (34/67 kDa laminin|
           receptor) (37LRP)
          Length = 296

 Score =  152 bits (385), Expect = 3e-37
 Identities = 78/112 (69%), Positives = 86/112 (76%)
 Frame = +2

Query: 113 LSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVA 292
           L  KE+DV   LAA  HLG  N DFQME+Y YKR+SDGIYIINL +TWEKL LAAR IVA
Sbjct: 8   LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67

Query: 293 IENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IENP D+ V S+R  GQRAVLKFA  TGA  IAGR TPGTFTNQ+Q +F EP
Sbjct: 68  IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREP 119

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>RSSA_BOVIN (P26452) 40S ribosomal protein SA (p40) (C10 protein)|
          Length = 294

 Score =  150 bits (380), Expect = 1e-36
 Identities = 77/112 (68%), Positives = 85/112 (75%)
 Frame = +2

Query: 113 LSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVA 292
           L  KE+DV   LAA  HLG  N DFQME+Y YKR+SDGIYIINL +TWEKL LAAR IVA
Sbjct: 7   LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 66

Query: 293 IENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IENP D+ V S+R  GQRAVLKFA  TGA  IAGR TPG FTNQ+Q +F EP
Sbjct: 67  IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGNFTNQIQAAFREP 118

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>RS0A_SCHPO (Q9Y7L8) 40S ribosomal protein S0-A|
          Length = 292

 Score =  148 bits (374), Expect = 5e-36
 Identities = 68/115 (59%), Positives = 88/115 (76%)
 Frame = +2

Query: 104 PRALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARV 283
           P  L+  ++D++ +LAA+ H+G+KN + +M+ Y +KRRSDG++I+NLGKTWEKL LAARV
Sbjct: 7   PNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAARV 66

Query: 284 IVAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           I  IENP D+ V S R YG RAVLKFA HTGA AIAGR TPG FTN +  ++ EP
Sbjct: 67  IATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREP 121

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>RSSA_CHLVR (P38984) 40S ribosomal protein SA (p40) (33 kDa laminin-binding|
           protein)
          Length = 293

 Score =  147 bits (370), Expect = 2e-35
 Identities = 75/113 (66%), Positives = 86/113 (76%)
 Frame = +2

Query: 110 ALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIV 289
           ALS KE+DV   LAA VHLG+ N     + Y +KR+SDGI+IINL KTWEKL LAAR+I 
Sbjct: 7   ALSLKEEDVVKFLAAGVHLGSTNVGSSCQGYVFKRKSDGIHIINLRKTWEKLILAARIIA 66

Query: 290 AIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           +IENP D+ V S+RPYG RAVLKFAQ TGA  IAGR TPGTFTNQ+Q  F EP
Sbjct: 67  SIENPADVCVISSRPYGTRAVLKFAQSTGAIPIAGRFTPGTFTNQIQKRFREP 119

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>RS0_NEUCR (Q01291) 40S ribosomal protein S0 (Ribosome-associated protein 1)|
          Length = 290

 Score =  144 bits (364), Expect = 8e-35
 Identities = 68/115 (59%), Positives = 85/115 (73%)
 Frame = +2

Query: 104 PRALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARV 283
           P   +    D++ +LAA  H+G+KN    M+ Y +K R+DG+ I+N+GKTWEK+ LAAR+
Sbjct: 7   PSIFNATSTDIEQLLAAQCHIGSKNLGVHMQPYLWKTRADGVNILNVGKTWEKIVLAARI 66

Query: 284 IVAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           I AI+NP DI V SARPYGQRAVLKFA HTGA AIAGR TPG+FTN +  SF EP
Sbjct: 67  IAAIDNPADICVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEP 121

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>RSSA_CAEEL (P46769) Probable 40S ribosomal protein SA (p40)|
          Length = 275

 Score =  144 bits (362), Expect = 1e-34
 Identities = 72/118 (61%), Positives = 87/118 (73%)
 Frame = +2

Query: 95  GEAPRALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLA 274
           G A  AL+  E+DV  +LA   HLG+ N +FQM++Y YKRR DG  IIN+ KTWEKL LA
Sbjct: 3   GAAHSALT--EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLA 60

Query: 275 ARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           AR I A+ENP D++V SARPY QRA+LKFA HTGA AI GR +PG  TNQ+Q +F EP
Sbjct: 61  ARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEP 118

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>RS0_PNECA (Q01661) 40S ribosomal protein S0 (Extracellular matrix receptor|
           protein)
          Length = 295

 Score =  139 bits (351), Expect = 2e-33
 Identities = 65/112 (58%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
 Frame = +2

Query: 116 SQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAI 295
           +Q   D++M+++A+ H+G++NC+ +ME Y +KRR+DG++IINLGK WEKL LAAR+IV I
Sbjct: 6   AQPAADIEMLISANCHIGSRNCELRMEPYVFKRRADGVHIINLGKRWEKLILAARIIVTI 65

Query: 296 ENPQDIIVQSARPYGQRAVLKFAQHTGA-NAIAGRHTPGTFTNQMQTSFSEP 448
           ENP DII  S+R YGQRAV K+A HTGA  AI+ R TPG+FTN +  S+ EP
Sbjct: 66  ENPTDIIAVSSRSYGQRAVHKYALHTGAREAISSRFTPGSFTNYITRSYKEP 117

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>RS0B_YEAST (P46654) 40S ribosomal protein S0-B (Nucleic acid-binding protein|
           NAB1B)
          Length = 251

 Score =  139 bits (351), Expect = 2e-33
 Identities = 64/115 (55%), Positives = 81/115 (70%)
 Frame = +2

Query: 104 PRALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARV 283
           P       +D Q++LAA+ HLG +N     E Y +  R DG+++IN+GKTWEKL LAAR+
Sbjct: 3   PATFDLTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARI 62

Query: 284 IVAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           I AI NP+D++  S+R YGQRAVLKFA HTGA  IAGR TPG+FTN +  SF EP
Sbjct: 63  IAAIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEP 117

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>RS0A_YEAST (P32905) 40S ribosomal protein S0-A (Nucleic acid-binding protein|
           NAB1A)
          Length = 251

 Score =  138 bits (347), Expect = 7e-33
 Identities = 63/115 (54%), Positives = 81/115 (70%)
 Frame = +2

Query: 104 PRALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARV 283
           P       +D Q++LAA+ HLG +N     E Y +  R DG+++IN+GKTWEKL LAAR+
Sbjct: 3   PATFDLTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARI 62

Query: 284 IVAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           I AI NP+D++  S+R +GQRAVLKFA HTGA  IAGR TPG+FTN +  SF EP
Sbjct: 63  IAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEP 117

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>RS0_CANAL (O42817) 40S ribosomal protein S0|
          Length = 253

 Score =  135 bits (341), Expect = 4e-32
 Identities = 65/115 (56%), Positives = 81/115 (70%)
 Frame = +2

Query: 104 PRALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARV 283
           P +     +D +++LAA+VHLG KN     + Y YK R DG+ IIN+GKTWEK+ LAAR+
Sbjct: 4   PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARI 63

Query: 284 IVAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           I A+ N  D+ V S+R +GQRAVLKFA HTGA AIAGR TPG FTN +  SF EP
Sbjct: 64  IAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEP 118

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>RSSA_ECHGR (P46770) 40S ribosomal protein SA (p40) (Laminin-binding protein)|
          Length = 268

 Score =  133 bits (334), Expect = 2e-31
 Identities = 60/113 (53%), Positives = 81/113 (71%)
 Frame = +2

Query: 110 ALSQKEQDVQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIV 289
           AL  KE D+++M+AA VHLG+ N ++QM++Y Y R  +G +II+L KTWEKL LAAR I 
Sbjct: 7   ALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLLAARAIC 66

Query: 290 AIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           AIENP D+++   +P  QR  LKF  +TG  ++ GR TPG FTNQ+Q+ F EP
Sbjct: 67  AIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEP 119

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>RS2_SULSO (P95993) 30S ribosomal protein S2P|
          Length = 231

 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 45/105 (42%), Positives = 71/105 (67%)
 Frame = +2

Query: 134 VQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDI 313
           V   L+A VH+GT +C   ME + Y+ R++G+Y++++ K  E+L++AA+ +   + PQDI
Sbjct: 39  VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRYD-PQDI 97

Query: 314 IVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           IV ++RPY  R V KFA+  G+ A+ GR  PGTFTN   +++ EP
Sbjct: 98  IVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEP 142

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>RS2_PYRHO (O59295) 30S ribosomal protein S2P|
          Length = 202

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 45/101 (44%), Positives = 65/101 (64%)
 Frame = +2

Query: 146 LAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQS 325
           LAA VH+GT+     M+++ Y+ R DG+Y++++ KT E+L++A + +   E PQ I+  S
Sbjct: 13  LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFE-PQSILAVS 71

Query: 326 ARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
            R YGQ+ V KF + TGA AI GR  PGT TN    +F EP
Sbjct: 72  VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEP 112

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>RS2_PYRFU (Q8U0F0) 30S ribosomal protein S2P|
          Length = 202

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 45/101 (44%), Positives = 65/101 (64%)
 Frame = +2

Query: 146 LAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQS 325
           LAA VH+GT+     M+++ Y+ R DG+Y++++ KT E+L++A + +   E PQ I+  S
Sbjct: 13  LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLAKFE-PQSILAVS 71

Query: 326 ARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
            R YGQ+ V KF + TGA AI GR  PGT TN    +F EP
Sbjct: 72  VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEP 112

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>RS2_PYRKO (Q5JJD2) 30S ribosomal protein S2P|
          Length = 201

 Score = 88.6 bits (218), Expect = 7e-18
 Identities = 44/101 (43%), Positives = 65/101 (64%)
 Frame = +2

Query: 146 LAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQS 325
           LAA VH+GT+     M+++ Y+ R DG+Y++++ KT E+L++A + +   + P+ I+  S
Sbjct: 12  LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLRVAGKFLAKFD-PESILAVS 70

Query: 326 ARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
            R YGQR V KF + TGA AI GR  PGT TN    +F EP
Sbjct: 71  VRLYGQRPVKKFGEVTGAKAIPGRFLPGTMTNPQVKNFIEP 111

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>RS2_PYRAB (Q9V191) 30S ribosomal protein S2P|
          Length = 202

 Score = 88.2 bits (217), Expect = 9e-18
 Identities = 44/101 (43%), Positives = 65/101 (64%)
 Frame = +2

Query: 146 LAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQS 325
           LAA VH+GT+     M+++ Y+ R DG+Y++++ KT E+L++A + +   + PQ I+  S
Sbjct: 13  LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVS 71

Query: 326 ARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
            R YGQ+ V KF + TGA AI GR  PGT TN    +F EP
Sbjct: 72  VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEP 112

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>RS2_METTH (O26150) 30S ribosomal protein S2P|
          Length = 198

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 44/101 (43%), Positives = 62/101 (61%)
 Frame = +2

Query: 146 LAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQS 325
           LAA +H+GT+     ME+Y Y+ RSDG+Y++++ KT +++  A++ +   E P DI+  S
Sbjct: 12  LAAGLHIGTQQKTADMEKYIYRVRSDGLYVLDIRKTNDRVIAASKFLSKYE-PDDILAVS 70

Query: 326 ARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
            R YGQ  V KF + TGA  I GR  PGT TN     F EP
Sbjct: 71  TRQYGQEPVRKFGEVTGARTIPGRFIPGTLTNPNYAKFIEP 111

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>RS2_METKA (Q8TV23) 30S ribosomal protein S2P|
          Length = 203

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 44/101 (43%), Positives = 66/101 (65%)
 Frame = +2

Query: 146 LAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQS 325
           LAA VH+GT+     ME + Y+ R+DG+++I++ KT E++++AA  + ++ N  +I+V S
Sbjct: 15  LAAGVHIGTQQKTKDMEPFIYRTRADGLHVIDVRKTDERIRIAANFL-SMYNTDEILVVS 73

Query: 326 ARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
            R YGQ+ V KFA+ TG  AI GR  PGT TN     + EP
Sbjct: 74  RRYYGQKPVSKFAEATGTTAIPGRFVPGTLTNPEYDGYLEP 114

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>RS2_METJA (P54109) 30S ribosomal protein S2P|
          Length = 222

 Score = 85.1 bits (209), Expect = 7e-17
 Identities = 44/114 (38%), Positives = 71/114 (62%), Gaps = 2/114 (1%)
 Frame = +2

Query: 113 LSQKEQDVQM--MLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVI 286
           +S+KE  V +   LA+ +H+GT+     ME++ Y+ RSDG+Y++++ KT E+L++AA+ +
Sbjct: 1   MSEKELLVPLDTYLASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFL 60

Query: 287 VAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
              E P+DI+  S R Y    + +F ++TG   +AGR  PGT TN     F EP
Sbjct: 61  ARYE-PEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEP 113

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>RS2_THEAC (P57712) 30S ribosomal protein S2P|
          Length = 199

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 43/96 (44%), Positives = 60/96 (62%)
 Frame = +2

Query: 158 VHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPY 337
           VH+GT+     M+ Y +K R+DG+YI+++ KT  KL +A +++   E PQDI+V + R Y
Sbjct: 17  VHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLARFE-PQDILVVAQRQY 75

Query: 338 GQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSE 445
             R V KFA+ TGA AI GR  PGT TN     + E
Sbjct: 76  AFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKE 111

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>RS2_THEVO (Q97BQ4) 30S ribosomal protein S2P|
          Length = 199

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 43/96 (44%), Positives = 61/96 (63%)
 Frame = +2

Query: 158 VHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPY 337
           VH+GT+     M+ Y +K R+DG+YI+++ KT  KL +AA  ++A  +PQDI+V + R Y
Sbjct: 17  VHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKL-IAAGKMLARFDPQDILVVAQRQY 75

Query: 338 GQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSE 445
             R V KFA+ TGA +I GR  PGT TN     + E
Sbjct: 76  AFRPVAKFAEVTGAVSITGRFNPGTLTNPSLKFYKE 111

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>RS2_HALSA (P57713) 30S ribosomal protein S2P|
          Length = 249

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 42/116 (36%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
 Frame = +2

Query: 113 LSQKEQD----VQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAAR 280
           +S +E D    V+  L A VH+GT+     M+R+ ++ R+DG+Y++++ +T ++++ AA 
Sbjct: 53  MSDEEADLLIPVEDYLGAGVHIGTQQKTNDMDRFIHRVRTDGLYVLDVSRTDDRVRTAAD 112

Query: 281 VIVAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
            + A  +P+ I+V S+R YG+    KFA+  GA A  GR  PGT TN     + EP
Sbjct: 113 FL-ANYDPEQILVTSSRQYGRFPAEKFAEAVGARARTGRFIPGTLTNPDYDGYIEP 167

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>RS2_SULTO (Q96YW5) 30S ribosomal protein S2P|
          Length = 225

 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 38/101 (37%), Positives = 60/101 (59%)
 Frame = +2

Query: 146 LAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQS 325
           L+A VH+GT  C   ME++ Y+ R +G+Y++++ K  E+L++AAR +     P++I+  +
Sbjct: 37  LSAGVHIGTHTCTKYMEKFVYRVRPEGLYVLDVRKIDERLRIAARFLSRF-TPENILAVT 95

Query: 326 ARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           +RPY    V KFA+     AI GR  PG  TN    +  EP
Sbjct: 96  SRPYAFTPVTKFAEVIRGRAIVGRFPPGILTNPQLPNHIEP 136

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>RS2_ARCFU (O29132) 30S ribosomal protein S2P|
          Length = 197

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 37/101 (36%), Positives = 64/101 (63%)
 Frame = +2

Query: 146 LAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQS 325
           LAA VH+GT+     M+++ +K R DG+Y++++ K  E++++AA+ +   E P  I++ +
Sbjct: 16  LAAGVHIGTQIKTGDMKKFIFKVRQDGLYVLDIRKLDERIRVAAKFLSRYE-PSKILLVA 74

Query: 326 ARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           AR Y  + V  F++  G++ I GR  PGT TN M + + EP
Sbjct: 75  ARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTNPMLSEYREP 115

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>RS2_SULAC (P39478) 30S ribosomal protein S2P|
          Length = 225

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 37/101 (36%), Positives = 61/101 (60%)
 Frame = +2

Query: 146 LAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQS 325
           L+A VH+GT  C   MER+ Y+ R +G+Y++++ K  E+L++AA+ I     P+ ++  +
Sbjct: 37  LSAGVHIGTHTCTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFISRF-RPEAVLTVA 95

Query: 326 ARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           +RPY    V KF++      I+GR  PGT TN    ++ EP
Sbjct: 96  SRPYAFTPVQKFSEVVRGKEISGRFPPGTLTNPYLDNYIEP 136

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>RS2_METMA (Q8PW41) 30S ribosomal protein S2P|
          Length = 224

 Score = 75.1 bits (183), Expect = 8e-14
 Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
 Frame = +2

Query: 110 ALSQKEQDVQMM-----LAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLA 274
           A S KE    ++     LAA VH+GT+     M R+ Y+ R+DG+Y++++  T E++++A
Sbjct: 26  AASAKEGSTSLVSIDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVA 85

Query: 275 ARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           ++ +++  +P  I+V S+R YGQ     F++  G  A+ GR  PG+ TN     F EP
Sbjct: 86  SK-LLSHYDPSRILVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEP 142

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>RS2_METAC (Q8TT39) 30S ribosomal protein S2P|
          Length = 225

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 37/101 (36%), Positives = 63/101 (62%)
 Frame = +2

Query: 146 LAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQS 325
           LAA VH+GT+     M R+ Y+ R+DG+Y++++  T E++++A++ +++  +P  I+V S
Sbjct: 44  LAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASK-LLSHYDPARILVVS 102

Query: 326 ARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           +R YGQ     F++  G  A+ GR  PG+ TN     F EP
Sbjct: 103 SRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEP 143

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>RS2_HALMA (P29202) 30S ribosomal protein S2P (HS2) (ORFMSG)|
          Length = 267

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 39/105 (37%), Positives = 61/105 (58%)
 Frame = +2

Query: 134 VQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDI 313
           V+  L A VH+GT+     MER+ ++ R+DG+Y++++  T E+++ AA  +   E P+ I
Sbjct: 82  VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYE-PEQI 140

Query: 314 IVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           +  S+R YG+    KFA+  GA    GR  PGT TN     + EP
Sbjct: 141 LAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEP 185

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>RSSA_STRPU (P46771) 40S ribosomal protein SA (p40) (34/67 kDa laminin-binding|
           protein) (Fragment)
          Length = 264

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = +2

Query: 323 SARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
           S+RPYGQRAVLKF  HTGA  +AGR+TPGTFTNQ+Q +F EP
Sbjct: 1   SSRPYGQRAVLKFGAHTGATPVAGRYTPGTFTNQIQAAFREP 42

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>RS2_PICTO (Q6L1Q0) 30S ribosomal protein S2P|
          Length = 200

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 35/96 (36%), Positives = 58/96 (60%)
 Frame = +2

Query: 158 VHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPY 337
           +H+GT+     M+ Y +K R+DG+YI+++ KT   L +A +++ A   P+ I+  + R Y
Sbjct: 18  IHIGTQIKSKDMDPYIFKIRNDGLYILDIRKTNHALIIAGKML-ARYRPEQILAVAQRQY 76

Query: 338 GQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSE 445
             R V KF++  G+ +I GR  PGT TN    ++SE
Sbjct: 77  AFRPVSKFSEVVGSKSIIGRFIPGTLTNPALPNYSE 112

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>RS2_PYRAE (Q8ZYE2) 30S ribosomal protein S2P|
          Length = 208

 Score = 62.0 bits (149), Expect = 7e-10
 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 134 VQMMLAADVHLGTKNCDFQMER--YAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQ 307
           ++  L+A V LGT+  +  +E   + +  R DG+ I ++ K  E+L++AA+ I A   P+
Sbjct: 13  LEKYLSAGVRLGTRLSNKYLEDRGFIFAVRPDGLRIFDIKKIDERLKIAAKFI-ARYRPE 71

Query: 308 DIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSE 445
            ++V + RPYG + V  F +  G  A+ GR  PGT TN     + E
Sbjct: 72  RVLVHTTRPYGFKPVQMFCKFVGCKALTGRFIPGTLTNPNLPHYQE 117

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>RS2_AERPE (Q9YB45) 30S ribosomal protein S2P|
          Length = 205

 Score = 62.0 bits (149), Expect = 7e-10
 Identities = 36/99 (36%), Positives = 52/99 (52%)
 Frame = +2

Query: 152 ADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSAR 331
           A V  GT+ C   M ++ ++   +G Y ++  K  E+L +AA+ +   E P+ I V S R
Sbjct: 18  AGVIYGTQICTRYMRQFVHRILPEGYYQLDYLKIDERLAMAAKFLSTFE-PEKIAVVSVR 76

Query: 332 PYGQRAVLKFAQHTGANAIAGRHTPGTFTNQMQTSFSEP 448
            YGQ+ V    +  G  AI GR  PGTFTN     + EP
Sbjct: 77  IYGQKPVRMMCERVGCKAITGRIIPGTFTNPNLEHYVEP 115

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>RT04_YEAST (P32902) Mitochondrial 40S ribosomal protein MRP4|
          Length = 394

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
 Frame = +2

Query: 134 VQMMLAADVHLGTKNCDFQMERYAY-KRRSDGIYIINLGKTWEKLQLAARVIVAIENPQD 310
           V+ +++A VHLG     ++    +Y      GI+II+L +T   L+ AA+V+  +     
Sbjct: 185 VESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEGVSESGG 244

Query: 311 IIVQSARPYGQ-RAVLKFAQHTGANAIAGRHTPGTFTNQMQTS 436
           II+      GQ R + + A+ T    ++ R  PGT TN  + S
Sbjct: 245 IILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEIS 287

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>RS2_THETN (Q8RA21) 30S ribosomal protein S2|
          Length = 235

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = +2

Query: 134 VQMMLAADVHLG--TKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVI-VAIENP 304
           ++ +L A VH G  T+  + +M  Y +  R+ GIYII+L +T EKL+ A   +   + + 
Sbjct: 6   MKQLLEAGVHFGHQTRRWNPKMAPYIFTERN-GIYIIDLQQTVEKLEQAYEFVKKLVMDG 64

Query: 305 QDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTN 421
             I+    +   Q ++ + A+  G   +  R   GT TN
Sbjct: 65  GTILFVGTKKQAQESIKEEAERCGMFYVNQRWLGGTLTN 103

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>RS2_CHLPN (Q9Z7K9) 30S ribosomal protein S2|
          Length = 277

 Score = 35.8 bits (81), Expect = 0.050
 Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
 Frame = +2

Query: 134 VQMMLAADVHLG--TKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLA-ARVIVAIENP 304
           ++ +++A  H G  T+  + +M+ Y ++ ++ G+YIINL KT ++L+ A   +   I++ 
Sbjct: 10  IKDLMSAGAHFGHQTRRWNPKMKLYIFEEKN-GLYIINLAKTLQQLRNALPHIRKVIQDN 68

Query: 305 QDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTN 421
           + ++    +   +  + + A   G   IA R   G  TN
Sbjct: 69  KTVLFVGTKKQAKCVIREAAIEAGEFFIAERWLGGMLTN 107

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>RS2_CHLCV (Q824U3) 30S ribosomal protein S2|
          Length = 276

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
 Frame = +2

Query: 134 VQMMLAADVHLG--TKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLA-ARVIVAIENP 304
           V+ ++ A  H G  T+  + +M+ Y ++ ++ G+YIINL KT  +L+ A   V   I+  
Sbjct: 11  VKDLMEAGAHFGHQTRRWNPKMKLYIFEEKN-GLYIINLAKTLYQLRNALPHVCKVIKEN 69

Query: 305 QDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTN 421
           + I+    +   +  + + A   G   +A R   G  TN
Sbjct: 70  KPILFVGTKKQAKCVIKEAAIEAGEYFVAERWLGGMLTN 108

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>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = +1

Query: 226  HLHHQPGQDMGEAPARCEGHRRHREPAGHHRPVRPP 333
            H HH PG+  G         RR R P    RP R P
Sbjct: 2223 HHHHHPGRGPGRVSPGVSARRRRRGPVARVRPARAP 2258

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>TMC2_HUMAN (Q8TDI7) Transmembrane cochlear-expressed protein 2|
          Length = 906

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 18/51 (35%), Positives = 20/51 (39%)
 Frame = +1

Query: 187 PDGALRLQAPLRRHLHHQPGQDMGEAPARCEGHRRHREPAGHHRPVRPPLR 339
           P    R Q   RRH      Q+ GEA   CEG R+  E A        P R
Sbjct: 66  PGSPRRKQTGRRRHREELGEQERGEAERTCEGRRKRDERASFQERTAAPKR 116

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>RS2_ONYPE (Q6YR51) 30S ribosomal protein S2|
          Length = 271

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
 Frame = +2

Query: 137 QMMLAADVHLG--TKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVIV-AIENPQ 307
           + +L + V+ G  T+  + +M+ Y +  R+ GI+IINL KT E+++ A + ++  I +  
Sbjct: 7   KQLLESGVYFGHATRKWNPKMKPYIFTSRN-GIHIINLKKTSEEIEKAYQELLNIITSGG 65

Query: 308 DIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTN 421
             +    +   Q A+ + AQ +    +  R   GT TN
Sbjct: 66  KALFLGTKKQIQSAIREEAQRSQQYYVDHRWLGGTLTN 103

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>ZNF74_HUMAN (Q16587) Zinc finger protein 74 (hZNF7)|
          Length = 643

 Score = 25.8 bits (55), Expect(2) = 1.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 72  DQPWRQRPEKPRGRCP 119
           ++PW  + E PRG CP
Sbjct: 99  EEPWSMQREVPRGPCP 114



 Score = 23.5 bits (49), Expect(2) = 1.7
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +1

Query: 193 GAL-RLQAPLRRHLHHQPGQDMGEAPARCEGHRRHREPAG 309
           GAL R QA   R   H  G+ + E P RC    + R P G
Sbjct: 154 GALQRSQAAPGRRTCHGLGRPVEEFPLRCPLFAQQRVPEG 193

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>RT02_ARATH (Q9GCB9) Mitochondrial ribosomal protein S2|
          Length = 219

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +2

Query: 134 VQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAARVI 286
           +Q +L    HLG +  +   ++YAY  R +G+ II+  KT   L+ AA  +
Sbjct: 8   IQKLLNTGAHLGRRAAEHHFKQYAYGTR-NGMTIIDSDKTLICLRSAAHFV 57

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>FOXC2_HUMAN (Q99958) Forkhead box protein C2 (Forkhead-related protein FKHL14)|
           (Mesenchyme fork head protein 1) (MFH-1 protein)
           (Transcription factor FKH-14)
          Length = 501

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/53 (32%), Positives = 20/53 (37%)
 Frame = +1

Query: 259 EAPARCEGHRRHREPAGHHRPVRPPLRPACRPQVXXXXXXXXXXXXXXPWYLH 417
           E      GH  H +  GHH P  PP  PA +PQ                WYL+
Sbjct: 379 EGALAATGH--HHQHHGHHHPQAPPPPPAPQPQPTPQPGAAAAQAAS--WYLN 427

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>RECU_LISIN (Q92AB7) Recombination protein U homolog|
          Length = 201

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
 Frame = +2

Query: 182 DFQMERYAYKRRSDGIYII-----NLGKT-----------WEKLQLAARVIVAIENPQDI 313
           D QM   A   + DGI  +      LG+T           WE++Q   R  V I   QD+
Sbjct: 119 DHQMTHMANVLKQDGIVFVIIAFQKLGETHFIPFEKFYPFWERMQSGGRKSVTISEIQDV 178

Query: 314 IVQSARPYGQRAVLKFAQ 367
             Q   PYG    L F Q
Sbjct: 179 SDQV--PYGLNPRLDFLQ 194

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>NIFD_METBA (P55170) Nitrogenase molybdenum-iron protein alpha chain (EC|
           1.18.6.1) (Nitrogenase component I) (Dinitrogenase)
          Length = 532

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 265 PARCEGHRRHREPAGHH 315
           PARCEG+R   + AGHH
Sbjct: 179 PARCEGYRGVSQSAGHH 195

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>NORM_PSEAE (Q9HTR0) Probable multidrug resistance protein norM|
           (Multidrug-efflux transporter)
          Length = 488

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -3

Query: 429 CIWLVKVPGVCLPAMALAPVCCANLRTARWP*GRAD-WTMMSCGFSMAT--MTLAASWSF 259
           C WLV VP  CL A A           A W  G A  W  ++ G + A   +TLA  W  
Sbjct: 399 CYWLVGVPLACLLAFA-----------AGW--GAAGVWWGLAGGLACAAIGLTLAFEWKT 445

Query: 258 SHVLPR 241
           + +LP+
Sbjct: 446 ARLLPK 451

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>LEU21_METJA (Q58409) 3-isopropylmalate dehydratase large subunit 1 (EC|
           4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM
           isomerase 1) (IPMI 1)
          Length = 420

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
 Frame = +2

Query: 218 SDGIYIINLGKTWEKLQLAARVIVAIEN----PQDIIVQSARPYGQRAVLKFAQHTGANA 385
           +D  YI   G+TW K+    RV +  +N     +DI+++  +  G+R     A   G   
Sbjct: 136 TDMAYIYATGETWIKVPKTIRVDIVGKNENVSAKDIVLRVCKEIGRRGATYMAIEYGGEV 195

Query: 386 IAGRHTPGTFT 418
           +      G  T
Sbjct: 196 VKNMDMDGRLT 206

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>RECU_LISMO (Q8Y611) Recombination protein U homolog|
          Length = 201

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
 Frame = +2

Query: 182 DFQMERYAYKRRSDGIYII-----NLGKT-----------WEKLQLAARVIVAIENPQDI 313
           D QM   A   + DGI  +      LG+T           WE++Q   R  V I   QD+
Sbjct: 119 DHQMTHMANVLKQDGIVFVIIAFQKLGETHFIPFEKFYPFWERMQSGGRKSVTIAEIQDV 178

Query: 314 IVQSARPYGQRAVLKFAQ 367
             Q   PYG    L F Q
Sbjct: 179 SDQI--PYGLNPRLDFLQ 194

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>RECU_LISMF (Q71YC4) Recombination protein U homolog|
          Length = 201

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
 Frame = +2

Query: 182 DFQMERYAYKRRSDGIYII-----NLGKT-----------WEKLQLAARVIVAIENPQDI 313
           D QM   A   + DGI  +      LG+T           WE++Q   R  V I   QD+
Sbjct: 119 DHQMTHMANVLKQDGIVFVIIAFQKLGETHFIPFEKFYPFWERMQSGGRKSVTIAEIQDV 178

Query: 314 IVQSARPYGQRAVLKFAQ 367
             Q   PYG    L F Q
Sbjct: 179 SDQI--PYGLNPRLDFLQ 194

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>JPH3_HUMAN (Q8WXH2) Junctophilin-3 (Junctophilin type 3) (JP-3)|
          Length = 748

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 317 VQSARPYGQRAVLKFAQHTGANAIAGRHTPGT 412
           V+ + PYG  AV++    T  N++   HT GT
Sbjct: 144 VRQSVPYGMAAVIRSPLRTSINSLRSEHTNGT 175

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>OTX1_HUMAN (P32242) Homeobox protein OTX1|
          Length = 354

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +1

Query: 226 HLHHQPGQDMGEAPARCEGHRRHREPAGHH 315
           H HH P Q    AP+   GH  H  P  HH
Sbjct: 256 HSHHHPHQLSPMAPSSMAGH-HHHHPHAHH 284

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>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 3)
          Length = 437

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 22/61 (36%), Positives = 26/61 (42%)
 Frame = +1

Query: 169 HQELRLPDGALRLQAPLRRHLHHQPGQDMGEAPARCEGHRRHREPAGHHRPVRPPLRPAC 348
           H   R+ DGA     P R+ L  QP       P R +  RR R    H R +R   RPA 
Sbjct: 143 HASDRVQDGA----HPRRQRLREQPRH--AGRPRRRQPPRRGRSRGTHRRHLRQAPRPAV 196

Query: 349 R 351
           R
Sbjct: 197 R 197

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>OTX1_RAT (Q63410) Homeobox protein OTX1|
          Length = 355

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +1

Query: 226 HLHHQPGQDMGEAPARCEGHRRHREPAGHH 315
           H HH P Q    AP+   GH  H  P  HH
Sbjct: 256 HSHHHPHQLSPMAPSSMAGH-HHHHPHAHH 284

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>OTX1_MOUSE (P80205) Homeobox protein OTX1|
          Length = 355

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +1

Query: 226 HLHHQPGQDMGEAPARCEGHRRHREPAGHH 315
           H HH P Q    AP+   GH  H  P  HH
Sbjct: 256 HSHHHPHQLSPMAPSSMAGH-HHHHPHAHH 284

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>YR229_MIMIV (Q5UQC4) Putative ankyrin repeat protein R229|
          Length = 307

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 308 DIIVQSARPYGQRAVLKFAQHTGANAIAGRHTP 406
           D  +Q A  YG   +++F    GAN +A R+ P
Sbjct: 227 DYAIQMACKYGYNEIVRFLVFNGANPMANRYYP 259

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>RS1_HELPJ (Q9ZKF6) 30S ribosomal protein S1|
          Length = 552

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +2

Query: 206 YKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARP-YGQRAVLKFAQHTGAN 382
           Y +  D +Y+  +    EK +L+  +   IE+P + I    +P Y  + V+   +H G  
Sbjct: 242 YYKEGDEVYVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIEHYGVF 301

Query: 383 AIAGRHTPG 409
              G    G
Sbjct: 302 VDIGNDIEG 310

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>NOP3_YEAST (Q01560) Nucleolar protein 3 (Mitochondrial targeting suppressor 1|
           protein) (Nuclear polyadenylated RNA-binding protein 1)
          Length = 414

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +1

Query: 226 HLHHQPGQDMGEAPARCEGHRRHREPAGHHR 318
           H HHQP +     P    G   H  P  HHR
Sbjct: 87  HQHHQPPEPQPYYPPPPPGEHMHGRPPMHHR 117

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>RS1_HELPY (P56008) 30S ribosomal protein S1|
          Length = 556

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +2

Query: 206 YKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARP-YGQRAVLKFAQHTGAN 382
           Y +  D +Y+  +    EK +L+  +   IE+P + I    +P Y  + V+   +H G  
Sbjct: 246 YYKEGDEVYVKAIAYDAEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIEHYGVF 305

Query: 383 AIAGRHTPG 409
              G    G
Sbjct: 306 VDIGNDIEG 314

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>IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2|
          Length = 883

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 238 QPGQDMGEAPARCEGHRRHREPAGHHRPVRPPLRPACRP 354
           +P     EA    E  R  R P G  RP  PP +PA +P
Sbjct: 211 RPPAVAAEAGDDDEAPRMIRRPGGPARPAPPPKQPAAKP 249


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,285,994
Number of Sequences: 219361
Number of extensions: 803912
Number of successful extensions: 3173
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 2979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3143
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result